data_2ZGD # _entry.id 2ZGD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZGD pdb_00002zgd 10.2210/pdb2zgd/pdb RCSB RCSB027937 ? ? WWPDB D_1000027937 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2ZGG _pdbx_database_related.details 'the same protein, unhydroxylated ASN 84' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2ZGD _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-01-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'McDonough, M.A.' 1 'Schofield, C.J.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Asparagine beta-hydroxylation stabilizes the ankyrin repeat domain fold' 'Mol Biosyst' 5 52 58 2009 ? UK 1742-206X ? ? 19081931 10.1039/b815271c 1 'Asparaginyl hydroxylation of the Notch ankyrin repeat domain by factor inhibiting hypoxia-inducible factor' J.Biol.Chem. 282 24027 24038 2007 JBCHA3 US 0021-9258 0071 ? 17573339 10.1074/jbc.M704102200 2 ;Posttranslational hydroxylation of ankyrin repeats in IkappaB proteins by the hypoxia-inducible factor (HIF) asparaginyl hydroxylase, factor inhibiting HIF (FIH) ; Proc.Natl.Acad.Sci.Usa 103 14767 14772 2006 PNASA6 US 0027-8424 0040 ? 17003112 10.1073/pnas.0606877103 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kelly, L.' 1 ? primary 'McDonough, M.A.' 2 ? primary 'Coleman, M.L.' 3 ? primary 'Ratcliffe, P.J.' 4 ? primary 'Schofield, C.J.' 5 ? 1 'Coleman, M.L.' 6 ? 1 'McDonough, M.A.' 7 ? 1 'Hewitson, K.S.' 8 ? 1 'Coles, C.' 9 ? 1 'Mecinovic, J.' 10 ? 1 'Edelmann, M.' 11 ? 1 'Cook, K.M.' 12 ? 1 'Cockman, M.E.' 13 ? 1 'Lancaster, D.E.' 14 ? 1 'Kessler, B.M.' 15 ? 1 'Oldham, N.J.' 16 ? 1 'Ratcliffe, P.J.' 17 ? 1 'Schofield, C.J.' 18 ? 2 'Cockman, M.E.' 19 ? 2 'Lancaster, D.E.' 20 ? 2 'Stolze, I.P.' 21 ? 2 'Hewitson, K.S.' 22 ? 2 'McDonough, M.A.' 23 ? 2 'Coleman, M.L.' 24 ? 2 'Coles, C.H.' 25 ? 2 'Yu, X.' 26 ? 2 'Hay, R.T.' 27 ? 2 'Ley, S.C.' 28 ? 2 'Pugh, C.W.' 29 ? 2 'Oldham, N.J.' 30 ? 2 'Masson, N.' 31 ? 2 'Schofield, C.J.' 32 ? 2 'Ratcliffe, P.J.' 33 ? # _cell.entry_id 2ZGD _cell.length_a 48.887 _cell.length_b 48.887 _cell.length_c 67.088 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZGD _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '3 repeat synthetic ankyrin' 11652.906 1 ? ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 5 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 water nat water 18.015 77 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSSHHHHHHSSGLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG ADV(AHB)AQDKFGKTAFDISIDNGNEDLAEILQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSHHHHHHSSGLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG ADVNAQDKFGKTAFDISIDNGNEDLAEILQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 SER n 1 11 SER n 1 12 GLY n 1 13 LEU n 1 14 VAL n 1 15 PRO n 1 16 ARG n 1 17 GLY n 1 18 SER n 1 19 HIS n 1 20 MET n 1 21 GLY n 1 22 SER n 1 23 ASP n 1 24 LEU n 1 25 GLY n 1 26 LYS n 1 27 LYS n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 ALA n 1 32 ALA n 1 33 ARG n 1 34 ALA n 1 35 GLY n 1 36 GLN n 1 37 ASP n 1 38 ASP n 1 39 GLU n 1 40 VAL n 1 41 ARG n 1 42 ILE n 1 43 LEU n 1 44 MET n 1 45 ALA n 1 46 ASN n 1 47 GLY n 1 48 ALA n 1 49 ASP n 1 50 VAL n 1 51 ALA n 1 52 ALA n 1 53 LYS n 1 54 ASP n 1 55 LYS n 1 56 ASN n 1 57 GLY n 1 58 SER n 1 59 THR n 1 60 PRO n 1 61 LEU n 1 62 HIS n 1 63 LEU n 1 64 ALA n 1 65 ALA n 1 66 ARG n 1 67 ASN n 1 68 GLY n 1 69 HIS n 1 70 LEU n 1 71 GLU n 1 72 VAL n 1 73 VAL n 1 74 LYS n 1 75 LEU n 1 76 LEU n 1 77 LEU n 1 78 GLU n 1 79 ALA n 1 80 GLY n 1 81 ALA n 1 82 ASP n 1 83 VAL n 1 84 AHB n 1 85 ALA n 1 86 GLN n 1 87 ASP n 1 88 LYS n 1 89 PHE n 1 90 GLY n 1 91 LYS n 1 92 THR n 1 93 ALA n 1 94 PHE n 1 95 ASP n 1 96 ILE n 1 97 SER n 1 98 ILE n 1 99 ASP n 1 100 ASN n 1 101 GLY n 1 102 ASN n 1 103 GLU n 1 104 ASP n 1 105 LEU n 1 106 ALA n 1 107 GLU n 1 108 ILE n 1 109 LEU n 1 110 GLN n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'synthetically designed construct' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2ZGD _struct_ref.pdbx_db_accession 2ZGD _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GSSHHHHHHSSGLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG ADVNAQDKFGKTAFDISIDNGNEDLAEILQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2ZGD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2ZGD _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 110 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 110 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AHB 'L-peptide linking' n BETA-HYDROXYASPARAGINE ? 'C4 H8 N2 O4' 148.117 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2ZGD _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '30% PEG 400, 100mM Na Acetate pH 4.6, 100mM CdCl2, vapor diffusion, sitting drop, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-10-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator Si111 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.2' _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.2 # _reflns.entry_id 2ZGD _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 50.000 _reflns.number_obs 7197 _reflns.pdbx_Rmerge_I_obs 0.134 _reflns.pdbx_netI_over_sigmaI 7.400 _reflns.pdbx_chi_squared 1.007 _reflns.pdbx_redundancy 4.900 _reflns.percent_possible_obs 93.300 _reflns.number_all 7197 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.90 1.97 ? ? ? 0.392 3.75 ? 1.084 4.80 ? 727 95.80 ? 1 1.97 2.05 ? ? ? 0.308 ? ? 1.098 4.90 ? 712 95.70 ? 2 2.05 2.14 ? ? ? 0.238 ? ? 0.969 4.90 ? 722 95.40 ? 3 2.14 2.25 ? ? ? 0.203 ? ? 1.020 4.90 ? 715 94.80 ? 4 2.25 2.39 ? ? ? 0.170 ? ? 0.957 5.00 ? 714 94.80 ? 5 2.39 2.58 ? ? ? 0.148 ? ? 0.989 5.00 ? 731 93.80 ? 6 2.58 2.84 ? ? ? 0.122 ? ? 0.983 4.90 ? 714 93.60 ? 7 2.84 3.25 ? ? ? 0.108 ? ? 0.960 5.00 ? 717 92.60 ? 8 3.25 4.09 ? ? ? 0.091 ? ? 0.965 5.00 ? 710 90.90 ? 9 4.09 50.00 ? ? ? 0.112 ? ? 1.046 4.80 ? 735 86.20 ? 10 # _refine.entry_id 2ZGD _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 26.290 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF 115538.633 _refine.pdbx_data_cutoff_low_absF 0.000 _refine.ls_percent_reflns_obs 89.400 _refine.ls_number_reflns_obs 6875 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'BULK SOLVENT MODEL USED' _refine.ls_R_factor_R_work 0.173 _refine.ls_R_factor_R_free 0.224 _refine.ls_percent_reflns_R_free 10.000 _refine.ls_number_reflns_R_free 689 _refine.ls_R_factor_R_free_error 0.009 _refine.B_iso_mean 19.600 _refine.solvent_model_param_bsol 70.502 _refine.solvent_model_param_ksol 0.386 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.aniso_B[1][1] -1.890 _refine.aniso_B[2][2] -1.890 _refine.aniso_B[3][3] 3.790 _refine.aniso_B[1][2] -1.760 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.overall_FOM_work_R_set 0.876 _refine.pdbx_starting_model 'PDB ENTRY 1N0Q' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2ZGD _refine_analyze.Luzzati_coordinate_error_obs 0.170 _refine_analyze.Luzzati_sigma_a_obs 0.130 _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_coordinate_error_free 0.230 _refine_analyze.Luzzati_sigma_a_free 0.150 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 698 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 782 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 26.290 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.010 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.300 ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? 20.100 ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? 1.000 ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 2.020 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 88.000 _refine_ls_shell.number_reflns_R_work 1013 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.207 _refine_ls_shell.R_factor_R_free 0.247 _refine_ls_shell.percent_reflns_R_free 8.200 _refine_ls_shell.number_reflns_R_free 90 _refine_ls_shell.R_factor_R_free_error 0.026 _refine_ls_shell.number_reflns_all 1103 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 2ZGD _struct.title 'Asn-hydroxylation stabilises the ankyrin repeat domain fold' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZGD _struct_keywords.text 'ankyrin repeat, hydroxylated, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 23 ? GLY A 35 ? ASP A 23 GLY A 35 1 ? 13 HELX_P HELX_P2 2 GLN A 36 ? ASN A 46 ? GLN A 36 ASN A 46 1 ? 11 HELX_P HELX_P3 3 THR A 59 ? ASN A 67 ? THR A 59 ASN A 67 1 ? 9 HELX_P HELX_P4 4 HIS A 69 ? ALA A 79 ? HIS A 69 ALA A 79 1 ? 11 HELX_P HELX_P5 5 THR A 92 ? GLY A 101 ? THR A 92 GLY A 101 1 ? 10 HELX_P HELX_P6 6 ASN A 102 ? GLN A 110 ? ASN A 102 GLN A 110 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 83 C ? ? ? 1_555 A AHB 84 N ? ? A VAL 83 A AHB 84 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A AHB 84 C ? ? ? 1_555 A ALA 85 N ? ? A AHB 84 A ALA 85 1_555 ? ? ? ? ? ? ? 1.332 ? ? metalc1 metalc ? ? A ASP 23 OD1 ? ? ? 1_555 F CD . CD ? ? A ASP 23 A CD 414 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc2 metalc ? ? A ASP 23 OD2 ? ? ? 1_555 F CD . CD ? ? A ASP 23 A CD 414 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc3 metalc ? ? A GLU 30 OE2 ? ? ? 1_555 B CD . CD ? ? A GLU 30 A CD 410 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc4 metalc ? ? A GLN 36 OE1 ? ? ? 1_555 B CD . CD ? ? A GLN 36 A CD 410 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc5 metalc ? ? A ASP 38 OD2 ? ? ? 1_555 E CD . CD ? ? A ASP 38 A CD 413 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc6 metalc ? ? A GLU 39 OE1 ? ? ? 1_555 B CD . CD ? ? A GLU 39 A CD 410 1_555 ? ? ? ? ? ? ? 2.214 ? ? metalc7 metalc ? ? A GLU 39 OE2 ? ? ? 1_555 B CD . CD ? ? A GLU 39 A CD 410 1_555 ? ? ? ? ? ? ? 2.518 ? ? metalc8 metalc ? ? A GLU 107 OE1 ? ? ? 1_555 C CD . CD ? ? A GLU 107 A CD 411 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc9 metalc ? ? A GLU 107 OE2 ? ? ? 1_555 C CD . CD ? ? A GLU 107 A CD 411 1_555 ? ? ? ? ? ? ? 2.490 ? ? metalc10 metalc ? ? C CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 411 A HOH 1018 1_555 ? ? ? ? ? ? ? 2.492 ? ? metalc11 metalc ? ? C CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 411 A HOH 1019 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc12 metalc ? ? D CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 412 A HOH 1020 1_555 ? ? ? ? ? ? ? 2.504 ? ? metalc13 metalc ? ? E CD . CD ? ? ? 1_555 I HOH . O ? ? A CD 413 A HOH 1046 1_555 ? ? ? ? ? ? ? 2.126 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CD 410 ? 4 'BINDING SITE FOR RESIDUE CD A 410' AC2 Software A CD 411 ? 5 'BINDING SITE FOR RESIDUE CD A 411' AC3 Software A CD 412 ? 10 'BINDING SITE FOR RESIDUE CD A 412' AC4 Software A CD 413 ? 5 'BINDING SITE FOR RESIDUE CD A 413' AC5 Software A CD 414 ? 3 'BINDING SITE FOR RESIDUE CD A 414' AC6 Software A CL 415 ? 7 'BINDING SITE FOR RESIDUE CL A 415' AC7 Software A CL 416 ? 5 'BINDING SITE FOR RESIDUE CL A 416' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 30 ? GLU A 30 . ? 1_555 ? 2 AC1 4 GLN A 36 ? GLN A 36 . ? 1_555 ? 3 AC1 4 GLU A 39 ? GLU A 39 . ? 1_555 ? 4 AC1 4 ASP A 95 ? ASP A 95 . ? 4_565 ? 5 AC2 5 HIS A 7 ? HIS A 7 . ? 6_555 ? 6 AC2 5 HIS A 9 ? HIS A 9 . ? 6_555 ? 7 AC2 5 GLU A 107 ? GLU A 107 . ? 1_555 ? 8 AC2 5 HOH I . ? HOH A 1018 . ? 1_555 ? 9 AC2 5 HOH I . ? HOH A 1019 . ? 1_555 ? 10 AC3 10 CL G . ? CL A 415 . ? 1_555 ? 11 AC3 10 CL G . ? CL A 415 . ? 6_555 ? 12 AC3 10 HOH I . ? HOH A 1020 . ? 1_555 ? 13 AC3 10 HOH I . ? HOH A 1020 . ? 6_555 ? 14 AC3 10 HOH I . ? HOH A 1050 . ? 1_555 ? 15 AC3 10 HOH I . ? HOH A 1050 . ? 6_555 ? 16 AC3 10 HOH I . ? HOH A 1065 . ? 1_555 ? 17 AC3 10 HOH I . ? HOH A 1065 . ? 6_555 ? 18 AC3 10 HOH I . ? HOH A 1066 . ? 6_555 ? 19 AC3 10 HOH I . ? HOH A 1066 . ? 1_555 ? 20 AC4 5 ASP A 37 ? ASP A 37 . ? 1_555 ? 21 AC4 5 ASP A 38 ? ASP A 38 . ? 1_555 ? 22 AC4 5 ASP A 38 ? ASP A 38 . ? 6_555 ? 23 AC4 5 CL H . ? CL A 416 . ? 1_555 ? 24 AC4 5 HOH I . ? HOH A 1046 . ? 1_555 ? 25 AC5 3 ASP A 23 ? ASP A 23 . ? 1_555 ? 26 AC5 3 HOH I . ? HOH A 1039 . ? 1_555 ? 27 AC5 3 HOH I . ? HOH A 1045 . ? 1_555 ? 28 AC6 7 HIS A 69 ? HIS A 69 . ? 1_555 ? 29 AC6 7 GLU A 71 ? GLU A 71 . ? 1_555 ? 30 AC6 7 VAL A 72 ? VAL A 72 . ? 1_555 ? 31 AC6 7 CD D . ? CD A 412 . ? 6_555 ? 32 AC6 7 CD D . ? CD A 412 . ? 1_555 ? 33 AC6 7 HOH I . ? HOH A 1065 . ? 6_555 ? 34 AC6 7 HOH I . ? HOH A 1066 . ? 1_555 ? 35 AC7 5 GLN A 36 ? GLN A 36 . ? 6_555 ? 36 AC7 5 ASP A 38 ? ASP A 38 . ? 6_555 ? 37 AC7 5 GLU A 39 ? GLU A 39 . ? 6_555 ? 38 AC7 5 CD E . ? CD A 413 . ? 1_555 ? 39 AC7 5 HOH I . ? HOH A 1046 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZGD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2ZGD _atom_sites.fract_transf_matrix[1][1] 0.020455 _atom_sites.fract_transf_matrix[1][2] 0.011810 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023620 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014906 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 HIS 4 4 ? ? ? A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LEU 13 13 ? ? ? A . n A 1 14 VAL 14 14 ? ? ? A . n A 1 15 PRO 15 15 ? ? ? A . n A 1 16 ARG 16 16 ? ? ? A . n A 1 17 GLY 17 17 ? ? ? A . n A 1 18 SER 18 18 ? ? ? A . n A 1 19 HIS 19 19 ? ? ? A . n A 1 20 MET 20 20 ? ? ? A . n A 1 21 GLY 21 21 ? ? ? A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 AHB 84 84 84 AHB AHB A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 GLN 110 110 110 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD 1 410 410 CD CD A . C 2 CD 1 411 411 CD CD A . D 2 CD 1 412 412 CD CD A . E 2 CD 1 413 413 CD CD A . F 2 CD 1 414 414 CD CD A . G 3 CL 1 415 415 CL CL A . H 3 CL 1 416 416 CL CL A . I 4 HOH 1 1001 1001 HOH HOH A . I 4 HOH 2 1002 1002 HOH HOH A . I 4 HOH 3 1003 1003 HOH HOH A . I 4 HOH 4 1004 1004 HOH HOH A . I 4 HOH 5 1005 1005 HOH HOH A . I 4 HOH 6 1006 1006 HOH HOH A . I 4 HOH 7 1007 1007 HOH HOH A . I 4 HOH 8 1008 1008 HOH HOH A . I 4 HOH 9 1009 1009 HOH HOH A . I 4 HOH 10 1010 1010 HOH HOH A . I 4 HOH 11 1011 1011 HOH HOH A . I 4 HOH 12 1012 1012 HOH HOH A . I 4 HOH 13 1013 1013 HOH HOH A . I 4 HOH 14 1014 1014 HOH HOH A . I 4 HOH 15 1015 1015 HOH HOH A . I 4 HOH 16 1016 1016 HOH HOH A . I 4 HOH 17 1017 1017 HOH HOH A . I 4 HOH 18 1018 1018 HOH HOH A . I 4 HOH 19 1019 1019 HOH HOH A . I 4 HOH 20 1020 1020 HOH HOH A . I 4 HOH 21 1021 1021 HOH HOH A . I 4 HOH 22 1022 1022 HOH HOH A . I 4 HOH 23 1023 1023 HOH HOH A . I 4 HOH 24 1024 1024 HOH HOH A . I 4 HOH 25 1025 1025 HOH HOH A . I 4 HOH 26 1026 1026 HOH HOH A . I 4 HOH 27 1027 1027 HOH HOH A . I 4 HOH 28 1028 1028 HOH HOH A . I 4 HOH 29 1029 1029 HOH HOH A . I 4 HOH 30 1030 1030 HOH HOH A . I 4 HOH 31 1031 1031 HOH HOH A . I 4 HOH 32 1032 1032 HOH HOH A . I 4 HOH 33 1033 1033 HOH HOH A . I 4 HOH 34 1034 1034 HOH HOH A . I 4 HOH 35 1035 1035 HOH HOH A . I 4 HOH 36 1036 1036 HOH HOH A . I 4 HOH 37 1037 1037 HOH HOH A . I 4 HOH 38 1038 1038 HOH HOH A . I 4 HOH 39 1039 1039 HOH HOH A . I 4 HOH 40 1040 1040 HOH HOH A . I 4 HOH 41 1041 1041 HOH HOH A . I 4 HOH 42 1042 1042 HOH HOH A . I 4 HOH 43 1043 1043 HOH HOH A . I 4 HOH 44 1044 1044 HOH HOH A . I 4 HOH 45 1045 1045 HOH HOH A . I 4 HOH 46 1046 1046 HOH HOH A . I 4 HOH 47 1047 1047 HOH HOH A . I 4 HOH 48 1048 1048 HOH HOH A . I 4 HOH 49 1049 1049 HOH HOH A . I 4 HOH 50 1050 1050 HOH HOH A . I 4 HOH 51 1051 1051 HOH HOH A . I 4 HOH 52 1052 1052 HOH HOH A . I 4 HOH 53 1053 1053 HOH HOH A . I 4 HOH 54 1054 1054 HOH HOH A . I 4 HOH 55 1055 1055 HOH HOH A . I 4 HOH 56 1056 1056 HOH HOH A . I 4 HOH 57 1057 1057 HOH HOH A . I 4 HOH 58 1058 1058 HOH HOH A . I 4 HOH 59 1059 1059 HOH HOH A . I 4 HOH 60 1060 1060 HOH HOH A . I 4 HOH 61 1061 1061 HOH HOH A . I 4 HOH 62 1062 1062 HOH HOH A . I 4 HOH 63 1063 1063 HOH HOH A . I 4 HOH 64 1064 1064 HOH HOH A . I 4 HOH 65 1065 1065 HOH HOH A . I 4 HOH 66 1066 1066 HOH HOH A . I 4 HOH 67 1067 1067 HOH HOH A . I 4 HOH 68 1068 1068 HOH HOH A . I 4 HOH 69 1069 1069 HOH HOH A . I 4 HOH 70 1070 1070 HOH HOH A . I 4 HOH 71 1071 1071 HOH HOH A . I 4 HOH 72 1072 1072 HOH HOH A . I 4 HOH 73 1073 1073 HOH HOH A . I 4 HOH 74 1074 1074 HOH HOH A . I 4 HOH 75 1075 1075 HOH HOH A . I 4 HOH 76 1076 1076 HOH HOH A . I 4 HOH 77 1077 1077 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id AHB _pdbx_struct_mod_residue.label_seq_id 84 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id AHB _pdbx_struct_mod_residue.auth_seq_id 84 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details BETA-HYDROXYASPARAGINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 2 1,2 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3050 ? 2 MORE -119 ? 2 'SSA (A^2)' 8750 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 22.3626666667 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CD 412 ? D CD . 2 1 A HOH 1003 ? I HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 23 ? A ASP 23 ? 1_555 CD ? F CD . ? A CD 414 ? 1_555 OD2 ? A ASP 23 ? A ASP 23 ? 1_555 53.8 ? 2 OE2 ? A GLU 30 ? A GLU 30 ? 1_555 CD ? B CD . ? A CD 410 ? 1_555 OE1 ? A GLN 36 ? A GLN 36 ? 1_555 109.3 ? 3 OE2 ? A GLU 30 ? A GLU 30 ? 1_555 CD ? B CD . ? A CD 410 ? 1_555 OE1 ? A GLU 39 ? A GLU 39 ? 1_555 92.5 ? 4 OE1 ? A GLN 36 ? A GLN 36 ? 1_555 CD ? B CD . ? A CD 410 ? 1_555 OE1 ? A GLU 39 ? A GLU 39 ? 1_555 95.9 ? 5 OE2 ? A GLU 30 ? A GLU 30 ? 1_555 CD ? B CD . ? A CD 410 ? 1_555 OE2 ? A GLU 39 ? A GLU 39 ? 1_555 146.9 ? 6 OE1 ? A GLN 36 ? A GLN 36 ? 1_555 CD ? B CD . ? A CD 410 ? 1_555 OE2 ? A GLU 39 ? A GLU 39 ? 1_555 79.5 ? 7 OE1 ? A GLU 39 ? A GLU 39 ? 1_555 CD ? B CD . ? A CD 410 ? 1_555 OE2 ? A GLU 39 ? A GLU 39 ? 1_555 54.5 ? 8 OD2 ? A ASP 38 ? A ASP 38 ? 1_555 CD ? E CD . ? A CD 413 ? 1_555 O ? I HOH . ? A HOH 1046 ? 1_555 125.4 ? 9 OE1 ? A GLU 107 ? A GLU 107 ? 1_555 CD ? C CD . ? A CD 411 ? 1_555 OE2 ? A GLU 107 ? A GLU 107 ? 1_555 53.0 ? 10 OE1 ? A GLU 107 ? A GLU 107 ? 1_555 CD ? C CD . ? A CD 411 ? 1_555 O ? I HOH . ? A HOH 1018 ? 1_555 91.4 ? 11 OE2 ? A GLU 107 ? A GLU 107 ? 1_555 CD ? C CD . ? A CD 411 ? 1_555 O ? I HOH . ? A HOH 1018 ? 1_555 91.5 ? 12 OE1 ? A GLU 107 ? A GLU 107 ? 1_555 CD ? C CD . ? A CD 411 ? 1_555 O ? I HOH . ? A HOH 1019 ? 1_555 87.2 ? 13 OE2 ? A GLU 107 ? A GLU 107 ? 1_555 CD ? C CD . ? A CD 411 ? 1_555 O ? I HOH . ? A HOH 1019 ? 1_555 82.6 ? 14 O ? I HOH . ? A HOH 1018 ? 1_555 CD ? C CD . ? A CD 411 ? 1_555 O ? I HOH . ? A HOH 1019 ? 1_555 173.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-11 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_conn_type 9 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.value' 6 4 'Structure model' '_struct_conn.conn_type_id' 7 4 'Structure model' '_struct_conn.id' 8 4 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 4 'Structure model' '_struct_conn_type.id' 23 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_phasing_MR.entry_id 2ZGD _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 26.290 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 26.290 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? other 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 CNS 1.1 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 4 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 8 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 1050 ? ? O A HOH 1066 ? ? 1.74 2 1 ND1 A HIS 69 ? ? O A HOH 1066 ? ? 2.12 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 1047 ? ? 1_555 O A HOH 1047 ? ? 6_555 1.93 2 1 O A HOH 1065 ? ? 1_555 O A HOH 1065 ? ? 6_555 2.08 3 1 O A HOH 1020 ? ? 1_555 O A HOH 1065 ? ? 6_555 2.11 4 1 OD1 A ASP 95 ? ? 1_555 CD A CD 410 ? ? 4_455 2.18 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 23 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -67.27 _pdbx_validate_torsion.psi -169.63 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 5 ? CB ? A HIS 5 CB 2 1 Y 1 A HIS 5 ? CG ? A HIS 5 CG 3 1 Y 1 A HIS 5 ? ND1 ? A HIS 5 ND1 4 1 Y 1 A HIS 5 ? CD2 ? A HIS 5 CD2 5 1 Y 1 A HIS 5 ? CE1 ? A HIS 5 CE1 6 1 Y 1 A HIS 5 ? NE2 ? A HIS 5 NE2 7 1 Y 1 A HIS 6 ? CG ? A HIS 6 CG 8 1 Y 1 A HIS 6 ? ND1 ? A HIS 6 ND1 9 1 Y 1 A HIS 6 ? CD2 ? A HIS 6 CD2 10 1 Y 1 A HIS 6 ? CE1 ? A HIS 6 CE1 11 1 Y 1 A HIS 6 ? NE2 ? A HIS 6 NE2 12 1 Y 1 A SER 22 ? OG ? A SER 22 OG 13 1 Y 1 A LYS 53 ? CE ? A LYS 53 CE 14 1 Y 1 A LYS 53 ? NZ ? A LYS 53 NZ 15 1 Y 1 A LYS 55 ? CD ? A LYS 55 CD 16 1 Y 1 A LYS 55 ? CE ? A LYS 55 CE 17 1 Y 1 A LYS 55 ? NZ ? A LYS 55 NZ 18 1 Y 1 A ASN 56 ? ND2 ? A ASN 56 ND2 19 1 Y 1 A GLU 78 ? OE1 ? A GLU 78 OE1 20 1 Y 1 A LYS 88 ? CD ? A LYS 88 CD 21 1 Y 1 A LYS 88 ? CE ? A LYS 88 CE 22 1 Y 1 A LYS 88 ? NZ ? A LYS 88 NZ 23 1 Y 1 A PHE 89 ? CD1 ? A PHE 89 CD1 24 1 Y 1 A PHE 89 ? CD2 ? A PHE 89 CD2 25 1 Y 1 A PHE 89 ? CE1 ? A PHE 89 CE1 26 1 Y 1 A PHE 89 ? CE2 ? A PHE 89 CE2 27 1 Y 1 A PHE 89 ? CZ ? A PHE 89 CZ 28 1 Y 1 A GLU 103 ? OE2 ? A GLU 103 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A HIS 4 ? A HIS 4 5 1 Y 1 A LEU 13 ? A LEU 13 6 1 Y 1 A VAL 14 ? A VAL 14 7 1 Y 1 A PRO 15 ? A PRO 15 8 1 Y 1 A ARG 16 ? A ARG 16 9 1 Y 1 A GLY 17 ? A GLY 17 10 1 Y 1 A SER 18 ? A SER 18 11 1 Y 1 A HIS 19 ? A HIS 19 12 1 Y 1 A MET 20 ? A MET 20 13 1 Y 1 A GLY 21 ? A GLY 21 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AHB N N N N 1 AHB CA C N S 2 AHB CB C N S 3 AHB OB O N N 4 AHB CG C N N 5 AHB OD1 O N N 6 AHB ND2 N N N 7 AHB C C N N 8 AHB O O N N 9 AHB OXT O N N 10 AHB H H N N 11 AHB H2 H N N 12 AHB HA H N N 13 AHB HB H N N 14 AHB HOB H N N 15 AHB HD21 H N N 16 AHB HD22 H N N 17 AHB HXT H N N 18 ALA N N N N 19 ALA CA C N S 20 ALA C C N N 21 ALA O O N N 22 ALA CB C N N 23 ALA OXT O N N 24 ALA H H N N 25 ALA H2 H N N 26 ALA HA H N N 27 ALA HB1 H N N 28 ALA HB2 H N N 29 ALA HB3 H N N 30 ALA HXT H N N 31 ARG N N N N 32 ARG CA C N S 33 ARG C C N N 34 ARG O O N N 35 ARG CB C N N 36 ARG CG C N N 37 ARG CD C N N 38 ARG NE N N N 39 ARG CZ C N N 40 ARG NH1 N N N 41 ARG NH2 N N N 42 ARG OXT O N N 43 ARG H H N N 44 ARG H2 H N N 45 ARG HA H N N 46 ARG HB2 H N N 47 ARG HB3 H N N 48 ARG HG2 H N N 49 ARG HG3 H N N 50 ARG HD2 H N N 51 ARG HD3 H N N 52 ARG HE H N N 53 ARG HH11 H N N 54 ARG HH12 H N N 55 ARG HH21 H N N 56 ARG HH22 H N N 57 ARG HXT H N N 58 ASN N N N N 59 ASN CA C N S 60 ASN C C N N 61 ASN O O N N 62 ASN CB C N N 63 ASN CG C N N 64 ASN OD1 O N N 65 ASN ND2 N N N 66 ASN OXT O N N 67 ASN H H N N 68 ASN H2 H N N 69 ASN HA H N N 70 ASN HB2 H N N 71 ASN HB3 H N N 72 ASN HD21 H N N 73 ASN HD22 H N N 74 ASN HXT H N N 75 ASP N N N N 76 ASP CA C N S 77 ASP C C N N 78 ASP O O N N 79 ASP CB C N N 80 ASP CG C N N 81 ASP OD1 O N N 82 ASP OD2 O N N 83 ASP OXT O N N 84 ASP H H N N 85 ASP H2 H N N 86 ASP HA H N N 87 ASP HB2 H N N 88 ASP HB3 H N N 89 ASP HD2 H N N 90 ASP HXT H N N 91 CD CD CD N N 92 CL CL CL N N 93 GLN N N N N 94 GLN CA C N S 95 GLN C C N N 96 GLN O O N N 97 GLN CB C N N 98 GLN CG C N N 99 GLN CD C N N 100 GLN OE1 O N N 101 GLN NE2 N N N 102 GLN OXT O N N 103 GLN H H N N 104 GLN H2 H N N 105 GLN HA H N N 106 GLN HB2 H N N 107 GLN HB3 H N N 108 GLN HG2 H N N 109 GLN HG3 H N N 110 GLN HE21 H N N 111 GLN HE22 H N N 112 GLN HXT H N N 113 GLU N N N N 114 GLU CA C N S 115 GLU C C N N 116 GLU O O N N 117 GLU CB C N N 118 GLU CG C N N 119 GLU CD C N N 120 GLU OE1 O N N 121 GLU OE2 O N N 122 GLU OXT O N N 123 GLU H H N N 124 GLU H2 H N N 125 GLU HA H N N 126 GLU HB2 H N N 127 GLU HB3 H N N 128 GLU HG2 H N N 129 GLU HG3 H N N 130 GLU HE2 H N N 131 GLU HXT H N N 132 GLY N N N N 133 GLY CA C N N 134 GLY C C N N 135 GLY O O N N 136 GLY OXT O N N 137 GLY H H N N 138 GLY H2 H N N 139 GLY HA2 H N N 140 GLY HA3 H N N 141 GLY HXT H N N 142 HIS N N N N 143 HIS CA C N S 144 HIS C C N N 145 HIS O O N N 146 HIS CB C N N 147 HIS CG C Y N 148 HIS ND1 N Y N 149 HIS CD2 C Y N 150 HIS CE1 C Y N 151 HIS NE2 N Y N 152 HIS OXT O N N 153 HIS H H N N 154 HIS H2 H N N 155 HIS HA H N N 156 HIS HB2 H N N 157 HIS HB3 H N N 158 HIS HD1 H N N 159 HIS HD2 H N N 160 HIS HE1 H N N 161 HIS HE2 H N N 162 HIS HXT H N N 163 HOH O O N N 164 HOH H1 H N N 165 HOH H2 H N N 166 ILE N N N N 167 ILE CA C N S 168 ILE C C N N 169 ILE O O N N 170 ILE CB C N S 171 ILE CG1 C N N 172 ILE CG2 C N N 173 ILE CD1 C N N 174 ILE OXT O N N 175 ILE H H N N 176 ILE H2 H N N 177 ILE HA H N N 178 ILE HB H N N 179 ILE HG12 H N N 180 ILE HG13 H N N 181 ILE HG21 H N N 182 ILE HG22 H N N 183 ILE HG23 H N N 184 ILE HD11 H N N 185 ILE HD12 H N N 186 ILE HD13 H N N 187 ILE HXT H N N 188 LEU N N N N 189 LEU CA C N S 190 LEU C C N N 191 LEU O O N N 192 LEU CB C N N 193 LEU CG C N N 194 LEU CD1 C N N 195 LEU CD2 C N N 196 LEU OXT O N N 197 LEU H H N N 198 LEU H2 H N N 199 LEU HA H N N 200 LEU HB2 H N N 201 LEU HB3 H N N 202 LEU HG H N N 203 LEU HD11 H N N 204 LEU HD12 H N N 205 LEU HD13 H N N 206 LEU HD21 H N N 207 LEU HD22 H N N 208 LEU HD23 H N N 209 LEU HXT H N N 210 LYS N N N N 211 LYS CA C N S 212 LYS C C N N 213 LYS O O N N 214 LYS CB C N N 215 LYS CG C N N 216 LYS CD C N N 217 LYS CE C N N 218 LYS NZ N N N 219 LYS OXT O N N 220 LYS H H N N 221 LYS H2 H N N 222 LYS HA H N N 223 LYS HB2 H N N 224 LYS HB3 H N N 225 LYS HG2 H N N 226 LYS HG3 H N N 227 LYS HD2 H N N 228 LYS HD3 H N N 229 LYS HE2 H N N 230 LYS HE3 H N N 231 LYS HZ1 H N N 232 LYS HZ2 H N N 233 LYS HZ3 H N N 234 LYS HXT H N N 235 MET N N N N 236 MET CA C N S 237 MET C C N N 238 MET O O N N 239 MET CB C N N 240 MET CG C N N 241 MET SD S N N 242 MET CE C N N 243 MET OXT O N N 244 MET H H N N 245 MET H2 H N N 246 MET HA H N N 247 MET HB2 H N N 248 MET HB3 H N N 249 MET HG2 H N N 250 MET HG3 H N N 251 MET HE1 H N N 252 MET HE2 H N N 253 MET HE3 H N N 254 MET HXT H N N 255 PHE N N N N 256 PHE CA C N S 257 PHE C C N N 258 PHE O O N N 259 PHE CB C N N 260 PHE CG C Y N 261 PHE CD1 C Y N 262 PHE CD2 C Y N 263 PHE CE1 C Y N 264 PHE CE2 C Y N 265 PHE CZ C Y N 266 PHE OXT O N N 267 PHE H H N N 268 PHE H2 H N N 269 PHE HA H N N 270 PHE HB2 H N N 271 PHE HB3 H N N 272 PHE HD1 H N N 273 PHE HD2 H N N 274 PHE HE1 H N N 275 PHE HE2 H N N 276 PHE HZ H N N 277 PHE HXT H N N 278 PRO N N N N 279 PRO CA C N S 280 PRO C C N N 281 PRO O O N N 282 PRO CB C N N 283 PRO CG C N N 284 PRO CD C N N 285 PRO OXT O N N 286 PRO H H N N 287 PRO HA H N N 288 PRO HB2 H N N 289 PRO HB3 H N N 290 PRO HG2 H N N 291 PRO HG3 H N N 292 PRO HD2 H N N 293 PRO HD3 H N N 294 PRO HXT H N N 295 SER N N N N 296 SER CA C N S 297 SER C C N N 298 SER O O N N 299 SER CB C N N 300 SER OG O N N 301 SER OXT O N N 302 SER H H N N 303 SER H2 H N N 304 SER HA H N N 305 SER HB2 H N N 306 SER HB3 H N N 307 SER HG H N N 308 SER HXT H N N 309 THR N N N N 310 THR CA C N S 311 THR C C N N 312 THR O O N N 313 THR CB C N R 314 THR OG1 O N N 315 THR CG2 C N N 316 THR OXT O N N 317 THR H H N N 318 THR H2 H N N 319 THR HA H N N 320 THR HB H N N 321 THR HG1 H N N 322 THR HG21 H N N 323 THR HG22 H N N 324 THR HG23 H N N 325 THR HXT H N N 326 VAL N N N N 327 VAL CA C N S 328 VAL C C N N 329 VAL O O N N 330 VAL CB C N N 331 VAL CG1 C N N 332 VAL CG2 C N N 333 VAL OXT O N N 334 VAL H H N N 335 VAL H2 H N N 336 VAL HA H N N 337 VAL HB H N N 338 VAL HG11 H N N 339 VAL HG12 H N N 340 VAL HG13 H N N 341 VAL HG21 H N N 342 VAL HG22 H N N 343 VAL HG23 H N N 344 VAL HXT H N N 345 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AHB N CA sing N N 1 AHB N H sing N N 2 AHB N H2 sing N N 3 AHB CA CB sing N N 4 AHB CA C sing N N 5 AHB CA HA sing N N 6 AHB CB OB sing N N 7 AHB CB CG sing N N 8 AHB CB HB sing N N 9 AHB OB HOB sing N N 10 AHB CG OD1 doub N N 11 AHB CG ND2 sing N N 12 AHB ND2 HD21 sing N N 13 AHB ND2 HD22 sing N N 14 AHB C O doub N N 15 AHB C OXT sing N N 16 AHB OXT HXT sing N N 17 ALA N CA sing N N 18 ALA N H sing N N 19 ALA N H2 sing N N 20 ALA CA C sing N N 21 ALA CA CB sing N N 22 ALA CA HA sing N N 23 ALA C O doub N N 24 ALA C OXT sing N N 25 ALA CB HB1 sing N N 26 ALA CB HB2 sing N N 27 ALA CB HB3 sing N N 28 ALA OXT HXT sing N N 29 ARG N CA sing N N 30 ARG N H sing N N 31 ARG N H2 sing N N 32 ARG CA C sing N N 33 ARG CA CB sing N N 34 ARG CA HA sing N N 35 ARG C O doub N N 36 ARG C OXT sing N N 37 ARG CB CG sing N N 38 ARG CB HB2 sing N N 39 ARG CB HB3 sing N N 40 ARG CG CD sing N N 41 ARG CG HG2 sing N N 42 ARG CG HG3 sing N N 43 ARG CD NE sing N N 44 ARG CD HD2 sing N N 45 ARG CD HD3 sing N N 46 ARG NE CZ sing N N 47 ARG NE HE sing N N 48 ARG CZ NH1 sing N N 49 ARG CZ NH2 doub N N 50 ARG NH1 HH11 sing N N 51 ARG NH1 HH12 sing N N 52 ARG NH2 HH21 sing N N 53 ARG NH2 HH22 sing N N 54 ARG OXT HXT sing N N 55 ASN N CA sing N N 56 ASN N H sing N N 57 ASN N H2 sing N N 58 ASN CA C sing N N 59 ASN CA CB sing N N 60 ASN CA HA sing N N 61 ASN C O doub N N 62 ASN C OXT sing N N 63 ASN CB CG sing N N 64 ASN CB HB2 sing N N 65 ASN CB HB3 sing N N 66 ASN CG OD1 doub N N 67 ASN CG ND2 sing N N 68 ASN ND2 HD21 sing N N 69 ASN ND2 HD22 sing N N 70 ASN OXT HXT sing N N 71 ASP N CA sing N N 72 ASP N H sing N N 73 ASP N H2 sing N N 74 ASP CA C sing N N 75 ASP CA CB sing N N 76 ASP CA HA sing N N 77 ASP C O doub N N 78 ASP C OXT sing N N 79 ASP CB CG sing N N 80 ASP CB HB2 sing N N 81 ASP CB HB3 sing N N 82 ASP CG OD1 doub N N 83 ASP CG OD2 sing N N 84 ASP OD2 HD2 sing N N 85 ASP OXT HXT sing N N 86 GLN N CA sing N N 87 GLN N H sing N N 88 GLN N H2 sing N N 89 GLN CA C sing N N 90 GLN CA CB sing N N 91 GLN CA HA sing N N 92 GLN C O doub N N 93 GLN C OXT sing N N 94 GLN CB CG sing N N 95 GLN CB HB2 sing N N 96 GLN CB HB3 sing N N 97 GLN CG CD sing N N 98 GLN CG HG2 sing N N 99 GLN CG HG3 sing N N 100 GLN CD OE1 doub N N 101 GLN CD NE2 sing N N 102 GLN NE2 HE21 sing N N 103 GLN NE2 HE22 sing N N 104 GLN OXT HXT sing N N 105 GLU N CA sing N N 106 GLU N H sing N N 107 GLU N H2 sing N N 108 GLU CA C sing N N 109 GLU CA CB sing N N 110 GLU CA HA sing N N 111 GLU C O doub N N 112 GLU C OXT sing N N 113 GLU CB CG sing N N 114 GLU CB HB2 sing N N 115 GLU CB HB3 sing N N 116 GLU CG CD sing N N 117 GLU CG HG2 sing N N 118 GLU CG HG3 sing N N 119 GLU CD OE1 doub N N 120 GLU CD OE2 sing N N 121 GLU OE2 HE2 sing N N 122 GLU OXT HXT sing N N 123 GLY N CA sing N N 124 GLY N H sing N N 125 GLY N H2 sing N N 126 GLY CA C sing N N 127 GLY CA HA2 sing N N 128 GLY CA HA3 sing N N 129 GLY C O doub N N 130 GLY C OXT sing N N 131 GLY OXT HXT sing N N 132 HIS N CA sing N N 133 HIS N H sing N N 134 HIS N H2 sing N N 135 HIS CA C sing N N 136 HIS CA CB sing N N 137 HIS CA HA sing N N 138 HIS C O doub N N 139 HIS C OXT sing N N 140 HIS CB CG sing N N 141 HIS CB HB2 sing N N 142 HIS CB HB3 sing N N 143 HIS CG ND1 sing Y N 144 HIS CG CD2 doub Y N 145 HIS ND1 CE1 doub Y N 146 HIS ND1 HD1 sing N N 147 HIS CD2 NE2 sing Y N 148 HIS CD2 HD2 sing N N 149 HIS CE1 NE2 sing Y N 150 HIS CE1 HE1 sing N N 151 HIS NE2 HE2 sing N N 152 HIS OXT HXT sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 ILE N CA sing N N 156 ILE N H sing N N 157 ILE N H2 sing N N 158 ILE CA C sing N N 159 ILE CA CB sing N N 160 ILE CA HA sing N N 161 ILE C O doub N N 162 ILE C OXT sing N N 163 ILE CB CG1 sing N N 164 ILE CB CG2 sing N N 165 ILE CB HB sing N N 166 ILE CG1 CD1 sing N N 167 ILE CG1 HG12 sing N N 168 ILE CG1 HG13 sing N N 169 ILE CG2 HG21 sing N N 170 ILE CG2 HG22 sing N N 171 ILE CG2 HG23 sing N N 172 ILE CD1 HD11 sing N N 173 ILE CD1 HD12 sing N N 174 ILE CD1 HD13 sing N N 175 ILE OXT HXT sing N N 176 LEU N CA sing N N 177 LEU N H sing N N 178 LEU N H2 sing N N 179 LEU CA C sing N N 180 LEU CA CB sing N N 181 LEU CA HA sing N N 182 LEU C O doub N N 183 LEU C OXT sing N N 184 LEU CB CG sing N N 185 LEU CB HB2 sing N N 186 LEU CB HB3 sing N N 187 LEU CG CD1 sing N N 188 LEU CG CD2 sing N N 189 LEU CG HG sing N N 190 LEU CD1 HD11 sing N N 191 LEU CD1 HD12 sing N N 192 LEU CD1 HD13 sing N N 193 LEU CD2 HD21 sing N N 194 LEU CD2 HD22 sing N N 195 LEU CD2 HD23 sing N N 196 LEU OXT HXT sing N N 197 LYS N CA sing N N 198 LYS N H sing N N 199 LYS N H2 sing N N 200 LYS CA C sing N N 201 LYS CA CB sing N N 202 LYS CA HA sing N N 203 LYS C O doub N N 204 LYS C OXT sing N N 205 LYS CB CG sing N N 206 LYS CB HB2 sing N N 207 LYS CB HB3 sing N N 208 LYS CG CD sing N N 209 LYS CG HG2 sing N N 210 LYS CG HG3 sing N N 211 LYS CD CE sing N N 212 LYS CD HD2 sing N N 213 LYS CD HD3 sing N N 214 LYS CE NZ sing N N 215 LYS CE HE2 sing N N 216 LYS CE HE3 sing N N 217 LYS NZ HZ1 sing N N 218 LYS NZ HZ2 sing N N 219 LYS NZ HZ3 sing N N 220 LYS OXT HXT sing N N 221 MET N CA sing N N 222 MET N H sing N N 223 MET N H2 sing N N 224 MET CA C sing N N 225 MET CA CB sing N N 226 MET CA HA sing N N 227 MET C O doub N N 228 MET C OXT sing N N 229 MET CB CG sing N N 230 MET CB HB2 sing N N 231 MET CB HB3 sing N N 232 MET CG SD sing N N 233 MET CG HG2 sing N N 234 MET CG HG3 sing N N 235 MET SD CE sing N N 236 MET CE HE1 sing N N 237 MET CE HE2 sing N N 238 MET CE HE3 sing N N 239 MET OXT HXT sing N N 240 PHE N CA sing N N 241 PHE N H sing N N 242 PHE N H2 sing N N 243 PHE CA C sing N N 244 PHE CA CB sing N N 245 PHE CA HA sing N N 246 PHE C O doub N N 247 PHE C OXT sing N N 248 PHE CB CG sing N N 249 PHE CB HB2 sing N N 250 PHE CB HB3 sing N N 251 PHE CG CD1 doub Y N 252 PHE CG CD2 sing Y N 253 PHE CD1 CE1 sing Y N 254 PHE CD1 HD1 sing N N 255 PHE CD2 CE2 doub Y N 256 PHE CD2 HD2 sing N N 257 PHE CE1 CZ doub Y N 258 PHE CE1 HE1 sing N N 259 PHE CE2 CZ sing Y N 260 PHE CE2 HE2 sing N N 261 PHE CZ HZ sing N N 262 PHE OXT HXT sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SER N CA sing N N 281 SER N H sing N N 282 SER N H2 sing N N 283 SER CA C sing N N 284 SER CA CB sing N N 285 SER CA HA sing N N 286 SER C O doub N N 287 SER C OXT sing N N 288 SER CB OG sing N N 289 SER CB HB2 sing N N 290 SER CB HB3 sing N N 291 SER OG HG sing N N 292 SER OXT HXT sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 VAL N CA sing N N 310 VAL N H sing N N 311 VAL N H2 sing N N 312 VAL CA C sing N N 313 VAL CA CB sing N N 314 VAL CA HA sing N N 315 VAL C O doub N N 316 VAL C OXT sing N N 317 VAL CB CG1 sing N N 318 VAL CB CG2 sing N N 319 VAL CB HB sing N N 320 VAL CG1 HG11 sing N N 321 VAL CG1 HG12 sing N N 322 VAL CG1 HG13 sing N N 323 VAL CG2 HG21 sing N N 324 VAL CG2 HG22 sing N N 325 VAL CG2 HG23 sing N N 326 VAL OXT HXT sing N N 327 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1N0Q _pdbx_initial_refinement_model.details 'PDB ENTRY 1N0Q' #