data_2YEO # _entry.id 2YEO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YEO pdb_00002yeo 10.2210/pdb2yeo/pdb PDBE EBI-47852 ? ? WWPDB D_1290047852 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1LQH unspecified ;INSECTICIDAL ALPHA SCORPION TOXIN ISOLATED FROM THE VENOM OF SCORPION LEIURUS QUINQUESTRIATUS HEBRAEUS, NMR, MINIMIZED AVERAGE STRUCTURE ; PDB 1LQI unspecified 'INSECTICIDAL ALPHA SCORPION TOXIN ISOLATED FROM THE VENOM OF SCORPION LEIURUS QUINQUESTRIATUS HEBRAEUS, NMR, 29 STRUCTURES' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YEO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-03-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Frolow, F.' 1 'Kahn, R.' 2 'Gurevitz, M.' 3 # _citation.id primary _citation.title ;Crystal Structures of Scorpion Alpha-Toxinsmutants Reveal Conformational Constraints that Dictate Preference for Mammalian Brain Voltage-Gated Na- Channels ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Frolow, F.' 1 ? primary 'Kahn, R.' 2 ? primary 'Gurevitz, M.' 3 ? # _cell.entry_id 2YEO _cell.length_a 129.707 _cell.length_b 129.707 _cell.length_c 129.707 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YEO _symmetry.space_group_name_H-M 'F 4 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ALPHA-INSECT TOXIN LQHAIT' 7438.535 1 ? YES 'RESIDUES 20-83' 'SCORPION TOXIN' 2 non-polymer syn N,N,N-TRIMETHYLHEPTA-1,3,5-TRIYN-1-AMINIUM 146.209 1 ? ? ? ? 3 non-polymer syn 'N-(HYDROXYMETHYL)-N,N-DIMETHYLHEXAN-1-AMINIUM' 160.277 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 6 water nat water 18.015 109 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MUTANT OF NEUROTOXIN ALPHA-IT, LQH-ALPHA-IT, ALPHA-IT' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MVRDAYIAKNYNCVYECFRDAYCNELCTKNGASSGYCQWLGKYGNACWCYALPDNVPIRVPGKCR _entity_poly.pdbx_seq_one_letter_code_can MVRDAYIAKNYNCVYECFRDAYCNELCTKNGASSGYCQWLGKYGNACWCYALPDNVPIRVPGKCR _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 ARG n 1 4 ASP n 1 5 ALA n 1 6 TYR n 1 7 ILE n 1 8 ALA n 1 9 LYS n 1 10 ASN n 1 11 TYR n 1 12 ASN n 1 13 CYS n 1 14 VAL n 1 15 TYR n 1 16 GLU n 1 17 CYS n 1 18 PHE n 1 19 ARG n 1 20 ASP n 1 21 ALA n 1 22 TYR n 1 23 CYS n 1 24 ASN n 1 25 GLU n 1 26 LEU n 1 27 CYS n 1 28 THR n 1 29 LYS n 1 30 ASN n 1 31 GLY n 1 32 ALA n 1 33 SER n 1 34 SER n 1 35 GLY n 1 36 TYR n 1 37 CYS n 1 38 GLN n 1 39 TRP n 1 40 LEU n 1 41 GLY n 1 42 LYS n 1 43 TYR n 1 44 GLY n 1 45 ASN n 1 46 ALA n 1 47 CYS n 1 48 TRP n 1 49 CYS n 1 50 TYR n 1 51 ALA n 1 52 LEU n 1 53 PRO n 1 54 ASP n 1 55 ASN n 1 56 VAL n 1 57 PRO n 1 58 ILE n 1 59 ARG n 1 60 VAL n 1 61 PRO n 1 62 GLY n 1 63 LYS n 1 64 CYS n 1 65 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name SCORPION _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'LEIURUS QUINQUESTRIATUS HEBRAEUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6884 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SCXA_LEIQH _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P17728 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YEO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 65 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17728 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 83 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 65 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YEO MET A 1 ? UNP P17728 ? ? 'expression tag' 1 1 1 2YEO LEU A 40 ? UNP P17728 ALA 58 'engineered mutation' 40 2 1 2YEO ARG A 65 ? UNP P17728 HIS 83 conflict 65 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DR0 non-polymer . 'N-(HYDROXYMETHYL)-N,N-DIMETHYLHEXAN-1-AMINIUM' ? 'C9 H22 N O 1' 160.277 DR8 non-polymer . N,N,N-TRIMETHYLHEPTA-1,3,5-TRIYN-1-AMINIUM ? 'C10 H12 N 1' 146.209 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YEO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.65 _exptl_crystal.density_percent_sol 53.6 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.01 M HEXADECYLTRIMETHYLAMMONIUM BROMIDE, 0.5 M SODIUM CHLORIDE, 0.01 M MAGNESIUM CHLORIDE HEXAHYDRATE PROTEIN MOLECULE WAS OF 10MG/ML DISSOLVED IN DISTILLED WATER ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2009-07-01 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9299 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.9299 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YEO _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.08 _reflns.number_obs 694937 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 48.60 _reflns.B_iso_Wilson_estimate 10.58 _reflns.pdbx_redundancy 17.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.08 _reflns_shell.d_res_low 1.10 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.77 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.70 _reflns_shell.pdbx_redundancy 17.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YEO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 75550 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.003 _refine.ls_d_res_high 1.08 _refine.ls_percent_reflns_obs 99.96 _refine.ls_R_factor_obs 0.1205 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1204 _refine.ls_R_factor_R_free 0.1234 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 3734 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 12.07 _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.412 _refine.solvent_model_param_bsol 62.925 _refine.pdbx_solvent_vdw_probe_radii 0.60 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.41 _refine.pdbx_ls_cross_valid_method ? _refine.details ;FOLLOWING THE COLLECTION OF THE DATASET, THE SYMMETRY RELATED REFLECTIONS WERE AVERAGED TO GET INDEPENDENT SET OF REFLECTIONS.40503 IS THE NUMBER UNIQUE REFLECTIONS(FRIEDEL PAIRS AVERAGED).75550 IS THE NUMBER OF INDEPENDENT REFLECTIONS WITH SEPARATED FRIEDEL PAIRS THAT WERE USED FOR ANOMALOUS DIFFERENCE FOURIR METHOD TO CHECK BEHAVIOUR OF SULFUR ATOMS IN DISULFIDE BRIDGES. ; _refine.pdbx_starting_model 'PDB ENTRY 2ASC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 8.66 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 517 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 109 _refine_hist.number_atoms_total 667 _refine_hist.d_res_high 1.08 _refine_hist.d_res_low 29.003 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.012 ? ? 618 'X-RAY DIFFRACTION' ? f_angle_d 1.694 ? ? 821 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.148 ? ? 245 'X-RAY DIFFRACTION' ? f_chiral_restr 0.097 ? ? 75 'X-RAY DIFFRACTION' ? f_plane_restr 0.009 ? ? 103 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.0805 1.0942 2632 0.2004 100.00 0.1715 . . 138 . . 'X-RAY DIFFRACTION' . 1.0942 1.1086 2689 0.1852 100.00 0.1981 . . 138 . . 'X-RAY DIFFRACTION' . 1.1086 1.1237 2654 0.1604 100.00 0.1602 . . 136 . . 'X-RAY DIFFRACTION' . 1.1237 1.1398 2637 0.1471 100.00 0.1670 . . 137 . . 'X-RAY DIFFRACTION' . 1.1398 1.1568 2664 0.1406 100.00 0.1363 . . 141 . . 'X-RAY DIFFRACTION' . 1.1568 1.1749 2660 0.1343 100.00 0.1353 . . 139 . . 'X-RAY DIFFRACTION' . 1.1749 1.1941 2662 0.1257 100.00 0.1542 . . 142 . . 'X-RAY DIFFRACTION' . 1.1941 1.2147 2654 0.1229 100.00 0.1274 . . 140 . . 'X-RAY DIFFRACTION' . 1.2147 1.2368 2660 0.1282 100.00 0.1230 . . 141 . . 'X-RAY DIFFRACTION' . 1.2368 1.2606 2670 0.1204 100.00 0.1415 . . 134 . . 'X-RAY DIFFRACTION' . 1.2606 1.2863 2632 0.1092 100.00 0.1118 . . 141 . . 'X-RAY DIFFRACTION' . 1.2863 1.3143 2681 0.1095 100.00 0.1152 . . 136 . . 'X-RAY DIFFRACTION' . 1.3143 1.3449 2631 0.1043 100.00 0.1104 . . 141 . . 'X-RAY DIFFRACTION' . 1.3449 1.3785 2672 0.0989 100.00 0.0882 . . 140 . . 'X-RAY DIFFRACTION' . 1.3785 1.4158 2668 0.0868 100.00 0.1134 . . 142 . . 'X-RAY DIFFRACTION' . 1.4158 1.4575 2674 0.0892 100.00 0.1103 . . 139 . . 'X-RAY DIFFRACTION' . 1.4575 1.5045 2649 0.0852 100.00 0.0974 . . 139 . . 'X-RAY DIFFRACTION' . 1.5045 1.5583 2664 0.0813 100.00 0.0906 . . 140 . . 'X-RAY DIFFRACTION' . 1.5583 1.6207 2656 0.0794 100.00 0.0942 . . 136 . . 'X-RAY DIFFRACTION' . 1.6207 1.6944 2665 0.0828 100.00 0.0919 . . 134 . . 'X-RAY DIFFRACTION' . 1.6944 1.7837 2679 0.0917 100.00 0.1040 . . 140 . . 'X-RAY DIFFRACTION' . 1.7837 1.8955 2648 0.0983 100.00 0.1070 . . 133 . . 'X-RAY DIFFRACTION' . 1.8955 2.0418 2671 0.1046 100.00 0.1241 . . 140 . . 'X-RAY DIFFRACTION' . 2.0418 2.2472 2653 0.1025 100.00 0.0993 . . 141 . . 'X-RAY DIFFRACTION' . 2.2472 2.5722 2656 0.1137 100.00 0.1293 . . 132 . . 'X-RAY DIFFRACTION' . 2.5722 3.2400 2682 0.1301 100.00 0.1221 . . 138 . . 'X-RAY DIFFRACTION' . 3.2400 29.0138 2653 0.1700 99.00 0.1529 . . 136 . . # _struct.entry_id 2YEO _struct.title 'A39L mutation of scorpion toxin lqh-alpha-it' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YEO _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'TOXIN, DEFENSE RESPONSE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 4 ? I N N 5 ? J N N 4 ? K N N 6 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ARG _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 19 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 30 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ARG _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 19 _struct_conf.end_auth_comp_id ASN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 30 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 64 SG ? ? A CYS 13 A CYS 64 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 37 SG ? ? A CYS 17 A CYS 37 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf3 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 47 SG ? ? A CYS 23 A CYS 47 1_555 ? ? ? ? ? ? ? 2.154 ? ? disulf4 disulf ? ? A CYS 27 SG ? ? ? 1_555 A CYS 49 SG ? ? A CYS 27 A CYS 49 1_555 ? ? ? ? ? ? ? 2.058 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 10 A . ? ASN 10 A TYR 11 A ? TYR 11 A 1 -11.02 2 ASN 10 A . ? ASN 10 A TYR 11 A ? TYR 11 A 1 -12.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? AB ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AB 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 2 ? TYR A 6 ? VAL A 2 TYR A 6 AA 2 GLY A 44 ? PRO A 53 ? GLY A 44 PRO A 53 AA 3 SER A 34 ? GLY A 41 ? SER A 34 GLY A 41 AB 1 ALA A 8 ? LYS A 9 ? ALA A 8 LYS A 9 AB 2 CYS A 13 ? VAL A 14 ? CYS A 13 VAL A 14 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ALA A 5 ? N ALA A 5 O CYS A 49 ? O CYS A 49 AA 2 3 N TYR A 50 ? N TYR A 50 O SER A 34 ? O SER A 34 AB 1 2 N LYS A 9 ? N LYS A 9 O CYS A 13 ? O CYS A 13 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DR8 1066 ? 6 'BINDING SITE FOR RESIDUE DR8 A 1066' AC2 Software A DR0 1067 ? 7 'BINDING SITE FOR RESIDUE DR0 A 1067' AC3 Software A EDO 1068 ? 8 'BINDING SITE FOR RESIDUE EDO A 1068' AC4 Software A EDO 1069 ? 7 'BINDING SITE FOR RESIDUE EDO A 1069' AC5 Software A CL 1070 ? 3 'BINDING SITE FOR RESIDUE CL A 1070' AC6 Software A CL 1071 ? 3 'BINDING SITE FOR RESIDUE CL A 1071' AC7 Software A EDO 1072 ? 8 'BINDING SITE FOR RESIDUE EDO A 1072' AC8 Software A CL 1073 ? 2 'BINDING SITE FOR RESIDUE CL A 1073' AC9 Software A EDO 1074 ? 7 'BINDING SITE FOR RESIDUE EDO A 1074' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 TYR A 36 ? TYR A 36 . ? 30_555 ? 2 AC1 6 TYR A 36 ? TYR A 36 . ? 1_555 ? 3 AC1 6 TYR A 36 ? TYR A 36 . ? 84_555 ? 4 AC1 6 TYR A 50 ? TYR A 50 . ? 84_555 ? 5 AC1 6 TYR A 50 ? TYR A 50 . ? 1_555 ? 6 AC1 6 TYR A 50 ? TYR A 50 . ? 30_555 ? 7 AC2 7 ASP A 20 ? ASP A 20 . ? 84_555 ? 8 AC2 7 TYR A 36 ? TYR A 36 . ? 84_555 ? 9 AC2 7 CYS A 37 ? CYS A 37 . ? 84_555 ? 10 AC2 7 TRP A 39 ? TRP A 39 . ? 84_555 ? 11 AC2 7 CL G . ? CL A 1071 . ? 84_555 ? 12 AC2 7 EDO J . ? EDO A 1074 . ? 84_555 ? 13 AC2 7 HOH K . ? HOH A 2071 . ? 1_555 ? 14 AC3 8 ASP A 20 ? ASP A 20 . ? 84_555 ? 15 AC3 8 ASN A 24 ? ASN A 24 . ? 84_555 ? 16 AC3 8 GLY A 35 ? GLY A 35 . ? 84_555 ? 17 AC3 8 TYR A 36 ? TYR A 36 . ? 1_555 ? 18 AC3 8 TYR A 36 ? TYR A 36 . ? 84_555 ? 19 AC3 8 TRP A 48 ? TRP A 48 . ? 1_555 ? 20 AC3 8 EDO E . ? EDO A 1069 . ? 1_555 ? 21 AC3 8 HOH K . ? HOH A 2084 . ? 1_555 ? 22 AC4 7 TYR A 6 ? TYR A 6 . ? 1_555 ? 23 AC4 7 ASP A 20 ? ASP A 20 . ? 84_555 ? 24 AC4 7 ALA A 21 ? ALA A 21 . ? 84_555 ? 25 AC4 7 ASN A 24 ? ASN A 24 . ? 84_555 ? 26 AC4 7 EDO D . ? EDO A 1068 . ? 1_555 ? 27 AC4 7 HOH K . ? HOH A 2057 . ? 84_555 ? 28 AC4 7 HOH K . ? HOH A 2104 . ? 1_555 ? 29 AC5 3 VAL A 14 ? VAL A 14 . ? 1_555 ? 30 AC5 3 ARG A 59 ? ARG A 59 . ? 1_555 ? 31 AC5 3 CYS A 64 ? CYS A 64 . ? 1_555 ? 32 AC6 3 TRP A 39 ? TRP A 39 . ? 1_555 ? 33 AC6 3 DR0 C . ? DR0 A 1067 . ? 30_555 ? 34 AC6 3 HOH K . ? HOH A 2071 . ? 1_555 ? 35 AC7 8 ILE A 7 ? ILE A 7 . ? 1_555 ? 36 AC7 8 ALA A 8 ? ALA A 8 . ? 1_555 ? 37 AC7 8 LYS A 9 ? LYS A 9 . ? 1_555 ? 38 AC7 8 TYR A 15 ? TYR A 15 . ? 1_555 ? 39 AC7 8 ASN A 30 ? ASN A 30 . ? 1_555 ? 40 AC7 8 VAL A 56 ? VAL A 56 . ? 1_555 ? 41 AC7 8 HOH K . ? HOH A 2105 . ? 1_555 ? 42 AC7 8 HOH K . ? HOH A 2106 . ? 1_555 ? 43 AC8 2 ARG A 19 ? ARG A 19 . ? 1_555 ? 44 AC8 2 HOH K . ? HOH A 2051 . ? 1_555 ? 45 AC9 7 PHE A 18 ? PHE A 18 . ? 1_555 ? 46 AC9 7 ARG A 19 ? ARG A 19 . ? 1_555 ? 47 AC9 7 TRP A 39 ? TRP A 39 . ? 1_555 ? 48 AC9 7 LEU A 40 ? LEU A 40 . ? 30_555 ? 49 AC9 7 DR0 C . ? DR0 A 1067 . ? 30_555 ? 50 AC9 7 HOH K . ? HOH A 2107 . ? 1_555 ? 51 AC9 7 HOH K . ? HOH A 2108 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YEO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YEO _atom_sites.fract_transf_matrix[1][1] 0.007710 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007710 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007710 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 CYS 23 23 23 CYS CYS A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 TRP 39 39 39 TRP TRP A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 TRP 48 48 48 TRP TRP A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ARG 65 65 65 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DR8 1 1066 1066 DR8 DR8 A . C 3 DR0 1 1067 1067 DR0 DR0 A . D 4 EDO 1 1068 1068 EDO EDO A . E 4 EDO 1 1069 1069 EDO EDO A . F 5 CL 1 1070 1070 CL CL A . G 5 CL 1 1071 1071 CL CL A . H 4 EDO 1 1072 1072 EDO EDO A . I 5 CL 1 1073 1073 CL CL A . J 4 EDO 1 1074 1074 EDO EDO A . K 6 HOH 1 2001 2001 HOH HOH A . K 6 HOH 2 2002 2002 HOH HOH A . K 6 HOH 3 2003 2003 HOH HOH A . K 6 HOH 4 2004 2004 HOH HOH A . K 6 HOH 5 2005 2005 HOH HOH A . K 6 HOH 6 2006 2006 HOH HOH A . K 6 HOH 7 2007 2007 HOH HOH A . K 6 HOH 8 2008 2008 HOH HOH A . K 6 HOH 9 2009 2009 HOH HOH A . K 6 HOH 10 2010 2010 HOH HOH A . K 6 HOH 11 2011 2011 HOH HOH A . K 6 HOH 12 2012 2012 HOH HOH A . K 6 HOH 13 2013 2013 HOH HOH A . K 6 HOH 14 2014 2014 HOH HOH A . K 6 HOH 15 2015 2015 HOH HOH A . K 6 HOH 16 2016 2016 HOH HOH A . K 6 HOH 17 2017 2017 HOH HOH A . K 6 HOH 18 2018 2018 HOH HOH A . K 6 HOH 19 2019 2019 HOH HOH A . K 6 HOH 20 2020 2020 HOH HOH A . K 6 HOH 21 2021 2021 HOH HOH A . K 6 HOH 22 2022 2022 HOH HOH A . K 6 HOH 23 2023 2023 HOH HOH A . K 6 HOH 24 2024 2024 HOH HOH A . K 6 HOH 25 2025 2025 HOH HOH A . K 6 HOH 26 2026 2026 HOH HOH A . K 6 HOH 27 2027 2027 HOH HOH A . K 6 HOH 28 2028 2028 HOH HOH A . K 6 HOH 29 2029 2029 HOH HOH A . K 6 HOH 30 2030 2030 HOH HOH A . K 6 HOH 31 2031 2031 HOH HOH A . K 6 HOH 32 2032 2032 HOH HOH A . K 6 HOH 33 2033 2033 HOH HOH A . K 6 HOH 34 2034 2034 HOH HOH A . K 6 HOH 35 2035 2035 HOH HOH A . K 6 HOH 36 2036 2036 HOH HOH A . K 6 HOH 37 2037 2037 HOH HOH A . K 6 HOH 38 2038 2038 HOH HOH A . K 6 HOH 39 2039 2039 HOH HOH A . K 6 HOH 40 2040 2040 HOH HOH A . K 6 HOH 41 2041 2041 HOH HOH A . K 6 HOH 42 2042 2042 HOH HOH A . K 6 HOH 43 2043 2043 HOH HOH A . K 6 HOH 44 2044 2044 HOH HOH A . K 6 HOH 45 2045 2045 HOH HOH A . K 6 HOH 46 2046 2046 HOH HOH A . K 6 HOH 47 2047 2047 HOH HOH A . K 6 HOH 48 2048 2048 HOH HOH A . K 6 HOH 49 2049 2049 HOH HOH A . K 6 HOH 50 2050 2050 HOH HOH A . K 6 HOH 51 2051 2051 HOH HOH A . K 6 HOH 52 2052 2052 HOH HOH A . K 6 HOH 53 2053 2053 HOH HOH A . K 6 HOH 54 2054 2054 HOH HOH A . K 6 HOH 55 2055 2055 HOH HOH A . K 6 HOH 56 2056 2056 HOH HOH A . K 6 HOH 57 2057 2057 HOH HOH A . K 6 HOH 58 2058 2058 HOH HOH A . K 6 HOH 59 2059 2059 HOH HOH A . K 6 HOH 60 2060 2060 HOH HOH A . K 6 HOH 61 2061 2061 HOH HOH A . K 6 HOH 62 2062 2062 HOH HOH A . K 6 HOH 63 2063 2063 HOH HOH A . K 6 HOH 64 2064 2064 HOH HOH A . K 6 HOH 65 2065 2065 HOH HOH A . K 6 HOH 66 2066 2066 HOH HOH A . K 6 HOH 67 2067 2067 HOH HOH A . K 6 HOH 68 2068 2068 HOH HOH A . K 6 HOH 69 2069 2069 HOH HOH A . K 6 HOH 70 2070 2070 HOH HOH A . K 6 HOH 71 2071 2071 HOH HOH A . K 6 HOH 72 2072 2072 HOH HOH A . K 6 HOH 73 2073 2073 HOH HOH A . K 6 HOH 74 2074 2074 HOH HOH A . K 6 HOH 75 2075 2075 HOH HOH A . K 6 HOH 76 2076 2076 HOH HOH A . K 6 HOH 77 2077 2077 HOH HOH A . K 6 HOH 78 2078 2078 HOH HOH A . K 6 HOH 79 2079 2079 HOH HOH A . K 6 HOH 80 2080 2080 HOH HOH A . K 6 HOH 81 2081 2081 HOH HOH A . K 6 HOH 82 2082 2082 HOH HOH A . K 6 HOH 83 2083 2083 HOH HOH A . K 6 HOH 84 2084 2084 HOH HOH A . K 6 HOH 85 2085 2085 HOH HOH A . K 6 HOH 86 2086 2086 HOH HOH A . K 6 HOH 87 2087 2087 HOH HOH A . K 6 HOH 88 2088 2088 HOH HOH A . K 6 HOH 89 2089 2089 HOH HOH A . K 6 HOH 90 2090 2090 HOH HOH A . K 6 HOH 91 2091 2091 HOH HOH A . K 6 HOH 92 2092 2092 HOH HOH A . K 6 HOH 93 2093 2093 HOH HOH A . K 6 HOH 94 2094 2094 HOH HOH A . K 6 HOH 95 2095 2095 HOH HOH A . K 6 HOH 96 2096 2096 HOH HOH A . K 6 HOH 97 2097 2097 HOH HOH A . K 6 HOH 98 2098 2098 HOH HOH A . K 6 HOH 99 2099 2099 HOH HOH A . K 6 HOH 100 2100 2100 HOH HOH A . K 6 HOH 101 2101 2101 HOH HOH A . K 6 HOH 102 2102 2102 HOH HOH A . K 6 HOH 103 2103 2103 HOH HOH A . K 6 HOH 104 2104 2104 HOH HOH A . K 6 HOH 105 2105 2105 HOH HOH A . K 6 HOH 106 2106 2106 HOH HOH A . K 6 HOH 107 2107 2107 HOH HOH A . K 6 HOH 108 2108 2108 HOH HOH A . K 6 HOH 109 2109 2109 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5750 ? 1 MORE -140.8 ? 1 'SSA (A^2)' 10300 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 84_555 -y+1/2,-z+1/2,x 0.0000000000 -1.0000000000 0.0000000000 64.8535000000 0.0000000000 0.0000000000 -1.0000000000 64.8535000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 30_555 z,-x+1/2,-y+1/2 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 64.8535000000 0.0000000000 -1.0000000000 0.0000000000 64.8535000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A DR8 1066 ? B DR8 . 2 1 A DR8 1066 ? B DR8 . 3 1 A DR8 1066 ? B DR8 . 4 1 A DR8 1066 ? B DR8 . 5 1 A DR8 1066 ? B DR8 . 6 1 A DR8 1066 ? B DR8 . 7 1 A DR8 1066 ? B DR8 . 8 1 A DR8 1066 ? B DR8 . 9 1 A HOH 2011 ? K HOH . 10 1 A HOH 2052 ? K HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-13 2 'Structure model' 1 1 2011-05-12 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_special_symmetry 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 HKL-2000 'data reduction' . ? 2 DENZO 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SCALEPACK 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_entry_details.entry_id 2YEO _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, ALA 58 TO LEU' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2043 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2079 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2009 ? 6.01 . 2 1 O ? A HOH 2010 ? 6.06 . 3 1 O ? A HOH 2011 ? 8.41 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DR0 CAJ C N N 89 DR0 CAI C N N 90 DR0 CAH C N N 91 DR0 CAG C N N 92 DR0 CAF C N N 93 DR0 CAE C N N 94 DR0 NAD N N N 95 DR0 CAC C N N 96 DR0 CAK C N N 97 DR0 CAB C N N 98 DR0 OAA O N N 99 DR0 HAJ1 H N N 100 DR0 HAJ2 H N N 101 DR0 HAJ3 H N N 102 DR0 HAI1 H N N 103 DR0 HAI2 H N N 104 DR0 HAH1 H N N 105 DR0 HAH2 H N N 106 DR0 HAG1 H N N 107 DR0 HAG2 H N N 108 DR0 HAF1 H N N 109 DR0 HAF2 H N N 110 DR0 HAE1 H N N 111 DR0 HAE2 H N N 112 DR0 HAC1 H N N 113 DR0 HAC2 H N N 114 DR0 HAC3 H N N 115 DR0 HAK1 H N N 116 DR0 HAK2 H N N 117 DR0 HAK3 H N N 118 DR0 HAB1 H N N 119 DR0 HAB2 H N N 120 DR0 HAA H N N 121 DR8 CAJ C N N 122 DR8 CAI C N N 123 DR8 CAH C N N 124 DR8 CAG C N N 125 DR8 CAF C N N 126 DR8 CAE C N N 127 DR8 CAD C N N 128 DR8 NAC N N N 129 DR8 CAK C N N 130 DR8 CAA C N N 131 DR8 CAB C N N 132 DR8 HAJ1 H N N 133 DR8 HAJ2 H N N 134 DR8 HAJ3 H N N 135 DR8 HAK1 H N N 136 DR8 HAK2 H N N 137 DR8 HAK3 H N N 138 DR8 HAA1 H N N 139 DR8 HAA2 H N N 140 DR8 HAA3 H N N 141 DR8 HAB1 H N N 142 DR8 HAB2 H N N 143 DR8 HAB3 H N N 144 EDO C1 C N N 145 EDO O1 O N N 146 EDO C2 C N N 147 EDO O2 O N N 148 EDO H11 H N N 149 EDO H12 H N N 150 EDO HO1 H N N 151 EDO H21 H N N 152 EDO H22 H N N 153 EDO HO2 H N N 154 GLN N N N N 155 GLN CA C N S 156 GLN C C N N 157 GLN O O N N 158 GLN CB C N N 159 GLN CG C N N 160 GLN CD C N N 161 GLN OE1 O N N 162 GLN NE2 N N N 163 GLN OXT O N N 164 GLN H H N N 165 GLN H2 H N N 166 GLN HA H N N 167 GLN HB2 H N N 168 GLN HB3 H N N 169 GLN HG2 H N N 170 GLN HG3 H N N 171 GLN HE21 H N N 172 GLN HE22 H N N 173 GLN HXT H N N 174 GLU N N N N 175 GLU CA C N S 176 GLU C C N N 177 GLU O O N N 178 GLU CB C N N 179 GLU CG C N N 180 GLU CD C N N 181 GLU OE1 O N N 182 GLU OE2 O N N 183 GLU OXT O N N 184 GLU H H N N 185 GLU H2 H N N 186 GLU HA H N N 187 GLU HB2 H N N 188 GLU HB3 H N N 189 GLU HG2 H N N 190 GLU HG3 H N N 191 GLU HE2 H N N 192 GLU HXT H N N 193 GLY N N N N 194 GLY CA C N N 195 GLY C C N N 196 GLY O O N N 197 GLY OXT O N N 198 GLY H H N N 199 GLY H2 H N N 200 GLY HA2 H N N 201 GLY HA3 H N N 202 GLY HXT H N N 203 HIS N N N N 204 HIS CA C N S 205 HIS C C N N 206 HIS O O N N 207 HIS CB C N N 208 HIS CG C Y N 209 HIS ND1 N Y N 210 HIS CD2 C Y N 211 HIS CE1 C Y N 212 HIS NE2 N Y N 213 HIS OXT O N N 214 HIS H H N N 215 HIS H2 H N N 216 HIS HA H N N 217 HIS HB2 H N N 218 HIS HB3 H N N 219 HIS HD1 H N N 220 HIS HD2 H N N 221 HIS HE1 H N N 222 HIS HE2 H N N 223 HIS HXT H N N 224 HOH O O N N 225 HOH H1 H N N 226 HOH H2 H N N 227 ILE N N N N 228 ILE CA C N S 229 ILE C C N N 230 ILE O O N N 231 ILE CB C N S 232 ILE CG1 C N N 233 ILE CG2 C N N 234 ILE CD1 C N N 235 ILE OXT O N N 236 ILE H H N N 237 ILE H2 H N N 238 ILE HA H N N 239 ILE HB H N N 240 ILE HG12 H N N 241 ILE HG13 H N N 242 ILE HG21 H N N 243 ILE HG22 H N N 244 ILE HG23 H N N 245 ILE HD11 H N N 246 ILE HD12 H N N 247 ILE HD13 H N N 248 ILE HXT H N N 249 LEU N N N N 250 LEU CA C N S 251 LEU C C N N 252 LEU O O N N 253 LEU CB C N N 254 LEU CG C N N 255 LEU CD1 C N N 256 LEU CD2 C N N 257 LEU OXT O N N 258 LEU H H N N 259 LEU H2 H N N 260 LEU HA H N N 261 LEU HB2 H N N 262 LEU HB3 H N N 263 LEU HG H N N 264 LEU HD11 H N N 265 LEU HD12 H N N 266 LEU HD13 H N N 267 LEU HD21 H N N 268 LEU HD22 H N N 269 LEU HD23 H N N 270 LEU HXT H N N 271 LYS N N N N 272 LYS CA C N S 273 LYS C C N N 274 LYS O O N N 275 LYS CB C N N 276 LYS CG C N N 277 LYS CD C N N 278 LYS CE C N N 279 LYS NZ N N N 280 LYS OXT O N N 281 LYS H H N N 282 LYS H2 H N N 283 LYS HA H N N 284 LYS HB2 H N N 285 LYS HB3 H N N 286 LYS HG2 H N N 287 LYS HG3 H N N 288 LYS HD2 H N N 289 LYS HD3 H N N 290 LYS HE2 H N N 291 LYS HE3 H N N 292 LYS HZ1 H N N 293 LYS HZ2 H N N 294 LYS HZ3 H N N 295 LYS HXT H N N 296 MET N N N N 297 MET CA C N S 298 MET C C N N 299 MET O O N N 300 MET CB C N N 301 MET CG C N N 302 MET SD S N N 303 MET CE C N N 304 MET OXT O N N 305 MET H H N N 306 MET H2 H N N 307 MET HA H N N 308 MET HB2 H N N 309 MET HB3 H N N 310 MET HG2 H N N 311 MET HG3 H N N 312 MET HE1 H N N 313 MET HE2 H N N 314 MET HE3 H N N 315 MET HXT H N N 316 PHE N N N N 317 PHE CA C N S 318 PHE C C N N 319 PHE O O N N 320 PHE CB C N N 321 PHE CG C Y N 322 PHE CD1 C Y N 323 PHE CD2 C Y N 324 PHE CE1 C Y N 325 PHE CE2 C Y N 326 PHE CZ C Y N 327 PHE OXT O N N 328 PHE H H N N 329 PHE H2 H N N 330 PHE HA H N N 331 PHE HB2 H N N 332 PHE HB3 H N N 333 PHE HD1 H N N 334 PHE HD2 H N N 335 PHE HE1 H N N 336 PHE HE2 H N N 337 PHE HZ H N N 338 PHE HXT H N N 339 PRO N N N N 340 PRO CA C N S 341 PRO C C N N 342 PRO O O N N 343 PRO CB C N N 344 PRO CG C N N 345 PRO CD C N N 346 PRO OXT O N N 347 PRO H H N N 348 PRO HA H N N 349 PRO HB2 H N N 350 PRO HB3 H N N 351 PRO HG2 H N N 352 PRO HG3 H N N 353 PRO HD2 H N N 354 PRO HD3 H N N 355 PRO HXT H N N 356 SER N N N N 357 SER CA C N S 358 SER C C N N 359 SER O O N N 360 SER CB C N N 361 SER OG O N N 362 SER OXT O N N 363 SER H H N N 364 SER H2 H N N 365 SER HA H N N 366 SER HB2 H N N 367 SER HB3 H N N 368 SER HG H N N 369 SER HXT H N N 370 THR N N N N 371 THR CA C N S 372 THR C C N N 373 THR O O N N 374 THR CB C N R 375 THR OG1 O N N 376 THR CG2 C N N 377 THR OXT O N N 378 THR H H N N 379 THR H2 H N N 380 THR HA H N N 381 THR HB H N N 382 THR HG1 H N N 383 THR HG21 H N N 384 THR HG22 H N N 385 THR HG23 H N N 386 THR HXT H N N 387 TRP N N N N 388 TRP CA C N S 389 TRP C C N N 390 TRP O O N N 391 TRP CB C N N 392 TRP CG C Y N 393 TRP CD1 C Y N 394 TRP CD2 C Y N 395 TRP NE1 N Y N 396 TRP CE2 C Y N 397 TRP CE3 C Y N 398 TRP CZ2 C Y N 399 TRP CZ3 C Y N 400 TRP CH2 C Y N 401 TRP OXT O N N 402 TRP H H N N 403 TRP H2 H N N 404 TRP HA H N N 405 TRP HB2 H N N 406 TRP HB3 H N N 407 TRP HD1 H N N 408 TRP HE1 H N N 409 TRP HE3 H N N 410 TRP HZ2 H N N 411 TRP HZ3 H N N 412 TRP HH2 H N N 413 TRP HXT H N N 414 TYR N N N N 415 TYR CA C N S 416 TYR C C N N 417 TYR O O N N 418 TYR CB C N N 419 TYR CG C Y N 420 TYR CD1 C Y N 421 TYR CD2 C Y N 422 TYR CE1 C Y N 423 TYR CE2 C Y N 424 TYR CZ C Y N 425 TYR OH O N N 426 TYR OXT O N N 427 TYR H H N N 428 TYR H2 H N N 429 TYR HA H N N 430 TYR HB2 H N N 431 TYR HB3 H N N 432 TYR HD1 H N N 433 TYR HD2 H N N 434 TYR HE1 H N N 435 TYR HE2 H N N 436 TYR HH H N N 437 TYR HXT H N N 438 VAL N N N N 439 VAL CA C N S 440 VAL C C N N 441 VAL O O N N 442 VAL CB C N N 443 VAL CG1 C N N 444 VAL CG2 C N N 445 VAL OXT O N N 446 VAL H H N N 447 VAL H2 H N N 448 VAL HA H N N 449 VAL HB H N N 450 VAL HG11 H N N 451 VAL HG12 H N N 452 VAL HG13 H N N 453 VAL HG21 H N N 454 VAL HG22 H N N 455 VAL HG23 H N N 456 VAL HXT H N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DR0 CAJ CAI sing N N 83 DR0 CAJ HAJ1 sing N N 84 DR0 CAJ HAJ2 sing N N 85 DR0 CAJ HAJ3 sing N N 86 DR0 CAI CAH sing N N 87 DR0 CAI HAI1 sing N N 88 DR0 CAI HAI2 sing N N 89 DR0 CAH CAG sing N N 90 DR0 CAH HAH1 sing N N 91 DR0 CAH HAH2 sing N N 92 DR0 CAG CAF sing N N 93 DR0 CAG HAG1 sing N N 94 DR0 CAG HAG2 sing N N 95 DR0 CAF CAE sing N N 96 DR0 CAF HAF1 sing N N 97 DR0 CAF HAF2 sing N N 98 DR0 CAE NAD sing N N 99 DR0 CAE HAE1 sing N N 100 DR0 CAE HAE2 sing N N 101 DR0 NAD CAC sing N N 102 DR0 NAD CAK sing N N 103 DR0 NAD CAB sing N N 104 DR0 CAC HAC1 sing N N 105 DR0 CAC HAC2 sing N N 106 DR0 CAC HAC3 sing N N 107 DR0 CAK HAK1 sing N N 108 DR0 CAK HAK2 sing N N 109 DR0 CAK HAK3 sing N N 110 DR0 CAB OAA sing N N 111 DR0 CAB HAB1 sing N N 112 DR0 CAB HAB2 sing N N 113 DR0 OAA HAA sing N N 114 DR8 CAJ CAI sing N N 115 DR8 CAJ HAJ1 sing N N 116 DR8 CAJ HAJ2 sing N N 117 DR8 CAJ HAJ3 sing N N 118 DR8 CAI CAH trip N N 119 DR8 CAH CAG sing N N 120 DR8 CAG CAF trip N N 121 DR8 CAF CAE sing N N 122 DR8 CAE CAD trip N N 123 DR8 CAD NAC sing N N 124 DR8 NAC CAK sing N N 125 DR8 NAC CAA sing N N 126 DR8 NAC CAB sing N N 127 DR8 CAK HAK1 sing N N 128 DR8 CAK HAK2 sing N N 129 DR8 CAK HAK3 sing N N 130 DR8 CAA HAA1 sing N N 131 DR8 CAA HAA2 sing N N 132 DR8 CAA HAA3 sing N N 133 DR8 CAB HAB1 sing N N 134 DR8 CAB HAB2 sing N N 135 DR8 CAB HAB3 sing N N 136 EDO C1 O1 sing N N 137 EDO C1 C2 sing N N 138 EDO C1 H11 sing N N 139 EDO C1 H12 sing N N 140 EDO O1 HO1 sing N N 141 EDO C2 O2 sing N N 142 EDO C2 H21 sing N N 143 EDO C2 H22 sing N N 144 EDO O2 HO2 sing N N 145 GLN N CA sing N N 146 GLN N H sing N N 147 GLN N H2 sing N N 148 GLN CA C sing N N 149 GLN CA CB sing N N 150 GLN CA HA sing N N 151 GLN C O doub N N 152 GLN C OXT sing N N 153 GLN CB CG sing N N 154 GLN CB HB2 sing N N 155 GLN CB HB3 sing N N 156 GLN CG CD sing N N 157 GLN CG HG2 sing N N 158 GLN CG HG3 sing N N 159 GLN CD OE1 doub N N 160 GLN CD NE2 sing N N 161 GLN NE2 HE21 sing N N 162 GLN NE2 HE22 sing N N 163 GLN OXT HXT sing N N 164 GLU N CA sing N N 165 GLU N H sing N N 166 GLU N H2 sing N N 167 GLU CA C sing N N 168 GLU CA CB sing N N 169 GLU CA HA sing N N 170 GLU C O doub N N 171 GLU C OXT sing N N 172 GLU CB CG sing N N 173 GLU CB HB2 sing N N 174 GLU CB HB3 sing N N 175 GLU CG CD sing N N 176 GLU CG HG2 sing N N 177 GLU CG HG3 sing N N 178 GLU CD OE1 doub N N 179 GLU CD OE2 sing N N 180 GLU OE2 HE2 sing N N 181 GLU OXT HXT sing N N 182 GLY N CA sing N N 183 GLY N H sing N N 184 GLY N H2 sing N N 185 GLY CA C sing N N 186 GLY CA HA2 sing N N 187 GLY CA HA3 sing N N 188 GLY C O doub N N 189 GLY C OXT sing N N 190 GLY OXT HXT sing N N 191 HIS N CA sing N N 192 HIS N H sing N N 193 HIS N H2 sing N N 194 HIS CA C sing N N 195 HIS CA CB sing N N 196 HIS CA HA sing N N 197 HIS C O doub N N 198 HIS C OXT sing N N 199 HIS CB CG sing N N 200 HIS CB HB2 sing N N 201 HIS CB HB3 sing N N 202 HIS CG ND1 sing Y N 203 HIS CG CD2 doub Y N 204 HIS ND1 CE1 doub Y N 205 HIS ND1 HD1 sing N N 206 HIS CD2 NE2 sing Y N 207 HIS CD2 HD2 sing N N 208 HIS CE1 NE2 sing Y N 209 HIS CE1 HE1 sing N N 210 HIS NE2 HE2 sing N N 211 HIS OXT HXT sing N N 212 HOH O H1 sing N N 213 HOH O H2 sing N N 214 ILE N CA sing N N 215 ILE N H sing N N 216 ILE N H2 sing N N 217 ILE CA C sing N N 218 ILE CA CB sing N N 219 ILE CA HA sing N N 220 ILE C O doub N N 221 ILE C OXT sing N N 222 ILE CB CG1 sing N N 223 ILE CB CG2 sing N N 224 ILE CB HB sing N N 225 ILE CG1 CD1 sing N N 226 ILE CG1 HG12 sing N N 227 ILE CG1 HG13 sing N N 228 ILE CG2 HG21 sing N N 229 ILE CG2 HG22 sing N N 230 ILE CG2 HG23 sing N N 231 ILE CD1 HD11 sing N N 232 ILE CD1 HD12 sing N N 233 ILE CD1 HD13 sing N N 234 ILE OXT HXT sing N N 235 LEU N CA sing N N 236 LEU N H sing N N 237 LEU N H2 sing N N 238 LEU CA C sing N N 239 LEU CA CB sing N N 240 LEU CA HA sing N N 241 LEU C O doub N N 242 LEU C OXT sing N N 243 LEU CB CG sing N N 244 LEU CB HB2 sing N N 245 LEU CB HB3 sing N N 246 LEU CG CD1 sing N N 247 LEU CG CD2 sing N N 248 LEU CG HG sing N N 249 LEU CD1 HD11 sing N N 250 LEU CD1 HD12 sing N N 251 LEU CD1 HD13 sing N N 252 LEU CD2 HD21 sing N N 253 LEU CD2 HD22 sing N N 254 LEU CD2 HD23 sing N N 255 LEU OXT HXT sing N N 256 LYS N CA sing N N 257 LYS N H sing N N 258 LYS N H2 sing N N 259 LYS CA C sing N N 260 LYS CA CB sing N N 261 LYS CA HA sing N N 262 LYS C O doub N N 263 LYS C OXT sing N N 264 LYS CB CG sing N N 265 LYS CB HB2 sing N N 266 LYS CB HB3 sing N N 267 LYS CG CD sing N N 268 LYS CG HG2 sing N N 269 LYS CG HG3 sing N N 270 LYS CD CE sing N N 271 LYS CD HD2 sing N N 272 LYS CD HD3 sing N N 273 LYS CE NZ sing N N 274 LYS CE HE2 sing N N 275 LYS CE HE3 sing N N 276 LYS NZ HZ1 sing N N 277 LYS NZ HZ2 sing N N 278 LYS NZ HZ3 sing N N 279 LYS OXT HXT sing N N 280 MET N CA sing N N 281 MET N H sing N N 282 MET N H2 sing N N 283 MET CA C sing N N 284 MET CA CB sing N N 285 MET CA HA sing N N 286 MET C O doub N N 287 MET C OXT sing N N 288 MET CB CG sing N N 289 MET CB HB2 sing N N 290 MET CB HB3 sing N N 291 MET CG SD sing N N 292 MET CG HG2 sing N N 293 MET CG HG3 sing N N 294 MET SD CE sing N N 295 MET CE HE1 sing N N 296 MET CE HE2 sing N N 297 MET CE HE3 sing N N 298 MET OXT HXT sing N N 299 PHE N CA sing N N 300 PHE N H sing N N 301 PHE N H2 sing N N 302 PHE CA C sing N N 303 PHE CA CB sing N N 304 PHE CA HA sing N N 305 PHE C O doub N N 306 PHE C OXT sing N N 307 PHE CB CG sing N N 308 PHE CB HB2 sing N N 309 PHE CB HB3 sing N N 310 PHE CG CD1 doub Y N 311 PHE CG CD2 sing Y N 312 PHE CD1 CE1 sing Y N 313 PHE CD1 HD1 sing N N 314 PHE CD2 CE2 doub Y N 315 PHE CD2 HD2 sing N N 316 PHE CE1 CZ doub Y N 317 PHE CE1 HE1 sing N N 318 PHE CE2 CZ sing Y N 319 PHE CE2 HE2 sing N N 320 PHE CZ HZ sing N N 321 PHE OXT HXT sing N N 322 PRO N CA sing N N 323 PRO N CD sing N N 324 PRO N H sing N N 325 PRO CA C sing N N 326 PRO CA CB sing N N 327 PRO CA HA sing N N 328 PRO C O doub N N 329 PRO C OXT sing N N 330 PRO CB CG sing N N 331 PRO CB HB2 sing N N 332 PRO CB HB3 sing N N 333 PRO CG CD sing N N 334 PRO CG HG2 sing N N 335 PRO CG HG3 sing N N 336 PRO CD HD2 sing N N 337 PRO CD HD3 sing N N 338 PRO OXT HXT sing N N 339 SER N CA sing N N 340 SER N H sing N N 341 SER N H2 sing N N 342 SER CA C sing N N 343 SER CA CB sing N N 344 SER CA HA sing N N 345 SER C O doub N N 346 SER C OXT sing N N 347 SER CB OG sing N N 348 SER CB HB2 sing N N 349 SER CB HB3 sing N N 350 SER OG HG sing N N 351 SER OXT HXT sing N N 352 THR N CA sing N N 353 THR N H sing N N 354 THR N H2 sing N N 355 THR CA C sing N N 356 THR CA CB sing N N 357 THR CA HA sing N N 358 THR C O doub N N 359 THR C OXT sing N N 360 THR CB OG1 sing N N 361 THR CB CG2 sing N N 362 THR CB HB sing N N 363 THR OG1 HG1 sing N N 364 THR CG2 HG21 sing N N 365 THR CG2 HG22 sing N N 366 THR CG2 HG23 sing N N 367 THR OXT HXT sing N N 368 TRP N CA sing N N 369 TRP N H sing N N 370 TRP N H2 sing N N 371 TRP CA C sing N N 372 TRP CA CB sing N N 373 TRP CA HA sing N N 374 TRP C O doub N N 375 TRP C OXT sing N N 376 TRP CB CG sing N N 377 TRP CB HB2 sing N N 378 TRP CB HB3 sing N N 379 TRP CG CD1 doub Y N 380 TRP CG CD2 sing Y N 381 TRP CD1 NE1 sing Y N 382 TRP CD1 HD1 sing N N 383 TRP CD2 CE2 doub Y N 384 TRP CD2 CE3 sing Y N 385 TRP NE1 CE2 sing Y N 386 TRP NE1 HE1 sing N N 387 TRP CE2 CZ2 sing Y N 388 TRP CE3 CZ3 doub Y N 389 TRP CE3 HE3 sing N N 390 TRP CZ2 CH2 doub Y N 391 TRP CZ2 HZ2 sing N N 392 TRP CZ3 CH2 sing Y N 393 TRP CZ3 HZ3 sing N N 394 TRP CH2 HH2 sing N N 395 TRP OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 N,N,N-TRIMETHYLHEPTA-1,3,5-TRIYN-1-AMINIUM DR8 3 'N-(HYDROXYMETHYL)-N,N-DIMETHYLHEXAN-1-AMINIUM' DR0 4 1,2-ETHANEDIOL EDO 5 'CHLORIDE ION' CL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ASC _pdbx_initial_refinement_model.details 'PDB ENTRY 2ASC' #