data_2YPA # _entry.id 2YPA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2YPA PDBE EBI-54634 WWPDB D_1290054634 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1HLH unspecified . PDB 2XJY unspecified 'CRYSTAL STRUCTURE OF THE LMO2:LDB1-LID COMPLEX, P21 CRYSTAL FORM' PDB 2XJZ unspecified 'CRYSTAL STRUCTURE OF THE LMO2:LDB1-LID COMPLEX, C2 CRYSTAL FORM' PDB 2YPB unspecified 'STRUCTURE OF THE SCL:E47 COMPLEX BOUND TO DNA' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YPA _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-10-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'El Omari, K.' 1 'Hoosdally, S.J.' 2 'Tuladhar, K.' 3 'Karia, D.' 4 'Ponsele, E.' 5 'Platonova, O.' 6 'Vyas, P.' 7 'Patient, R.' 8 'Porcher, C.' 9 'Mancini, E.J.' 10 # _citation.id primary _citation.title 'Structural Basis for Lmo2-Driven Recruitment of the Scl:E47bHLH Heterodimer to Hematopoietic-Specific Transcriptional Targets.' _citation.journal_abbrev 'Cell Rep.' _citation.journal_volume 4 _citation.page_first 135 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2211-1247 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23831025 _citation.pdbx_database_id_DOI 10.1016/J.CELREP.2013.06.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'El Omari, K.' 1 primary 'Hoosdally, S.J.' 2 primary 'Tuladhar, K.' 3 primary 'Karia, D.' 4 primary 'Hall-Ponsele, E.' 5 primary 'Platonova, O.' 6 primary 'Vyas, P.' 7 primary 'Patient, R.' 8 primary 'Porcher, C.' 9 primary 'Mancini, E.J.' 10 # _cell.entry_id 2YPA _cell.length_a 102.966 _cell.length_b 141.044 _cell.length_c 148.793 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YPA _symmetry.space_group_name_H-M 'F 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1' 10721.119 1 ? ? 'BHLH, RESIDUES 180-253' ? 2 polymer man 'TRANSCRIPTION FACTOR E2-ALPHA' 9674.212 1 ? ? 'RESIDUES 535-613' ? 3 polymer man RHOMBOTIN-2 17007.609 1 ? ? 'LIM, RESIDUES 25-156' ? 4 polymer man 'LIM DOMAIN-BINDING PROTEIN 1' 5244.568 1 ? ? 'LID, RESIDUES 336-375' ? 5 polymer syn 'EBOX FORWARD' 3284.160 1 ? ? ? ? 6 polymer syn 'EBOX REVERSE' 3422.260 1 ? ? ? ? 7 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'TAL-1, CLASS A BASIC HELIX-LOOP-HELIX PROTEIN 17, BHLHA17, STEM CELL PROTEIN, T-CELL LEUKEMIA/LYMPHOMA PROTEIN 5, SCL' 2 ;CLASS B BASIC HELIX-LOOP-HELIX PROTEIN 21, BHLHB21, IMMUNOGLOBULIN ENHANCER-BINDING FACTOR E12/E47, IMMUNOGLOBULIN TRANSCRIPT ION FACTOR 1, KAPPA-E2-BINDING FACTOR, TRANSCRIPTION FACTOR 3, TCF-3, TRANSCRIPTION FACTOR ITF-1, E47 ; 3 'CYSTEINE-RICH PROTEIN TTG-2, LIM DOMAIN ONLY PROTEIN 2, LMO-2, T-CELL TRANSLOCATION PROTEIN 2, LMO2' 4 'LDB-1, CARBOXYL-TERMINAL LIM DOMAIN-BINDING PROTEIN 2, CLIM-2, LIM DOMAIN-BINDING FACTOR CLIM2, HLDB1, NUCLEAR LIM INTERACTOR, LDB1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSQDPEISDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKL LNDQEEEGTQR ; ;MGSSHHHHHHSQDPEISDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKL LNDQEEEGTQR ; A ? 2 'polypeptide(L)' no no ;MADLSLEEKDLRDRERRMANNARERVRVRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLNPK AA ; ;MADLSLEEKDLRDRERRMANNARERVRVRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLNPK AA ; B ? 3 'polypeptide(L)' no no ;MGSSHHHHHHSQDPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQD GLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYEWTKING ; ;MGSSHHHHHHSQDPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQD GLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYEWTKING ; C ? 4 'polypeptide(L)' no no GGSGGHMGSGGDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDE GGSGGHMGSGGDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDE D ? 5 polydeoxyribonucleotide no no '(DA)(DC)(DC)(DA)(DT)(DC)(DT)(DG)(DT)(DT)(DC)' ACCATCTGTTC E ? 6 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DC)(DA)(DG)(DA)(DT)(DG)(DG)(DT)' GAACAGATGGT F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 GLN n 1 13 ASP n 1 14 PRO n 1 15 GLU n 1 16 ILE n 1 17 SER n 1 18 ASP n 1 19 GLY n 1 20 PRO n 1 21 HIS n 1 22 THR n 1 23 LYS n 1 24 VAL n 1 25 VAL n 1 26 ARG n 1 27 ARG n 1 28 ILE n 1 29 PHE n 1 30 THR n 1 31 ASN n 1 32 SER n 1 33 ARG n 1 34 GLU n 1 35 ARG n 1 36 TRP n 1 37 ARG n 1 38 GLN n 1 39 GLN n 1 40 ASN n 1 41 VAL n 1 42 ASN n 1 43 GLY n 1 44 ALA n 1 45 PHE n 1 46 ALA n 1 47 GLU n 1 48 LEU n 1 49 ARG n 1 50 LYS n 1 51 LEU n 1 52 ILE n 1 53 PRO n 1 54 THR n 1 55 HIS n 1 56 PRO n 1 57 PRO n 1 58 ASP n 1 59 LYS n 1 60 LYS n 1 61 LEU n 1 62 SER n 1 63 LYS n 1 64 ASN n 1 65 GLU n 1 66 ILE n 1 67 LEU n 1 68 ARG n 1 69 LEU n 1 70 ALA n 1 71 MET n 1 72 LYS n 1 73 TYR n 1 74 ILE n 1 75 ASN n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 LYS n 1 80 LEU n 1 81 LEU n 1 82 ASN n 1 83 ASP n 1 84 GLN n 1 85 GLU n 1 86 GLU n 1 87 GLU n 1 88 GLY n 1 89 THR n 1 90 GLN n 1 91 ARG n 2 1 MET n 2 2 ALA n 2 3 ASP n 2 4 LEU n 2 5 SER n 2 6 LEU n 2 7 GLU n 2 8 GLU n 2 9 LYS n 2 10 ASP n 2 11 LEU n 2 12 ARG n 2 13 ASP n 2 14 ARG n 2 15 GLU n 2 16 ARG n 2 17 ARG n 2 18 MET n 2 19 ALA n 2 20 ASN n 2 21 ASN n 2 22 ALA n 2 23 ARG n 2 24 GLU n 2 25 ARG n 2 26 VAL n 2 27 ARG n 2 28 VAL n 2 29 ARG n 2 30 ASP n 2 31 ILE n 2 32 ASN n 2 33 GLU n 2 34 ALA n 2 35 PHE n 2 36 ARG n 2 37 GLU n 2 38 LEU n 2 39 GLY n 2 40 ARG n 2 41 MET n 2 42 CYS n 2 43 GLN n 2 44 MET n 2 45 HIS n 2 46 LEU n 2 47 LYS n 2 48 SER n 2 49 ASP n 2 50 LYS n 2 51 ALA n 2 52 GLN n 2 53 THR n 2 54 LYS n 2 55 LEU n 2 56 LEU n 2 57 ILE n 2 58 LEU n 2 59 GLN n 2 60 GLN n 2 61 ALA n 2 62 VAL n 2 63 GLN n 2 64 VAL n 2 65 ILE n 2 66 LEU n 2 67 GLY n 2 68 LEU n 2 69 GLU n 2 70 GLN n 2 71 GLN n 2 72 VAL n 2 73 ARG n 2 74 GLU n 2 75 ARG n 2 76 ASN n 2 77 LEU n 2 78 ASN n 2 79 PRO n 2 80 LYS n 2 81 ALA n 2 82 ALA n 3 1 MET n 3 2 GLY n 3 3 SER n 3 4 SER n 3 5 HIS n 3 6 HIS n 3 7 HIS n 3 8 HIS n 3 9 HIS n 3 10 HIS n 3 11 SER n 3 12 GLN n 3 13 ASP n 3 14 PRO n 3 15 SER n 3 16 LEU n 3 17 LEU n 3 18 THR n 3 19 CYS n 3 20 GLY n 3 21 GLY n 3 22 CYS n 3 23 GLN n 3 24 GLN n 3 25 ASN n 3 26 ILE n 3 27 GLY n 3 28 ASP n 3 29 ARG n 3 30 TYR n 3 31 PHE n 3 32 LEU n 3 33 LYS n 3 34 ALA n 3 35 ILE n 3 36 ASP n 3 37 GLN n 3 38 TYR n 3 39 TRP n 3 40 HIS n 3 41 GLU n 3 42 ASP n 3 43 CYS n 3 44 LEU n 3 45 SER n 3 46 CYS n 3 47 ASP n 3 48 LEU n 3 49 CYS n 3 50 GLY n 3 51 CYS n 3 52 ARG n 3 53 LEU n 3 54 GLY n 3 55 GLU n 3 56 VAL n 3 57 GLY n 3 58 ARG n 3 59 ARG n 3 60 LEU n 3 61 TYR n 3 62 TYR n 3 63 LYS n 3 64 LEU n 3 65 GLY n 3 66 ARG n 3 67 LYS n 3 68 LEU n 3 69 CYS n 3 70 ARG n 3 71 ARG n 3 72 ASP n 3 73 TYR n 3 74 LEU n 3 75 ARG n 3 76 LEU n 3 77 PHE n 3 78 GLY n 3 79 GLN n 3 80 ASP n 3 81 GLY n 3 82 LEU n 3 83 CYS n 3 84 ALA n 3 85 SER n 3 86 CYS n 3 87 ASP n 3 88 LYS n 3 89 ARG n 3 90 ILE n 3 91 ARG n 3 92 ALA n 3 93 TYR n 3 94 GLU n 3 95 MET n 3 96 THR n 3 97 MET n 3 98 ARG n 3 99 VAL n 3 100 LYS n 3 101 ASP n 3 102 LYS n 3 103 VAL n 3 104 TYR n 3 105 HIS n 3 106 LEU n 3 107 GLU n 3 108 CYS n 3 109 PHE n 3 110 LYS n 3 111 CYS n 3 112 ALA n 3 113 ALA n 3 114 CYS n 3 115 GLN n 3 116 LYS n 3 117 HIS n 3 118 PHE n 3 119 CYS n 3 120 VAL n 3 121 GLY n 3 122 ASP n 3 123 ARG n 3 124 TYR n 3 125 LEU n 3 126 LEU n 3 127 ILE n 3 128 ASN n 3 129 SER n 3 130 ASP n 3 131 ILE n 3 132 VAL n 3 133 CYS n 3 134 GLU n 3 135 GLN n 3 136 ASP n 3 137 ILE n 3 138 TYR n 3 139 GLU n 3 140 TRP n 3 141 THR n 3 142 LYS n 3 143 ILE n 3 144 ASN n 3 145 GLY n 4 1 GLY n 4 2 GLY n 4 3 SER n 4 4 GLY n 4 5 GLY n 4 6 HIS n 4 7 MET n 4 8 GLY n 4 9 SER n 4 10 GLY n 4 11 GLY n 4 12 ASP n 4 13 VAL n 4 14 MET n 4 15 VAL n 4 16 VAL n 4 17 GLY n 4 18 GLU n 4 19 PRO n 4 20 THR n 4 21 LEU n 4 22 MET n 4 23 GLY n 4 24 GLY n 4 25 GLU n 4 26 PHE n 4 27 GLY n 4 28 ASP n 4 29 GLU n 4 30 ASP n 4 31 GLU n 4 32 ARG n 4 33 LEU n 4 34 ILE n 4 35 THR n 4 36 ARG n 4 37 LEU n 4 38 GLU n 4 39 ASN n 4 40 THR n 4 41 GLN n 4 42 PHE n 4 43 ASP n 4 44 ALA n 4 45 ALA n 4 46 ASN n 4 47 GLY n 4 48 ILE n 4 49 ASP n 4 50 ASP n 4 51 GLU n 5 1 DA n 5 2 DC n 5 3 DC n 5 4 DA n 5 5 DT n 5 6 DC n 5 7 DT n 5 8 DG n 5 9 DT n 5 10 DT n 5 11 DC n 6 1 DG n 6 2 DA n 6 3 DA n 6 4 DC n 6 5 DA n 6 6 DG n 6 7 DA n 6 8 DT n 6 9 DG n 6 10 DG n 6 11 DT n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 5 1 sample ? ? 'HOMO SAPIENS' ? 9606 ? 6 1 sample ? ? 'HOMO SAPIENS' ? 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP TAL1_HUMAN 1 ? ? P17542 ? 2 UNP TFE2_HUMAN 2 ? ? P15923 ? 3 UNP RBTN2_HUMAN 3 ? ? P25791 ? 4 UNP LDB1_HUMAN 4 ? ? Q86U70 ? 5 PDB 2YPA 5 ? ? 2YPA ? 6 PDB 2YPA 6 ? ? 2YPA ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YPA A 18 ? 91 ? P17542 180 ? 253 ? 180 253 2 2 2YPA B 4 ? 82 ? P15923 535 ? 613 ? 535 613 3 3 2YPA C 14 ? 145 ? P25791 25 ? 156 ? 25 156 4 4 2YPA D 12 ? 51 ? Q86U70 336 ? 375 ? 300 339 5 5 2YPA E 1 ? 11 ? 2YPA 4 ? 14 ? 4 14 6 6 2YPA F 1 ? 11 ? 2YPA 22 ? 32 ? 22 32 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YPA MET A 1 ? UNP P17542 ? ? 'expression tag' 163 1 1 2YPA GLY A 2 ? UNP P17542 ? ? 'expression tag' 164 2 1 2YPA SER A 3 ? UNP P17542 ? ? 'expression tag' 165 3 1 2YPA SER A 4 ? UNP P17542 ? ? 'expression tag' 166 4 1 2YPA HIS A 5 ? UNP P17542 ? ? 'expression tag' 167 5 1 2YPA HIS A 6 ? UNP P17542 ? ? 'expression tag' 168 6 1 2YPA HIS A 7 ? UNP P17542 ? ? 'expression tag' 169 7 1 2YPA HIS A 8 ? UNP P17542 ? ? 'expression tag' 170 8 1 2YPA HIS A 9 ? UNP P17542 ? ? 'expression tag' 171 9 1 2YPA HIS A 10 ? UNP P17542 ? ? 'expression tag' 172 10 1 2YPA SER A 11 ? UNP P17542 ? ? 'expression tag' 173 11 1 2YPA GLN A 12 ? UNP P17542 ? ? 'expression tag' 174 12 1 2YPA ASP A 13 ? UNP P17542 ? ? 'expression tag' 175 13 1 2YPA PRO A 14 ? UNP P17542 ? ? 'expression tag' 176 14 1 2YPA GLU A 15 ? UNP P17542 ? ? 'expression tag' 177 15 1 2YPA ILE A 16 ? UNP P17542 ? ? 'expression tag' 178 16 1 2YPA SER A 17 ? UNP P17542 ? ? 'expression tag' 179 17 2 2YPA MET B 1 ? UNP P15923 ? ? 'expression tag' 532 18 2 2YPA ALA B 2 ? UNP P15923 ? ? 'expression tag' 533 19 2 2YPA ASP B 3 ? UNP P15923 ? ? 'expression tag' 534 20 3 2YPA MET C 1 ? UNP P25791 ? ? 'expression tag' 12 21 3 2YPA GLY C 2 ? UNP P25791 ? ? 'expression tag' 13 22 3 2YPA SER C 3 ? UNP P25791 ? ? 'expression tag' 14 23 3 2YPA SER C 4 ? UNP P25791 ? ? 'expression tag' 15 24 3 2YPA HIS C 5 ? UNP P25791 ? ? 'expression tag' 16 25 3 2YPA HIS C 6 ? UNP P25791 ? ? 'expression tag' 17 26 3 2YPA HIS C 7 ? UNP P25791 ? ? 'expression tag' 18 27 3 2YPA HIS C 8 ? UNP P25791 ? ? 'expression tag' 19 28 3 2YPA HIS C 9 ? UNP P25791 ? ? 'expression tag' 20 29 3 2YPA HIS C 10 ? UNP P25791 ? ? 'expression tag' 21 30 3 2YPA SER C 11 ? UNP P25791 ? ? 'expression tag' 22 31 3 2YPA GLN C 12 ? UNP P25791 ? ? 'expression tag' 23 32 3 2YPA ASP C 13 ? UNP P25791 ? ? 'expression tag' 24 33 4 2YPA GLY D 1 ? UNP Q86U70 ? ? 'expression tag' 289 34 4 2YPA GLY D 2 ? UNP Q86U70 ? ? 'expression tag' 290 35 4 2YPA SER D 3 ? UNP Q86U70 ? ? 'expression tag' 291 36 4 2YPA GLY D 4 ? UNP Q86U70 ? ? 'expression tag' 292 37 4 2YPA GLY D 5 ? UNP Q86U70 ? ? 'expression tag' 293 38 4 2YPA HIS D 6 ? UNP Q86U70 ? ? 'expression tag' 294 39 4 2YPA MET D 7 ? UNP Q86U70 ? ? 'expression tag' 295 40 4 2YPA GLY D 8 ? UNP Q86U70 ? ? 'expression tag' 296 41 4 2YPA SER D 9 ? UNP Q86U70 ? ? 'expression tag' 297 42 4 2YPA GLY D 10 ? UNP Q86U70 ? ? 'expression tag' 298 43 4 2YPA GLY D 11 ? UNP Q86U70 ? ? 'expression tag' 299 44 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2YPA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.7 _exptl_crystal.density_percent_sol 59 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '5 % (V/V) 2-METHYL-2, 4-PENTANEDIOL (MPD), 40 MM MAGNESIUM CHLORIDE, 50 MM SODIUM CACODYLATE PH 6.0 AND 2MM GLUTATHIONE' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2829 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength 1.2829 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YPA _reflns.observed_criterion_sigma_I 1.2 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 2.60 _reflns.number_obs 16249 _reflns.number_all ? _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.00 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 0.9 _reflns_shell.Rmerge_I_obs 0.87 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.20 _reflns_shell.pdbx_redundancy 2.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YPA _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12714 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.15 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 98.47 _refine.ls_R_factor_obs 0.22614 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22401 _refine.ls_R_factor_R_free 0.26945 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 641 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.917 _refine.B_iso_mean 91.707 _refine.aniso_B[1][1] 6.15 _refine.aniso_B[2][2] 1.15 _refine.aniso_B[3][3] -7.30 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.U VALUES WITH TLS ADDED' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.022 _refine.pdbx_overall_ESU_R_Free 0.368 _refine.overall_SU_ML 0.334 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 39.437 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2442 _refine_hist.pdbx_number_atoms_nucleic_acid 448 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2894 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 30.15 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.018 ? 2976 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2687 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.979 1.814 ? 4078 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.789 3.000 ? 6166 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.310 5.000 ? 292 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.339 23.088 ? 136 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.417 15.000 ? 492 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.346 15.000 ? 33 'X-RAY DIFFRACTION' ? r_chiral_restr 0.053 0.200 ? 418 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 3048 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 716 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.872 _refine_ls_shell.number_reflns_R_work 931 _refine_ls_shell.R_factor_R_work 0.408 _refine_ls_shell.percent_reflns_obs 98.99 _refine_ls_shell.R_factor_R_free 0.361 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2YPA _struct.title 'Structure of the SCL:E47:LMO2:LDB1 complex bound to DNA' _struct.pdbx_descriptor 'T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1, TRANSCRIPTION FACTOR E2-ALPHA, RHOMBOTIN-2, LIM DOMAIN-BINDING PROTEIN 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YPA _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'IMMUNE SYSTEM, HEMATOPOIESIS, LEUKEMIA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 7 ? J N N 7 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 21 ? LYS A 50 ? HIS A 183 LYS A 212 1 ? 30 HELX_P HELX_P2 2 SER A 62 ? GLN A 84 ? SER A 224 GLN A 246 1 ? 23 HELX_P HELX_P3 3 GLU B 8 ? LYS B 47 ? GLU B 539 LYS B 578 1 ? 40 HELX_P HELX_P4 4 THR B 53 ? ASN B 78 ? THR B 584 ASN B 609 1 ? 26 HELX_P HELX_P5 5 CYS C 69 ? GLY C 78 ? CYS C 80 GLY C 89 1 ? 10 HELX_P HELX_P6 6 ASP C 136 ? ILE C 143 ? ASP C 147 ILE C 154 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C ASP 72 OD2 ? ? ? 1_555 I ZN . ZN ? ? C ASP 83 C ZN 1158 1_555 ? ? ? ? ? ? ? 1.673 ? metalc2 metalc ? ? G ZN . ZN ? ? ? 1_555 C ASP 136 OD2 ? ? C ZN 1156 C ASP 147 1_555 ? ? ? ? ? ? ? 2.131 ? metalc3 metalc ? ? G ZN . ZN ? ? ? 1_555 C CYS 111 SG ? ? C ZN 1156 C CYS 122 1_555 ? ? ? ? ? ? ? 2.371 ? metalc4 metalc ? ? G ZN . ZN ? ? ? 1_555 C CYS 133 SG ? ? C ZN 1156 C CYS 144 1_555 ? ? ? ? ? ? ? 2.398 ? metalc5 metalc ? ? G ZN . ZN ? ? ? 1_555 C CYS 114 SG ? ? C ZN 1156 C CYS 125 1_555 ? ? ? ? ? ? ? 2.091 ? metalc6 metalc ? ? H ZN . ZN ? ? ? 1_555 C CYS 86 SG ? ? C ZN 1157 C CYS 97 1_555 ? ? ? ? ? ? ? 1.932 ? metalc7 metalc ? ? H ZN . ZN ? ? ? 1_555 C HIS 105 ND1 ? ? C ZN 1157 C HIS 116 1_555 ? ? ? ? ? ? ? 2.520 ? metalc8 metalc ? ? H ZN . ZN ? ? ? 1_555 C CYS 108 SG ? ? C ZN 1157 C CYS 119 1_555 ? ? ? ? ? ? ? 2.408 ? metalc9 metalc ? ? H ZN . ZN ? ? ? 1_555 C CYS 83 SG ? ? C ZN 1157 C CYS 94 1_555 ? ? ? ? ? ? ? 2.458 ? metalc10 metalc ? ? I ZN . ZN ? ? ? 1_555 C CYS 69 SG ? ? C ZN 1158 C CYS 80 1_555 ? ? ? ? ? ? ? 2.384 ? metalc11 metalc ? ? I ZN . ZN ? ? ? 1_555 C CYS 46 SG ? ? C ZN 1158 C CYS 57 1_555 ? ? ? ? ? ? ? 2.382 ? metalc12 metalc ? ? I ZN . ZN ? ? ? 1_555 C CYS 49 SG ? ? C ZN 1158 C CYS 60 1_555 ? ? ? ? ? ? ? 2.106 ? metalc13 metalc ? ? J ZN . ZN ? ? ? 1_555 C CYS 19 SG ? ? C ZN 1159 C CYS 30 1_555 ? ? ? ? ? ? ? 2.409 ? metalc14 metalc ? ? J ZN . ZN ? ? ? 1_555 C CYS 22 SG ? ? C ZN 1159 C CYS 33 1_555 ? ? ? ? ? ? ? 2.100 ? metalc15 metalc ? ? J ZN . ZN ? ? ? 1_555 C CYS 43 SG ? ? C ZN 1159 C CYS 54 1_555 ? ? ? ? ? ? ? 2.406 ? hydrog1 hydrog ? ? E DA 1 N1 ? ? ? 1_555 F DT 11 N3 ? ? E DA 4 F DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? E DA 1 N6 ? ? ? 1_555 F DT 11 O4 ? ? E DA 4 F DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 5 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 5 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 5 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 9 N1 ? ? E DC 6 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 9 O6 ? ? E DC 6 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 9 N2 ? ? E DC 6 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 8 N3 ? ? E DA 7 F DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 8 O4 ? ? E DA 7 F DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? E DT 5 N3 ? ? ? 1_555 F DA 7 N1 ? ? E DT 8 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? E DT 5 O4 ? ? ? 1_555 F DA 7 N6 ? ? E DT 8 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? E DC 6 N3 ? ? ? 1_555 F DG 6 N1 ? ? E DC 9 F DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? E DC 6 N4 ? ? ? 1_555 F DG 6 O6 ? ? E DC 9 F DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? E DC 6 O2 ? ? ? 1_555 F DG 6 N2 ? ? E DC 9 F DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DA 5 N1 ? ? E DT 10 F DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? E DT 7 O4 ? ? ? 1_555 F DA 5 N6 ? ? E DT 10 F DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? E DG 8 N1 ? ? ? 1_555 F DC 4 N3 ? ? E DG 11 F DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? E DG 8 N2 ? ? ? 1_555 F DC 4 O2 ? ? E DG 11 F DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? E DG 8 O6 ? ? ? 1_555 F DC 4 N4 ? ? E DG 11 F DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? E DT 9 N3 ? ? ? 1_555 F DA 3 N1 ? ? E DT 12 F DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? E DT 9 O4 ? ? ? 1_555 F DA 3 N6 ? ? E DT 12 F DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? E DT 10 N3 ? ? ? 1_555 F DA 2 N1 ? ? E DT 13 F DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? E DT 10 O4 ? ? ? 1_555 F DA 2 N6 ? ? E DT 13 F DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 14 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 14 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 14 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 55 A . ? HIS 217 A PRO 56 A ? PRO 218 A 1 -0.88 2 VAL 56 C . ? VAL 67 C GLY 57 C ? GLY 68 C 1 -3.98 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details CA ? 3 ? CB ? 3 ? CC ? 2 ? CD ? 3 ? CE ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense CA 1 2 ? anti-parallel CA 2 3 ? anti-parallel CB 1 2 ? anti-parallel CB 2 3 ? anti-parallel CC 1 2 ? anti-parallel CD 1 2 ? anti-parallel CD 2 3 ? anti-parallel CE 1 2 ? anti-parallel CE 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id CA 1 GLN C 37 ? TRP C 39 ? GLN C 48 TRP C 50 CA 2 TYR C 30 ? ALA C 34 ? TYR C 41 ALA C 45 CA 3 THR D 35 ? GLU D 38 ? THR D 323 GLU D 326 CB 1 ARG C 66 ? LEU C 68 ? ARG C 77 LEU C 79 CB 2 LEU C 60 ? LYS C 63 ? LEU C 71 LYS C 74 CB 3 GLU D 31 ? ARG D 32 ? GLU D 319 ARG D 320 CC 1 GLY C 81 ? LEU C 82 ? GLY C 92 LEU C 93 CC 2 ARG C 89 ? ILE C 90 ? ARG C 100 ILE C 101 CD 1 LYS C 102 ? HIS C 105 ? LYS C 113 HIS C 116 CD 2 MET C 95 ? VAL C 99 ? MET C 106 VAL C 110 CD 3 THR D 20 ? LEU D 21 ? THR D 308 LEU D 309 CE 1 ASP C 130 ? CYS C 133 ? ASP C 141 CYS C 144 CE 2 ARG C 123 ? ILE C 127 ? ARG C 134 ILE C 138 CE 3 VAL D 13 ? VAL D 15 ? VAL D 301 VAL D 303 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id CA 1 2 N TRP C 39 ? N TRP C 50 O LEU C 32 ? O LEU C 43 CA 2 3 N LYS C 33 ? N LYS C 44 O THR D 35 ? O THR D 323 CB 1 2 N LEU C 68 ? N LEU C 79 O TYR C 61 ? O TYR C 72 CB 2 3 N LEU C 60 ? N LEU C 71 O ARG D 32 ? O ARG D 320 CC 1 2 N GLY C 81 ? N GLY C 92 O ILE C 90 ? O ILE C 101 CD 1 2 N TYR C 104 ? N TYR C 115 O MET C 97 ? O MET C 108 CD 2 3 N THR C 96 ? N THR C 107 O THR D 20 ? O THR D 308 CE 1 2 N VAL C 132 ? N VAL C 143 O LEU C 125 ? O LEU C 136 CE 2 3 N TYR C 124 ? N TYR C 135 O MET D 14 ? O MET D 302 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 1156' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 1157' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 1158' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 1159' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 111 ? CYS C 122 . ? 1_555 ? 2 AC1 4 CYS C 114 ? CYS C 125 . ? 1_555 ? 3 AC1 4 CYS C 133 ? CYS C 144 . ? 1_555 ? 4 AC1 4 ASP C 136 ? ASP C 147 . ? 1_555 ? 5 AC2 4 CYS C 83 ? CYS C 94 . ? 1_555 ? 6 AC2 4 CYS C 86 ? CYS C 97 . ? 1_555 ? 7 AC2 4 HIS C 105 ? HIS C 116 . ? 1_555 ? 8 AC2 4 CYS C 108 ? CYS C 119 . ? 1_555 ? 9 AC3 4 CYS C 46 ? CYS C 57 . ? 1_555 ? 10 AC3 4 CYS C 49 ? CYS C 60 . ? 1_555 ? 11 AC3 4 CYS C 69 ? CYS C 80 . ? 1_555 ? 12 AC3 4 ASP C 72 ? ASP C 83 . ? 1_555 ? 13 AC4 4 CYS C 19 ? CYS C 30 . ? 1_555 ? 14 AC4 4 CYS C 22 ? CYS C 33 . ? 1_555 ? 15 AC4 4 HIS C 40 ? HIS C 51 . ? 1_555 ? 16 AC4 4 CYS C 43 ? CYS C 54 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YPA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YPA _atom_sites.fract_transf_matrix[1][1] 0.009712 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007090 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006721 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 163 ? ? ? A . n A 1 2 GLY 2 164 ? ? ? A . n A 1 3 SER 3 165 ? ? ? A . n A 1 4 SER 4 166 ? ? ? A . n A 1 5 HIS 5 167 ? ? ? A . n A 1 6 HIS 6 168 ? ? ? A . n A 1 7 HIS 7 169 ? ? ? A . n A 1 8 HIS 8 170 ? ? ? A . n A 1 9 HIS 9 171 ? ? ? A . n A 1 10 HIS 10 172 ? ? ? A . n A 1 11 SER 11 173 ? ? ? A . n A 1 12 GLN 12 174 ? ? ? A . n A 1 13 ASP 13 175 ? ? ? A . n A 1 14 PRO 14 176 ? ? ? A . n A 1 15 GLU 15 177 ? ? ? A . n A 1 16 ILE 16 178 ? ? ? A . n A 1 17 SER 17 179 ? ? ? A . n A 1 18 ASP 18 180 ? ? ? A . n A 1 19 GLY 19 181 ? ? ? A . n A 1 20 PRO 20 182 182 PRO PRO A . n A 1 21 HIS 21 183 183 HIS HIS A . n A 1 22 THR 22 184 184 THR THR A . n A 1 23 LYS 23 185 185 LYS LYS A . n A 1 24 VAL 24 186 186 VAL VAL A . n A 1 25 VAL 25 187 187 VAL VAL A . n A 1 26 ARG 26 188 188 ARG ARG A . n A 1 27 ARG 27 189 189 ARG ARG A . n A 1 28 ILE 28 190 190 ILE ILE A . n A 1 29 PHE 29 191 191 PHE PHE A . n A 1 30 THR 30 192 192 THR THR A . n A 1 31 ASN 31 193 193 ASN ASN A . n A 1 32 SER 32 194 194 SER SER A . n A 1 33 ARG 33 195 195 ARG ARG A . n A 1 34 GLU 34 196 196 GLU GLU A . n A 1 35 ARG 35 197 197 ARG ARG A . n A 1 36 TRP 36 198 198 TRP TRP A . n A 1 37 ARG 37 199 199 ARG ARG A . n A 1 38 GLN 38 200 200 GLN GLN A . n A 1 39 GLN 39 201 201 GLN GLN A . n A 1 40 ASN 40 202 202 ASN ASN A . n A 1 41 VAL 41 203 203 VAL VAL A . n A 1 42 ASN 42 204 204 ASN ASN A . n A 1 43 GLY 43 205 205 GLY GLY A . n A 1 44 ALA 44 206 206 ALA ALA A . n A 1 45 PHE 45 207 207 PHE PHE A . n A 1 46 ALA 46 208 208 ALA ALA A . n A 1 47 GLU 47 209 209 GLU GLU A . n A 1 48 LEU 48 210 210 LEU LEU A . n A 1 49 ARG 49 211 211 ARG ARG A . n A 1 50 LYS 50 212 212 LYS LYS A . n A 1 51 LEU 51 213 213 LEU LEU A . n A 1 52 ILE 52 214 214 ILE ILE A . n A 1 53 PRO 53 215 215 PRO PRO A . n A 1 54 THR 54 216 216 THR THR A . n A 1 55 HIS 55 217 217 HIS HIS A . n A 1 56 PRO 56 218 218 PRO PRO A . n A 1 57 PRO 57 219 219 PRO PRO A . n A 1 58 ASP 58 220 220 ASP ASP A . n A 1 59 LYS 59 221 221 LYS LYS A . n A 1 60 LYS 60 222 222 LYS LYS A . n A 1 61 LEU 61 223 223 LEU LEU A . n A 1 62 SER 62 224 224 SER SER A . n A 1 63 LYS 63 225 225 LYS LYS A . n A 1 64 ASN 64 226 226 ASN ASN A . n A 1 65 GLU 65 227 227 GLU GLU A . n A 1 66 ILE 66 228 228 ILE ILE A . n A 1 67 LEU 67 229 229 LEU LEU A . n A 1 68 ARG 68 230 230 ARG ARG A . n A 1 69 LEU 69 231 231 LEU LEU A . n A 1 70 ALA 70 232 232 ALA ALA A . n A 1 71 MET 71 233 233 MET MET A . n A 1 72 LYS 72 234 234 LYS LYS A . n A 1 73 TYR 73 235 235 TYR TYR A . n A 1 74 ILE 74 236 236 ILE ILE A . n A 1 75 ASN 75 237 237 ASN ASN A . n A 1 76 PHE 76 238 238 PHE PHE A . n A 1 77 LEU 77 239 239 LEU LEU A . n A 1 78 ALA 78 240 240 ALA ALA A . n A 1 79 LYS 79 241 241 LYS LYS A . n A 1 80 LEU 80 242 242 LEU LEU A . n A 1 81 LEU 81 243 243 LEU LEU A . n A 1 82 ASN 82 244 244 ASN ASN A . n A 1 83 ASP 83 245 245 ASP ASP A . n A 1 84 GLN 84 246 246 GLN GLN A . n A 1 85 GLU 85 247 247 GLU GLU A . n A 1 86 GLU 86 248 248 GLU GLU A . n A 1 87 GLU 87 249 ? ? ? A . n A 1 88 GLY 88 250 ? ? ? A . n A 1 89 THR 89 251 ? ? ? A . n A 1 90 GLN 90 252 ? ? ? A . n A 1 91 ARG 91 253 ? ? ? A . n B 2 1 MET 1 532 ? ? ? B . n B 2 2 ALA 2 533 ? ? ? B . n B 2 3 ASP 3 534 ? ? ? B . n B 2 4 LEU 4 535 ? ? ? B . n B 2 5 SER 5 536 ? ? ? B . n B 2 6 LEU 6 537 ? ? ? B . n B 2 7 GLU 7 538 ? ? ? B . n B 2 8 GLU 8 539 539 GLU GLU B . n B 2 9 LYS 9 540 540 LYS LYS B . n B 2 10 ASP 10 541 541 ASP ASP B . n B 2 11 LEU 11 542 542 LEU LEU B . n B 2 12 ARG 12 543 543 ARG ARG B . n B 2 13 ASP 13 544 544 ASP ASP B . n B 2 14 ARG 14 545 545 ARG ARG B . n B 2 15 GLU 15 546 546 GLU GLU B . n B 2 16 ARG 16 547 547 ARG ARG B . n B 2 17 ARG 17 548 548 ARG ARG B . n B 2 18 MET 18 549 549 MET MET B . n B 2 19 ALA 19 550 550 ALA ALA B . n B 2 20 ASN 20 551 551 ASN ASN B . n B 2 21 ASN 21 552 552 ASN ASN B . n B 2 22 ALA 22 553 553 ALA ALA B . n B 2 23 ARG 23 554 554 ARG ARG B . n B 2 24 GLU 24 555 555 GLU GLU B . n B 2 25 ARG 25 556 556 ARG ARG B . n B 2 26 VAL 26 557 557 VAL VAL B . n B 2 27 ARG 27 558 558 ARG ARG B . n B 2 28 VAL 28 559 559 VAL VAL B . n B 2 29 ARG 29 560 560 ARG ARG B . n B 2 30 ASP 30 561 561 ASP ASP B . n B 2 31 ILE 31 562 562 ILE ILE B . n B 2 32 ASN 32 563 563 ASN ASN B . n B 2 33 GLU 33 564 564 GLU GLU B . n B 2 34 ALA 34 565 565 ALA ALA B . n B 2 35 PHE 35 566 566 PHE PHE B . n B 2 36 ARG 36 567 567 ARG ARG B . n B 2 37 GLU 37 568 568 GLU GLU B . n B 2 38 LEU 38 569 569 LEU LEU B . n B 2 39 GLY 39 570 570 GLY GLY B . n B 2 40 ARG 40 571 571 ARG ARG B . n B 2 41 MET 41 572 572 MET MET B . n B 2 42 CYS 42 573 573 CYS CYS B . n B 2 43 GLN 43 574 574 GLN GLN B . n B 2 44 MET 44 575 575 MET MET B . n B 2 45 HIS 45 576 576 HIS HIS B . n B 2 46 LEU 46 577 577 LEU LEU B . n B 2 47 LYS 47 578 578 LYS LYS B . n B 2 48 SER 48 579 579 SER SER B . n B 2 49 ASP 49 580 580 ASP ASP B . n B 2 50 LYS 50 581 581 LYS LYS B . n B 2 51 ALA 51 582 582 ALA ALA B . n B 2 52 GLN 52 583 583 GLN GLN B . n B 2 53 THR 53 584 584 THR THR B . n B 2 54 LYS 54 585 585 LYS LYS B . n B 2 55 LEU 55 586 586 LEU LEU B . n B 2 56 LEU 56 587 587 LEU LEU B . n B 2 57 ILE 57 588 588 ILE ILE B . n B 2 58 LEU 58 589 589 LEU LEU B . n B 2 59 GLN 59 590 590 GLN GLN B . n B 2 60 GLN 60 591 591 GLN GLN B . n B 2 61 ALA 61 592 592 ALA ALA B . n B 2 62 VAL 62 593 593 VAL VAL B . n B 2 63 GLN 63 594 594 GLN GLN B . n B 2 64 VAL 64 595 595 VAL VAL B . n B 2 65 ILE 65 596 596 ILE ILE B . n B 2 66 LEU 66 597 597 LEU LEU B . n B 2 67 GLY 67 598 598 GLY GLY B . n B 2 68 LEU 68 599 599 LEU LEU B . n B 2 69 GLU 69 600 600 GLU GLU B . n B 2 70 GLN 70 601 601 GLN GLN B . n B 2 71 GLN 71 602 602 GLN GLN B . n B 2 72 VAL 72 603 603 VAL VAL B . n B 2 73 ARG 73 604 604 ARG ARG B . n B 2 74 GLU 74 605 605 GLU GLU B . n B 2 75 ARG 75 606 606 ARG ARG B . n B 2 76 ASN 76 607 607 ASN ASN B . n B 2 77 LEU 77 608 608 LEU LEU B . n B 2 78 ASN 78 609 609 ASN ASN B . n B 2 79 PRO 79 610 610 PRO PRO B . n B 2 80 LYS 80 611 611 LYS LYS B . n B 2 81 ALA 81 612 ? ? ? B . n B 2 82 ALA 82 613 ? ? ? B . n C 3 1 MET 1 12 ? ? ? C . n C 3 2 GLY 2 13 ? ? ? C . n C 3 3 SER 3 14 ? ? ? C . n C 3 4 SER 4 15 ? ? ? C . n C 3 5 HIS 5 16 ? ? ? C . n C 3 6 HIS 6 17 ? ? ? C . n C 3 7 HIS 7 18 ? ? ? C . n C 3 8 HIS 8 19 ? ? ? C . n C 3 9 HIS 9 20 ? ? ? C . n C 3 10 HIS 10 21 ? ? ? C . n C 3 11 SER 11 22 ? ? ? C . n C 3 12 GLN 12 23 ? ? ? C . n C 3 13 ASP 13 24 ? ? ? C . n C 3 14 PRO 14 25 ? ? ? C . n C 3 15 SER 15 26 ? ? ? C . n C 3 16 LEU 16 27 ? ? ? C . n C 3 17 LEU 17 28 ? ? ? C . n C 3 18 THR 18 29 ? ? ? C . n C 3 19 CYS 19 30 30 CYS CYS C . n C 3 20 GLY 20 31 31 GLY GLY C . n C 3 21 GLY 21 32 32 GLY GLY C . n C 3 22 CYS 22 33 33 CYS CYS C . n C 3 23 GLN 23 34 34 GLN GLN C . n C 3 24 GLN 24 35 35 GLN GLN C . n C 3 25 ASN 25 36 36 ASN ASN C . n C 3 26 ILE 26 37 37 ILE ILE C . n C 3 27 GLY 27 38 38 GLY GLY C . n C 3 28 ASP 28 39 39 ASP ASP C . n C 3 29 ARG 29 40 40 ARG ARG C . n C 3 30 TYR 30 41 41 TYR TYR C . n C 3 31 PHE 31 42 42 PHE PHE C . n C 3 32 LEU 32 43 43 LEU LEU C . n C 3 33 LYS 33 44 44 LYS LYS C . n C 3 34 ALA 34 45 45 ALA ALA C . n C 3 35 ILE 35 46 46 ILE ILE C . n C 3 36 ASP 36 47 47 ASP ASP C . n C 3 37 GLN 37 48 48 GLN GLN C . n C 3 38 TYR 38 49 49 TYR TYR C . n C 3 39 TRP 39 50 50 TRP TRP C . n C 3 40 HIS 40 51 51 HIS HIS C . n C 3 41 GLU 41 52 52 GLU GLU C . n C 3 42 ASP 42 53 53 ASP ASP C . n C 3 43 CYS 43 54 54 CYS CYS C . n C 3 44 LEU 44 55 55 LEU LEU C . n C 3 45 SER 45 56 56 SER SER C . n C 3 46 CYS 46 57 57 CYS CYS C . n C 3 47 ASP 47 58 58 ASP ASP C . n C 3 48 LEU 48 59 59 LEU LEU C . n C 3 49 CYS 49 60 60 CYS CYS C . n C 3 50 GLY 50 61 61 GLY GLY C . n C 3 51 CYS 51 62 62 CYS CYS C . n C 3 52 ARG 52 63 63 ARG ARG C . n C 3 53 LEU 53 64 64 LEU LEU C . n C 3 54 GLY 54 65 65 GLY GLY C . n C 3 55 GLU 55 66 66 GLU GLU C . n C 3 56 VAL 56 67 67 VAL VAL C . n C 3 57 GLY 57 68 68 GLY GLY C . n C 3 58 ARG 58 69 69 ARG ARG C . n C 3 59 ARG 59 70 70 ARG ARG C . n C 3 60 LEU 60 71 71 LEU LEU C . n C 3 61 TYR 61 72 72 TYR TYR C . n C 3 62 TYR 62 73 73 TYR TYR C . n C 3 63 LYS 63 74 74 LYS LYS C . n C 3 64 LEU 64 75 75 LEU LEU C . n C 3 65 GLY 65 76 76 GLY GLY C . n C 3 66 ARG 66 77 77 ARG ARG C . n C 3 67 LYS 67 78 78 LYS LYS C . n C 3 68 LEU 68 79 79 LEU LEU C . n C 3 69 CYS 69 80 80 CYS CYS C . n C 3 70 ARG 70 81 81 ARG ARG C . n C 3 71 ARG 71 82 82 ARG ARG C . n C 3 72 ASP 72 83 83 ASP ASP C . n C 3 73 TYR 73 84 84 TYR TYR C . n C 3 74 LEU 74 85 85 LEU LEU C . n C 3 75 ARG 75 86 86 ARG ARG C . n C 3 76 LEU 76 87 87 LEU LEU C . n C 3 77 PHE 77 88 88 PHE PHE C . n C 3 78 GLY 78 89 89 GLY GLY C . n C 3 79 GLN 79 90 90 GLN GLN C . n C 3 80 ASP 80 91 91 ASP ASP C . n C 3 81 GLY 81 92 92 GLY GLY C . n C 3 82 LEU 82 93 93 LEU LEU C . n C 3 83 CYS 83 94 94 CYS CYS C . n C 3 84 ALA 84 95 95 ALA ALA C . n C 3 85 SER 85 96 96 SER SER C . n C 3 86 CYS 86 97 97 CYS CYS C . n C 3 87 ASP 87 98 98 ASP ASP C . n C 3 88 LYS 88 99 99 LYS LYS C . n C 3 89 ARG 89 100 100 ARG ARG C . n C 3 90 ILE 90 101 101 ILE ILE C . n C 3 91 ARG 91 102 102 ARG ARG C . n C 3 92 ALA 92 103 103 ALA ALA C . n C 3 93 TYR 93 104 104 TYR TYR C . n C 3 94 GLU 94 105 105 GLU GLU C . n C 3 95 MET 95 106 106 MET MET C . n C 3 96 THR 96 107 107 THR THR C . n C 3 97 MET 97 108 108 MET MET C . n C 3 98 ARG 98 109 109 ARG ARG C . n C 3 99 VAL 99 110 110 VAL VAL C . n C 3 100 LYS 100 111 111 LYS LYS C . n C 3 101 ASP 101 112 112 ASP ASP C . n C 3 102 LYS 102 113 113 LYS LYS C . n C 3 103 VAL 103 114 114 VAL VAL C . n C 3 104 TYR 104 115 115 TYR TYR C . n C 3 105 HIS 105 116 116 HIS HIS C . n C 3 106 LEU 106 117 117 LEU LEU C . n C 3 107 GLU 107 118 118 GLU GLU C . n C 3 108 CYS 108 119 119 CYS CYS C . n C 3 109 PHE 109 120 120 PHE PHE C . n C 3 110 LYS 110 121 121 LYS LYS C . n C 3 111 CYS 111 122 122 CYS CYS C . n C 3 112 ALA 112 123 123 ALA ALA C . n C 3 113 ALA 113 124 124 ALA ALA C . n C 3 114 CYS 114 125 125 CYS CYS C . n C 3 115 GLN 115 126 126 GLN GLN C . n C 3 116 LYS 116 127 127 LYS LYS C . n C 3 117 HIS 117 128 128 HIS HIS C . n C 3 118 PHE 118 129 129 PHE PHE C . n C 3 119 CYS 119 130 130 CYS CYS C . n C 3 120 VAL 120 131 131 VAL VAL C . n C 3 121 GLY 121 132 132 GLY GLY C . n C 3 122 ASP 122 133 133 ASP ASP C . n C 3 123 ARG 123 134 134 ARG ARG C . n C 3 124 TYR 124 135 135 TYR TYR C . n C 3 125 LEU 125 136 136 LEU LEU C . n C 3 126 LEU 126 137 137 LEU LEU C . n C 3 127 ILE 127 138 138 ILE ILE C . n C 3 128 ASN 128 139 139 ASN ASN C . n C 3 129 SER 129 140 140 SER SER C . n C 3 130 ASP 130 141 141 ASP ASP C . n C 3 131 ILE 131 142 142 ILE ILE C . n C 3 132 VAL 132 143 143 VAL VAL C . n C 3 133 CYS 133 144 144 CYS CYS C . n C 3 134 GLU 134 145 145 GLU GLU C . n C 3 135 GLN 135 146 146 GLN GLN C . n C 3 136 ASP 136 147 147 ASP ASP C . n C 3 137 ILE 137 148 148 ILE ILE C . n C 3 138 TYR 138 149 149 TYR TYR C . n C 3 139 GLU 139 150 150 GLU GLU C . n C 3 140 TRP 140 151 151 TRP TRP C . n C 3 141 THR 141 152 152 THR THR C . n C 3 142 LYS 142 153 153 LYS LYS C . n C 3 143 ILE 143 154 154 ILE ILE C . n C 3 144 ASN 144 155 155 ASN ASN C . n C 3 145 GLY 145 156 ? ? ? C . n D 4 1 GLY 1 289 ? ? ? D . n D 4 2 GLY 2 290 ? ? ? D . n D 4 3 SER 3 291 ? ? ? D . n D 4 4 GLY 4 292 ? ? ? D . n D 4 5 GLY 5 293 ? ? ? D . n D 4 6 HIS 6 294 ? ? ? D . n D 4 7 MET 7 295 ? ? ? D . n D 4 8 GLY 8 296 ? ? ? D . n D 4 9 SER 9 297 ? ? ? D . n D 4 10 GLY 10 298 ? ? ? D . n D 4 11 GLY 11 299 ? ? ? D . n D 4 12 ASP 12 300 300 ASP ASP D . n D 4 13 VAL 13 301 301 VAL VAL D . n D 4 14 MET 14 302 302 MET MET D . n D 4 15 VAL 15 303 303 VAL VAL D . n D 4 16 VAL 16 304 304 VAL VAL D . n D 4 17 GLY 17 305 305 GLY GLY D . n D 4 18 GLU 18 306 306 GLU GLU D . n D 4 19 PRO 19 307 307 PRO PRO D . n D 4 20 THR 20 308 308 THR THR D . n D 4 21 LEU 21 309 309 LEU LEU D . n D 4 22 MET 22 310 310 MET MET D . n D 4 23 GLY 23 311 311 GLY GLY D . n D 4 24 GLY 24 312 312 GLY GLY D . n D 4 25 GLU 25 313 313 GLU GLU D . n D 4 26 PHE 26 314 314 PHE PHE D . n D 4 27 GLY 27 315 315 GLY GLY D . n D 4 28 ASP 28 316 316 ASP ASP D . n D 4 29 GLU 29 317 317 GLU GLU D . n D 4 30 ASP 30 318 318 ASP ASP D . n D 4 31 GLU 31 319 319 GLU GLU D . n D 4 32 ARG 32 320 320 ARG ARG D . n D 4 33 LEU 33 321 321 LEU LEU D . n D 4 34 ILE 34 322 322 ILE ILE D . n D 4 35 THR 35 323 323 THR THR D . n D 4 36 ARG 36 324 324 ARG ARG D . n D 4 37 LEU 37 325 325 LEU LEU D . n D 4 38 GLU 38 326 326 GLU GLU D . n D 4 39 ASN 39 327 327 ASN ASN D . n D 4 40 THR 40 328 328 THR THR D . n D 4 41 GLN 41 329 329 GLN GLN D . n D 4 42 PHE 42 330 ? ? ? D . n D 4 43 ASP 43 331 ? ? ? D . n D 4 44 ALA 44 332 ? ? ? D . n D 4 45 ALA 45 333 ? ? ? D . n D 4 46 ASN 46 334 ? ? ? D . n D 4 47 GLY 47 335 ? ? ? D . n D 4 48 ILE 48 336 ? ? ? D . n D 4 49 ASP 49 337 ? ? ? D . n D 4 50 ASP 50 338 ? ? ? D . n D 4 51 GLU 51 339 ? ? ? D . n E 5 1 DA 1 4 4 DA DA E . n E 5 2 DC 2 5 5 DC DC E . n E 5 3 DC 3 6 6 DC DC E . n E 5 4 DA 4 7 7 DA DA E . n E 5 5 DT 5 8 8 DT DT E . n E 5 6 DC 6 9 9 DC DC E . n E 5 7 DT 7 10 10 DT DT E . n E 5 8 DG 8 11 11 DG DG E . n E 5 9 DT 9 12 12 DT DT E . n E 5 10 DT 10 13 13 DT DT E . n E 5 11 DC 11 14 14 DC DC E . n F 6 1 DG 1 22 22 DG DG F . n F 6 2 DA 2 23 23 DA DA F . n F 6 3 DA 3 24 24 DA DA F . n F 6 4 DC 4 25 25 DC DC F . n F 6 5 DA 5 26 26 DA DA F . n F 6 6 DG 6 27 27 DG DG F . n F 6 7 DA 7 28 28 DA DA F . n F 6 8 DT 8 29 29 DT DT F . n F 6 9 DG 9 30 30 DG DG F . n F 6 10 DG 10 31 31 DG DG F . n F 6 11 DT 11 32 32 DT DT F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 ZN 1 1156 1156 ZN ZN C . H 7 ZN 1 1157 1157 ZN ZN C . I 7 ZN 1 1158 1158 ZN ZN C . J 7 ZN 1 1159 1159 ZN ZN C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8910 ? 1 MORE -64.0 ? 1 'SSA (A^2)' 26330 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? C ASP 72 ? C ASP 83 ? 1_555 ZN ? I ZN . ? C ZN 1158 ? 1_555 SG ? C CYS 69 ? C CYS 80 ? 1_555 89.6 ? 2 OD2 ? C ASP 72 ? C ASP 83 ? 1_555 ZN ? I ZN . ? C ZN 1158 ? 1_555 SG ? C CYS 46 ? C CYS 57 ? 1_555 102.8 ? 3 SG ? C CYS 69 ? C CYS 80 ? 1_555 ZN ? I ZN . ? C ZN 1158 ? 1_555 SG ? C CYS 46 ? C CYS 57 ? 1_555 107.2 ? 4 OD2 ? C ASP 72 ? C ASP 83 ? 1_555 ZN ? I ZN . ? C ZN 1158 ? 1_555 SG ? C CYS 49 ? C CYS 60 ? 1_555 110.9 ? 5 SG ? C CYS 69 ? C CYS 80 ? 1_555 ZN ? I ZN . ? C ZN 1158 ? 1_555 SG ? C CYS 49 ? C CYS 60 ? 1_555 114.0 ? 6 SG ? C CYS 46 ? C CYS 57 ? 1_555 ZN ? I ZN . ? C ZN 1158 ? 1_555 SG ? C CYS 49 ? C CYS 60 ? 1_555 125.8 ? 7 OD2 ? C ASP 136 ? C ASP 147 ? 1_555 ZN ? G ZN . ? C ZN 1156 ? 1_555 SG ? C CYS 111 ? C CYS 122 ? 1_555 121.9 ? 8 OD2 ? C ASP 136 ? C ASP 147 ? 1_555 ZN ? G ZN . ? C ZN 1156 ? 1_555 SG ? C CYS 133 ? C CYS 144 ? 1_555 95.1 ? 9 SG ? C CYS 111 ? C CYS 122 ? 1_555 ZN ? G ZN . ? C ZN 1156 ? 1_555 SG ? C CYS 133 ? C CYS 144 ? 1_555 111.4 ? 10 OD2 ? C ASP 136 ? C ASP 147 ? 1_555 ZN ? G ZN . ? C ZN 1156 ? 1_555 SG ? C CYS 114 ? C CYS 125 ? 1_555 94.9 ? 11 SG ? C CYS 111 ? C CYS 122 ? 1_555 ZN ? G ZN . ? C ZN 1156 ? 1_555 SG ? C CYS 114 ? C CYS 125 ? 1_555 109.3 ? 12 SG ? C CYS 133 ? C CYS 144 ? 1_555 ZN ? G ZN . ? C ZN 1156 ? 1_555 SG ? C CYS 114 ? C CYS 125 ? 1_555 123.6 ? 13 SG ? C CYS 86 ? C CYS 97 ? 1_555 ZN ? H ZN . ? C ZN 1157 ? 1_555 ND1 ? C HIS 105 ? C HIS 116 ? 1_555 113.7 ? 14 SG ? C CYS 86 ? C CYS 97 ? 1_555 ZN ? H ZN . ? C ZN 1157 ? 1_555 SG ? C CYS 108 ? C CYS 119 ? 1_555 133.7 ? 15 ND1 ? C HIS 105 ? C HIS 116 ? 1_555 ZN ? H ZN . ? C ZN 1157 ? 1_555 SG ? C CYS 108 ? C CYS 119 ? 1_555 90.5 ? 16 SG ? C CYS 86 ? C CYS 97 ? 1_555 ZN ? H ZN . ? C ZN 1157 ? 1_555 SG ? C CYS 83 ? C CYS 94 ? 1_555 120.0 ? 17 ND1 ? C HIS 105 ? C HIS 116 ? 1_555 ZN ? H ZN . ? C ZN 1157 ? 1_555 SG ? C CYS 83 ? C CYS 94 ? 1_555 80.0 ? 18 SG ? C CYS 108 ? C CYS 119 ? 1_555 ZN ? H ZN . ? C ZN 1157 ? 1_555 SG ? C CYS 83 ? C CYS 94 ? 1_555 102.1 ? 19 SG ? C CYS 19 ? C CYS 30 ? 1_555 ZN ? J ZN . ? C ZN 1159 ? 1_555 SG ? C CYS 22 ? C CYS 33 ? 1_555 131.6 ? 20 SG ? C CYS 19 ? C CYS 30 ? 1_555 ZN ? J ZN . ? C ZN 1159 ? 1_555 SG ? C CYS 43 ? C CYS 54 ? 1_555 123.0 ? 21 SG ? C CYS 22 ? C CYS 33 ? 1_555 ZN ? J ZN . ? C ZN 1159 ? 1_555 SG ? C CYS 43 ? C CYS 54 ? 1_555 98.0 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2013-07-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 35.1864 15.3649 13.1801 0.0438 0.2097 0.3822 -0.0271 0.0648 -0.0199 3.2765 0.0457 1.3610 0.3802 0.3116 -0.0006 -0.0328 -0.3508 0.0181 0.0033 -0.0375 0.0137 -0.1858 -0.0219 0.0703 'X-RAY DIFFRACTION' 2 ? refined 37.3182 17.3637 5.8655 0.0606 0.2048 0.4141 -0.0141 0.0745 0.0388 1.2713 0.1881 1.0939 -0.1945 0.1397 0.3877 0.1486 -0.0594 0.1251 -0.1038 0.0317 -0.0919 -0.1902 0.1255 -0.1804 'X-RAY DIFFRACTION' 3 ? refined 51.7775 19.9547 31.5103 0.1473 0.3599 0.2679 -0.0776 0.0542 -0.0388 0.6505 1.7736 2.8913 0.6937 -1.2499 -1.9795 0.0074 -0.0184 0.1562 0.2655 0.2453 0.1172 -0.2456 0.0233 -0.2527 'X-RAY DIFFRACTION' 4 ? refined 60.3472 26.0602 33.0081 0.6974 0.4720 0.2083 -0.4199 -0.1855 0.0227 1.6513 1.1227 3.7376 1.1926 -2.2216 -2.0447 0.0320 -0.3883 -0.2323 0.4651 -0.5459 -0.2824 -0.7882 0.8993 0.5139 'X-RAY DIFFRACTION' 5 ? refined 20.6762 16.8909 6.0424 0.1231 0.3069 0.2713 0.1144 0.0861 -0.0244 4.4457 1.8405 2.5500 0.2707 0.2645 0.0666 0.4783 -0.1531 0.3089 -0.1817 -0.4400 0.0344 -0.2856 -0.7298 -0.0383 'X-RAY DIFFRACTION' 6 ? refined 20.5696 17.7125 6.6635 0.0795 0.1803 0.3163 -0.0012 0.0507 -0.0266 3.0404 4.8093 2.5721 -2.1698 -0.3466 1.9817 0.2507 0.1146 0.4348 0.0650 -0.4463 -0.2314 -0.0609 -0.0086 0.1956 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 182 ? ? A 248 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 539 ? ? B 612 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 30 ? ? C 155 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 300 ? ? D 329 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 E 4 ? ? E 14 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 F 22 ? ? F 32 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0029 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHENIX phasing AUTOSOL ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 246 ? ? -78.46 25.31 2 1 ILE C 37 ? ? -72.10 -81.67 3 1 HIS C 51 ? ? -46.19 158.23 4 1 VAL C 110 ? ? -164.30 117.60 5 1 LYS C 111 ? ? 53.38 -133.74 6 1 ALA C 124 ? ? -98.88 -78.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 163 ? A MET 1 2 1 Y 1 A GLY 164 ? A GLY 2 3 1 Y 1 A SER 165 ? A SER 3 4 1 Y 1 A SER 166 ? A SER 4 5 1 Y 1 A HIS 167 ? A HIS 5 6 1 Y 1 A HIS 168 ? A HIS 6 7 1 Y 1 A HIS 169 ? A HIS 7 8 1 Y 1 A HIS 170 ? A HIS 8 9 1 Y 1 A HIS 171 ? A HIS 9 10 1 Y 1 A HIS 172 ? A HIS 10 11 1 Y 1 A SER 173 ? A SER 11 12 1 Y 1 A GLN 174 ? A GLN 12 13 1 Y 1 A ASP 175 ? A ASP 13 14 1 Y 1 A PRO 176 ? A PRO 14 15 1 Y 1 A GLU 177 ? A GLU 15 16 1 Y 1 A ILE 178 ? A ILE 16 17 1 Y 1 A SER 179 ? A SER 17 18 1 Y 1 A ASP 180 ? A ASP 18 19 1 Y 1 A GLY 181 ? A GLY 19 20 1 Y 1 A GLU 249 ? A GLU 87 21 1 Y 1 A GLY 250 ? A GLY 88 22 1 Y 1 A THR 251 ? A THR 89 23 1 Y 1 A GLN 252 ? A GLN 90 24 1 Y 1 A ARG 253 ? A ARG 91 25 1 Y 1 B MET 532 ? B MET 1 26 1 Y 1 B ALA 533 ? B ALA 2 27 1 Y 1 B ASP 534 ? B ASP 3 28 1 Y 1 B LEU 535 ? B LEU 4 29 1 Y 1 B SER 536 ? B SER 5 30 1 Y 1 B LEU 537 ? B LEU 6 31 1 Y 1 B GLU 538 ? B GLU 7 32 1 Y 1 B ALA 612 ? B ALA 81 33 1 Y 1 B ALA 613 ? B ALA 82 34 1 Y 1 C MET 12 ? C MET 1 35 1 Y 1 C GLY 13 ? C GLY 2 36 1 Y 1 C SER 14 ? C SER 3 37 1 Y 1 C SER 15 ? C SER 4 38 1 Y 1 C HIS 16 ? C HIS 5 39 1 Y 1 C HIS 17 ? C HIS 6 40 1 Y 1 C HIS 18 ? C HIS 7 41 1 Y 1 C HIS 19 ? C HIS 8 42 1 Y 1 C HIS 20 ? C HIS 9 43 1 Y 1 C HIS 21 ? C HIS 10 44 1 Y 1 C SER 22 ? C SER 11 45 1 Y 1 C GLN 23 ? C GLN 12 46 1 Y 1 C ASP 24 ? C ASP 13 47 1 Y 1 C PRO 25 ? C PRO 14 48 1 Y 1 C SER 26 ? C SER 15 49 1 Y 1 C LEU 27 ? C LEU 16 50 1 Y 1 C LEU 28 ? C LEU 17 51 1 Y 1 C THR 29 ? C THR 18 52 1 Y 1 C GLY 156 ? C GLY 145 53 1 Y 1 D GLY 289 ? D GLY 1 54 1 Y 1 D GLY 290 ? D GLY 2 55 1 Y 1 D SER 291 ? D SER 3 56 1 Y 1 D GLY 292 ? D GLY 4 57 1 Y 1 D GLY 293 ? D GLY 5 58 1 Y 1 D HIS 294 ? D HIS 6 59 1 Y 1 D MET 295 ? D MET 7 60 1 Y 1 D GLY 296 ? D GLY 8 61 1 Y 1 D SER 297 ? D SER 9 62 1 Y 1 D GLY 298 ? D GLY 10 63 1 Y 1 D GLY 299 ? D GLY 11 64 1 Y 1 D PHE 330 ? D PHE 42 65 1 Y 1 D ASP 331 ? D ASP 43 66 1 Y 1 D ALA 332 ? D ALA 44 67 1 Y 1 D ALA 333 ? D ALA 45 68 1 Y 1 D ASN 334 ? D ASN 46 69 1 Y 1 D GLY 335 ? D GLY 47 70 1 Y 1 D ILE 336 ? D ILE 48 71 1 Y 1 D ASP 337 ? D ASP 49 72 1 Y 1 D ASP 338 ? D ASP 50 73 1 Y 1 D GLU 339 ? D GLU 51 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2YPA 'double helix' 2YPA 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 E DA 1 1_555 F DT 11 1_555 -0.760 -0.019 0.416 -7.143 0.726 7.766 1 E_DA4:DT32_F E 4 ? F 32 ? 20 1 1 E DC 2 1_555 F DG 10 1_555 -0.433 0.150 0.102 2.987 -3.357 1.687 2 E_DC5:DG31_F E 5 ? F 31 ? 19 1 1 E DC 3 1_555 F DG 9 1_555 -0.192 0.110 0.202 -8.474 -6.628 0.758 3 E_DC6:DG30_F E 6 ? F 30 ? 19 1 1 E DA 4 1_555 F DT 8 1_555 0.074 -0.013 -0.067 0.827 -9.486 -2.541 4 E_DA7:DT29_F E 7 ? F 29 ? 20 1 1 E DT 5 1_555 F DA 7 1_555 -0.179 -0.043 0.058 -1.648 -13.827 1.620 5 E_DT8:DA28_F E 8 ? F 28 ? 20 1 1 E DC 6 1_555 F DG 6 1_555 -0.138 -0.067 0.414 -6.420 -11.778 -1.076 6 E_DC9:DG27_F E 9 ? F 27 ? 19 1 1 E DT 7 1_555 F DA 5 1_555 0.015 -0.053 0.506 -10.853 -12.512 2.691 7 E_DT10:DA26_F E 10 ? F 26 ? 20 1 1 E DG 8 1_555 F DC 4 1_555 0.016 -0.051 -0.308 -3.597 -5.284 0.367 8 E_DG11:DC25_F E 11 ? F 25 ? 19 1 1 E DT 9 1_555 F DA 3 1_555 0.244 -0.044 0.267 -6.178 -10.026 -3.491 9 E_DT12:DA24_F E 12 ? F 24 ? 20 1 1 E DT 10 1_555 F DA 2 1_555 0.183 -0.088 -0.257 3.115 -16.704 2.342 10 E_DT13:DA23_F E 13 ? F 23 ? 20 1 1 E DC 11 1_555 F DG 1 1_555 -0.276 -0.102 -0.404 5.399 -3.533 -2.807 11 E_DC14:DG22_F E 14 ? F 22 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 E DA 1 1_555 F DT 11 1_555 E DC 2 1_555 F DG 10 1_555 0.240 -0.632 3.262 0.763 3.631 35.075 -1.576 -0.285 3.187 6.004 -1.261 35.264 1 EE_DA4DC5:DG31DT32_FF E 4 ? F 32 ? E 5 ? F 31 ? 1 E DC 2 1_555 F DG 10 1_555 E DC 3 1_555 F DG 9 1_555 0.588 -0.835 3.443 3.380 4.683 32.752 -2.277 -0.437 3.338 8.225 -5.937 33.244 2 EE_DC5DC6:DG30DG31_FF E 5 ? F 31 ? E 6 ? F 30 ? 1 E DC 3 1_555 F DG 9 1_555 E DA 4 1_555 F DT 8 1_555 -0.207 0.508 3.190 3.417 3.391 39.494 0.361 0.692 3.193 4.996 -5.034 39.774 3 EE_DC6DA7:DT29DG30_FF E 6 ? F 30 ? E 7 ? F 29 ? 1 E DA 4 1_555 F DT 8 1_555 E DT 5 1_555 F DA 7 1_555 0.067 -0.660 3.425 -1.539 7.659 27.659 -3.088 -0.488 3.125 15.629 3.141 28.720 4 EE_DA7DT8:DA28DT29_FF E 7 ? F 29 ? E 8 ? F 28 ? 1 E DT 5 1_555 F DA 7 1_555 E DC 6 1_555 F DG 6 1_555 -0.378 -0.216 3.433 -2.140 4.560 35.034 -1.059 0.291 3.396 7.526 3.533 35.383 5 EE_DT8DC9:DG27DA28_FF E 8 ? F 28 ? E 9 ? F 27 ? 1 E DC 6 1_555 F DG 6 1_555 E DT 7 1_555 F DA 5 1_555 0.924 -0.508 3.370 2.118 2.987 34.973 -1.301 -1.203 3.365 4.954 -3.512 35.159 6 EE_DC9DT10:DA26DG27_FF E 9 ? F 27 ? E 10 ? F 26 ? 1 E DT 7 1_555 F DA 5 1_555 E DG 8 1_555 F DC 4 1_555 -0.369 0.947 3.232 1.983 10.702 36.552 0.056 0.824 3.345 16.616 -3.078 38.084 7 EE_DT10DG11:DC25DA26_FF E 10 ? F 26 ? E 11 ? F 25 ? 1 E DG 8 1_555 F DC 4 1_555 E DT 9 1_555 F DA 3 1_555 -0.765 -0.690 3.470 -5.875 0.021 31.033 -1.273 0.225 3.551 0.038 10.857 31.571 8 EE_DG11DT12:DA24DC25_FF E 11 ? F 25 ? E 12 ? F 24 ? 1 E DT 9 1_555 F DA 3 1_555 E DT 10 1_555 F DA 2 1_555 0.247 -0.332 2.992 4.651 -0.113 31.733 -0.582 0.323 2.998 -0.206 -8.448 32.064 9 EE_DT12DT13:DA23DA24_FF E 12 ? F 24 ? E 13 ? F 23 ? 1 E DT 10 1_555 F DA 2 1_555 E DC 11 1_555 F DG 1 1_555 0.476 0.165 3.306 1.915 5.097 30.809 -0.677 -0.513 3.313 9.500 -3.570 31.275 10 EE_DT13DC14:DG22DA23_FF E 13 ? F 23 ? E 14 ? F 22 ? # _pdbx_entity_nonpoly.entity_id 7 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #