data_2YV5 # _entry.id 2YV5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YV5 pdb_00002yv5 10.2210/pdb2yv5/pdb RCSB RCSB027173 ? ? WWPDB D_1000027173 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ar_001000327.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YV5 _pdbx_database_status.recvd_initial_deposition_date 2007-04-09 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, H.' 1 'Kaminishi, T.' 2 'Hanawa-Suetsugu, K.' 3 'Takemoto, C.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Crystal structure of YjeQ from Aquifex aeolicus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, H.' 1 ? primary 'Kaminishi, T.' 2 ? primary 'Hanawa-Suetsugu, K.' 3 ? primary 'Takemoto, C.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _cell.entry_id 2YV5 _cell.length_a 63.139 _cell.length_b 63.139 _cell.length_c 157.319 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2YV5 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'YjeQ protein' 34796.094 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 5 water nat water 18.015 218 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGKKELKRGLVVDREAQMIGVYLFEDGKTYRGIPRGKVLKKTKIYAGDYVWGEVVDPNTFAIEEVEERKNLLIRPKVANV DRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELV DYLEGFICILAGPSGVGKSSILSRLTGEELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGFSKVEATMFVKPREV RNYFREFLRYQCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELCRED ; _entity_poly.pdbx_seq_one_letter_code_can ;MGKKELKRGLVVDREAQMIGVYLFEDGKTYRGIPRGKVLKKTKIYAGDYVWGEVVDPNTFAIEEVEERKNLLIRPKVANV DRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELV DYLEGFICILAGPSGVGKSSILSRLTGEELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGFSKVEATMFVKPREV RNYFREFLRYQCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELCRED ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ar_001000327.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 LYS n 1 4 LYS n 1 5 GLU n 1 6 LEU n 1 7 LYS n 1 8 ARG n 1 9 GLY n 1 10 LEU n 1 11 VAL n 1 12 VAL n 1 13 ASP n 1 14 ARG n 1 15 GLU n 1 16 ALA n 1 17 GLN n 1 18 MET n 1 19 ILE n 1 20 GLY n 1 21 VAL n 1 22 TYR n 1 23 LEU n 1 24 PHE n 1 25 GLU n 1 26 ASP n 1 27 GLY n 1 28 LYS n 1 29 THR n 1 30 TYR n 1 31 ARG n 1 32 GLY n 1 33 ILE n 1 34 PRO n 1 35 ARG n 1 36 GLY n 1 37 LYS n 1 38 VAL n 1 39 LEU n 1 40 LYS n 1 41 LYS n 1 42 THR n 1 43 LYS n 1 44 ILE n 1 45 TYR n 1 46 ALA n 1 47 GLY n 1 48 ASP n 1 49 TYR n 1 50 VAL n 1 51 TRP n 1 52 GLY n 1 53 GLU n 1 54 VAL n 1 55 VAL n 1 56 ASP n 1 57 PRO n 1 58 ASN n 1 59 THR n 1 60 PHE n 1 61 ALA n 1 62 ILE n 1 63 GLU n 1 64 GLU n 1 65 VAL n 1 66 GLU n 1 67 GLU n 1 68 ARG n 1 69 LYS n 1 70 ASN n 1 71 LEU n 1 72 LEU n 1 73 ILE n 1 74 ARG n 1 75 PRO n 1 76 LYS n 1 77 VAL n 1 78 ALA n 1 79 ASN n 1 80 VAL n 1 81 ASP n 1 82 ARG n 1 83 VAL n 1 84 ILE n 1 85 ILE n 1 86 VAL n 1 87 GLU n 1 88 THR n 1 89 LEU n 1 90 LYS n 1 91 MET n 1 92 PRO n 1 93 GLU n 1 94 PHE n 1 95 ASN n 1 96 ASN n 1 97 TYR n 1 98 LEU n 1 99 LEU n 1 100 ASP n 1 101 ASN n 1 102 MET n 1 103 LEU n 1 104 VAL n 1 105 VAL n 1 106 TYR n 1 107 GLU n 1 108 TYR n 1 109 PHE n 1 110 LYS n 1 111 VAL n 1 112 GLU n 1 113 PRO n 1 114 VAL n 1 115 ILE n 1 116 VAL n 1 117 PHE n 1 118 ASN n 1 119 LYS n 1 120 ILE n 1 121 ASP n 1 122 LEU n 1 123 LEU n 1 124 ASN n 1 125 GLU n 1 126 GLU n 1 127 GLU n 1 128 LYS n 1 129 LYS n 1 130 GLU n 1 131 LEU n 1 132 GLU n 1 133 ARG n 1 134 TRP n 1 135 ILE n 1 136 SER n 1 137 ILE n 1 138 TYR n 1 139 ARG n 1 140 ASP n 1 141 ALA n 1 142 GLY n 1 143 TYR n 1 144 ASP n 1 145 VAL n 1 146 LEU n 1 147 LYS n 1 148 VAL n 1 149 SER n 1 150 ALA n 1 151 LYS n 1 152 THR n 1 153 GLY n 1 154 GLU n 1 155 GLY n 1 156 ILE n 1 157 ASP n 1 158 GLU n 1 159 LEU n 1 160 VAL n 1 161 ASP n 1 162 TYR n 1 163 LEU n 1 164 GLU n 1 165 GLY n 1 166 PHE n 1 167 ILE n 1 168 CYS n 1 169 ILE n 1 170 LEU n 1 171 ALA n 1 172 GLY n 1 173 PRO n 1 174 SER n 1 175 GLY n 1 176 VAL n 1 177 GLY n 1 178 LYS n 1 179 SER n 1 180 SER n 1 181 ILE n 1 182 LEU n 1 183 SER n 1 184 ARG n 1 185 LEU n 1 186 THR n 1 187 GLY n 1 188 GLU n 1 189 GLU n 1 190 LEU n 1 191 ARG n 1 192 THR n 1 193 GLN n 1 194 GLU n 1 195 VAL n 1 196 SER n 1 197 GLU n 1 198 LYS n 1 199 THR n 1 200 GLU n 1 201 ARG n 1 202 GLY n 1 203 ARG n 1 204 HIS n 1 205 THR n 1 206 THR n 1 207 THR n 1 208 GLY n 1 209 VAL n 1 210 ARG n 1 211 LEU n 1 212 ILE n 1 213 PRO n 1 214 PHE n 1 215 GLY n 1 216 LYS n 1 217 GLY n 1 218 SER n 1 219 PHE n 1 220 VAL n 1 221 GLY n 1 222 ASP n 1 223 THR n 1 224 PRO n 1 225 GLY n 1 226 PHE n 1 227 SER n 1 228 LYS n 1 229 VAL n 1 230 GLU n 1 231 ALA n 1 232 THR n 1 233 MET n 1 234 PHE n 1 235 VAL n 1 236 LYS n 1 237 PRO n 1 238 ARG n 1 239 GLU n 1 240 VAL n 1 241 ARG n 1 242 ASN n 1 243 TYR n 1 244 PHE n 1 245 ARG n 1 246 GLU n 1 247 PHE n 1 248 LEU n 1 249 ARG n 1 250 TYR n 1 251 GLN n 1 252 CYS n 1 253 LYS n 1 254 TYR n 1 255 PRO n 1 256 ASP n 1 257 CYS n 1 258 THR n 1 259 HIS n 1 260 THR n 1 261 ASN n 1 262 GLU n 1 263 PRO n 1 264 GLY n 1 265 CYS n 1 266 ALA n 1 267 VAL n 1 268 LYS n 1 269 GLU n 1 270 ALA n 1 271 VAL n 1 272 LYS n 1 273 ASN n 1 274 GLY n 1 275 GLU n 1 276 ILE n 1 277 SER n 1 278 CYS n 1 279 GLU n 1 280 ARG n 1 281 TYR n 1 282 LYS n 1 283 SER n 1 284 TYR n 1 285 LEU n 1 286 LYS n 1 287 ILE n 1 288 ILE n 1 289 LYS n 1 290 VAL n 1 291 TYR n 1 292 LEU n 1 293 GLU n 1 294 GLU n 1 295 ILE n 1 296 LYS n 1 297 GLU n 1 298 LEU n 1 299 CYS n 1 300 ARG n 1 301 GLU n 1 302 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aquifex _entity_src_gen.pdbx_gene_src_gene YjeQ _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aquifex aeolicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 63363 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET25b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4PIH2_AQUAE _struct_ref.pdbx_db_accession A4PIH2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGKKELKRGLVVDREAQMIGVYLFEDGKTYRGIPRGKVLKKTKIYAGDYVWGEVVDPNTFAIEEVEERKNLLIRPKVANV DRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELV DYLEGFICILAGPSGVGKSSILSRLTGEELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGFSKVEATMFVKPREV RNYFREFLRYQCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELCRED ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YV5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 302 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A4PIH2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 302 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 302 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2YV5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pdbx_details 'PEG 3350, Ammonium nitratre, pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-02-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 2YV5 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.9 _reflns.number_obs 25896 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.084 _reflns.pdbx_netI_over_sigmaI 34.2 _reflns.B_iso_Wilson_estimate 14.1 _reflns.pdbx_redundancy 18.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.249 _reflns_shell.meanI_over_sigI_obs 12.5 _reflns_shell.pdbx_redundancy 18.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2532 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2YV5 _refine.ls_number_reflns_obs 25585 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 540315.75 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.95 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 98.4 _refine.ls_R_factor_obs 0.176 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.176 _refine.ls_R_factor_R_free 0.207 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 1234 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 26.8 _refine.aniso_B[1][1] -0.98 _refine.aniso_B[2][2] -0.98 _refine.aniso_B[3][3] 1.96 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.389417 _refine.solvent_model_param_bsol 41.1979 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1U0L _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2YV5 _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs -0.08 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.22 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2367 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 218 _refine_hist.number_atoms_total 2615 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 42.95 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.97 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work 3916 _refine_ls_shell.R_factor_R_work 0.155 _refine_ls_shell.percent_reflns_obs 97.7 _refine_ls_shell.R_factor_R_free 0.206 _refine_ls_shell.R_factor_R_free_error 0.014 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 210 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param gdp_cns_top 'X-RAY DIFFRACTION' 3 gdp_cns_param ion.top 'X-RAY DIFFRACTION' 4 ion.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2YV5 _struct.title 'Crystal structure of Yjeq from Aquifex aeolicus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YV5 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;HYDROLASE, GTPASE, PERMUTATION, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 95 ? PHE A 109 ? ASN A 95 PHE A 109 1 ? 15 HELX_P HELX_P2 2 LYS A 119 ? LEU A 123 ? LYS A 119 LEU A 123 5 ? 5 HELX_P HELX_P3 3 ASN A 124 ? ALA A 141 ? ASN A 124 ALA A 141 1 ? 18 HELX_P HELX_P4 4 GLY A 155 ? LEU A 163 ? GLY A 155 LEU A 163 1 ? 9 HELX_P HELX_P5 5 GLY A 177 ? GLY A 187 ? GLY A 177 GLY A 187 1 ? 11 HELX_P HELX_P6 6 GLU A 230 ? PHE A 234 ? GLU A 230 PHE A 234 5 ? 5 HELX_P HELX_P7 7 LYS A 236 ? GLU A 246 ? LYS A 236 GLU A 246 5 ? 11 HELX_P HELX_P8 8 PHE A 247 ? TYR A 254 ? PHE A 247 TYR A 254 1 ? 8 HELX_P HELX_P9 9 CYS A 265 ? ASN A 273 ? CYS A 265 ASN A 273 1 ? 9 HELX_P HELX_P10 10 SER A 277 ? ILE A 288 ? SER A 277 ILE A 288 1 ? 12 HELX_P HELX_P11 11 GLU A 294 ? CYS A 299 ? GLU A 294 CYS A 299 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 278 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 299 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 278 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 299 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.042 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 74 A . ? ARG 74 A PRO 75 A ? PRO 75 A 1 -1.16 2 MET 91 A . ? MET 91 A PRO 92 A ? PRO 92 A 1 0.42 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 144 ? LYS A 147 ? ASP A 144 LYS A 147 A 2 GLU A 112 ? PHE A 117 ? GLU A 112 PHE A 117 A 3 ARG A 82 ? GLU A 87 ? ARG A 82 GLU A 87 A 4 ILE A 167 ? ALA A 171 ? ILE A 167 ALA A 171 A 5 SER A 218 ? GLY A 221 ? SER A 218 GLY A 221 A 6 VAL A 209 ? PHE A 214 ? VAL A 209 PHE A 214 A 7 LYS A 7 ? GLU A 15 ? LYS A 7 GLU A 15 A 8 TYR A 49 ? ASP A 56 ? TYR A 49 ASP A 56 A 9 THR A 59 ? VAL A 65 ? THR A 59 VAL A 65 A 10 THR A 29 ? PRO A 34 ? THR A 29 PRO A 34 A 11 MET A 18 ? LEU A 23 ? MET A 18 LEU A 23 A 12 LYS A 7 ? GLU A 15 ? LYS A 7 GLU A 15 B 1 LEU A 71 ? LEU A 72 ? LEU A 71 LEU A 72 B 2 VAL A 77 ? ALA A 78 ? VAL A 77 ALA A 78 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 146 ? O LEU A 146 N PHE A 117 ? N PHE A 117 A 2 3 O VAL A 116 ? O VAL A 116 N ILE A 85 ? N ILE A 85 A 3 4 N ILE A 84 ? N ILE A 84 O ILE A 169 ? O ILE A 169 A 4 5 N CYS A 168 ? N CYS A 168 O PHE A 219 ? O PHE A 219 A 5 6 O VAL A 220 ? O VAL A 220 N ILE A 212 ? N ILE A 212 A 6 7 O LEU A 211 ? O LEU A 211 N VAL A 12 ? N VAL A 12 A 7 8 N GLY A 9 ? N GLY A 9 O VAL A 50 ? O VAL A 50 A 8 9 N VAL A 55 ? N VAL A 55 O THR A 59 ? O THR A 59 A 9 10 O PHE A 60 ? O PHE A 60 N ARG A 31 ? N ARG A 31 A 10 11 O GLY A 32 ? O GLY A 32 N ILE A 19 ? N ILE A 19 A 11 12 O GLY A 20 ? O GLY A 20 N ASP A 13 ? N ASP A 13 B 1 2 N LEU A 72 ? N LEU A 72 O VAL A 77 ? O VAL A 77 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 303 ? 3 'BINDING SITE FOR RESIDUE ZN A 303' AC2 Software A CL 304 ? 2 'BINDING SITE FOR RESIDUE CL A 304' AC3 Software A GDP 1001 ? 15 'BINDING SITE FOR RESIDUE GDP A 1001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 CYS A 257 ? CYS A 257 . ? 1_555 ? 2 AC1 3 HIS A 259 ? HIS A 259 . ? 1_555 ? 3 AC1 3 CYS A 265 ? CYS A 265 . ? 1_555 ? 4 AC2 2 HIS A 259 ? HIS A 259 . ? 1_555 ? 5 AC2 2 ALA A 266 ? ALA A 266 . ? 1_555 ? 6 AC3 15 ASN A 118 ? ASN A 118 . ? 1_555 ? 7 AC3 15 LYS A 119 ? LYS A 119 . ? 1_555 ? 8 AC3 15 ASP A 121 ? ASP A 121 . ? 1_555 ? 9 AC3 15 LEU A 122 ? LEU A 122 . ? 1_555 ? 10 AC3 15 SER A 149 ? SER A 149 . ? 1_555 ? 11 AC3 15 ALA A 150 ? ALA A 150 . ? 1_555 ? 12 AC3 15 LYS A 151 ? LYS A 151 . ? 1_555 ? 13 AC3 15 GLY A 175 ? GLY A 175 . ? 1_555 ? 14 AC3 15 GLY A 177 ? GLY A 177 . ? 1_555 ? 15 AC3 15 LYS A 178 ? LYS A 178 . ? 1_555 ? 16 AC3 15 SER A 179 ? SER A 179 . ? 1_555 ? 17 AC3 15 SER A 180 ? SER A 180 . ? 1_555 ? 18 AC3 15 HOH E . ? HOH A 1064 . ? 1_555 ? 19 AC3 15 HOH E . ? HOH A 1108 . ? 1_555 ? 20 AC3 15 HOH E . ? HOH A 1115 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YV5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YV5 _atom_sites.fract_transf_matrix[1][1] 0.015838 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015838 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006357 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 TRP 51 51 51 TRP TRP A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 MET 91 91 91 MET MET A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 LYS 128 128 128 LYS LYS A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 TRP 134 134 134 TRP TRP A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 TYR 138 138 138 TYR TYR A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 TYR 162 162 162 TYR TYR A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 CYS 168 168 168 CYS CYS A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ARG 191 191 191 ARG ARG A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 SER 196 196 ? ? ? A . n A 1 197 GLU 197 197 ? ? ? A . n A 1 198 LYS 198 198 ? ? ? A . n A 1 199 THR 199 199 ? ? ? A . n A 1 200 GLU 200 200 ? ? ? A . n A 1 201 ARG 201 201 ? ? ? A . n A 1 202 GLY 202 202 ? ? ? A . n A 1 203 ARG 203 203 ? ? ? A . n A 1 204 HIS 204 204 ? ? ? A . n A 1 205 THR 205 205 205 THR ALA A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 PHE 214 214 214 PHE PHE A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 SER 218 218 218 SER SER A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 THR 223 223 223 THR THR A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 PHE 226 226 226 PHE PHE A . n A 1 227 SER 227 227 227 SER SER A . n A 1 228 LYS 228 228 228 LYS LYS A . n A 1 229 VAL 229 229 229 VAL VAL A . n A 1 230 GLU 230 230 230 GLU GLU A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 MET 233 233 233 MET MET A . n A 1 234 PHE 234 234 234 PHE PHE A . n A 1 235 VAL 235 235 235 VAL VAL A . n A 1 236 LYS 236 236 236 LYS LYS A . n A 1 237 PRO 237 237 237 PRO PRO A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 ARG 241 241 241 ARG ARG A . n A 1 242 ASN 242 242 242 ASN ASN A . n A 1 243 TYR 243 243 243 TYR TYR A . n A 1 244 PHE 244 244 244 PHE PHE A . n A 1 245 ARG 245 245 245 ARG ARG A . n A 1 246 GLU 246 246 246 GLU GLU A . n A 1 247 PHE 247 247 247 PHE PHE A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 ARG 249 249 249 ARG ARG A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 CYS 252 252 252 CYS CYS A . n A 1 253 LYS 253 253 253 LYS LYS A . n A 1 254 TYR 254 254 254 TYR TYR A . n A 1 255 PRO 255 255 255 PRO PRO A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 CYS 257 257 257 CYS CYS A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 HIS 259 259 259 HIS HIS A . n A 1 260 THR 260 260 260 THR THR A . n A 1 261 ASN 261 261 261 ASN ASN A . n A 1 262 GLU 262 262 262 GLU GLU A . n A 1 263 PRO 263 263 263 PRO PRO A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 CYS 265 265 265 CYS CYS A . n A 1 266 ALA 266 266 266 ALA ALA A . n A 1 267 VAL 267 267 267 VAL VAL A . n A 1 268 LYS 268 268 268 LYS LYS A . n A 1 269 GLU 269 269 269 GLU GLU A . n A 1 270 ALA 270 270 270 ALA ALA A . n A 1 271 VAL 271 271 271 VAL VAL A . n A 1 272 LYS 272 272 272 LYS LYS A . n A 1 273 ASN 273 273 273 ASN ASN A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 GLU 275 275 275 GLU GLU A . n A 1 276 ILE 276 276 276 ILE ILE A . n A 1 277 SER 277 277 277 SER SER A . n A 1 278 CYS 278 278 278 CYS CYS A . n A 1 279 GLU 279 279 279 GLU GLU A . n A 1 280 ARG 280 280 280 ARG ARG A . n A 1 281 TYR 281 281 281 TYR TYR A . n A 1 282 LYS 282 282 282 LYS LYS A . n A 1 283 SER 283 283 283 SER SER A . n A 1 284 TYR 284 284 284 TYR TYR A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 LYS 286 286 286 LYS LYS A . n A 1 287 ILE 287 287 287 ILE ILE A . n A 1 288 ILE 288 288 288 ILE ILE A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 TYR 291 291 291 TYR TYR A . n A 1 292 LEU 292 292 292 LEU LEU A . n A 1 293 GLU 293 293 293 GLU GLU A . n A 1 294 GLU 294 294 294 GLU GLU A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 LYS 296 296 296 LYS LYS A . n A 1 297 GLU 297 297 297 GLU GLU A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 CYS 299 299 299 CYS CYS A . n A 1 300 ARG 300 300 300 ARG ARG A . n A 1 301 GLU 301 301 301 GLU GLU A . n A 1 302 ASP 302 302 302 ASP ASP A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 303 303 ZN ZN A . C 3 CL 1 304 304 CL CL A . D 4 GDP 1 1001 1 GDP GDP A . E 5 HOH 1 1002 1 HOH HOH A . E 5 HOH 2 1003 2 HOH HOH A . E 5 HOH 3 1004 3 HOH HOH A . E 5 HOH 4 1005 4 HOH HOH A . E 5 HOH 5 1006 5 HOH HOH A . E 5 HOH 6 1007 6 HOH HOH A . E 5 HOH 7 1008 7 HOH HOH A . E 5 HOH 8 1009 8 HOH HOH A . E 5 HOH 9 1010 9 HOH HOH A . E 5 HOH 10 1011 10 HOH HOH A . E 5 HOH 11 1012 11 HOH HOH A . E 5 HOH 12 1013 12 HOH HOH A . E 5 HOH 13 1014 13 HOH HOH A . E 5 HOH 14 1015 14 HOH HOH A . E 5 HOH 15 1016 15 HOH HOH A . E 5 HOH 16 1017 16 HOH HOH A . E 5 HOH 17 1018 17 HOH HOH A . E 5 HOH 18 1019 18 HOH HOH A . E 5 HOH 19 1020 19 HOH HOH A . E 5 HOH 20 1021 20 HOH HOH A . E 5 HOH 21 1022 21 HOH HOH A . E 5 HOH 22 1023 22 HOH HOH A . E 5 HOH 23 1024 23 HOH HOH A . E 5 HOH 24 1025 25 HOH HOH A . E 5 HOH 25 1026 26 HOH HOH A . E 5 HOH 26 1027 27 HOH HOH A . E 5 HOH 27 1028 28 HOH HOH A . E 5 HOH 28 1029 29 HOH HOH A . E 5 HOH 29 1030 30 HOH HOH A . E 5 HOH 30 1031 31 HOH HOH A . E 5 HOH 31 1032 32 HOH HOH A . E 5 HOH 32 1033 33 HOH HOH A . E 5 HOH 33 1034 34 HOH HOH A . E 5 HOH 34 1035 35 HOH HOH A . E 5 HOH 35 1036 36 HOH HOH A . E 5 HOH 36 1037 37 HOH HOH A . E 5 HOH 37 1038 38 HOH HOH A . E 5 HOH 38 1039 39 HOH HOH A . E 5 HOH 39 1040 40 HOH HOH A . E 5 HOH 40 1041 41 HOH HOH A . E 5 HOH 41 1042 42 HOH HOH A . E 5 HOH 42 1043 43 HOH HOH A . E 5 HOH 43 1044 44 HOH HOH A . E 5 HOH 44 1045 45 HOH HOH A . E 5 HOH 45 1046 46 HOH HOH A . E 5 HOH 46 1047 47 HOH HOH A . E 5 HOH 47 1048 48 HOH HOH A . E 5 HOH 48 1049 49 HOH HOH A . E 5 HOH 49 1050 50 HOH HOH A . E 5 HOH 50 1051 51 HOH HOH A . E 5 HOH 51 1052 52 HOH HOH A . E 5 HOH 52 1053 53 HOH HOH A . E 5 HOH 53 1054 54 HOH HOH A . E 5 HOH 54 1055 55 HOH HOH A . E 5 HOH 55 1056 56 HOH HOH A . E 5 HOH 56 1057 57 HOH HOH A . E 5 HOH 57 1058 58 HOH HOH A . E 5 HOH 58 1059 59 HOH HOH A . E 5 HOH 59 1060 60 HOH HOH A . E 5 HOH 60 1061 61 HOH HOH A . E 5 HOH 61 1062 62 HOH HOH A . E 5 HOH 62 1063 63 HOH HOH A . E 5 HOH 63 1064 64 HOH HOH A . E 5 HOH 64 1065 65 HOH HOH A . E 5 HOH 65 1066 66 HOH HOH A . E 5 HOH 66 1067 67 HOH HOH A . E 5 HOH 67 1068 68 HOH HOH A . E 5 HOH 68 1069 69 HOH HOH A . E 5 HOH 69 1070 70 HOH HOH A . E 5 HOH 70 1071 71 HOH HOH A . E 5 HOH 71 1072 72 HOH HOH A . E 5 HOH 72 1073 73 HOH HOH A . E 5 HOH 73 1074 74 HOH HOH A . E 5 HOH 74 1075 75 HOH HOH A . E 5 HOH 75 1076 76 HOH HOH A . E 5 HOH 76 1077 77 HOH HOH A . E 5 HOH 77 1078 78 HOH HOH A . E 5 HOH 78 1079 79 HOH HOH A . E 5 HOH 79 1080 80 HOH HOH A . E 5 HOH 80 1081 81 HOH HOH A . E 5 HOH 81 1082 82 HOH HOH A . E 5 HOH 82 1083 83 HOH HOH A . E 5 HOH 83 1084 84 HOH HOH A . E 5 HOH 84 1085 85 HOH HOH A . E 5 HOH 85 1086 86 HOH HOH A . E 5 HOH 86 1087 87 HOH HOH A . E 5 HOH 87 1088 88 HOH HOH A . E 5 HOH 88 1089 89 HOH HOH A . E 5 HOH 89 1090 90 HOH HOH A . E 5 HOH 90 1091 91 HOH HOH A . E 5 HOH 91 1092 92 HOH HOH A . E 5 HOH 92 1093 93 HOH HOH A . E 5 HOH 93 1094 95 HOH HOH A . E 5 HOH 94 1095 96 HOH HOH A . E 5 HOH 95 1096 97 HOH HOH A . E 5 HOH 96 1097 98 HOH HOH A . E 5 HOH 97 1098 99 HOH HOH A . E 5 HOH 98 1099 100 HOH HOH A . E 5 HOH 99 1100 101 HOH HOH A . E 5 HOH 100 1101 102 HOH HOH A . E 5 HOH 101 1102 103 HOH HOH A . E 5 HOH 102 1103 104 HOH HOH A . E 5 HOH 103 1104 105 HOH HOH A . E 5 HOH 104 1105 106 HOH HOH A . E 5 HOH 105 1106 107 HOH HOH A . E 5 HOH 106 1107 108 HOH HOH A . E 5 HOH 107 1108 109 HOH HOH A . E 5 HOH 108 1109 110 HOH HOH A . E 5 HOH 109 1110 111 HOH HOH A . E 5 HOH 110 1111 112 HOH HOH A . E 5 HOH 111 1112 113 HOH HOH A . E 5 HOH 112 1113 114 HOH HOH A . E 5 HOH 113 1114 115 HOH HOH A . E 5 HOH 114 1115 116 HOH HOH A . E 5 HOH 115 1116 117 HOH HOH A . E 5 HOH 116 1117 118 HOH HOH A . E 5 HOH 117 1118 119 HOH HOH A . E 5 HOH 118 1119 120 HOH HOH A . E 5 HOH 119 1120 121 HOH HOH A . E 5 HOH 120 1121 122 HOH HOH A . E 5 HOH 121 1122 124 HOH HOH A . E 5 HOH 122 1123 125 HOH HOH A . E 5 HOH 123 1124 126 HOH HOH A . E 5 HOH 124 1125 127 HOH HOH A . E 5 HOH 125 1126 128 HOH HOH A . E 5 HOH 126 1127 129 HOH HOH A . E 5 HOH 127 1128 130 HOH HOH A . E 5 HOH 128 1129 131 HOH HOH A . E 5 HOH 129 1130 132 HOH HOH A . E 5 HOH 130 1131 133 HOH HOH A . E 5 HOH 131 1132 134 HOH HOH A . E 5 HOH 132 1133 135 HOH HOH A . E 5 HOH 133 1134 136 HOH HOH A . E 5 HOH 134 1135 137 HOH HOH A . E 5 HOH 135 1136 138 HOH HOH A . E 5 HOH 136 1137 140 HOH HOH A . E 5 HOH 137 1138 141 HOH HOH A . E 5 HOH 138 1139 142 HOH HOH A . E 5 HOH 139 1140 143 HOH HOH A . E 5 HOH 140 1141 144 HOH HOH A . E 5 HOH 141 1142 145 HOH HOH A . E 5 HOH 142 1143 146 HOH HOH A . E 5 HOH 143 1144 147 HOH HOH A . E 5 HOH 144 1145 148 HOH HOH A . E 5 HOH 145 1146 149 HOH HOH A . E 5 HOH 146 1147 150 HOH HOH A . E 5 HOH 147 1148 152 HOH HOH A . E 5 HOH 148 1149 153 HOH HOH A . E 5 HOH 149 1150 154 HOH HOH A . E 5 HOH 150 1151 156 HOH HOH A . E 5 HOH 151 1152 157 HOH HOH A . E 5 HOH 152 1153 158 HOH HOH A . E 5 HOH 153 1154 159 HOH HOH A . E 5 HOH 154 1155 160 HOH HOH A . E 5 HOH 155 1156 161 HOH HOH A . E 5 HOH 156 1157 162 HOH HOH A . E 5 HOH 157 1158 163 HOH HOH A . E 5 HOH 158 1159 164 HOH HOH A . E 5 HOH 159 1160 165 HOH HOH A . E 5 HOH 160 1161 166 HOH HOH A . E 5 HOH 161 1162 167 HOH HOH A . E 5 HOH 162 1163 168 HOH HOH A . E 5 HOH 163 1164 171 HOH HOH A . E 5 HOH 164 1165 172 HOH HOH A . E 5 HOH 165 1166 173 HOH HOH A . E 5 HOH 166 1167 174 HOH HOH A . E 5 HOH 167 1168 175 HOH HOH A . E 5 HOH 168 1169 176 HOH HOH A . E 5 HOH 169 1170 177 HOH HOH A . E 5 HOH 170 1171 178 HOH HOH A . E 5 HOH 171 1172 179 HOH HOH A . E 5 HOH 172 1173 180 HOH HOH A . E 5 HOH 173 1174 181 HOH HOH A . E 5 HOH 174 1175 183 HOH HOH A . E 5 HOH 175 1176 185 HOH HOH A . E 5 HOH 176 1177 187 HOH HOH A . E 5 HOH 177 1178 189 HOH HOH A . E 5 HOH 178 1179 190 HOH HOH A . E 5 HOH 179 1180 191 HOH HOH A . E 5 HOH 180 1181 192 HOH HOH A . E 5 HOH 181 1182 193 HOH HOH A . E 5 HOH 182 1183 194 HOH HOH A . E 5 HOH 183 1184 195 HOH HOH A . E 5 HOH 184 1185 196 HOH HOH A . E 5 HOH 185 1186 197 HOH HOH A . E 5 HOH 186 1187 198 HOH HOH A . E 5 HOH 187 1188 199 HOH HOH A . E 5 HOH 188 1189 200 HOH HOH A . E 5 HOH 189 1190 201 HOH HOH A . E 5 HOH 190 1191 202 HOH HOH A . E 5 HOH 191 1192 203 HOH HOH A . E 5 HOH 192 1193 204 HOH HOH A . E 5 HOH 193 1194 205 HOH HOH A . E 5 HOH 194 1195 206 HOH HOH A . E 5 HOH 195 1196 207 HOH HOH A . E 5 HOH 196 1197 208 HOH HOH A . E 5 HOH 197 1198 209 HOH HOH A . E 5 HOH 198 1199 210 HOH HOH A . E 5 HOH 199 1200 211 HOH HOH A . E 5 HOH 200 1201 212 HOH HOH A . E 5 HOH 201 1202 213 HOH HOH A . E 5 HOH 202 1203 214 HOH HOH A . E 5 HOH 203 1204 215 HOH HOH A . E 5 HOH 204 1205 216 HOH HOH A . E 5 HOH 205 1206 217 HOH HOH A . E 5 HOH 206 1207 218 HOH HOH A . E 5 HOH 207 1208 219 HOH HOH A . E 5 HOH 208 1209 220 HOH HOH A . E 5 HOH 209 1210 221 HOH HOH A . E 5 HOH 210 1211 222 HOH HOH A . E 5 HOH 211 1212 223 HOH HOH A . E 5 HOH 212 1213 224 HOH HOH A . E 5 HOH 213 1214 225 HOH HOH A . E 5 HOH 214 1215 226 HOH HOH A . E 5 HOH 215 1216 227 HOH HOH A . E 5 HOH 216 1217 228 HOH HOH A . E 5 HOH 217 1218 229 HOH HOH A . E 5 HOH 218 1219 230 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 MOLREP phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 16 ? ? 29.63 -82.84 2 1 LEU A 39 ? ? -66.87 45.46 3 1 LYS A 40 ? ? -169.00 31.36 4 1 LYS A 41 ? ? -160.91 8.24 5 1 ARG A 74 ? ? -160.98 104.36 6 1 THR A 192 ? ? -117.39 -99.81 7 1 GLN A 193 ? ? -152.79 -59.94 8 1 GLU A 194 ? ? -177.74 88.56 9 1 THR A 206 ? ? -170.72 76.25 10 1 THR A 207 ? ? -92.51 -62.35 11 1 SER A 227 ? ? -104.14 -62.51 12 1 THR A 260 ? ? -117.61 -91.93 13 1 ARG A 300 ? ? -157.95 8.80 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 205 ? OG1 ? A THR 205 OG1 2 1 Y 1 A THR 205 ? CG2 ? A THR 205 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 196 ? A SER 196 2 1 Y 1 A GLU 197 ? A GLU 197 3 1 Y 1 A LYS 198 ? A LYS 198 4 1 Y 1 A THR 199 ? A THR 199 5 1 Y 1 A GLU 200 ? A GLU 200 6 1 Y 1 A ARG 201 ? A ARG 201 7 1 Y 1 A GLY 202 ? A GLY 202 8 1 Y 1 A ARG 203 ? A ARG 203 9 1 Y 1 A HIS 204 ? A HIS 204 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GDP PB P N N 89 GDP O1B O N N 90 GDP O2B O N N 91 GDP O3B O N N 92 GDP O3A O N N 93 GDP PA P N N 94 GDP O1A O N N 95 GDP O2A O N N 96 GDP "O5'" O N N 97 GDP "C5'" C N N 98 GDP "C4'" C N R 99 GDP "O4'" O N N 100 GDP "C3'" C N S 101 GDP "O3'" O N N 102 GDP "C2'" C N R 103 GDP "O2'" O N N 104 GDP "C1'" C N R 105 GDP N9 N Y N 106 GDP C8 C Y N 107 GDP N7 N Y N 108 GDP C5 C Y N 109 GDP C6 C N N 110 GDP O6 O N N 111 GDP N1 N N N 112 GDP C2 C N N 113 GDP N2 N N N 114 GDP N3 N N N 115 GDP C4 C Y N 116 GDP HOB2 H N N 117 GDP HOB3 H N N 118 GDP HOA2 H N N 119 GDP "H5'" H N N 120 GDP "H5''" H N N 121 GDP "H4'" H N N 122 GDP "H3'" H N N 123 GDP "HO3'" H N N 124 GDP "H2'" H N N 125 GDP "HO2'" H N N 126 GDP "H1'" H N N 127 GDP H8 H N N 128 GDP HN1 H N N 129 GDP HN21 H N N 130 GDP HN22 H N N 131 GLN N N N N 132 GLN CA C N S 133 GLN C C N N 134 GLN O O N N 135 GLN CB C N N 136 GLN CG C N N 137 GLN CD C N N 138 GLN OE1 O N N 139 GLN NE2 N N N 140 GLN OXT O N N 141 GLN H H N N 142 GLN H2 H N N 143 GLN HA H N N 144 GLN HB2 H N N 145 GLN HB3 H N N 146 GLN HG2 H N N 147 GLN HG3 H N N 148 GLN HE21 H N N 149 GLN HE22 H N N 150 GLN HXT H N N 151 GLU N N N N 152 GLU CA C N S 153 GLU C C N N 154 GLU O O N N 155 GLU CB C N N 156 GLU CG C N N 157 GLU CD C N N 158 GLU OE1 O N N 159 GLU OE2 O N N 160 GLU OXT O N N 161 GLU H H N N 162 GLU H2 H N N 163 GLU HA H N N 164 GLU HB2 H N N 165 GLU HB3 H N N 166 GLU HG2 H N N 167 GLU HG3 H N N 168 GLU HE2 H N N 169 GLU HXT H N N 170 GLY N N N N 171 GLY CA C N N 172 GLY C C N N 173 GLY O O N N 174 GLY OXT O N N 175 GLY H H N N 176 GLY H2 H N N 177 GLY HA2 H N N 178 GLY HA3 H N N 179 GLY HXT H N N 180 HIS N N N N 181 HIS CA C N S 182 HIS C C N N 183 HIS O O N N 184 HIS CB C N N 185 HIS CG C Y N 186 HIS ND1 N Y N 187 HIS CD2 C Y N 188 HIS CE1 C Y N 189 HIS NE2 N Y N 190 HIS OXT O N N 191 HIS H H N N 192 HIS H2 H N N 193 HIS HA H N N 194 HIS HB2 H N N 195 HIS HB3 H N N 196 HIS HD1 H N N 197 HIS HD2 H N N 198 HIS HE1 H N N 199 HIS HE2 H N N 200 HIS HXT H N N 201 HOH O O N N 202 HOH H1 H N N 203 HOH H2 H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 ZN ZN ZN N N 435 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'CHLORIDE ION' CL 4 "GUANOSINE-5'-DIPHOSPHATE" GDP 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1U0L _pdbx_initial_refinement_model.details ? #