HEADER LIGASE 04-MAY-11 2YHO TITLE THE IDOL-UBE2D COMPLEX MEDIATES STEROL-DEPENDENT DEGRADATION OF THE TITLE 2 LDL RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE MYLIP; COMPND 3 CHAIN: A, C, E, G; COMPND 4 FRAGMENT: RING, RESIDUES 369-445; COMPND 5 SYNONYM: INDUCIBLE DEGRADER OF THE LDL-RECEPTOR, IDOL, MYOSIN COMPND 6 REGULATORY LIGHT CHAIN INTERACTING PROTEIN, MIR; COMPND 7 EC: 6.3.2.-; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: UBIQUITIN-CONJUGATING ENZYME E2 D1; COMPND 11 CHAIN: B, D, F, H; COMPND 12 SYNONYM: STIMULATOR OF FE TRANSPORT, SFT, UBC4/5 HOMOLOG, UBCH5, COMPND 13 UBIQUITIN CARRIER PROTEIN D1, UBIQUITIN-CONJUGATING ENZYME E2(17)KB COMPND 14 1, UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 1, UBIQUITIN-PROTEIN LIGASE COMPND 15 D1, UBE2D1; COMPND 16 EC: 6.3.2.19; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS LIGASE, E2 LIGASE-E3 LIGASE COMPLEX, RING ZINC-FINGER, UBL KEYWDS 2 CONJUGATION PATHWAY EXPDTA X-RAY DIFFRACTION AUTHOR L.FAIRALL,B.T.GOULT,C.J.MILLARD,P.TONTONOZ,J.W.R.SCHWABE REVDAT 2 20-DEC-23 2YHO 1 REMARK LINK REVDAT 1 29-JUN-11 2YHO 0 JRNL AUTH L.ZHANG,L.FAIRALL,B.T.GOULT,A.C.CALKIN,C.HONG,C.J.MILLARD, JRNL AUTH 2 P.TONTONOZ,J.W.SCHWABE JRNL TITL THE IDOL-UBE2D COMPLEX MEDIATES STEROL-DEPENDENT DEGRADATION JRNL TITL 2 OF THE LDL RECEPTOR. JRNL REF GENES DEV. V. 25 1262 2011 JRNL REFN ISSN 0890-9369 JRNL PMID 21685362 JRNL DOI 10.1101/GAD.2056211 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 53163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2696 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.9254 - 4.5236 0.99 5279 313 0.1853 0.2076 REMARK 3 2 4.5236 - 3.5907 1.00 5238 302 0.1592 0.1928 REMARK 3 3 3.5907 - 3.1369 0.98 5207 297 0.1780 0.2391 REMARK 3 4 3.1369 - 2.8501 0.98 5169 266 0.1916 0.2486 REMARK 3 5 2.8501 - 2.6458 0.96 5050 265 0.1943 0.2693 REMARK 3 6 2.6458 - 2.4898 0.96 5056 259 0.1958 0.2552 REMARK 3 7 2.4898 - 2.3651 0.94 4971 249 0.1880 0.2611 REMARK 3 8 2.3651 - 2.2622 0.93 4872 251 0.1989 0.2680 REMARK 3 9 2.2622 - 2.1751 0.92 4887 259 0.2093 0.2722 REMARK 3 10 2.1751 - 2.1000 0.90 4738 235 0.1879 0.2559 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 41.24 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 13.19190 REMARK 3 B22 (A**2) : -3.57250 REMARK 3 B33 (A**2) : -9.61930 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.04840 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6996 REMARK 3 ANGLE : 1.153 9514 REMARK 3 CHIRALITY : 0.072 1052 REMARK 3 PLANARITY : 0.005 1228 REMARK 3 DIHEDRAL : 15.082 2571 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1290048192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97630 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53163 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 55.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 3EB6, 2YHN REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE PH 5.5, 0.2 M REMARK 280 SODIUM ACETATE, 10% PEG 4000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 68.93500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 367 REMARK 465 ALA A 368 REMARK 465 GLN A 369 REMARK 465 GLN A 370 REMARK 465 THR A 371 REMARK 465 LEU A 439 REMARK 465 LEU A 440 REMARK 465 ASN A 441 REMARK 465 LEU A 442 REMARK 465 THR A 443 REMARK 465 VAL A 444 REMARK 465 ILE A 445 REMARK 465 GLY C 367 REMARK 465 ALA C 368 REMARK 465 GLN C 369 REMARK 465 GLN C 370 REMARK 465 THR C 371 REMARK 465 LEU C 439 REMARK 465 LEU C 440 REMARK 465 ASN C 441 REMARK 465 LEU C 442 REMARK 465 THR C 443 REMARK 465 VAL C 444 REMARK 465 ILE C 445 REMARK 465 GLY E 367 REMARK 465 ALA E 368 REMARK 465 GLN E 369 REMARK 465 GLN E 370 REMARK 465 THR E 371 REMARK 465 LEU E 442 REMARK 465 THR E 443 REMARK 465 VAL E 444 REMARK 465 ILE E 445 REMARK 465 GLY G 367 REMARK 465 ALA G 368 REMARK 465 GLN G 369 REMARK 465 GLN G 370 REMARK 465 THR G 371 REMARK 465 LEU G 442 REMARK 465 THR G 443 REMARK 465 VAL G 444 REMARK 465 ILE G 445 REMARK 465 GLY H -1 REMARK 465 ALA H 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 374 CG CD1 CD2 REMARK 470 GLN A 375 CG CD OE1 NE2 REMARK 470 SER A 438 OG REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 GLU B 132 CG CD OE1 OE2 REMARK 470 GLN C 375 CG CD OE1 NE2 REMARK 470 GLU C 376 CG CD OE1 OE2 REMARK 470 HIS C 436 CG ND1 CD2 CE1 NE2 REMARK 470 SER C 438 OG REMARK 470 GLU D 132 CG CD OE1 OE2 REMARK 470 ARG E 372 CG CD NE CZ NH1 NH2 REMARK 470 VAL E 373 CG1 CG2 REMARK 470 LEU E 374 CG CD1 CD2 REMARK 470 GLU E 376 CG CD OE1 OE2 REMARK 470 LYS E 377 CG CD CE NZ REMARK 470 LEU E 381 CG CD1 CD2 REMARK 470 ASP F 42 CG OD1 OD2 REMARK 470 ASP F 117 CG OD1 OD2 REMARK 470 VAL G 373 CG1 CG2 REMARK 470 GLU G 376 CG CD OE1 OE2 REMARK 470 SER G 438 OG REMARK 470 ASN G 441 CG OD1 ND2 REMARK 470 ASP H 42 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO D 41 O HOH D 2031 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 396 27.78 -159.32 REMARK 500 THR A 437 -113.21 -87.17 REMARK 500 ASP B 42 53.10 -102.13 REMARK 500 ARG B 90 -109.71 -127.26 REMARK 500 VAL C 373 -18.84 69.44 REMARK 500 GLU C 392 -70.15 -104.86 REMARK 500 ASN C 396 29.96 -149.60 REMARK 500 THR C 437 -134.10 48.62 REMARK 500 ASP D 42 -6.64 74.79 REMARK 500 ARG D 90 -125.40 -123.61 REMARK 500 VAL E 373 -0.96 70.25 REMARK 500 CYS E 391 18.05 58.49 REMARK 500 GLU E 392 -68.44 -102.67 REMARK 500 ASN E 396 23.90 -149.78 REMARK 500 ARG F 90 -114.47 -132.96 REMARK 500 ASP F 130 71.34 -151.79 REMARK 500 VAL G 373 -16.87 66.41 REMARK 500 ASN G 396 24.39 -156.54 REMARK 500 SER G 438 -89.46 -128.73 REMARK 500 LEU G 440 46.89 -85.75 REMARK 500 ASP H 42 -29.09 87.35 REMARK 500 HIS H 75 143.33 -171.29 REMARK 500 ARG H 90 -120.47 -126.41 REMARK 500 ASP H 117 69.11 -109.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D2044 DISTANCE = 6.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 387 SG REMARK 620 2 CYS A 390 SG 105.4 REMARK 620 3 CYS A 408 SG 112.2 114.9 REMARK 620 4 CYS A 411 SG 105.1 114.2 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 402 SG REMARK 620 2 HIS A 404 ND1 111.3 REMARK 620 3 CYS A 418 SG 108.3 107.5 REMARK 620 4 CYS A 421 SG 108.6 110.0 111.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 387 SG REMARK 620 2 CYS C 390 SG 102.7 REMARK 620 3 CYS C 408 SG 115.1 114.8 REMARK 620 4 CYS C 411 SG 107.1 113.2 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 402 SG REMARK 620 2 HIS C 404 ND1 108.5 REMARK 620 3 CYS C 418 SG 108.5 108.8 REMARK 620 4 CYS C 421 SG 111.9 106.6 112.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 387 SG REMARK 620 2 CYS E 390 SG 103.9 REMARK 620 3 CYS E 408 SG 115.1 115.8 REMARK 620 4 CYS E 411 SG 106.8 112.2 102.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 402 SG REMARK 620 2 HIS E 404 ND1 110.0 REMARK 620 3 CYS E 418 SG 108.0 111.3 REMARK 620 4 CYS E 421 SG 107.4 109.7 110.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS G 387 SG REMARK 620 2 CYS G 390 SG 105.8 REMARK 620 3 CYS G 408 SG 113.9 114.2 REMARK 620 4 CYS G 411 SG 101.8 115.4 105.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS G 402 SG REMARK 620 2 HIS G 404 ND1 111.8 REMARK 620 3 CYS G 418 SG 107.9 108.4 REMARK 620 4 CYS G 421 SG 108.6 110.0 110.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN E 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN E 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN G 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN G 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT H 1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT G 1442 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT H 1149 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT F 1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1149 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1439 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT H 1150 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1440 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YHN RELATED DB: PDB REMARK 900 THE IDOL-UBE2D COMPLEX MEDIATES STEROL-DEPENDENT DEGRADATION OF THE REMARK 900 LDL RECEPTOR REMARK 900 RELATED ID: 2C4P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN UBIQUITIN-CONJUGATING ENZYME UBCH5A DBREF 2YHO A 369 445 UNP Q8WY64 MYLIP_HUMAN 369 445 DBREF 2YHO B 1 147 UNP P51668 UB2D1_HUMAN 1 147 DBREF 2YHO C 369 445 UNP Q8WY64 MYLIP_HUMAN 369 445 DBREF 2YHO D 1 147 UNP P51668 UB2D1_HUMAN 1 147 DBREF 2YHO E 369 445 UNP Q8WY64 MYLIP_HUMAN 369 445 DBREF 2YHO F 1 147 UNP P51668 UB2D1_HUMAN 1 147 DBREF 2YHO G 369 445 UNP Q8WY64 MYLIP_HUMAN 369 445 DBREF 2YHO H 1 147 UNP P51668 UB2D1_HUMAN 1 147 SEQADV 2YHO GLY A 367 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO ALA A 368 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO GLY B -1 UNP P51668 EXPRESSION TAG SEQADV 2YHO ALA B 0 UNP P51668 EXPRESSION TAG SEQADV 2YHO GLY C 367 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO ALA C 368 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO GLY D -1 UNP P51668 EXPRESSION TAG SEQADV 2YHO ALA D 0 UNP P51668 EXPRESSION TAG SEQADV 2YHO GLY E 367 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO ALA E 368 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO GLY F -1 UNP P51668 EXPRESSION TAG SEQADV 2YHO ALA F 0 UNP P51668 EXPRESSION TAG SEQADV 2YHO GLY G 367 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO ALA G 368 UNP Q8WY64 EXPRESSION TAG SEQADV 2YHO GLY H -1 UNP P51668 EXPRESSION TAG SEQADV 2YHO ALA H 0 UNP P51668 EXPRESSION TAG SEQRES 1 A 79 GLY ALA GLN GLN THR ARG VAL LEU GLN GLU LYS LEU ARG SEQRES 2 A 79 LYS LEU LYS GLU ALA MET LEU CYS MET VAL CYS CYS GLU SEQRES 3 A 79 GLU GLU ILE ASN SER THR PHE CYS PRO CYS GLY HIS THR SEQRES 4 A 79 VAL CYS CYS GLU SER CYS ALA ALA GLN LEU GLN SER CYS SEQRES 5 A 79 PRO VAL CYS ARG SER ARG VAL GLU HIS VAL GLN HIS VAL SEQRES 6 A 79 TYR LEU PRO THR HIS THR SER LEU LEU ASN LEU THR VAL SEQRES 7 A 79 ILE SEQRES 1 B 149 GLY ALA MET ALA LEU LYS ARG ILE GLN LYS GLU LEU SER SEQRES 2 B 149 ASP LEU GLN ARG ASP PRO PRO ALA HIS CYS SER ALA GLY SEQRES 3 B 149 PRO VAL GLY ASP ASP LEU PHE HIS TRP GLN ALA THR ILE SEQRES 4 B 149 MET GLY PRO PRO ASP SER ALA TYR GLN GLY GLY VAL PHE SEQRES 5 B 149 PHE LEU THR VAL HIS PHE PRO THR ASP TYR PRO PHE LYS SEQRES 6 B 149 PRO PRO LYS ILE ALA PHE THR THR LYS ILE TYR HIS PRO SEQRES 7 B 149 ASN ILE ASN SER ASN GLY SER ILE CYS LEU ASP ILE LEU SEQRES 8 B 149 ARG SER GLN TRP SER PRO ALA LEU THR VAL SER LYS VAL SEQRES 9 B 149 LEU LEU SER ILE CYS SER LEU LEU CYS ASP PRO ASN PRO SEQRES 10 B 149 ASP ASP PRO LEU VAL PRO ASP ILE ALA GLN ILE TYR LYS SEQRES 11 B 149 SER ASP LYS GLU LYS TYR ASN ARG HIS ALA ARG GLU TRP SEQRES 12 B 149 THR GLN LYS TYR ALA MET SEQRES 1 C 79 GLY ALA GLN GLN THR ARG VAL LEU GLN GLU LYS LEU ARG SEQRES 2 C 79 LYS LEU LYS GLU ALA MET LEU CYS MET VAL CYS CYS GLU SEQRES 3 C 79 GLU GLU ILE ASN SER THR PHE CYS PRO CYS GLY HIS THR SEQRES 4 C 79 VAL CYS CYS GLU SER CYS ALA ALA GLN LEU GLN SER CYS SEQRES 5 C 79 PRO VAL CYS ARG SER ARG VAL GLU HIS VAL GLN HIS VAL SEQRES 6 C 79 TYR LEU PRO THR HIS THR SER LEU LEU ASN LEU THR VAL SEQRES 7 C 79 ILE SEQRES 1 D 149 GLY ALA MET ALA LEU LYS ARG ILE GLN LYS GLU LEU SER SEQRES 2 D 149 ASP LEU GLN ARG ASP PRO PRO ALA HIS CYS SER ALA GLY SEQRES 3 D 149 PRO VAL GLY ASP ASP LEU PHE HIS TRP GLN ALA THR ILE SEQRES 4 D 149 MET GLY PRO PRO ASP SER ALA TYR GLN GLY GLY VAL PHE SEQRES 5 D 149 PHE LEU THR VAL HIS PHE PRO THR ASP TYR PRO PHE LYS SEQRES 6 D 149 PRO PRO LYS ILE ALA PHE THR THR LYS ILE TYR HIS PRO SEQRES 7 D 149 ASN ILE ASN SER ASN GLY SER ILE CYS LEU ASP ILE LEU SEQRES 8 D 149 ARG SER GLN TRP SER PRO ALA LEU THR VAL SER LYS VAL SEQRES 9 D 149 LEU LEU SER ILE CYS SER LEU LEU CYS ASP PRO ASN PRO SEQRES 10 D 149 ASP ASP PRO LEU VAL PRO ASP ILE ALA GLN ILE TYR LYS SEQRES 11 D 149 SER ASP LYS GLU LYS TYR ASN ARG HIS ALA ARG GLU TRP SEQRES 12 D 149 THR GLN LYS TYR ALA MET SEQRES 1 E 79 GLY ALA GLN GLN THR ARG VAL LEU GLN GLU LYS LEU ARG SEQRES 2 E 79 LYS LEU LYS GLU ALA MET LEU CYS MET VAL CYS CYS GLU SEQRES 3 E 79 GLU GLU ILE ASN SER THR PHE CYS PRO CYS GLY HIS THR SEQRES 4 E 79 VAL CYS CYS GLU SER CYS ALA ALA GLN LEU GLN SER CYS SEQRES 5 E 79 PRO VAL CYS ARG SER ARG VAL GLU HIS VAL GLN HIS VAL SEQRES 6 E 79 TYR LEU PRO THR HIS THR SER LEU LEU ASN LEU THR VAL SEQRES 7 E 79 ILE SEQRES 1 F 149 GLY ALA MET ALA LEU LYS ARG ILE GLN LYS GLU LEU SER SEQRES 2 F 149 ASP LEU GLN ARG ASP PRO PRO ALA HIS CYS SER ALA GLY SEQRES 3 F 149 PRO VAL GLY ASP ASP LEU PHE HIS TRP GLN ALA THR ILE SEQRES 4 F 149 MET GLY PRO PRO ASP SER ALA TYR GLN GLY GLY VAL PHE SEQRES 5 F 149 PHE LEU THR VAL HIS PHE PRO THR ASP TYR PRO PHE LYS SEQRES 6 F 149 PRO PRO LYS ILE ALA PHE THR THR LYS ILE TYR HIS PRO SEQRES 7 F 149 ASN ILE ASN SER ASN GLY SER ILE CYS LEU ASP ILE LEU SEQRES 8 F 149 ARG SER GLN TRP SER PRO ALA LEU THR VAL SER LYS VAL SEQRES 9 F 149 LEU LEU SER ILE CYS SER LEU LEU CYS ASP PRO ASN PRO SEQRES 10 F 149 ASP ASP PRO LEU VAL PRO ASP ILE ALA GLN ILE TYR LYS SEQRES 11 F 149 SER ASP LYS GLU LYS TYR ASN ARG HIS ALA ARG GLU TRP SEQRES 12 F 149 THR GLN LYS TYR ALA MET SEQRES 1 G 79 GLY ALA GLN GLN THR ARG VAL LEU GLN GLU LYS LEU ARG SEQRES 2 G 79 LYS LEU LYS GLU ALA MET LEU CYS MET VAL CYS CYS GLU SEQRES 3 G 79 GLU GLU ILE ASN SER THR PHE CYS PRO CYS GLY HIS THR SEQRES 4 G 79 VAL CYS CYS GLU SER CYS ALA ALA GLN LEU GLN SER CYS SEQRES 5 G 79 PRO VAL CYS ARG SER ARG VAL GLU HIS VAL GLN HIS VAL SEQRES 6 G 79 TYR LEU PRO THR HIS THR SER LEU LEU ASN LEU THR VAL SEQRES 7 G 79 ILE SEQRES 1 H 149 GLY ALA MET ALA LEU LYS ARG ILE GLN LYS GLU LEU SER SEQRES 2 H 149 ASP LEU GLN ARG ASP PRO PRO ALA HIS CYS SER ALA GLY SEQRES 3 H 149 PRO VAL GLY ASP ASP LEU PHE HIS TRP GLN ALA THR ILE SEQRES 4 H 149 MET GLY PRO PRO ASP SER ALA TYR GLN GLY GLY VAL PHE SEQRES 5 H 149 PHE LEU THR VAL HIS PHE PRO THR ASP TYR PRO PHE LYS SEQRES 6 H 149 PRO PRO LYS ILE ALA PHE THR THR LYS ILE TYR HIS PRO SEQRES 7 H 149 ASN ILE ASN SER ASN GLY SER ILE CYS LEU ASP ILE LEU SEQRES 8 H 149 ARG SER GLN TRP SER PRO ALA LEU THR VAL SER LYS VAL SEQRES 9 H 149 LEU LEU SER ILE CYS SER LEU LEU CYS ASP PRO ASN PRO SEQRES 10 H 149 ASP ASP PRO LEU VAL PRO ASP ILE ALA GLN ILE TYR LYS SEQRES 11 H 149 SER ASP LYS GLU LYS TYR ASN ARG HIS ALA ARG GLU TRP SEQRES 12 H 149 THR GLN LYS TYR ALA MET HET ZN A1001 1 HET ZN A1002 1 HET ACT A1439 4 HET ACT A1440 4 HET ACT B1148 4 HET ACT B1149 4 HET ZN C1001 1 HET ZN C1002 1 HET ZN E1001 1 HET ZN E1002 1 HET ACT F1148 4 HET ZN G1001 1 HET ZN G1002 1 HET ACT G1442 4 HET ACT H1148 4 HET ACT H1149 4 HET ACT H1150 4 HETNAM ZN ZINC ION HETNAM ACT ACETATE ION FORMUL 9 ZN 8(ZN 2+) FORMUL 11 ACT 9(C2 H3 O2 1-) FORMUL 26 HOH *406(H2 O) HELIX 1 1 VAL A 373 MET A 385 1 13 HELIX 2 2 CYS A 408 ALA A 413 1 6 HELIX 3 3 ALA B 2 ASP B 16 1 15 HELIX 4 4 LEU B 86 ARG B 90 5 5 HELIX 5 5 THR B 98 ASP B 112 1 15 HELIX 6 6 VAL B 120 ASP B 130 1 11 HELIX 7 7 ASP B 130 ALA B 146 1 17 HELIX 8 8 VAL C 373 MET C 385 1 13 HELIX 9 9 CYS C 408 ALA C 413 1 6 HELIX 10 10 ALA D 2 ASP D 16 1 15 HELIX 11 11 LEU D 86 ARG D 90 5 5 HELIX 12 12 THR D 98 ASP D 112 1 15 HELIX 13 13 VAL D 120 ASP D 130 1 11 HELIX 14 14 ASP D 130 ALA D 146 1 17 HELIX 15 15 LEU E 374 MET E 385 1 12 HELIX 16 16 CYS E 408 ALA E 413 1 6 HELIX 17 17 ALA F 2 ASP F 16 1 15 HELIX 18 18 LEU F 86 ARG F 90 5 5 HELIX 19 19 THR F 98 ASP F 112 1 15 HELIX 20 20 VAL F 120 ASP F 130 1 11 HELIX 21 21 ASP F 130 ALA F 146 1 17 HELIX 22 22 LEU G 374 MET G 385 1 12 HELIX 23 23 CYS G 408 GLN G 414 1 7 HELIX 24 24 ALA H 2 ASP H 16 1 15 HELIX 25 25 LEU H 86 ARG H 90 5 5 HELIX 26 26 THR H 98 ASP H 112 1 15 HELIX 27 27 VAL H 120 ASP H 130 1 11 HELIX 28 28 ASP H 130 ALA H 146 1 17 SHEET 1 AA 2 SER A 397 CYS A 400 0 SHEET 2 AA 2 HIS A 427 HIS A 430 -1 O HIS A 427 N CYS A 400 SHEET 1 BA 4 CYS B 21 PRO B 25 0 SHEET 2 BA 4 HIS B 32 MET B 38 -1 O GLN B 34 N GLY B 24 SHEET 3 BA 4 VAL B 49 HIS B 55 -1 O PHE B 50 N ILE B 37 SHEET 4 BA 4 LYS B 66 PHE B 69 -1 O LYS B 66 N HIS B 55 SHEET 1 CA 2 SER C 397 CYS C 400 0 SHEET 2 CA 2 HIS C 427 HIS C 430 -1 O HIS C 427 N CYS C 400 SHEET 1 DA 4 CYS D 21 VAL D 26 0 SHEET 2 DA 4 ASP D 29 MET D 38 -1 N ASP D 29 O VAL D 26 SHEET 3 DA 4 VAL D 49 HIS D 55 -1 O PHE D 50 N ILE D 37 SHEET 4 DA 4 LYS D 66 PHE D 69 -1 O LYS D 66 N HIS D 55 SHEET 1 EA 2 SER E 397 CYS E 400 0 SHEET 2 EA 2 HIS E 427 HIS E 430 -1 O HIS E 427 N CYS E 400 SHEET 1 FA 4 CYS F 21 VAL F 26 0 SHEET 2 FA 4 ASP F 29 MET F 38 -1 N ASP F 29 O VAL F 26 SHEET 3 FA 4 VAL F 49 HIS F 55 -1 O PHE F 50 N ILE F 37 SHEET 4 FA 4 LYS F 66 PHE F 69 -1 O LYS F 66 N HIS F 55 SHEET 1 GA 2 SER G 397 CYS G 400 0 SHEET 2 GA 2 HIS G 427 HIS G 430 -1 O HIS G 427 N CYS G 400 SHEET 1 HA 4 CYS H 21 PRO H 25 0 SHEET 2 HA 4 HIS H 32 MET H 38 -1 O GLN H 34 N GLY H 24 SHEET 3 HA 4 VAL H 49 HIS H 55 -1 O PHE H 50 N ILE H 37 SHEET 4 HA 4 LYS H 66 PHE H 69 -1 O LYS H 66 N HIS H 55 LINK SG CYS A 387 ZN ZN A1001 1555 1555 2.40 LINK SG CYS A 390 ZN ZN A1001 1555 1555 2.35 LINK SG CYS A 402 ZN ZN A1002 1555 1555 2.30 LINK ND1 HIS A 404 ZN ZN A1002 1555 1555 2.00 LINK SG CYS A 408 ZN ZN A1001 1555 1555 2.29 LINK SG CYS A 411 ZN ZN A1001 1555 1555 2.33 LINK SG CYS A 418 ZN ZN A1002 1555 1555 2.34 LINK SG CYS A 421 ZN ZN A1002 1555 1555 2.35 LINK SG CYS C 387 ZN ZN C1001 1555 1555 2.39 LINK SG CYS C 390 ZN ZN C1001 1555 1555 2.36 LINK SG CYS C 402 ZN ZN C1002 1555 1555 2.38 LINK ND1 HIS C 404 ZN ZN C1002 1555 1555 2.07 LINK SG CYS C 408 ZN ZN C1001 1555 1555 2.33 LINK SG CYS C 411 ZN ZN C1001 1555 1555 2.35 LINK SG CYS C 418 ZN ZN C1002 1555 1555 2.34 LINK SG CYS C 421 ZN ZN C1002 1555 1555 2.29 LINK SG CYS E 387 ZN ZN E1001 1555 1555 2.35 LINK SG CYS E 390 ZN ZN E1001 1555 1555 2.42 LINK SG CYS E 402 ZN ZN E1002 1555 1555 2.31 LINK ND1 HIS E 404 ZN ZN E1002 1555 1555 2.05 LINK SG CYS E 408 ZN ZN E1001 1555 1555 2.41 LINK SG CYS E 411 ZN ZN E1001 1555 1555 2.30 LINK SG CYS E 418 ZN ZN E1002 1555 1555 2.36 LINK SG CYS E 421 ZN ZN E1002 1555 1555 2.31 LINK SG CYS G 387 ZN ZN G1001 1555 1555 2.39 LINK SG CYS G 390 ZN ZN G1001 1555 1555 2.18 LINK SG CYS G 402 ZN ZN G1002 1555 1555 2.34 LINK ND1 HIS G 404 ZN ZN G1002 1555 1555 1.96 LINK SG CYS G 408 ZN ZN G1001 1555 1555 2.33 LINK SG CYS G 411 ZN ZN G1001 1555 1555 2.38 LINK SG CYS G 418 ZN ZN G1002 1555 1555 2.35 LINK SG CYS G 421 ZN ZN G1002 1555 1555 2.46 CISPEP 1 CYS A 400 PRO A 401 0 8.46 CISPEP 2 TYR B 60 PRO B 61 0 0.19 CISPEP 3 CYS C 400 PRO C 401 0 9.15 CISPEP 4 TYR D 60 PRO D 61 0 4.94 CISPEP 5 CYS E 400 PRO E 401 0 7.30 CISPEP 6 TYR F 60 PRO F 61 0 1.60 CISPEP 7 CYS G 400 PRO G 401 0 6.53 CISPEP 8 TYR H 60 PRO H 61 0 4.37 SITE 1 AC1 4 CYS A 387 CYS A 390 CYS A 408 CYS A 411 SITE 1 AC2 4 CYS A 402 HIS A 404 CYS A 418 CYS A 421 SITE 1 AC3 5 CYS C 387 CYS C 390 CYS C 408 CYS C 411 SITE 2 AC3 5 GLY F -1 SITE 1 AC4 4 CYS C 402 HIS C 404 CYS C 418 CYS C 421 SITE 1 AC5 4 CYS E 387 CYS E 390 CYS E 408 CYS E 411 SITE 1 AC6 4 CYS E 402 HIS E 404 CYS E 418 CYS E 421 SITE 1 AC7 4 CYS G 387 CYS G 390 CYS G 408 CYS G 411 SITE 1 AC8 4 CYS G 402 HIS G 404 CYS G 418 CYS G 421 SITE 1 AC9 3 ILE H 67 ILE H 84 HOH H2034 SITE 1 BC1 5 GLU G 383 ALA G 384 LEU G 386 MET G 388 SITE 2 BC1 5 HOH G2024 SITE 1 BC2 2 ARG H 5 LYS H 8 SITE 1 BC3 3 ILE B 67 ILE B 84 HOH B2041 SITE 1 BC4 3 ILE F 67 SER F 83 ILE F 84 SITE 1 BC5 5 PHE B 69 THR B 70 SER B 80 GLY B 82 SITE 2 BC5 5 HOH B2043 SITE 1 BC6 4 GLU A 383 ALA A 384 LEU A 386 HOH A2010 SITE 1 BC7 4 SER D 105 SER D 108 PRO H 57 THR H 58 SITE 1 BC8 1 HIS A 404 CRYST1 57.690 137.870 63.750 90.00 106.39 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017334 0.000000 0.005098 0.00000 SCALE2 0.000000 0.007253 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016351 0.00000