data_2YAK # _entry.id 2YAK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2YAK PDBE EBI-47437 WWPDB D_1290047437 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1JKK unspecified '2.4A X-RAY STRUCTURE OF TERNARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WITH ATP ANALOGUE AND MG.' PDB 1P4F unspecified 'DEATH ASSOCIATED PROTEIN KINASE CATALYTIC DOMAIN WITH BOUNDINHIBITOR FRAGMENT' PDB 2Y0A unspecified 'STRUCTURE OF DAPK1 CONSTRUCT RESIDUES 1-304' PDB 2W4J unspecified 'X-RAY STRUCTURE OF A DAP-KINASE 2-277' PDB 2X0G unspecified 'X-RAY STRUCTURE OF A DAP-KINASE CALMODULIN COMPLEX' PDB 2Y4V unspecified 'CRYSTAL STRUCTURE OF HUMAN CALMODULIN IN COMPLEX WITH A DAP KINASE-1 MUTANT (W305Y) PEPTIDE' PDB 2W4K unspecified 'X-RAY STRUCTURE OF A DAP-KINASE 2-302' PDB 1JKT unspecified 'TETRAGONAL CRYSTAL FORM OF A CATALYTIC DOMAIN OF DEATH -ASSOCIATED PROTEIN KINASE' PDB 1IG1 unspecified '1.8A X-RAY STRUCTURE OF TERNARY COMPLEX OF A CATALYTICDOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WITH ATPANALOGUE AND MN.' PDB 2XUU unspecified 'CRYSTAL STRUCTURE OF A DAP-KINASE 1 MUTANT' PDB 1JKL unspecified '1.6A X-RAY STRUCTURE OF BINARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WITH ATP ANALOGUE' PDB 1JKS unspecified '1.5A X-RAY STRUCTURE OF APO FORM OF A CATALYTIC DOMAIN OFDEATH-ASSOCIATED PROTEIN KINASE' PDB 2XZS unspecified 'DEATH ASSOCIATED PROTEIN KINASE 1 RESIDUES 1-312' PDB 2Y4P unspecified 'DIMERIC STRUCTURE OF DAPK-1 CATALYTIC DOMAIN' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YAK _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-02-23 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Feng, L.' 1 'Geisselbrecht, Y.' 2 'Blanck, S.' 3 'Wilbuer, A.' 4 'Atilla-Gokcumen, G.E.' 5 'Filippakopoulos, P.' 6 'Kraeling, K.' 7 'Celik, M.A.' 8 'Harms, K.' 9 'Maksimoska, J.' 10 'Marmorstein, R.' 11 'Frenking, G.' 12 'Knapp, S.' 13 'Essen, L.-O.' 14 'Meggers, E.' 15 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structurally Sophisticated Octahedral Metal Complexes as Highly Selective Protein Kinase Inhibitors.' J.Am.Chem.Soc. 133 5976 ? 2011 JACSAT US 0002-7863 0004 ? 21446733 10.1021/JA1112996 1 'Targeting Large Kinase Active Site with Rigid, Bulky Octahedral Ruthenium Complexes.' J.Am.Chem.Soc. 130 15764 ? 2008 JACSAT US 0002-7863 0004 ? 18973295 10.1021/JA805555A 2 'Extremely Tight Binding of a Ruthenium Complex to Glycogen Synthase Kinase 3.' Chembiochem 9 2933 ? 2008 ? GE 1439-4227 ? ? 19035373 10.1002/CBIC.200800489 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Feng, L.' 1 primary 'Geisselbrecht, Y.' 2 primary 'Blanck, S.' 3 primary 'Wilbuer, A.' 4 primary 'Atilla-Gokcumen, G.E.' 5 primary 'Filippakopoulos, P.' 6 primary 'Kraeling, K.' 7 primary 'Celik, M.A.' 8 primary 'Harms, K.' 9 primary 'Maksimoska, J.' 10 primary 'Marmorstein, R.' 11 primary 'Frenking, G.' 12 primary 'Knapp, S.' 13 primary 'Essen, L.O.' 14 primary 'Meggers, E.' 15 1 'Maksimoska, J.' 16 1 'Feng, L.' 17 1 'Harms, K.' 18 1 'Yi, C.' 19 1 'Kissil, J.' 20 1 'Marmorstein, R.' 21 1 'Meggers, E.' 22 2 'Atilla-Gokcumen, G.E.' 23 2 'Pagano, N.' 24 2 'Streu, C.' 25 2 'Maksimoska, J.' 26 2 'Filippakopoulos, P.' 27 2 'Knapp, S.' 28 2 'Meggers, E.' 29 # _cell.entry_id 2YAK _cell.length_a 50.300 _cell.length_b 77.800 _cell.length_c 111.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YAK _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DEATH-ASSOCIATED PROTEIN KINASE 1' 32725.262 1 2.7.11.1 ? 'AA, RESIDUES 1-285' ? 2 non-polymer syn 'RUTHENIUM OCTASPORINE 4' 707.888 1 ? ? ? ? 3 water nat water 18.015 108 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HUMAN DAPK1, DAP KINASE 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII DFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALS ; _entity_poly.pdbx_seq_one_letter_code_can ;MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII DFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 VAL n 1 4 PHE n 1 5 ARG n 1 6 GLN n 1 7 GLU n 1 8 ASN n 1 9 VAL n 1 10 ASP n 1 11 ASP n 1 12 TYR n 1 13 TYR n 1 14 ASP n 1 15 THR n 1 16 GLY n 1 17 GLU n 1 18 GLU n 1 19 LEU n 1 20 GLY n 1 21 SER n 1 22 GLY n 1 23 GLN n 1 24 PHE n 1 25 ALA n 1 26 VAL n 1 27 VAL n 1 28 LYS n 1 29 LYS n 1 30 CYS n 1 31 ARG n 1 32 GLU n 1 33 LYS n 1 34 SER n 1 35 THR n 1 36 GLY n 1 37 LEU n 1 38 GLN n 1 39 TYR n 1 40 ALA n 1 41 ALA n 1 42 LYS n 1 43 PHE n 1 44 ILE n 1 45 LYS n 1 46 LYS n 1 47 ARG n 1 48 ARG n 1 49 THR n 1 50 LYS n 1 51 SER n 1 52 SER n 1 53 ARG n 1 54 ARG n 1 55 GLY n 1 56 VAL n 1 57 SER n 1 58 ARG n 1 59 GLU n 1 60 ASP n 1 61 ILE n 1 62 GLU n 1 63 ARG n 1 64 GLU n 1 65 VAL n 1 66 SER n 1 67 ILE n 1 68 LEU n 1 69 LYS n 1 70 GLU n 1 71 ILE n 1 72 GLN n 1 73 HIS n 1 74 PRO n 1 75 ASN n 1 76 VAL n 1 77 ILE n 1 78 THR n 1 79 LEU n 1 80 HIS n 1 81 GLU n 1 82 VAL n 1 83 TYR n 1 84 GLU n 1 85 ASN n 1 86 LYS n 1 87 THR n 1 88 ASP n 1 89 VAL n 1 90 ILE n 1 91 LEU n 1 92 ILE n 1 93 LEU n 1 94 GLU n 1 95 LEU n 1 96 VAL n 1 97 ALA n 1 98 GLY n 1 99 GLY n 1 100 GLU n 1 101 LEU n 1 102 PHE n 1 103 ASP n 1 104 PHE n 1 105 LEU n 1 106 ALA n 1 107 GLU n 1 108 LYS n 1 109 GLU n 1 110 SER n 1 111 LEU n 1 112 THR n 1 113 GLU n 1 114 GLU n 1 115 GLU n 1 116 ALA n 1 117 THR n 1 118 GLU n 1 119 PHE n 1 120 LEU n 1 121 LYS n 1 122 GLN n 1 123 ILE n 1 124 LEU n 1 125 ASN n 1 126 GLY n 1 127 VAL n 1 128 TYR n 1 129 TYR n 1 130 LEU n 1 131 HIS n 1 132 SER n 1 133 LEU n 1 134 GLN n 1 135 ILE n 1 136 ALA n 1 137 HIS n 1 138 PHE n 1 139 ASP n 1 140 LEU n 1 141 LYS n 1 142 PRO n 1 143 GLU n 1 144 ASN n 1 145 ILE n 1 146 MET n 1 147 LEU n 1 148 LEU n 1 149 ASP n 1 150 ARG n 1 151 ASN n 1 152 VAL n 1 153 PRO n 1 154 LYS n 1 155 PRO n 1 156 ARG n 1 157 ILE n 1 158 LYS n 1 159 ILE n 1 160 ILE n 1 161 ASP n 1 162 PHE n 1 163 GLY n 1 164 LEU n 1 165 ALA n 1 166 HIS n 1 167 LYS n 1 168 ILE n 1 169 ASP n 1 170 PHE n 1 171 GLY n 1 172 ASN n 1 173 GLU n 1 174 PHE n 1 175 LYS n 1 176 ASN n 1 177 ILE n 1 178 PHE n 1 179 GLY n 1 180 THR n 1 181 PRO n 1 182 GLU n 1 183 PHE n 1 184 VAL n 1 185 ALA n 1 186 PRO n 1 187 GLU n 1 188 ILE n 1 189 VAL n 1 190 ASN n 1 191 TYR n 1 192 GLU n 1 193 PRO n 1 194 LEU n 1 195 GLY n 1 196 LEU n 1 197 GLU n 1 198 ALA n 1 199 ASP n 1 200 MET n 1 201 TRP n 1 202 SER n 1 203 ILE n 1 204 GLY n 1 205 VAL n 1 206 ILE n 1 207 THR n 1 208 TYR n 1 209 ILE n 1 210 LEU n 1 211 LEU n 1 212 SER n 1 213 GLY n 1 214 ALA n 1 215 SER n 1 216 PRO n 1 217 PHE n 1 218 LEU n 1 219 GLY n 1 220 ASP n 1 221 THR n 1 222 LYS n 1 223 GLN n 1 224 GLU n 1 225 THR n 1 226 LEU n 1 227 ALA n 1 228 ASN n 1 229 VAL n 1 230 SER n 1 231 ALA n 1 232 VAL n 1 233 ASN n 1 234 TYR n 1 235 GLU n 1 236 PHE n 1 237 GLU n 1 238 ASP n 1 239 GLU n 1 240 TYR n 1 241 PHE n 1 242 SER n 1 243 ASN n 1 244 THR n 1 245 SER n 1 246 ALA n 1 247 LEU n 1 248 ALA n 1 249 LYS n 1 250 ASP n 1 251 PHE n 1 252 ILE n 1 253 ARG n 1 254 ARG n 1 255 LEU n 1 256 LEU n 1 257 VAL n 1 258 LYS n 1 259 ASP n 1 260 PRO n 1 261 LYS n 1 262 LYS n 1 263 ARG n 1 264 MET n 1 265 THR n 1 266 ILE n 1 267 GLN n 1 268 ASP n 1 269 SER n 1 270 LEU n 1 271 GLN n 1 272 HIS n 1 273 PRO n 1 274 TRP n 1 275 ILE n 1 276 LYS n 1 277 PRO n 1 278 LYS n 1 279 ASP n 1 280 THR n 1 281 GLN n 1 282 GLN n 1 283 ALA n 1 284 LEU n 1 285 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ROSETTA _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET151 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DAPK1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P53355 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YAK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 285 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P53355 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 285 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 285 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OSV non-polymer . 'RUTHENIUM OCTASPORINE 4' ? 'C27 H31 F N4 O3 Ru S4' 707.888 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YAK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.33 _exptl_crystal.density_percent_sol 63.11 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 MM TRIS PH 7.2, 7.5-10% PEG 6000.' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-06-28 _diffrn_detector.details 'PT COATED SI MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'HORIZONTALLY SIDE DIFFRACTING SILICON 111 CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength 0.8726 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YAK _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 24.53 _reflns.d_resolution_high 2.20 _reflns.number_obs 21538 _reflns.number_all ? _reflns.percent_possible_obs 95.1 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.90 _reflns.B_iso_Wilson_estimate 35.9 _reflns.pdbx_redundancy 5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.32 _reflns_shell.percent_possible_all 96.8 _reflns_shell.Rmerge_I_obs 0.82 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.80 _reflns_shell.pdbx_redundancy 4.6 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YAK _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20406 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.53 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 94.20 _refine.ls_R_factor_obs 0.20146 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19842 _refine.ls_R_factor_R_free 0.26043 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1109 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.904 _refine.B_iso_mean 26.688 _refine.aniso_B[1][1] -0.53 _refine.aniso_B[2][2] 0.71 _refine.aniso_B[3][3] -0.18 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. LOOPS AROUND ILE177 AND SER110 SHOW POOR ELECTRON DENSITY.' _refine.pdbx_starting_model 'IN-HOUSE STRUCTURE OF DAPK1' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.212 _refine.pdbx_overall_ESU_R_Free 0.203 _refine.overall_SU_ML 0.131 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.548 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2229 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 2377 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 24.53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.022 ? 2326 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1590 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.824 1.991 ? 3153 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.990 3.001 ? 3876 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.269 5.000 ? 278 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.596 24.643 ? 112 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.449 15.000 ? 410 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.266 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.116 0.200 ? 348 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2553 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 463 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.047 1.500 ? 1385 'X-RAY DIFFRACTION' ? r_mcbond_other 0.224 1.500 ? 558 'X-RAY DIFFRACTION' ? r_mcangle_it 1.938 2.000 ? 2241 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.830 3.000 ? 941 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.660 4.500 ? 911 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.number_reflns_R_work 1504 _refine_ls_shell.R_factor_R_work 0.320 _refine_ls_shell.percent_reflns_obs 96.35 _refine_ls_shell.R_factor_R_free 0.410 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 78 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2YAK _struct.title 'Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine ligand (OSV)' _struct.pdbx_descriptor 'DEATH-ASSOCIATED PROTEIN KINASE 1 (E.C.2.7.11.1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YAK _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'TRANSFERASE, OCTAHEDRAL RUTHENIUM INHIBITORY COMPLEX, KINASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 8 ? TYR A 12 ? ASN A 8 TYR A 12 1 ? 5 HELX_P HELX_P2 2 SER A 57 ? LYS A 69 ? SER A 57 LYS A 69 1 ? 13 HELX_P HELX_P3 3 GLU A 100 ? ALA A 106 ? GLU A 100 ALA A 106 1 ? 7 HELX_P HELX_P4 4 THR A 112 ? LEU A 133 ? THR A 112 LEU A 133 1 ? 22 HELX_P HELX_P5 5 LYS A 141 ? GLU A 143 ? LYS A 141 GLU A 143 5 ? 3 HELX_P HELX_P6 6 THR A 180 ? VAL A 184 ? THR A 180 VAL A 184 5 ? 5 HELX_P HELX_P7 7 ALA A 185 ? ASN A 190 ? ALA A 185 ASN A 190 1 ? 6 HELX_P HELX_P8 8 LEU A 196 ? GLY A 213 ? LEU A 196 GLY A 213 1 ? 18 HELX_P HELX_P9 9 THR A 221 ? VAL A 232 ? THR A 221 VAL A 232 1 ? 12 HELX_P HELX_P10 10 GLU A 237 ? SER A 242 ? GLU A 237 SER A 242 1 ? 6 HELX_P HELX_P11 11 SER A 245 ? LEU A 256 ? SER A 245 LEU A 256 1 ? 12 HELX_P HELX_P12 12 ASP A 259 ? ARG A 263 ? ASP A 259 ARG A 263 5 ? 5 HELX_P HELX_P13 13 THR A 265 ? HIS A 272 ? THR A 265 HIS A 272 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 2 ? AC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TYR A 13 ? SER A 21 ? TYR A 13 SER A 21 AA 2 ALA A 25 ? GLU A 32 ? ALA A 25 GLU A 32 AA 3 GLN A 38 ? LYS A 45 ? GLN A 38 LYS A 45 AA 4 ASP A 88 ? LEU A 93 ? ASP A 88 LEU A 93 AA 5 LEU A 79 ? GLU A 84 ? LEU A 79 GLU A 84 AB 1 ILE A 135 ? ALA A 136 ? ILE A 135 ALA A 136 AB 2 HIS A 166 ? LYS A 167 ? HIS A 166 LYS A 167 AC 1 ILE A 145 ? LEU A 147 ? ILE A 145 LEU A 147 AC 2 ILE A 157 ? ILE A 159 ? ILE A 157 ILE A 159 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 19 ? N LEU A 19 O VAL A 27 ? O VAL A 27 AA 2 3 N CYS A 30 ? N CYS A 30 O TYR A 39 ? O TYR A 39 AA 3 4 N ILE A 44 ? N ILE A 44 O VAL A 89 ? O VAL A 89 AA 4 5 O ILE A 92 ? O ILE A 92 N HIS A 80 ? N HIS A 80 AB 1 2 N ALA A 136 ? N ALA A 136 O HIS A 166 ? O HIS A 166 AC 1 2 N MET A 146 ? N MET A 146 O LYS A 158 ? O LYS A 158 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 15 _struct_site.details 'BINDING SITE FOR RESIDUE OSV A 1279' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 LEU A 19 ? LEU A 19 . ? 1_555 ? 2 AC1 15 SER A 21 ? SER A 21 . ? 1_555 ? 3 AC1 15 ALA A 25 ? ALA A 25 . ? 1_555 ? 4 AC1 15 VAL A 27 ? VAL A 27 . ? 1_555 ? 5 AC1 15 ALA A 40 ? ALA A 40 . ? 1_555 ? 6 AC1 15 LYS A 42 ? LYS A 42 . ? 1_555 ? 7 AC1 15 GLU A 64 ? GLU A 64 . ? 1_555 ? 8 AC1 15 ILE A 77 ? ILE A 77 . ? 1_555 ? 9 AC1 15 LEU A 91 ? LEU A 91 . ? 1_555 ? 10 AC1 15 LEU A 93 ? LEU A 93 . ? 1_555 ? 11 AC1 15 GLU A 94 ? GLU A 94 . ? 1_555 ? 12 AC1 15 VAL A 96 ? VAL A 96 . ? 1_555 ? 13 AC1 15 GLU A 143 ? GLU A 143 . ? 1_555 ? 14 AC1 15 ASP A 161 ? ASP A 161 . ? 1_555 ? 15 AC1 15 HOH C . ? HOH A 2064 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YAK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YAK _atom_sites.fract_transf_matrix[1][1] 0.019881 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012853 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008985 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O RU S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 PHE 119 119 119 PHE PHE A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 HIS 131 131 131 HIS HIS A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 HIS 137 137 137 HIS HIS A . n A 1 138 PHE 138 138 138 PHE PHE A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 MET 146 146 146 MET MET A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 PRO 153 153 153 PRO PRO A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 HIS 166 166 166 HIS HIS A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 PHE 170 170 170 PHE PHE A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 ASN 172 172 172 ASN ASN A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 PHE 174 174 174 PHE PHE A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 PHE 183 183 183 PHE PHE A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 ILE 188 188 188 ILE ILE A . n A 1 189 VAL 189 189 189 VAL VAL A . n A 1 190 ASN 190 190 190 ASN ASN A . n A 1 191 TYR 191 191 191 TYR TYR A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 PRO 193 193 193 PRO PRO A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 MET 200 200 200 MET MET A . n A 1 201 TRP 201 201 201 TRP TRP A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 ILE 206 206 206 ILE ILE A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 TYR 208 208 208 TYR TYR A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 PRO 216 216 216 PRO PRO A . n A 1 217 PHE 217 217 217 PHE PHE A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 ASP 220 220 220 ASP ASP A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 GLN 223 223 223 GLN GLN A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 ALA 227 227 227 ALA ALA A . n A 1 228 ASN 228 228 228 ASN ASN A . n A 1 229 VAL 229 229 229 VAL VAL A . n A 1 230 SER 230 230 230 SER SER A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 ASN 233 233 233 ASN ASN A . n A 1 234 TYR 234 234 234 TYR TYR A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 ASP 238 238 238 ASP ASP A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 TYR 240 240 240 TYR TYR A . n A 1 241 PHE 241 241 241 PHE PHE A . n A 1 242 SER 242 242 242 SER SER A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 SER 245 245 245 SER SER A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 ALA 248 248 248 ALA ALA A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 ASP 250 250 250 ASP ASP A . n A 1 251 PHE 251 251 251 PHE PHE A . n A 1 252 ILE 252 252 252 ILE ILE A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 VAL 257 257 257 VAL VAL A . n A 1 258 LYS 258 258 258 LYS LYS A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 PRO 260 260 260 PRO PRO A . n A 1 261 LYS 261 261 261 LYS LYS A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ARG 263 263 263 ARG ARG A . n A 1 264 MET 264 264 264 MET MET A . n A 1 265 THR 265 265 265 THR THR A . n A 1 266 ILE 266 266 266 ILE ILE A . n A 1 267 GLN 267 267 267 GLN GLN A . n A 1 268 ASP 268 268 268 ASP ASP A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 GLN 271 271 271 GLN GLN A . n A 1 272 HIS 272 272 272 HIS HIS A . n A 1 273 PRO 273 273 273 PRO PRO A . n A 1 274 TRP 274 274 274 TRP TRP A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 LYS 276 276 276 LYS LYS A . n A 1 277 PRO 277 277 277 PRO PRO A . n A 1 278 LYS 278 278 278 LYS LYS A . n A 1 279 ASP 279 279 ? ? ? A . n A 1 280 THR 280 280 ? ? ? A . n A 1 281 GLN 281 281 ? ? ? A . n A 1 282 GLN 282 282 ? ? ? A . n A 1 283 ALA 283 283 ? ? ? A . n A 1 284 LEU 284 284 ? ? ? A . n A 1 285 SER 285 285 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OSV 1 1279 1279 OSV OSV A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . C 3 HOH 59 2059 2059 HOH HOH A . C 3 HOH 60 2060 2060 HOH HOH A . C 3 HOH 61 2061 2061 HOH HOH A . C 3 HOH 62 2062 2062 HOH HOH A . C 3 HOH 63 2063 2063 HOH HOH A . C 3 HOH 64 2064 2064 HOH HOH A . C 3 HOH 65 2065 2065 HOH HOH A . C 3 HOH 66 2066 2066 HOH HOH A . C 3 HOH 67 2067 2067 HOH HOH A . C 3 HOH 68 2068 2068 HOH HOH A . C 3 HOH 69 2069 2069 HOH HOH A . C 3 HOH 70 2070 2070 HOH HOH A . C 3 HOH 71 2071 2071 HOH HOH A . C 3 HOH 72 2072 2072 HOH HOH A . C 3 HOH 73 2073 2073 HOH HOH A . C 3 HOH 74 2074 2074 HOH HOH A . C 3 HOH 75 2075 2075 HOH HOH A . C 3 HOH 76 2076 2076 HOH HOH A . C 3 HOH 77 2077 2077 HOH HOH A . C 3 HOH 78 2078 2078 HOH HOH A . C 3 HOH 79 2079 2079 HOH HOH A . C 3 HOH 80 2080 2080 HOH HOH A . C 3 HOH 81 2081 2081 HOH HOH A . C 3 HOH 82 2082 2082 HOH HOH A . C 3 HOH 83 2083 2083 HOH HOH A . C 3 HOH 84 2084 2084 HOH HOH A . C 3 HOH 85 2085 2085 HOH HOH A . C 3 HOH 86 2086 2086 HOH HOH A . C 3 HOH 87 2087 2087 HOH HOH A . C 3 HOH 88 2088 2088 HOH HOH A . C 3 HOH 89 2089 2089 HOH HOH A . C 3 HOH 90 2090 2090 HOH HOH A . C 3 HOH 91 2091 2091 HOH HOH A . C 3 HOH 92 2092 2092 HOH HOH A . C 3 HOH 93 2093 2093 HOH HOH A . C 3 HOH 94 2094 2094 HOH HOH A . C 3 HOH 95 2095 2095 HOH HOH A . C 3 HOH 96 2096 2096 HOH HOH A . C 3 HOH 97 2097 2097 HOH HOH A . C 3 HOH 98 2098 2098 HOH HOH A . C 3 HOH 99 2099 2099 HOH HOH A . C 3 HOH 100 2100 2100 HOH HOH A . C 3 HOH 101 2101 2101 HOH HOH A . C 3 HOH 102 2102 2102 HOH HOH A . C 3 HOH 103 2103 2103 HOH HOH A . C 3 HOH 104 2104 2104 HOH HOH A . C 3 HOH 105 2105 2105 HOH HOH A . C 3 HOH 106 2106 2106 HOH HOH A . C 3 HOH 107 2107 2107 HOH HOH A . C 3 HOH 108 2108 2108 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-27 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -10.9035 -22.5611 18.1223 0.1213 0.1012 0.0473 0.0071 0.0045 0.0134 1.2640 0.4932 1.4625 -0.6276 -0.3185 -0.3033 0.0278 -0.0638 -0.0871 0.0286 0.0416 0.0813 0.0257 0.0874 -0.0695 'X-RAY DIFFRACTION' 2 ? refined -24.9033 -4.6226 9.6531 0.0811 0.0830 0.0844 -0.0151 0.0067 -0.0135 0.2452 0.7798 0.4829 -0.2595 -0.0543 -0.0402 0.0498 0.0051 0.0201 0.0110 -0.0685 0.0139 -0.0769 0.0096 0.0186 'X-RAY DIFFRACTION' 3 ? refined -11.8980 -10.8378 16.8920 0.1922 0.2114 0.0451 0.0342 0.0021 -0.0117 9.8279 15.9870 1.9357 -9.5046 0.5882 3.0246 0.6607 -0.4069 0.4780 -0.9983 -0.6927 -0.5475 -0.1810 -0.6237 0.0320 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 74 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 75 ? ? A 278 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 1279 ? ? A 1279 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 47 ? ? CZ A ARG 47 ? ? NH1 A ARG 47 ? ? 124.02 120.30 3.72 0.50 N 2 1 NE A ARG 47 ? ? CZ A ARG 47 ? ? NH2 A ARG 47 ? ? 116.08 120.30 -4.22 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 85 ? ? -121.78 -166.38 2 1 GLU A 109 ? ? -69.06 -125.48 3 1 LEU A 111 ? ? 75.21 97.85 4 1 ASP A 139 ? ? -151.13 34.87 5 1 ASP A 161 ? ? 66.83 86.45 6 1 ASN A 176 ? ? 57.77 129.46 7 1 ILE A 177 ? ? -137.92 -48.20 8 1 PHE A 178 ? ? 47.08 95.83 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CAX _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id OSV _pdbx_validate_chiral.auth_seq_id 1279 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 3 ? CG1 ? A VAL 3 CG1 2 1 Y 1 A VAL 3 ? CG2 ? A VAL 3 CG2 3 1 Y 1 A LYS 45 ? CG ? A LYS 45 CG 4 1 Y 1 A LYS 45 ? CD ? A LYS 45 CD 5 1 Y 1 A LYS 45 ? CE ? A LYS 45 CE 6 1 Y 1 A LYS 45 ? NZ ? A LYS 45 NZ 7 1 Y 1 A LYS 86 ? CG ? A LYS 86 CG 8 1 Y 1 A LYS 86 ? CD ? A LYS 86 CD 9 1 Y 1 A LYS 86 ? CE ? A LYS 86 CE 10 1 Y 1 A LYS 86 ? NZ ? A LYS 86 NZ 11 1 Y 1 A GLU 109 ? CG ? A GLU 109 CG 12 1 Y 1 A GLU 109 ? CD ? A GLU 109 CD 13 1 Y 1 A GLU 109 ? OE1 ? A GLU 109 OE1 14 1 Y 1 A GLU 109 ? OE2 ? A GLU 109 OE2 15 1 Y 1 A LYS 278 ? CG ? A LYS 278 CG 16 1 Y 1 A LYS 278 ? CD ? A LYS 278 CD 17 1 Y 1 A LYS 278 ? CE ? A LYS 278 CE 18 1 Y 1 A LYS 278 ? NZ ? A LYS 278 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASP 279 ? A ASP 279 3 1 Y 1 A THR 280 ? A THR 280 4 1 Y 1 A GLN 281 ? A GLN 281 5 1 Y 1 A GLN 282 ? A GLN 282 6 1 Y 1 A ALA 283 ? A ALA 283 7 1 Y 1 A LEU 284 ? A LEU 284 8 1 Y 1 A SER 285 ? A SER 285 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'RUTHENIUM OCTASPORINE 4' OSV 3 water HOH #