data_2YBO # _entry.id 2YBO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YBO pdb_00002ybo 10.2210/pdb2ybo/pdb PDBE EBI-47560 ? ? WWPDB D_1290047560 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2YBQ _pdbx_database_related.content_type unspecified _pdbx_database_related.details ;THE X-RAY STRUCTURE OF THE SAM-DEPENDENT UROPORPHYRINOGEN III METHYLTRANSFERASE NIRE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH SAH AND UROPORPHYRINOGEN III ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YBO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-03-08 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Storbeck, S.' 1 'Saha, S.' 2 'Krausze, J.' 3 'Klink, B.U.' 4 'Heinz, D.W.' 5 'Layer, G.' 6 # _citation.id primary _citation.title ;Crystal Structure of the Heme D1 Biosynthesis Enzyme Nire in Complex with its Substrate Reveals New Insights Into the Catalytic Mechanism of S-Adenosyl-L-Methionine-Dependent Uroporphyrinogen III Methyltransferases. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 26754 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21632530 _citation.pdbx_database_id_DOI 10.1074/JBC.M111.239855 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Storbeck, S.' 1 ? primary 'Saha, S.' 2 ? primary 'Krausze, J.' 3 ? primary 'Klink, B.U.' 4 ? primary 'Heinz, D.W.' 5 ? primary 'Layer, G.' 6 ? # _cell.entry_id 2YBO _cell.length_a 60.900 _cell.length_b 115.100 _cell.length_c 76.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YBO _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man METHYLTRANSFERASE 31402.012 1 2.1.1.107 ? 'RESIDUES 1-279' ? 2 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 3 water nat water 18.015 195 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PROBABLE UROPORPHYRIN-III C-METHYLTRANSFERASE, UROPORPHYRINOGEN III METHYLTRANFERASE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AMADIGSMNTTVIPPSLLDVDFPAGSVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVARELIALLPESCQRIYVGKR CGHHSLPQEEINELLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQ SCTFVTGHLQNDGRLDLDWAGLARGKQTLVFYMGLGNLAEIAARLVEHGLASDTPAALVSQGTQAGQQVTRGALAELPAL ARRYQLKPPTLIVVGQVVALFAERAMAHPSYLGAGSPVSREAVACALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;AMADIGSMNTTVIPPSLLDVDFPAGSVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVARELIALLPESCQRIYVGKR CGHHSLPQEEINELLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQ SCTFVTGHLQNDGRLDLDWAGLARGKQTLVFYMGLGNLAEIAARLVEHGLASDTPAALVSQGTQAGQQVTRGALAELPAL ARRYQLKPPTLIVVGQVVALFAERAMAHPSYLGAGSPVSREAVACALEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 MET n 1 3 ALA n 1 4 ASP n 1 5 ILE n 1 6 GLY n 1 7 SER n 1 8 MET n 1 9 ASN n 1 10 THR n 1 11 THR n 1 12 VAL n 1 13 ILE n 1 14 PRO n 1 15 PRO n 1 16 SER n 1 17 LEU n 1 18 LEU n 1 19 ASP n 1 20 VAL n 1 21 ASP n 1 22 PHE n 1 23 PRO n 1 24 ALA n 1 25 GLY n 1 26 SER n 1 27 VAL n 1 28 ALA n 1 29 LEU n 1 30 VAL n 1 31 GLY n 1 32 ALA n 1 33 GLY n 1 34 PRO n 1 35 GLY n 1 36 ASP n 1 37 PRO n 1 38 GLY n 1 39 LEU n 1 40 LEU n 1 41 THR n 1 42 LEU n 1 43 ARG n 1 44 ALA n 1 45 TRP n 1 46 ALA n 1 47 LEU n 1 48 LEU n 1 49 GLN n 1 50 GLN n 1 51 ALA n 1 52 GLU n 1 53 VAL n 1 54 VAL n 1 55 VAL n 1 56 TYR n 1 57 ASP n 1 58 ARG n 1 59 LEU n 1 60 VAL n 1 61 ALA n 1 62 ARG n 1 63 GLU n 1 64 LEU n 1 65 ILE n 1 66 ALA n 1 67 LEU n 1 68 LEU n 1 69 PRO n 1 70 GLU n 1 71 SER n 1 72 CYS n 1 73 GLN n 1 74 ARG n 1 75 ILE n 1 76 TYR n 1 77 VAL n 1 78 GLY n 1 79 LYS n 1 80 ARG n 1 81 CYS n 1 82 GLY n 1 83 HIS n 1 84 HIS n 1 85 SER n 1 86 LEU n 1 87 PRO n 1 88 GLN n 1 89 GLU n 1 90 GLU n 1 91 ILE n 1 92 ASN n 1 93 GLU n 1 94 LEU n 1 95 LEU n 1 96 VAL n 1 97 ARG n 1 98 LEU n 1 99 ALA n 1 100 ARG n 1 101 GLN n 1 102 GLN n 1 103 ARG n 1 104 ARG n 1 105 VAL n 1 106 VAL n 1 107 ARG n 1 108 LEU n 1 109 LYS n 1 110 GLY n 1 111 GLY n 1 112 ASP n 1 113 PRO n 1 114 PHE n 1 115 ILE n 1 116 PHE n 1 117 GLY n 1 118 ARG n 1 119 GLY n 1 120 ALA n 1 121 GLU n 1 122 GLU n 1 123 LEU n 1 124 GLU n 1 125 ARG n 1 126 LEU n 1 127 LEU n 1 128 GLU n 1 129 ALA n 1 130 GLY n 1 131 VAL n 1 132 ASP n 1 133 CYS n 1 134 GLN n 1 135 VAL n 1 136 VAL n 1 137 PRO n 1 138 GLY n 1 139 VAL n 1 140 THR n 1 141 ALA n 1 142 ALA n 1 143 SER n 1 144 GLY n 1 145 CYS n 1 146 SER n 1 147 THR n 1 148 TYR n 1 149 ALA n 1 150 GLY n 1 151 ILE n 1 152 PRO n 1 153 LEU n 1 154 THR n 1 155 HIS n 1 156 ARG n 1 157 ASP n 1 158 LEU n 1 159 ALA n 1 160 GLN n 1 161 SER n 1 162 CYS n 1 163 THR n 1 164 PHE n 1 165 VAL n 1 166 THR n 1 167 GLY n 1 168 HIS n 1 169 LEU n 1 170 GLN n 1 171 ASN n 1 172 ASP n 1 173 GLY n 1 174 ARG n 1 175 LEU n 1 176 ASP n 1 177 LEU n 1 178 ASP n 1 179 TRP n 1 180 ALA n 1 181 GLY n 1 182 LEU n 1 183 ALA n 1 184 ARG n 1 185 GLY n 1 186 LYS n 1 187 GLN n 1 188 THR n 1 189 LEU n 1 190 VAL n 1 191 PHE n 1 192 TYR n 1 193 MET n 1 194 GLY n 1 195 LEU n 1 196 GLY n 1 197 ASN n 1 198 LEU n 1 199 ALA n 1 200 GLU n 1 201 ILE n 1 202 ALA n 1 203 ALA n 1 204 ARG n 1 205 LEU n 1 206 VAL n 1 207 GLU n 1 208 HIS n 1 209 GLY n 1 210 LEU n 1 211 ALA n 1 212 SER n 1 213 ASP n 1 214 THR n 1 215 PRO n 1 216 ALA n 1 217 ALA n 1 218 LEU n 1 219 VAL n 1 220 SER n 1 221 GLN n 1 222 GLY n 1 223 THR n 1 224 GLN n 1 225 ALA n 1 226 GLY n 1 227 GLN n 1 228 GLN n 1 229 VAL n 1 230 THR n 1 231 ARG n 1 232 GLY n 1 233 ALA n 1 234 LEU n 1 235 ALA n 1 236 GLU n 1 237 LEU n 1 238 PRO n 1 239 ALA n 1 240 LEU n 1 241 ALA n 1 242 ARG n 1 243 ARG n 1 244 TYR n 1 245 GLN n 1 246 LEU n 1 247 LYS n 1 248 PRO n 1 249 PRO n 1 250 THR n 1 251 LEU n 1 252 ILE n 1 253 VAL n 1 254 VAL n 1 255 GLY n 1 256 GLN n 1 257 VAL n 1 258 VAL n 1 259 ALA n 1 260 LEU n 1 261 PHE n 1 262 ALA n 1 263 GLU n 1 264 ARG n 1 265 ALA n 1 266 MET n 1 267 ALA n 1 268 HIS n 1 269 PRO n 1 270 SER n 1 271 TYR n 1 272 LEU n 1 273 GLY n 1 274 ALA n 1 275 GLY n 1 276 SER n 1 277 PRO n 1 278 VAL n 1 279 SER n 1 280 ARG n 1 281 GLU n 1 282 ALA n 1 283 VAL n 1 284 ALA n 1 285 CYS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 HIS n 1 290 HIS n 1 291 HIS n 1 292 HIS n 1 293 HIS n 1 294 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PAO1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PSEUDOMONAS AERUGINOSA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET32A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET32A_PRES2-4_NIRE _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code P95417_PSEAE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P95417 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YBO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 286 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P95417 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 279 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 279 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YBO ALA A 1 ? UNP P95417 ? ? 'expression tag' -6 1 1 2YBO MET A 2 ? UNP P95417 ? ? 'expression tag' -5 2 1 2YBO ALA A 3 ? UNP P95417 ? ? 'expression tag' -4 3 1 2YBO ASP A 4 ? UNP P95417 ? ? 'expression tag' -3 4 1 2YBO ILE A 5 ? UNP P95417 ? ? 'expression tag' -2 5 1 2YBO GLY A 6 ? UNP P95417 ? ? 'expression tag' -1 6 1 2YBO SER A 7 ? UNP P95417 ? ? 'expression tag' 0 7 1 2YBO LEU A 287 ? UNP P95417 ? ? 'expression tag' 280 8 1 2YBO GLU A 288 ? UNP P95417 ? ? 'expression tag' 281 9 1 2YBO HIS A 289 ? UNP P95417 ? ? 'expression tag' 282 10 1 2YBO HIS A 290 ? UNP P95417 ? ? 'expression tag' 283 11 1 2YBO HIS A 291 ? UNP P95417 ? ? 'expression tag' 284 12 1 2YBO HIS A 292 ? UNP P95417 ? ? 'expression tag' 285 13 1 2YBO HIS A 293 ? UNP P95417 ? ? 'expression tag' 286 14 1 2YBO HIS A 294 ? UNP P95417 ? ? 'expression tag' 287 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YBO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_percent_sol 46.4 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PROTEIN WAS CRYSTALLIZED FROM 24% PEG 6000, 0.1 M TRIS PH 8.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU CCD' _diffrn_detector.pdbx_collection_date 2009-10-22 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YBO _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 46.31 _reflns.d_resolution_high 2.00 _reflns.number_obs 19360 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.19 _reflns.B_iso_Wilson_estimate 35.1 _reflns.pdbx_redundancy 4.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.05 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.59 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.58 _reflns_shell.pdbx_redundancy 4.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YBO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 18294 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.915 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 98.281 _refine.ls_R_factor_obs 0.238 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2349 _refine.ls_R_factor_R_free 0.2868 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 915 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.915 _refine.correlation_coeff_Fo_to_Fc_free 0.853 _refine.B_iso_mean 14.459 _refine.aniso_B[1][1] 0.638 _refine.aniso_B[2][2] -0.370 _refine.aniso_B[3][3] -0.268 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'BABINET MODEL PLUS MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1S4D' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.231 _refine.pdbx_overall_ESU_R_Free 0.203 _refine.overall_SU_ML 0.155 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 12.098 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1858 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 195 _refine_hist.number_atoms_total 2079 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 26.915 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1923 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.333 1.999 ? 2618 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.587 5.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.248 23.250 ? 80 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.532 15.000 ? 302 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.313 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.082 0.200 ? 309 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1447 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.211 0.200 ? 997 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.310 0.200 ? 1303 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.160 0.200 ? 197 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.194 0.200 ? 99 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.226 0.200 ? 34 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.673 1.500 ? 1232 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.210 2.000 ? 1960 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.664 3.000 ? 691 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.693 4.500 ? 658 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.0 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 1236 _refine_ls_shell.R_factor_R_work 0.291 _refine_ls_shell.percent_reflns_obs 97.09 _refine_ls_shell.R_factor_R_free 0.355 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2YBO _struct.title ;The x-ray structure of the SAM-dependent uroporphyrinogen III methyltransferase NirE from Pseudomonas aeruginosa in complex with SAH ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YBO _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'SUMT, TRANSFERASE, NIRE, HEME D1 BIOSYNTHESIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 36 ? LEU A 40 ? ASP A 29 LEU A 33 5 ? 5 HELX_P HELX_P2 2 THR A 41 ? GLN A 49 ? THR A 34 GLN A 42 1 ? 9 HELX_P HELX_P3 3 ALA A 61 ? LEU A 68 ? ALA A 54 LEU A 61 1 ? 8 HELX_P HELX_P4 4 PRO A 87 ? GLN A 101 ? PRO A 80 GLN A 94 1 ? 15 HELX_P HELX_P5 5 ARG A 118 ? ALA A 129 ? ARG A 111 ALA A 122 1 ? 12 HELX_P HELX_P6 6 THR A 140 ? ALA A 149 ? THR A 133 ALA A 142 1 ? 10 HELX_P HELX_P7 7 ASP A 178 ? ALA A 183 ? ASP A 171 ALA A 176 1 ? 6 HELX_P HELX_P8 8 GLY A 194 ? GLY A 196 ? GLY A 187 GLY A 189 5 ? 3 HELX_P HELX_P9 9 ASN A 197 ? HIS A 208 ? ASN A 190 HIS A 201 1 ? 12 HELX_P HELX_P10 10 GLU A 236 ? TYR A 244 ? GLU A 229 TYR A 237 1 ? 9 HELX_P HELX_P11 11 GLN A 256 ? PHE A 261 ? GLN A 249 PHE A 254 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 248 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 241 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 249 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 242 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -8.40 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLN A 73 ? TYR A 76 ? GLN A 66 TYR A 69 AA 2 VAL A 53 ? TYR A 56 ? VAL A 46 TYR A 49 AA 3 VAL A 105 ? GLY A 110 ? VAL A 98 GLY A 103 AA 4 VAL A 27 ? GLY A 33 ? VAL A 20 GLY A 26 AA 5 CYS A 133 ? VAL A 136 ? CYS A 126 VAL A 129 AB 1 CYS A 162 ? THR A 166 ? CYS A 155 THR A 159 AB 2 THR A 188 ? TYR A 192 ? THR A 181 TYR A 185 AB 3 THR A 250 ? VAL A 254 ? THR A 243 VAL A 247 AB 4 PRO A 215 ? SER A 220 ? PRO A 208 SER A 213 AB 5 GLN A 228 ? ALA A 233 ? GLN A 221 ALA A 226 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 75 ? N ILE A 68 O VAL A 54 ? O VAL A 47 AA 2 3 N VAL A 55 ? N VAL A 48 O VAL A 106 ? O VAL A 99 AA 3 4 N ARG A 107 ? N ARG A 100 O ALA A 28 ? O ALA A 21 AA 4 5 N LEU A 29 ? N LEU A 22 O GLN A 134 ? O GLN A 127 AB 1 2 N THR A 163 ? N THR A 156 O THR A 188 ? O THR A 181 AB 2 3 N PHE A 191 ? N PHE A 184 O ILE A 252 ? O ILE A 245 AB 3 4 N VAL A 253 ? N VAL A 246 O ALA A 217 ? O ALA A 210 AB 4 5 N SER A 220 ? N SER A 213 O GLN A 228 ? O GLN A 221 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SAH _struct_site.pdbx_auth_seq_id 1267 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 22 _struct_site.details 'BINDING SITE FOR RESIDUE SAH A 1267' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 PRO A 34 ? PRO A 27 . ? 1_555 ? 2 AC1 22 LEU A 59 ? LEU A 52 . ? 1_555 ? 3 AC1 22 GLY A 110 ? GLY A 103 . ? 1_555 ? 4 AC1 22 GLY A 111 ? GLY A 104 . ? 1_555 ? 5 AC1 22 ASP A 112 ? ASP A 105 . ? 1_555 ? 6 AC1 22 ILE A 115 ? ILE A 108 . ? 1_555 ? 7 AC1 22 PHE A 116 ? PHE A 109 . ? 1_555 ? 8 AC1 22 THR A 140 ? THR A 133 . ? 1_555 ? 9 AC1 22 ALA A 141 ? ALA A 134 . ? 1_555 ? 10 AC1 22 CYS A 145 ? CYS A 138 . ? 1_555 ? 11 AC1 22 TYR A 192 ? TYR A 185 . ? 1_555 ? 12 AC1 22 MET A 193 ? MET A 186 . ? 1_555 ? 13 AC1 22 VAL A 219 ? VAL A 212 . ? 1_555 ? 14 AC1 22 GLN A 221 ? GLN A 214 . ? 1_555 ? 15 AC1 22 GLY A 222 ? GLY A 215 . ? 1_555 ? 16 AC1 22 GLN A 224 ? GLN A 217 . ? 1_555 ? 17 AC1 22 PRO A 249 ? PRO A 242 . ? 1_555 ? 18 AC1 22 THR A 250 ? THR A 243 . ? 1_555 ? 19 AC1 22 LEU A 251 ? LEU A 244 . ? 1_555 ? 20 AC1 22 HOH C . ? HOH A 2022 . ? 1_555 ? 21 AC1 22 HOH C . ? HOH A 2065 . ? 1_555 ? 22 AC1 22 HOH C . ? HOH A 2195 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YBO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YBO _atom_sites.fract_transf_matrix[1][1] 0.016420 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008688 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013021 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -6 ? ? ? A . n A 1 2 MET 2 -5 ? ? ? A . n A 1 3 ALA 3 -4 ? ? ? A . n A 1 4 ASP 4 -3 ? ? ? A . n A 1 5 ILE 5 -2 ? ? ? A . n A 1 6 GLY 6 -1 ? ? ? A . n A 1 7 SER 7 0 ? ? ? A . n A 1 8 MET 8 1 ? ? ? A . n A 1 9 ASN 9 2 ? ? ? A . n A 1 10 THR 10 3 ? ? ? A . n A 1 11 THR 11 4 ? ? ? A . n A 1 12 VAL 12 5 ? ? ? A . n A 1 13 ILE 13 6 ? ? ? A . n A 1 14 PRO 14 7 ? ? ? A . n A 1 15 PRO 15 8 ? ? ? A . n A 1 16 SER 16 9 ? ? ? A . n A 1 17 LEU 17 10 ? ? ? A . n A 1 18 LEU 18 11 11 LEU LEU A . n A 1 19 ASP 19 12 12 ASP ASP A . n A 1 20 VAL 20 13 13 VAL VAL A . n A 1 21 ASP 21 14 14 ASP ASP A . n A 1 22 PHE 22 15 15 PHE PHE A . n A 1 23 PRO 23 16 16 PRO PRO A . n A 1 24 ALA 24 17 17 ALA ALA A . n A 1 25 GLY 25 18 18 GLY GLY A . n A 1 26 SER 26 19 19 SER SER A . n A 1 27 VAL 27 20 20 VAL VAL A . n A 1 28 ALA 28 21 21 ALA ALA A . n A 1 29 LEU 29 22 22 LEU LEU A . n A 1 30 VAL 30 23 23 VAL VAL A . n A 1 31 GLY 31 24 24 GLY GLY A . n A 1 32 ALA 32 25 25 ALA ALA A . n A 1 33 GLY 33 26 26 GLY GLY A . n A 1 34 PRO 34 27 27 PRO PRO A . n A 1 35 GLY 35 28 28 GLY GLY A . n A 1 36 ASP 36 29 29 ASP ASP A . n A 1 37 PRO 37 30 30 PRO PRO A . n A 1 38 GLY 38 31 31 GLY GLY A . n A 1 39 LEU 39 32 32 LEU LEU A . n A 1 40 LEU 40 33 33 LEU LEU A . n A 1 41 THR 41 34 34 THR THR A . n A 1 42 LEU 42 35 35 LEU LEU A . n A 1 43 ARG 43 36 36 ARG ARG A . n A 1 44 ALA 44 37 37 ALA ALA A . n A 1 45 TRP 45 38 38 TRP TRP A . n A 1 46 ALA 46 39 39 ALA ALA A . n A 1 47 LEU 47 40 40 LEU LEU A . n A 1 48 LEU 48 41 41 LEU LEU A . n A 1 49 GLN 49 42 42 GLN GLN A . n A 1 50 GLN 50 43 43 GLN GLN A . n A 1 51 ALA 51 44 44 ALA ALA A . n A 1 52 GLU 52 45 45 GLU GLU A . n A 1 53 VAL 53 46 46 VAL VAL A . n A 1 54 VAL 54 47 47 VAL VAL A . n A 1 55 VAL 55 48 48 VAL VAL A . n A 1 56 TYR 56 49 49 TYR TYR A . n A 1 57 ASP 57 50 50 ASP ASP A . n A 1 58 ARG 58 51 51 ARG ARG A . n A 1 59 LEU 59 52 52 LEU LEU A . n A 1 60 VAL 60 53 53 VAL VAL A . n A 1 61 ALA 61 54 54 ALA ALA A . n A 1 62 ARG 62 55 55 ARG ARG A . n A 1 63 GLU 63 56 56 GLU GLU A . n A 1 64 LEU 64 57 57 LEU LEU A . n A 1 65 ILE 65 58 58 ILE ILE A . n A 1 66 ALA 66 59 59 ALA ALA A . n A 1 67 LEU 67 60 60 LEU LEU A . n A 1 68 LEU 68 61 61 LEU LEU A . n A 1 69 PRO 69 62 62 PRO PRO A . n A 1 70 GLU 70 63 63 GLU GLU A . n A 1 71 SER 71 64 64 SER SER A . n A 1 72 CYS 72 65 65 CYS CYS A . n A 1 73 GLN 73 66 66 GLN GLN A . n A 1 74 ARG 74 67 67 ARG ARG A . n A 1 75 ILE 75 68 68 ILE ILE A . n A 1 76 TYR 76 69 69 TYR TYR A . n A 1 77 VAL 77 70 70 VAL VAL A . n A 1 78 GLY 78 71 71 GLY GLY A . n A 1 79 LYS 79 72 ? ? ? A . n A 1 80 ARG 80 73 ? ? ? A . n A 1 81 CYS 81 74 ? ? ? A . n A 1 82 GLY 82 75 ? ? ? A . n A 1 83 HIS 83 76 ? ? ? A . n A 1 84 HIS 84 77 ? ? ? A . n A 1 85 SER 85 78 ? ? ? A . n A 1 86 LEU 86 79 ? ? ? A . n A 1 87 PRO 87 80 80 PRO PRO A . n A 1 88 GLN 88 81 81 GLN GLN A . n A 1 89 GLU 89 82 82 GLU GLU A . n A 1 90 GLU 90 83 83 GLU GLU A . n A 1 91 ILE 91 84 84 ILE ILE A . n A 1 92 ASN 92 85 85 ASN ASN A . n A 1 93 GLU 93 86 86 GLU GLU A . n A 1 94 LEU 94 87 87 LEU LEU A . n A 1 95 LEU 95 88 88 LEU LEU A . n A 1 96 VAL 96 89 89 VAL VAL A . n A 1 97 ARG 97 90 90 ARG ARG A . n A 1 98 LEU 98 91 91 LEU LEU A . n A 1 99 ALA 99 92 92 ALA ALA A . n A 1 100 ARG 100 93 93 ARG ARG A . n A 1 101 GLN 101 94 94 GLN GLN A . n A 1 102 GLN 102 95 95 GLN GLN A . n A 1 103 ARG 103 96 96 ARG ARG A . n A 1 104 ARG 104 97 97 ARG ARG A . n A 1 105 VAL 105 98 98 VAL VAL A . n A 1 106 VAL 106 99 99 VAL VAL A . n A 1 107 ARG 107 100 100 ARG ARG A . n A 1 108 LEU 108 101 101 LEU LEU A . n A 1 109 LYS 109 102 102 LYS LYS A . n A 1 110 GLY 110 103 103 GLY GLY A . n A 1 111 GLY 111 104 104 GLY GLY A . n A 1 112 ASP 112 105 105 ASP ASP A . n A 1 113 PRO 113 106 106 PRO PRO A . n A 1 114 PHE 114 107 107 PHE PHE A . n A 1 115 ILE 115 108 108 ILE ILE A . n A 1 116 PHE 116 109 109 PHE PHE A . n A 1 117 GLY 117 110 110 GLY GLY A . n A 1 118 ARG 118 111 111 ARG ARG A . n A 1 119 GLY 119 112 112 GLY GLY A . n A 1 120 ALA 120 113 113 ALA ALA A . n A 1 121 GLU 121 114 114 GLU GLU A . n A 1 122 GLU 122 115 115 GLU GLU A . n A 1 123 LEU 123 116 116 LEU LEU A . n A 1 124 GLU 124 117 117 GLU GLU A . n A 1 125 ARG 125 118 118 ARG ARG A . n A 1 126 LEU 126 119 119 LEU LEU A . n A 1 127 LEU 127 120 120 LEU LEU A . n A 1 128 GLU 128 121 121 GLU GLU A . n A 1 129 ALA 129 122 122 ALA ALA A . n A 1 130 GLY 130 123 123 GLY GLY A . n A 1 131 VAL 131 124 124 VAL VAL A . n A 1 132 ASP 132 125 125 ASP ASP A . n A 1 133 CYS 133 126 126 CYS CYS A . n A 1 134 GLN 134 127 127 GLN GLN A . n A 1 135 VAL 135 128 128 VAL VAL A . n A 1 136 VAL 136 129 129 VAL VAL A . n A 1 137 PRO 137 130 130 PRO PRO A . n A 1 138 GLY 138 131 131 GLY GLY A . n A 1 139 VAL 139 132 132 VAL VAL A . n A 1 140 THR 140 133 133 THR THR A . n A 1 141 ALA 141 134 134 ALA ALA A . n A 1 142 ALA 142 135 135 ALA ALA A . n A 1 143 SER 143 136 136 SER SER A . n A 1 144 GLY 144 137 137 GLY GLY A . n A 1 145 CYS 145 138 138 CYS CYS A . n A 1 146 SER 146 139 139 SER SER A . n A 1 147 THR 147 140 140 THR THR A . n A 1 148 TYR 148 141 141 TYR TYR A . n A 1 149 ALA 149 142 142 ALA ALA A . n A 1 150 GLY 150 143 143 GLY GLY A . n A 1 151 ILE 151 144 144 ILE ILE A . n A 1 152 PRO 152 145 145 PRO PRO A . n A 1 153 LEU 153 146 146 LEU LEU A . n A 1 154 THR 154 147 147 THR THR A . n A 1 155 HIS 155 148 148 HIS HIS A . n A 1 156 ARG 156 149 149 ARG ARG A . n A 1 157 ASP 157 150 150 ASP ASP A . n A 1 158 LEU 158 151 151 LEU LEU A . n A 1 159 ALA 159 152 152 ALA ALA A . n A 1 160 GLN 160 153 153 GLN GLN A . n A 1 161 SER 161 154 154 SER SER A . n A 1 162 CYS 162 155 155 CYS CYS A . n A 1 163 THR 163 156 156 THR THR A . n A 1 164 PHE 164 157 157 PHE PHE A . n A 1 165 VAL 165 158 158 VAL VAL A . n A 1 166 THR 166 159 159 THR THR A . n A 1 167 GLY 167 160 160 GLY GLY A . n A 1 168 HIS 168 161 161 HIS HIS A . n A 1 169 LEU 169 162 162 LEU LEU A . n A 1 170 GLN 170 163 163 GLN GLN A . n A 1 171 ASN 171 164 164 ASN ASN A . n A 1 172 ASP 172 165 165 ASP ASP A . n A 1 173 GLY 173 166 166 GLY GLY A . n A 1 174 ARG 174 167 167 ARG ARG A . n A 1 175 LEU 175 168 168 LEU LEU A . n A 1 176 ASP 176 169 169 ASP ASP A . n A 1 177 LEU 177 170 170 LEU LEU A . n A 1 178 ASP 178 171 171 ASP ASP A . n A 1 179 TRP 179 172 172 TRP TRP A . n A 1 180 ALA 180 173 173 ALA ALA A . n A 1 181 GLY 181 174 174 GLY GLY A . n A 1 182 LEU 182 175 175 LEU LEU A . n A 1 183 ALA 183 176 176 ALA ALA A . n A 1 184 ARG 184 177 177 ARG ARG A . n A 1 185 GLY 185 178 178 GLY GLY A . n A 1 186 LYS 186 179 179 LYS LYS A . n A 1 187 GLN 187 180 180 GLN GLN A . n A 1 188 THR 188 181 181 THR THR A . n A 1 189 LEU 189 182 182 LEU LEU A . n A 1 190 VAL 190 183 183 VAL VAL A . n A 1 191 PHE 191 184 184 PHE PHE A . n A 1 192 TYR 192 185 185 TYR TYR A . n A 1 193 MET 193 186 186 MET MET A . n A 1 194 GLY 194 187 187 GLY GLY A . n A 1 195 LEU 195 188 188 LEU LEU A . n A 1 196 GLY 196 189 189 GLY GLY A . n A 1 197 ASN 197 190 190 ASN ASN A . n A 1 198 LEU 198 191 191 LEU LEU A . n A 1 199 ALA 199 192 192 ALA ALA A . n A 1 200 GLU 200 193 193 GLU GLU A . n A 1 201 ILE 201 194 194 ILE ILE A . n A 1 202 ALA 202 195 195 ALA ALA A . n A 1 203 ALA 203 196 196 ALA ALA A . n A 1 204 ARG 204 197 197 ARG ARG A . n A 1 205 LEU 205 198 198 LEU LEU A . n A 1 206 VAL 206 199 199 VAL VAL A . n A 1 207 GLU 207 200 200 GLU GLU A . n A 1 208 HIS 208 201 201 HIS HIS A . n A 1 209 GLY 209 202 202 GLY GLY A . n A 1 210 LEU 210 203 203 LEU LEU A . n A 1 211 ALA 211 204 204 ALA ALA A . n A 1 212 SER 212 205 205 SER SER A . n A 1 213 ASP 213 206 206 ASP ASP A . n A 1 214 THR 214 207 207 THR THR A . n A 1 215 PRO 215 208 208 PRO PRO A . n A 1 216 ALA 216 209 209 ALA ALA A . n A 1 217 ALA 217 210 210 ALA ALA A . n A 1 218 LEU 218 211 211 LEU LEU A . n A 1 219 VAL 219 212 212 VAL VAL A . n A 1 220 SER 220 213 213 SER SER A . n A 1 221 GLN 221 214 214 GLN GLN A . n A 1 222 GLY 222 215 215 GLY GLY A . n A 1 223 THR 223 216 216 THR THR A . n A 1 224 GLN 224 217 217 GLN GLN A . n A 1 225 ALA 225 218 218 ALA ALA A . n A 1 226 GLY 226 219 219 GLY GLY A . n A 1 227 GLN 227 220 220 GLN GLN A . n A 1 228 GLN 228 221 221 GLN GLN A . n A 1 229 VAL 229 222 222 VAL VAL A . n A 1 230 THR 230 223 223 THR THR A . n A 1 231 ARG 231 224 224 ARG ARG A . n A 1 232 GLY 232 225 225 GLY GLY A . n A 1 233 ALA 233 226 226 ALA ALA A . n A 1 234 LEU 234 227 227 LEU LEU A . n A 1 235 ALA 235 228 228 ALA ALA A . n A 1 236 GLU 236 229 229 GLU GLU A . n A 1 237 LEU 237 230 230 LEU LEU A . n A 1 238 PRO 238 231 231 PRO PRO A . n A 1 239 ALA 239 232 232 ALA ALA A . n A 1 240 LEU 240 233 233 LEU LEU A . n A 1 241 ALA 241 234 234 ALA ALA A . n A 1 242 ARG 242 235 235 ARG ARG A . n A 1 243 ARG 243 236 236 ARG ARG A . n A 1 244 TYR 244 237 237 TYR TYR A . n A 1 245 GLN 245 238 238 GLN GLN A . n A 1 246 LEU 246 239 239 LEU LEU A . n A 1 247 LYS 247 240 240 LYS LYS A . n A 1 248 PRO 248 241 241 PRO PRO A . n A 1 249 PRO 249 242 242 PRO PRO A . n A 1 250 THR 250 243 243 THR THR A . n A 1 251 LEU 251 244 244 LEU LEU A . n A 1 252 ILE 252 245 245 ILE ILE A . n A 1 253 VAL 253 246 246 VAL VAL A . n A 1 254 VAL 254 247 247 VAL VAL A . n A 1 255 GLY 255 248 248 GLY GLY A . n A 1 256 GLN 256 249 249 GLN GLN A . n A 1 257 VAL 257 250 250 VAL VAL A . n A 1 258 VAL 258 251 251 VAL VAL A . n A 1 259 ALA 259 252 252 ALA ALA A . n A 1 260 LEU 260 253 253 LEU LEU A . n A 1 261 PHE 261 254 254 PHE PHE A . n A 1 262 ALA 262 255 255 ALA ALA A . n A 1 263 GLU 263 256 256 GLU GLU A . n A 1 264 ARG 264 257 257 ARG ARG A . n A 1 265 ALA 265 258 258 ALA ALA A . n A 1 266 MET 266 259 259 MET MET A . n A 1 267 ALA 267 260 260 ALA ALA A . n A 1 268 HIS 268 261 261 HIS HIS A . n A 1 269 PRO 269 262 262 PRO PRO A . n A 1 270 SER 270 263 263 SER SER A . n A 1 271 TYR 271 264 264 TYR TYR A . n A 1 272 LEU 272 265 265 LEU LEU A . n A 1 273 GLY 273 266 266 GLY GLY A . n A 1 274 ALA 274 267 ? ? ? A . n A 1 275 GLY 275 268 ? ? ? A . n A 1 276 SER 276 269 ? ? ? A . n A 1 277 PRO 277 270 ? ? ? A . n A 1 278 VAL 278 271 ? ? ? A . n A 1 279 SER 279 272 ? ? ? A . n A 1 280 ARG 280 273 ? ? ? A . n A 1 281 GLU 281 274 ? ? ? A . n A 1 282 ALA 282 275 ? ? ? A . n A 1 283 VAL 283 276 ? ? ? A . n A 1 284 ALA 284 277 ? ? ? A . n A 1 285 CYS 285 278 ? ? ? A . n A 1 286 ALA 286 279 ? ? ? A . n A 1 287 LEU 287 280 ? ? ? A . n A 1 288 GLU 288 281 ? ? ? A . n A 1 289 HIS 289 282 ? ? ? A . n A 1 290 HIS 290 283 ? ? ? A . n A 1 291 HIS 291 284 ? ? ? A . n A 1 292 HIS 292 285 ? ? ? A . n A 1 293 HIS 293 286 ? ? ? A . n A 1 294 HIS 294 287 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH 1 1267 1267 SAH SAH A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . C 3 HOH 59 2059 2059 HOH HOH A . C 3 HOH 60 2060 2060 HOH HOH A . C 3 HOH 61 2061 2061 HOH HOH A . C 3 HOH 62 2062 2062 HOH HOH A . C 3 HOH 63 2063 2063 HOH HOH A . C 3 HOH 64 2064 2064 HOH HOH A . C 3 HOH 65 2065 2065 HOH HOH A . C 3 HOH 66 2066 2066 HOH HOH A . C 3 HOH 67 2067 2067 HOH HOH A . C 3 HOH 68 2068 2068 HOH HOH A . C 3 HOH 69 2069 2069 HOH HOH A . C 3 HOH 70 2070 2070 HOH HOH A . C 3 HOH 71 2071 2071 HOH HOH A . C 3 HOH 72 2072 2072 HOH HOH A . C 3 HOH 73 2073 2073 HOH HOH A . C 3 HOH 74 2074 2074 HOH HOH A . C 3 HOH 75 2075 2075 HOH HOH A . C 3 HOH 76 2076 2076 HOH HOH A . C 3 HOH 77 2077 2077 HOH HOH A . C 3 HOH 78 2078 2078 HOH HOH A . C 3 HOH 79 2079 2079 HOH HOH A . C 3 HOH 80 2080 2080 HOH HOH A . C 3 HOH 81 2081 2081 HOH HOH A . C 3 HOH 82 2082 2082 HOH HOH A . C 3 HOH 83 2083 2083 HOH HOH A . C 3 HOH 84 2084 2084 HOH HOH A . C 3 HOH 85 2085 2085 HOH HOH A . C 3 HOH 86 2086 2086 HOH HOH A . C 3 HOH 87 2087 2087 HOH HOH A . C 3 HOH 88 2088 2088 HOH HOH A . C 3 HOH 89 2089 2089 HOH HOH A . C 3 HOH 90 2090 2090 HOH HOH A . C 3 HOH 91 2091 2091 HOH HOH A . C 3 HOH 92 2092 2092 HOH HOH A . C 3 HOH 93 2093 2093 HOH HOH A . C 3 HOH 94 2094 2094 HOH HOH A . C 3 HOH 95 2095 2095 HOH HOH A . C 3 HOH 96 2096 2096 HOH HOH A . C 3 HOH 97 2097 2097 HOH HOH A . C 3 HOH 98 2098 2098 HOH HOH A . C 3 HOH 99 2099 2099 HOH HOH A . C 3 HOH 100 2100 2100 HOH HOH A . C 3 HOH 101 2101 2101 HOH HOH A . C 3 HOH 102 2102 2102 HOH HOH A . C 3 HOH 103 2103 2103 HOH HOH A . C 3 HOH 104 2104 2104 HOH HOH A . C 3 HOH 105 2105 2105 HOH HOH A . C 3 HOH 106 2106 2106 HOH HOH A . C 3 HOH 107 2107 2107 HOH HOH A . C 3 HOH 108 2108 2108 HOH HOH A . C 3 HOH 109 2109 2109 HOH HOH A . C 3 HOH 110 2110 2110 HOH HOH A . C 3 HOH 111 2111 2111 HOH HOH A . C 3 HOH 112 2112 2112 HOH HOH A . C 3 HOH 113 2113 2113 HOH HOH A . C 3 HOH 114 2114 2114 HOH HOH A . C 3 HOH 115 2115 2115 HOH HOH A . C 3 HOH 116 2116 2116 HOH HOH A . C 3 HOH 117 2117 2117 HOH HOH A . C 3 HOH 118 2118 2118 HOH HOH A . C 3 HOH 119 2119 2119 HOH HOH A . C 3 HOH 120 2120 2120 HOH HOH A . C 3 HOH 121 2121 2121 HOH HOH A . C 3 HOH 122 2122 2122 HOH HOH A . C 3 HOH 123 2123 2123 HOH HOH A . C 3 HOH 124 2124 2124 HOH HOH A . C 3 HOH 125 2125 2125 HOH HOH A . C 3 HOH 126 2126 2126 HOH HOH A . C 3 HOH 127 2127 2127 HOH HOH A . C 3 HOH 128 2128 2128 HOH HOH A . C 3 HOH 129 2129 2129 HOH HOH A . C 3 HOH 130 2130 2130 HOH HOH A . C 3 HOH 131 2131 2131 HOH HOH A . C 3 HOH 132 2132 2132 HOH HOH A . C 3 HOH 133 2133 2133 HOH HOH A . C 3 HOH 134 2134 2134 HOH HOH A . C 3 HOH 135 2135 2135 HOH HOH A . C 3 HOH 136 2136 2136 HOH HOH A . C 3 HOH 137 2137 2137 HOH HOH A . C 3 HOH 138 2138 2138 HOH HOH A . C 3 HOH 139 2139 2139 HOH HOH A . C 3 HOH 140 2140 2140 HOH HOH A . C 3 HOH 141 2141 2141 HOH HOH A . C 3 HOH 142 2142 2142 HOH HOH A . C 3 HOH 143 2143 2143 HOH HOH A . C 3 HOH 144 2144 2144 HOH HOH A . C 3 HOH 145 2145 2145 HOH HOH A . C 3 HOH 146 2146 2146 HOH HOH A . C 3 HOH 147 2147 2147 HOH HOH A . C 3 HOH 148 2148 2148 HOH HOH A . C 3 HOH 149 2149 2149 HOH HOH A . C 3 HOH 150 2150 2150 HOH HOH A . C 3 HOH 151 2151 2151 HOH HOH A . C 3 HOH 152 2152 2152 HOH HOH A . C 3 HOH 153 2153 2153 HOH HOH A . C 3 HOH 154 2154 2154 HOH HOH A . C 3 HOH 155 2155 2155 HOH HOH A . C 3 HOH 156 2156 2156 HOH HOH A . C 3 HOH 157 2157 2157 HOH HOH A . C 3 HOH 158 2158 2158 HOH HOH A . C 3 HOH 159 2159 2159 HOH HOH A . C 3 HOH 160 2160 2160 HOH HOH A . C 3 HOH 161 2161 2161 HOH HOH A . C 3 HOH 162 2162 2162 HOH HOH A . C 3 HOH 163 2163 2163 HOH HOH A . C 3 HOH 164 2164 2164 HOH HOH A . C 3 HOH 165 2165 2165 HOH HOH A . C 3 HOH 166 2166 2166 HOH HOH A . C 3 HOH 167 2167 2167 HOH HOH A . C 3 HOH 168 2168 2168 HOH HOH A . C 3 HOH 169 2169 2169 HOH HOH A . C 3 HOH 170 2170 2170 HOH HOH A . C 3 HOH 171 2171 2171 HOH HOH A . C 3 HOH 172 2172 2172 HOH HOH A . C 3 HOH 173 2173 2173 HOH HOH A . C 3 HOH 174 2174 2174 HOH HOH A . C 3 HOH 175 2175 2175 HOH HOH A . C 3 HOH 176 2176 2176 HOH HOH A . C 3 HOH 177 2177 2177 HOH HOH A . C 3 HOH 178 2178 2178 HOH HOH A . C 3 HOH 179 2179 2179 HOH HOH A . C 3 HOH 180 2180 2180 HOH HOH A . C 3 HOH 181 2181 2181 HOH HOH A . C 3 HOH 182 2182 2182 HOH HOH A . C 3 HOH 183 2183 2183 HOH HOH A . C 3 HOH 184 2184 2184 HOH HOH A . C 3 HOH 185 2185 2185 HOH HOH A . C 3 HOH 186 2186 2186 HOH HOH A . C 3 HOH 187 2187 2187 HOH HOH A . C 3 HOH 188 2188 2188 HOH HOH A . C 3 HOH 189 2189 2189 HOH HOH A . C 3 HOH 190 2190 2190 HOH HOH A . C 3 HOH 191 2191 2191 HOH HOH A . C 3 HOH 192 2192 2192 HOH HOH A . C 3 HOH 193 2193 2193 HOH HOH A . C 3 HOH 194 2194 2194 HOH HOH A . C 3 HOH 195 2195 2195 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5230 ? 1 MORE -27.4 ? 1 'SSA (A^2)' 19250 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 60.9000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 38.4000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-01 2 'Structure model' 1 1 2011-09-28 3 'Structure model' 1 2 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 16.2809 30.9404 24.3623 0.0178 0.0450 0.0188 0.0040 0.0021 -0.0170 3.1229 1.5223 1.8652 -0.9568 -0.5081 0.7871 -0.0585 -0.1065 0.0129 0.1322 -0.0398 0.0447 -0.0121 -0.0990 0.0983 'X-RAY DIFFRACTION' 2 ? refined 35.7541 12.0534 30.7636 0.0270 0.0344 0.0290 0.0060 -0.0039 0.0100 0.7219 2.1078 1.9319 0.2257 0.1067 -0.4729 0.0219 -0.0132 0.0625 0.0135 -0.0701 0.0127 -0.0030 0.0092 0.0482 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 11 ? ? A 135 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 136 ? ? A 266 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 2082 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 2082 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 2.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 111 ? ? 58.66 17.19 2 1 ALA A 152 ? ? -163.19 119.86 3 1 ASP A 169 ? ? -105.90 64.07 4 1 SER A 263 ? ? 81.03 -9.71 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2024 ? 9.01 . 2 1 O ? A HOH 2073 ? 6.62 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 55 ? CG ? A ARG 62 CG 2 1 Y 1 A ARG 55 ? CD ? A ARG 62 CD 3 1 Y 1 A ARG 55 ? NE ? A ARG 62 NE 4 1 Y 1 A ARG 55 ? CZ ? A ARG 62 CZ 5 1 Y 1 A ARG 55 ? NH1 ? A ARG 62 NH1 6 1 Y 1 A ARG 55 ? NH2 ? A ARG 62 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA -6 ? A ALA 1 2 1 Y 1 A MET -5 ? A MET 2 3 1 Y 1 A ALA -4 ? A ALA 3 4 1 Y 1 A ASP -3 ? A ASP 4 5 1 Y 1 A ILE -2 ? A ILE 5 6 1 Y 1 A GLY -1 ? A GLY 6 7 1 Y 1 A SER 0 ? A SER 7 8 1 Y 1 A MET 1 ? A MET 8 9 1 Y 1 A ASN 2 ? A ASN 9 10 1 Y 1 A THR 3 ? A THR 10 11 1 Y 1 A THR 4 ? A THR 11 12 1 Y 1 A VAL 5 ? A VAL 12 13 1 Y 1 A ILE 6 ? A ILE 13 14 1 Y 1 A PRO 7 ? A PRO 14 15 1 Y 1 A PRO 8 ? A PRO 15 16 1 Y 1 A SER 9 ? A SER 16 17 1 Y 1 A LEU 10 ? A LEU 17 18 1 Y 1 A LYS 72 ? A LYS 79 19 1 Y 1 A ARG 73 ? A ARG 80 20 1 Y 1 A CYS 74 ? A CYS 81 21 1 Y 1 A GLY 75 ? A GLY 82 22 1 Y 1 A HIS 76 ? A HIS 83 23 1 Y 1 A HIS 77 ? A HIS 84 24 1 Y 1 A SER 78 ? A SER 85 25 1 Y 1 A LEU 79 ? A LEU 86 26 1 Y 1 A ALA 267 ? A ALA 274 27 1 Y 1 A GLY 268 ? A GLY 275 28 1 Y 1 A SER 269 ? A SER 276 29 1 Y 1 A PRO 270 ? A PRO 277 30 1 Y 1 A VAL 271 ? A VAL 278 31 1 Y 1 A SER 272 ? A SER 279 32 1 Y 1 A ARG 273 ? A ARG 280 33 1 Y 1 A GLU 274 ? A GLU 281 34 1 Y 1 A ALA 275 ? A ALA 282 35 1 Y 1 A VAL 276 ? A VAL 283 36 1 Y 1 A ALA 277 ? A ALA 284 37 1 Y 1 A CYS 278 ? A CYS 285 38 1 Y 1 A ALA 279 ? A ALA 286 39 1 Y 1 A LEU 280 ? A LEU 287 40 1 Y 1 A GLU 281 ? A GLU 288 41 1 Y 1 A HIS 282 ? A HIS 289 42 1 Y 1 A HIS 283 ? A HIS 290 43 1 Y 1 A HIS 284 ? A HIS 291 44 1 Y 1 A HIS 285 ? A HIS 292 45 1 Y 1 A HIS 286 ? A HIS 293 46 1 Y 1 A HIS 287 ? A HIS 294 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SAH N N N N 290 SAH CA C N S 291 SAH CB C N N 292 SAH CG C N N 293 SAH SD S N N 294 SAH C C N N 295 SAH O O N N 296 SAH OXT O N N 297 SAH "C5'" C N N 298 SAH "C4'" C N S 299 SAH "O4'" O N N 300 SAH "C3'" C N S 301 SAH "O3'" O N N 302 SAH "C2'" C N R 303 SAH "O2'" O N N 304 SAH "C1'" C N R 305 SAH N9 N Y N 306 SAH C8 C Y N 307 SAH N7 N Y N 308 SAH C5 C Y N 309 SAH C6 C Y N 310 SAH N6 N N N 311 SAH N1 N Y N 312 SAH C2 C Y N 313 SAH N3 N Y N 314 SAH C4 C Y N 315 SAH HN1 H N N 316 SAH HN2 H N N 317 SAH HA H N N 318 SAH HB1 H N N 319 SAH HB2 H N N 320 SAH HG1 H N N 321 SAH HG2 H N N 322 SAH HXT H N N 323 SAH "H5'1" H N N 324 SAH "H5'2" H N N 325 SAH "H4'" H N N 326 SAH "H3'" H N N 327 SAH "HO3'" H N N 328 SAH "H2'" H N N 329 SAH "HO2'" H N N 330 SAH "H1'" H N N 331 SAH H8 H N N 332 SAH HN61 H N N 333 SAH HN62 H N N 334 SAH H2 H N N 335 SER N N N N 336 SER CA C N S 337 SER C C N N 338 SER O O N N 339 SER CB C N N 340 SER OG O N N 341 SER OXT O N N 342 SER H H N N 343 SER H2 H N N 344 SER HA H N N 345 SER HB2 H N N 346 SER HB3 H N N 347 SER HG H N N 348 SER HXT H N N 349 THR N N N N 350 THR CA C N S 351 THR C C N N 352 THR O O N N 353 THR CB C N R 354 THR OG1 O N N 355 THR CG2 C N N 356 THR OXT O N N 357 THR H H N N 358 THR H2 H N N 359 THR HA H N N 360 THR HB H N N 361 THR HG1 H N N 362 THR HG21 H N N 363 THR HG22 H N N 364 THR HG23 H N N 365 THR HXT H N N 366 TRP N N N N 367 TRP CA C N S 368 TRP C C N N 369 TRP O O N N 370 TRP CB C N N 371 TRP CG C Y N 372 TRP CD1 C Y N 373 TRP CD2 C Y N 374 TRP NE1 N Y N 375 TRP CE2 C Y N 376 TRP CE3 C Y N 377 TRP CZ2 C Y N 378 TRP CZ3 C Y N 379 TRP CH2 C Y N 380 TRP OXT O N N 381 TRP H H N N 382 TRP H2 H N N 383 TRP HA H N N 384 TRP HB2 H N N 385 TRP HB3 H N N 386 TRP HD1 H N N 387 TRP HE1 H N N 388 TRP HE3 H N N 389 TRP HZ2 H N N 390 TRP HZ3 H N N 391 TRP HH2 H N N 392 TRP HXT H N N 393 TYR N N N N 394 TYR CA C N S 395 TYR C C N N 396 TYR O O N N 397 TYR CB C N N 398 TYR CG C Y N 399 TYR CD1 C Y N 400 TYR CD2 C Y N 401 TYR CE1 C Y N 402 TYR CE2 C Y N 403 TYR CZ C Y N 404 TYR OH O N N 405 TYR OXT O N N 406 TYR H H N N 407 TYR H2 H N N 408 TYR HA H N N 409 TYR HB2 H N N 410 TYR HB3 H N N 411 TYR HD1 H N N 412 TYR HD2 H N N 413 TYR HE1 H N N 414 TYR HE2 H N N 415 TYR HH H N N 416 TYR HXT H N N 417 VAL N N N N 418 VAL CA C N S 419 VAL C C N N 420 VAL O O N N 421 VAL CB C N N 422 VAL CG1 C N N 423 VAL CG2 C N N 424 VAL OXT O N N 425 VAL H H N N 426 VAL H2 H N N 427 VAL HA H N N 428 VAL HB H N N 429 VAL HG11 H N N 430 VAL HG12 H N N 431 VAL HG13 H N N 432 VAL HG21 H N N 433 VAL HG22 H N N 434 VAL HG23 H N N 435 VAL HXT H N N 436 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SAH N CA sing N N 277 SAH N HN1 sing N N 278 SAH N HN2 sing N N 279 SAH CA CB sing N N 280 SAH CA C sing N N 281 SAH CA HA sing N N 282 SAH CB CG sing N N 283 SAH CB HB1 sing N N 284 SAH CB HB2 sing N N 285 SAH CG SD sing N N 286 SAH CG HG1 sing N N 287 SAH CG HG2 sing N N 288 SAH SD "C5'" sing N N 289 SAH C O doub N N 290 SAH C OXT sing N N 291 SAH OXT HXT sing N N 292 SAH "C5'" "C4'" sing N N 293 SAH "C5'" "H5'1" sing N N 294 SAH "C5'" "H5'2" sing N N 295 SAH "C4'" "O4'" sing N N 296 SAH "C4'" "C3'" sing N N 297 SAH "C4'" "H4'" sing N N 298 SAH "O4'" "C1'" sing N N 299 SAH "C3'" "O3'" sing N N 300 SAH "C3'" "C2'" sing N N 301 SAH "C3'" "H3'" sing N N 302 SAH "O3'" "HO3'" sing N N 303 SAH "C2'" "O2'" sing N N 304 SAH "C2'" "C1'" sing N N 305 SAH "C2'" "H2'" sing N N 306 SAH "O2'" "HO2'" sing N N 307 SAH "C1'" N9 sing N N 308 SAH "C1'" "H1'" sing N N 309 SAH N9 C8 sing Y N 310 SAH N9 C4 sing Y N 311 SAH C8 N7 doub Y N 312 SAH C8 H8 sing N N 313 SAH N7 C5 sing Y N 314 SAH C5 C6 sing Y N 315 SAH C5 C4 doub Y N 316 SAH C6 N6 sing N N 317 SAH C6 N1 doub Y N 318 SAH N6 HN61 sing N N 319 SAH N6 HN62 sing N N 320 SAH N1 C2 sing Y N 321 SAH C2 N3 doub Y N 322 SAH C2 H2 sing N N 323 SAH N3 C4 sing Y N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TRP N CA sing N N 354 TRP N H sing N N 355 TRP N H2 sing N N 356 TRP CA C sing N N 357 TRP CA CB sing N N 358 TRP CA HA sing N N 359 TRP C O doub N N 360 TRP C OXT sing N N 361 TRP CB CG sing N N 362 TRP CB HB2 sing N N 363 TRP CB HB3 sing N N 364 TRP CG CD1 doub Y N 365 TRP CG CD2 sing Y N 366 TRP CD1 NE1 sing Y N 367 TRP CD1 HD1 sing N N 368 TRP CD2 CE2 doub Y N 369 TRP CD2 CE3 sing Y N 370 TRP NE1 CE2 sing Y N 371 TRP NE1 HE1 sing N N 372 TRP CE2 CZ2 sing Y N 373 TRP CE3 CZ3 doub Y N 374 TRP CE3 HE3 sing N N 375 TRP CZ2 CH2 doub Y N 376 TRP CZ2 HZ2 sing N N 377 TRP CZ3 CH2 sing Y N 378 TRP CZ3 HZ3 sing N N 379 TRP CH2 HH2 sing N N 380 TRP OXT HXT sing N N 381 TYR N CA sing N N 382 TYR N H sing N N 383 TYR N H2 sing N N 384 TYR CA C sing N N 385 TYR CA CB sing N N 386 TYR CA HA sing N N 387 TYR C O doub N N 388 TYR C OXT sing N N 389 TYR CB CG sing N N 390 TYR CB HB2 sing N N 391 TYR CB HB3 sing N N 392 TYR CG CD1 doub Y N 393 TYR CG CD2 sing Y N 394 TYR CD1 CE1 sing Y N 395 TYR CD1 HD1 sing N N 396 TYR CD2 CE2 doub Y N 397 TYR CD2 HD2 sing N N 398 TYR CE1 CZ doub Y N 399 TYR CE1 HE1 sing N N 400 TYR CE2 CZ sing Y N 401 TYR CE2 HE2 sing N N 402 TYR CZ OH sing N N 403 TYR OH HH sing N N 404 TYR OXT HXT sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYL-L-HOMOCYSTEINE SAH 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1S4D _pdbx_initial_refinement_model.details 'PDB ENTRY 1S4D' #