data_2ZIY # _entry.id 2ZIY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZIY pdb_00002ziy 10.2210/pdb2ziy/pdb RCSB RCSB028030 ? ? WWPDB D_1000028030 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZIY _pdbx_database_status.recvd_initial_deposition_date 2008-02-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miyano, M.' 1 'Shimamura, T.' 2 # _citation.id primary _citation.title 'Crystal structure of squid rhodopsin with intracellularly extended cytoplasmic region' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 283 _citation.page_first 17753 _citation.page_last 17756 _citation.year 2008 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18463093 _citation.pdbx_database_id_DOI 10.1074/jbc.C800040200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shimamura, T.' 1 ? primary 'Hiraki, K.' 2 ? primary 'Takahashi, N.' 3 ? primary 'Hori, T.' 4 ? primary 'Ago, H.' 5 ? primary 'Masuda, K.' 6 ? primary 'Takio, K.' 7 ? primary 'Ishiguro, M.' 8 ? primary 'Miyano, M.' 9 ? # _cell.entry_id 2ZIY _cell.length_a 84.319 _cell.length_b 108.746 _cell.length_c 142.165 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZIY _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Rhodopsin 41828.742 1 ? ? 'Truncation of C-terminal polypro by V8-protease, UNP residues 2-373:VAL18ILE confirmed by MS' ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 'PALMITIC ACID' 256.424 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GRDLRDNETWWYNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDF TFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWL WSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRL NAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPK FREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGESSDAAPSADAAQMKE ; _entity_poly.pdbx_seq_one_letter_code_can ;GRDLRDNETWWYNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDF TFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWL WSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRL NAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPK FREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGESSDAAPSADAAQMKE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ARG n 1 3 ASP n 1 4 LEU n 1 5 ARG n 1 6 ASP n 1 7 ASN n 1 8 GLU n 1 9 THR n 1 10 TRP n 1 11 TRP n 1 12 TYR n 1 13 ASN n 1 14 PRO n 1 15 SER n 1 16 ILE n 1 17 ILE n 1 18 VAL n 1 19 HIS n 1 20 PRO n 1 21 HIS n 1 22 TRP n 1 23 ARG n 1 24 GLU n 1 25 PHE n 1 26 ASP n 1 27 GLN n 1 28 VAL n 1 29 PRO n 1 30 ASP n 1 31 ALA n 1 32 VAL n 1 33 TYR n 1 34 TYR n 1 35 SER n 1 36 LEU n 1 37 GLY n 1 38 ILE n 1 39 PHE n 1 40 ILE n 1 41 GLY n 1 42 ILE n 1 43 CYS n 1 44 GLY n 1 45 ILE n 1 46 ILE n 1 47 GLY n 1 48 CYS n 1 49 GLY n 1 50 GLY n 1 51 ASN n 1 52 GLY n 1 53 ILE n 1 54 VAL n 1 55 ILE n 1 56 TYR n 1 57 LEU n 1 58 PHE n 1 59 THR n 1 60 LYS n 1 61 THR n 1 62 LYS n 1 63 SER n 1 64 LEU n 1 65 GLN n 1 66 THR n 1 67 PRO n 1 68 ALA n 1 69 ASN n 1 70 MET n 1 71 PHE n 1 72 ILE n 1 73 ILE n 1 74 ASN n 1 75 LEU n 1 76 ALA n 1 77 PHE n 1 78 SER n 1 79 ASP n 1 80 PHE n 1 81 THR n 1 82 PHE n 1 83 SER n 1 84 LEU n 1 85 VAL n 1 86 ASN n 1 87 GLY n 1 88 PHE n 1 89 PRO n 1 90 LEU n 1 91 MET n 1 92 THR n 1 93 ILE n 1 94 SER n 1 95 CYS n 1 96 PHE n 1 97 LEU n 1 98 LYS n 1 99 LYS n 1 100 TRP n 1 101 ILE n 1 102 PHE n 1 103 GLY n 1 104 PHE n 1 105 ALA n 1 106 ALA n 1 107 CYS n 1 108 LYS n 1 109 VAL n 1 110 TYR n 1 111 GLY n 1 112 PHE n 1 113 ILE n 1 114 GLY n 1 115 GLY n 1 116 ILE n 1 117 PHE n 1 118 GLY n 1 119 PHE n 1 120 MET n 1 121 SER n 1 122 ILE n 1 123 MET n 1 124 THR n 1 125 MET n 1 126 ALA n 1 127 MET n 1 128 ILE n 1 129 SER n 1 130 ILE n 1 131 ASP n 1 132 ARG n 1 133 TYR n 1 134 ASN n 1 135 VAL n 1 136 ILE n 1 137 GLY n 1 138 ARG n 1 139 PRO n 1 140 MET n 1 141 ALA n 1 142 ALA n 1 143 SER n 1 144 LYS n 1 145 LYS n 1 146 MET n 1 147 SER n 1 148 HIS n 1 149 ARG n 1 150 ARG n 1 151 ALA n 1 152 PHE n 1 153 ILE n 1 154 MET n 1 155 ILE n 1 156 ILE n 1 157 PHE n 1 158 VAL n 1 159 TRP n 1 160 LEU n 1 161 TRP n 1 162 SER n 1 163 VAL n 1 164 LEU n 1 165 TRP n 1 166 ALA n 1 167 ILE n 1 168 GLY n 1 169 PRO n 1 170 ILE n 1 171 PHE n 1 172 GLY n 1 173 TRP n 1 174 GLY n 1 175 ALA n 1 176 TYR n 1 177 THR n 1 178 LEU n 1 179 GLU n 1 180 GLY n 1 181 VAL n 1 182 LEU n 1 183 CYS n 1 184 ASN n 1 185 CYS n 1 186 SER n 1 187 PHE n 1 188 ASP n 1 189 TYR n 1 190 ILE n 1 191 SER n 1 192 ARG n 1 193 ASP n 1 194 SER n 1 195 THR n 1 196 THR n 1 197 ARG n 1 198 SER n 1 199 ASN n 1 200 ILE n 1 201 LEU n 1 202 CYS n 1 203 MET n 1 204 PHE n 1 205 ILE n 1 206 LEU n 1 207 GLY n 1 208 PHE n 1 209 PHE n 1 210 GLY n 1 211 PRO n 1 212 ILE n 1 213 LEU n 1 214 ILE n 1 215 ILE n 1 216 PHE n 1 217 PHE n 1 218 CYS n 1 219 TYR n 1 220 PHE n 1 221 ASN n 1 222 ILE n 1 223 VAL n 1 224 MET n 1 225 SER n 1 226 VAL n 1 227 SER n 1 228 ASN n 1 229 HIS n 1 230 GLU n 1 231 LYS n 1 232 GLU n 1 233 MET n 1 234 ALA n 1 235 ALA n 1 236 MET n 1 237 ALA n 1 238 LYS n 1 239 ARG n 1 240 LEU n 1 241 ASN n 1 242 ALA n 1 243 LYS n 1 244 GLU n 1 245 LEU n 1 246 ARG n 1 247 LYS n 1 248 ALA n 1 249 GLN n 1 250 ALA n 1 251 GLY n 1 252 ALA n 1 253 ASN n 1 254 ALA n 1 255 GLU n 1 256 MET n 1 257 ARG n 1 258 LEU n 1 259 ALA n 1 260 LYS n 1 261 ILE n 1 262 SER n 1 263 ILE n 1 264 VAL n 1 265 ILE n 1 266 VAL n 1 267 SER n 1 268 GLN n 1 269 PHE n 1 270 LEU n 1 271 LEU n 1 272 SER n 1 273 TRP n 1 274 SER n 1 275 PRO n 1 276 TYR n 1 277 ALA n 1 278 VAL n 1 279 VAL n 1 280 ALA n 1 281 LEU n 1 282 LEU n 1 283 ALA n 1 284 GLN n 1 285 PHE n 1 286 GLY n 1 287 PRO n 1 288 LEU n 1 289 GLU n 1 290 TRP n 1 291 VAL n 1 292 THR n 1 293 PRO n 1 294 TYR n 1 295 ALA n 1 296 ALA n 1 297 GLN n 1 298 LEU n 1 299 PRO n 1 300 VAL n 1 301 MET n 1 302 PHE n 1 303 ALA n 1 304 LYS n 1 305 ALA n 1 306 SER n 1 307 ALA n 1 308 ILE n 1 309 HIS n 1 310 ASN n 1 311 PRO n 1 312 MET n 1 313 ILE n 1 314 TYR n 1 315 SER n 1 316 VAL n 1 317 SER n 1 318 HIS n 1 319 PRO n 1 320 LYS n 1 321 PHE n 1 322 ARG n 1 323 GLU n 1 324 ALA n 1 325 ILE n 1 326 SER n 1 327 GLN n 1 328 THR n 1 329 PHE n 1 330 PRO n 1 331 TRP n 1 332 VAL n 1 333 LEU n 1 334 THR n 1 335 CYS n 1 336 CYS n 1 337 GLN n 1 338 PHE n 1 339 ASP n 1 340 ASP n 1 341 LYS n 1 342 GLU n 1 343 THR n 1 344 GLU n 1 345 ASP n 1 346 ASP n 1 347 LYS n 1 348 ASP n 1 349 ALA n 1 350 GLU n 1 351 THR n 1 352 GLU n 1 353 ILE n 1 354 PRO n 1 355 ALA n 1 356 GLY n 1 357 GLU n 1 358 SER n 1 359 SER n 1 360 ASP n 1 361 ALA n 1 362 ALA n 1 363 PRO n 1 364 SER n 1 365 ALA n 1 366 ASP n 1 367 ALA n 1 368 ALA n 1 369 GLN n 1 370 MET n 1 371 LYS n 1 372 GLU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'Japanese flying squid' _entity_src_nat.pdbx_organism_scientific 'Todarodes pacificus' _entity_src_nat.pdbx_ncbi_taxonomy_id ? _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code OPSD_TODPA _struct_ref.pdbx_db_accession P31356 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GRDLRDNETWWYNPSIVVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDF TFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWL WSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRL NAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPK FREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGESSDAAPSADAAQMKE ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2ZIY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 372 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P31356 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 373 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 373 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2ZIY _struct_ref_seq_dif.mon_id ILE _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 17 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P31356 _struct_ref_seq_dif.db_mon_id VAL _struct_ref_seq_dif.pdbx_seq_db_seq_num 18 _struct_ref_seq_dif.details 'SEE REMARK 999' _struct_ref_seq_dif.pdbx_auth_seq_num 18 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZIY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.90 _exptl_crystal.density_percent_sol 68.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '28% PEG400, 0.1M HEPES, 8% ethylene glycol, pH7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2006-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97950 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL45XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL45XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97950 # _reflns.entry_id 2ZIY _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 3.7 _reflns.d_resolution_low 43.2 _reflns.number_all 6680 _reflns.number_obs 6680 _reflns.percent_possible_obs 93.3 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.7 _reflns_shell.d_res_low 3.83 _reflns_shell.percent_possible_all 74.3 _reflns_shell.Rmerge_I_obs 0.775 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 535 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2ZIY _refine.ls_d_res_high 3.7 _refine.ls_d_res_low 43.2 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6647 _refine.ls_number_reflns_R_free 725 _refine.ls_percent_reflns_obs 93.3 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.302 _refine.ls_R_factor_R_free 0.330 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1GZM' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details 'The structure was refined also with REFMAC 5.0' _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2926 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2980 _refine_hist.d_res_high 3.7 _refine_hist.d_res_low 43.2 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.016981 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.67163 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 3.7 _refine_ls_shell.d_res_low 3.87 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.4141 _refine_ls_shell.percent_reflns_obs 74.3 _refine_ls_shell.R_factor_R_free 0.4320 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 572 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ZIY _struct.title 'Crystal structure of squid rhodopsin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZIY _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;transmembrane helices, Chromophore, G-protein coupled receptor, Glycoprotein, Lipoprotein, Palmitate, Phosphoprotein, Photoreceptor protein, Receptor, Retinal protein, Sensory transduction, Transducer, Vision, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 19 ? GLU A 24 ? HIS A 20 GLU A 25 1 ? 6 HELX_P HELX_P2 2 PRO A 29 ? THR A 61 ? PRO A 30 THR A 62 1 ? 33 HELX_P HELX_P3 3 LYS A 62 ? GLN A 65 ? LYS A 63 GLN A 66 5 ? 4 HELX_P HELX_P4 4 THR A 66 ? ALA A 68 ? THR A 67 ALA A 69 5 ? 3 HELX_P HELX_P5 5 ASN A 69 ? GLY A 87 ? ASN A 70 GLY A 88 1 ? 19 HELX_P HELX_P6 6 PRO A 89 ? LEU A 97 ? PRO A 90 LEU A 98 1 ? 9 HELX_P HELX_P7 7 GLY A 103 ? ILE A 136 ? GLY A 104 ILE A 137 1 ? 34 HELX_P HELX_P8 8 PRO A 139 ? SER A 143 ? PRO A 140 SER A 144 5 ? 5 HELX_P HELX_P9 9 SER A 147 ? GLY A 168 ? SER A 148 GLY A 169 1 ? 22 HELX_P HELX_P10 10 PRO A 169 ? GLY A 172 ? PRO A 170 GLY A 173 5 ? 4 HELX_P HELX_P11 11 ASP A 193 ? GLY A 207 ? ASP A 194 GLY A 208 1 ? 15 HELX_P HELX_P12 12 PHE A 208 ? ASN A 228 ? PHE A 209 ASN A 229 1 ? 21 HELX_P HELX_P13 13 ASN A 228 ? MET A 236 ? ASN A 229 MET A 237 1 ? 9 HELX_P HELX_P14 14 LYS A 243 ? GLY A 286 ? LYS A 244 GLY A 287 1 ? 44 HELX_P HELX_P15 15 THR A 292 ? SER A 306 ? THR A 293 SER A 307 1 ? 15 HELX_P HELX_P16 16 ILE A 308 ? SER A 315 ? ILE A 309 SER A 316 1 ? 8 HELX_P HELX_P17 17 HIS A 318 ? PHE A 329 ? HIS A 319 PHE A 330 1 ? 12 HELX_P HELX_P18 18 PRO A 330 ? CYS A 336 ? PRO A 331 CYS A 337 5 ? 7 HELX_P HELX_P19 19 GLU A 342 ? ASP A 348 ? GLU A 343 ASP A 349 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 107 SG ? ? ? 1_555 A CYS 185 SG ? ? A CYS 108 A CYS 186 1_555 ? ? ? ? ? ? ? 2.041 ? ? covale1 covale one ? A LYS 304 NZ ? ? ? 1_555 B RET . C15 ? ? A LYS 305 A RET 380 1_555 ? ? ? ? ? ? ? 1.301 ? ? covale2 covale one ? A CYS 335 SG ? ? ? 1_555 C PLM . C1 ? ? A CYS 336 A PLM 381 1_555 ? ? ? ? ? ? ? 1.863 ? ? covale3 covale one ? A CYS 336 SG ? ? ? 1_555 D PLM . C1 ? ? A CYS 337 A PLM 382 1_555 ? ? ? ? ? ? ? 1.860 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 88 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 89 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 89 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 90 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.48 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 176 ? LEU A 178 ? TYR A 177 LEU A 179 A 2 CYS A 185 ? PHE A 187 ? CYS A 186 PHE A 188 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 177 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 178 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id SER _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 186 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id SER _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 187 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A RET 380 ? 6 'BINDING SITE FOR RESIDUE RET A 380' AC2 Software A PLM 381 ? 1 'BINDING SITE FOR RESIDUE PLM A 381' AC3 Software A PLM 382 ? 3 'BINDING SITE FOR RESIDUE PLM A 382' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 PHE A 119 ? PHE A 120 . ? 1_555 ? 2 AC1 6 CYS A 185 ? CYS A 186 . ? 1_555 ? 3 AC1 6 MET A 203 ? MET A 204 . ? 1_555 ? 4 AC1 6 PHE A 208 ? PHE A 209 . ? 1_555 ? 5 AC1 6 TRP A 273 ? TRP A 274 . ? 1_555 ? 6 AC1 6 LYS A 304 ? LYS A 305 . ? 1_555 ? 7 AC2 1 CYS A 335 ? CYS A 336 . ? 1_555 ? 8 AC3 3 SER A 315 ? SER A 316 . ? 1_555 ? 9 AC3 3 CYS A 335 ? CYS A 336 . ? 1_555 ? 10 AC3 3 CYS A 336 ? CYS A 337 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZIY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZIY _atom_sites.fract_transf_matrix[1][1] 0.011860 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009196 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007034 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2 ? ? ? A . n A 1 2 ARG 2 3 ? ? ? A . n A 1 3 ASP 3 4 4 ASP ASP A . n A 1 4 LEU 4 5 5 LEU LEU A . n A 1 5 ARG 5 6 6 ARG ARG A . n A 1 6 ASP 6 7 7 ASP ASP A . n A 1 7 ASN 7 8 8 ASN ASN A . n A 1 8 GLU 8 9 9 GLU GLU A . n A 1 9 THR 9 10 10 THR THR A . n A 1 10 TRP 10 11 11 TRP TRP A . n A 1 11 TRP 11 12 12 TRP TRP A . n A 1 12 TYR 12 13 13 TYR TYR A . n A 1 13 ASN 13 14 14 ASN ASN A . n A 1 14 PRO 14 15 15 PRO PRO A . n A 1 15 SER 15 16 16 SER SER A . n A 1 16 ILE 16 17 17 ILE ILE A . n A 1 17 ILE 17 18 18 ILE ILE A . n A 1 18 VAL 18 19 19 VAL VAL A . n A 1 19 HIS 19 20 20 HIS HIS A . n A 1 20 PRO 20 21 21 PRO PRO A . n A 1 21 HIS 21 22 22 HIS HIS A . n A 1 22 TRP 22 23 23 TRP TRP A . n A 1 23 ARG 23 24 24 ARG ARG A . n A 1 24 GLU 24 25 25 GLU GLU A . n A 1 25 PHE 25 26 26 PHE PHE A . n A 1 26 ASP 26 27 27 ASP ASP A . n A 1 27 GLN 27 28 28 GLN GLN A . n A 1 28 VAL 28 29 29 VAL VAL A . n A 1 29 PRO 29 30 30 PRO PRO A . n A 1 30 ASP 30 31 31 ASP ASP A . n A 1 31 ALA 31 32 32 ALA ALA A . n A 1 32 VAL 32 33 33 VAL VAL A . n A 1 33 TYR 33 34 34 TYR TYR A . n A 1 34 TYR 34 35 35 TYR TYR A . n A 1 35 SER 35 36 36 SER SER A . n A 1 36 LEU 36 37 37 LEU LEU A . n A 1 37 GLY 37 38 38 GLY GLY A . n A 1 38 ILE 38 39 39 ILE ILE A . n A 1 39 PHE 39 40 40 PHE PHE A . n A 1 40 ILE 40 41 41 ILE ILE A . n A 1 41 GLY 41 42 42 GLY GLY A . n A 1 42 ILE 42 43 43 ILE ILE A . n A 1 43 CYS 43 44 44 CYS CYS A . n A 1 44 GLY 44 45 45 GLY GLY A . n A 1 45 ILE 45 46 46 ILE ILE A . n A 1 46 ILE 46 47 47 ILE ILE A . n A 1 47 GLY 47 48 48 GLY GLY A . n A 1 48 CYS 48 49 49 CYS CYS A . n A 1 49 GLY 49 50 50 GLY GLY A . n A 1 50 GLY 50 51 51 GLY GLY A . n A 1 51 ASN 51 52 52 ASN ASN A . n A 1 52 GLY 52 53 53 GLY GLY A . n A 1 53 ILE 53 54 54 ILE ILE A . n A 1 54 VAL 54 55 55 VAL VAL A . n A 1 55 ILE 55 56 56 ILE ILE A . n A 1 56 TYR 56 57 57 TYR TYR A . n A 1 57 LEU 57 58 58 LEU LEU A . n A 1 58 PHE 58 59 59 PHE PHE A . n A 1 59 THR 59 60 60 THR THR A . n A 1 60 LYS 60 61 61 LYS LYS A . n A 1 61 THR 61 62 62 THR THR A . n A 1 62 LYS 62 63 63 LYS LYS A . n A 1 63 SER 63 64 64 SER SER A . n A 1 64 LEU 64 65 65 LEU LEU A . n A 1 65 GLN 65 66 66 GLN GLN A . n A 1 66 THR 66 67 67 THR THR A . n A 1 67 PRO 67 68 68 PRO PRO A . n A 1 68 ALA 68 69 69 ALA ALA A . n A 1 69 ASN 69 70 70 ASN ASN A . n A 1 70 MET 70 71 71 MET MET A . n A 1 71 PHE 71 72 72 PHE PHE A . n A 1 72 ILE 72 73 73 ILE ILE A . n A 1 73 ILE 73 74 74 ILE ILE A . n A 1 74 ASN 74 75 75 ASN ASN A . n A 1 75 LEU 75 76 76 LEU LEU A . n A 1 76 ALA 76 77 77 ALA ALA A . n A 1 77 PHE 77 78 78 PHE PHE A . n A 1 78 SER 78 79 79 SER SER A . n A 1 79 ASP 79 80 80 ASP ASP A . n A 1 80 PHE 80 81 81 PHE PHE A . n A 1 81 THR 81 82 82 THR THR A . n A 1 82 PHE 82 83 83 PHE PHE A . n A 1 83 SER 83 84 84 SER SER A . n A 1 84 LEU 84 85 85 LEU LEU A . n A 1 85 VAL 85 86 86 VAL VAL A . n A 1 86 ASN 86 87 87 ASN ASN A . n A 1 87 GLY 87 88 88 GLY GLY A . n A 1 88 PHE 88 89 89 PHE PHE A . n A 1 89 PRO 89 90 90 PRO PRO A . n A 1 90 LEU 90 91 91 LEU LEU A . n A 1 91 MET 91 92 92 MET MET A . n A 1 92 THR 92 93 93 THR THR A . n A 1 93 ILE 93 94 94 ILE ILE A . n A 1 94 SER 94 95 95 SER SER A . n A 1 95 CYS 95 96 96 CYS CYS A . n A 1 96 PHE 96 97 97 PHE PHE A . n A 1 97 LEU 97 98 98 LEU LEU A . n A 1 98 LYS 98 99 99 LYS LYS A . n A 1 99 LYS 99 100 100 LYS LYS A . n A 1 100 TRP 100 101 101 TRP TRP A . n A 1 101 ILE 101 102 102 ILE ILE A . n A 1 102 PHE 102 103 103 PHE PHE A . n A 1 103 GLY 103 104 104 GLY GLY A . n A 1 104 PHE 104 105 105 PHE PHE A . n A 1 105 ALA 105 106 106 ALA ALA A . n A 1 106 ALA 106 107 107 ALA ALA A . n A 1 107 CYS 107 108 108 CYS CYS A . n A 1 108 LYS 108 109 109 LYS LYS A . n A 1 109 VAL 109 110 110 VAL VAL A . n A 1 110 TYR 110 111 111 TYR TYR A . n A 1 111 GLY 111 112 112 GLY GLY A . n A 1 112 PHE 112 113 113 PHE PHE A . n A 1 113 ILE 113 114 114 ILE ILE A . n A 1 114 GLY 114 115 115 GLY GLY A . n A 1 115 GLY 115 116 116 GLY GLY A . n A 1 116 ILE 116 117 117 ILE ILE A . n A 1 117 PHE 117 118 118 PHE PHE A . n A 1 118 GLY 118 119 119 GLY GLY A . n A 1 119 PHE 119 120 120 PHE PHE A . n A 1 120 MET 120 121 121 MET MET A . n A 1 121 SER 121 122 122 SER SER A . n A 1 122 ILE 122 123 123 ILE ILE A . n A 1 123 MET 123 124 124 MET MET A . n A 1 124 THR 124 125 125 THR THR A . n A 1 125 MET 125 126 126 MET MET A . n A 1 126 ALA 126 127 127 ALA ALA A . n A 1 127 MET 127 128 128 MET MET A . n A 1 128 ILE 128 129 129 ILE ILE A . n A 1 129 SER 129 130 130 SER SER A . n A 1 130 ILE 130 131 131 ILE ILE A . n A 1 131 ASP 131 132 132 ASP ASP A . n A 1 132 ARG 132 133 133 ARG ARG A . n A 1 133 TYR 133 134 134 TYR TYR A . n A 1 134 ASN 134 135 135 ASN ASN A . n A 1 135 VAL 135 136 136 VAL VAL A . n A 1 136 ILE 136 137 137 ILE ILE A . n A 1 137 GLY 137 138 138 GLY GLY A . n A 1 138 ARG 138 139 139 ARG ARG A . n A 1 139 PRO 139 140 140 PRO PRO A . n A 1 140 MET 140 141 141 MET MET A . n A 1 141 ALA 141 142 142 ALA ALA A . n A 1 142 ALA 142 143 143 ALA ALA A . n A 1 143 SER 143 144 144 SER SER A . n A 1 144 LYS 144 145 145 LYS LYS A . n A 1 145 LYS 145 146 146 LYS LYS A . n A 1 146 MET 146 147 147 MET MET A . n A 1 147 SER 147 148 148 SER SER A . n A 1 148 HIS 148 149 149 HIS HIS A . n A 1 149 ARG 149 150 150 ARG ARG A . n A 1 150 ARG 150 151 151 ARG ARG A . n A 1 151 ALA 151 152 152 ALA ALA A . n A 1 152 PHE 152 153 153 PHE PHE A . n A 1 153 ILE 153 154 154 ILE ILE A . n A 1 154 MET 154 155 155 MET MET A . n A 1 155 ILE 155 156 156 ILE ILE A . n A 1 156 ILE 156 157 157 ILE ILE A . n A 1 157 PHE 157 158 158 PHE PHE A . n A 1 158 VAL 158 159 159 VAL VAL A . n A 1 159 TRP 159 160 160 TRP TRP A . n A 1 160 LEU 160 161 161 LEU LEU A . n A 1 161 TRP 161 162 162 TRP TRP A . n A 1 162 SER 162 163 163 SER SER A . n A 1 163 VAL 163 164 164 VAL VAL A . n A 1 164 LEU 164 165 165 LEU LEU A . n A 1 165 TRP 165 166 166 TRP TRP A . n A 1 166 ALA 166 167 167 ALA ALA A . n A 1 167 ILE 167 168 168 ILE ILE A . n A 1 168 GLY 168 169 169 GLY GLY A . n A 1 169 PRO 169 170 170 PRO PRO A . n A 1 170 ILE 170 171 171 ILE ILE A . n A 1 171 PHE 171 172 172 PHE PHE A . n A 1 172 GLY 172 173 173 GLY GLY A . n A 1 173 TRP 173 174 174 TRP TRP A . n A 1 174 GLY 174 175 175 GLY GLY A . n A 1 175 ALA 175 176 176 ALA ALA A . n A 1 176 TYR 176 177 177 TYR TYR A . n A 1 177 THR 177 178 178 THR THR A . n A 1 178 LEU 178 179 179 LEU LEU A . n A 1 179 GLU 179 180 180 GLU GLU A . n A 1 180 GLY 180 181 181 GLY GLY A . n A 1 181 VAL 181 182 182 VAL VAL A . n A 1 182 LEU 182 183 183 LEU LEU A . n A 1 183 CYS 183 184 184 CYS CYS A . n A 1 184 ASN 184 185 185 ASN ASN A . n A 1 185 CYS 185 186 186 CYS CYS A . n A 1 186 SER 186 187 187 SER SER A . n A 1 187 PHE 187 188 188 PHE PHE A . n A 1 188 ASP 188 189 189 ASP ASP A . n A 1 189 TYR 189 190 190 TYR TYR A . n A 1 190 ILE 190 191 191 ILE ILE A . n A 1 191 SER 191 192 192 SER SER A . n A 1 192 ARG 192 193 193 ARG ARG A . n A 1 193 ASP 193 194 194 ASP ASP A . n A 1 194 SER 194 195 195 SER SER A . n A 1 195 THR 195 196 196 THR THR A . n A 1 196 THR 196 197 197 THR THR A . n A 1 197 ARG 197 198 198 ARG ARG A . n A 1 198 SER 198 199 199 SER SER A . n A 1 199 ASN 199 200 200 ASN ASN A . n A 1 200 ILE 200 201 201 ILE ILE A . n A 1 201 LEU 201 202 202 LEU LEU A . n A 1 202 CYS 202 203 203 CYS CYS A . n A 1 203 MET 203 204 204 MET MET A . n A 1 204 PHE 204 205 205 PHE PHE A . n A 1 205 ILE 205 206 206 ILE ILE A . n A 1 206 LEU 206 207 207 LEU LEU A . n A 1 207 GLY 207 208 208 GLY GLY A . n A 1 208 PHE 208 209 209 PHE PHE A . n A 1 209 PHE 209 210 210 PHE PHE A . n A 1 210 GLY 210 211 211 GLY GLY A . n A 1 211 PRO 211 212 212 PRO PRO A . n A 1 212 ILE 212 213 213 ILE ILE A . n A 1 213 LEU 213 214 214 LEU LEU A . n A 1 214 ILE 214 215 215 ILE ILE A . n A 1 215 ILE 215 216 216 ILE ILE A . n A 1 216 PHE 216 217 217 PHE PHE A . n A 1 217 PHE 217 218 218 PHE PHE A . n A 1 218 CYS 218 219 219 CYS CYS A . n A 1 219 TYR 219 220 220 TYR TYR A . n A 1 220 PHE 220 221 221 PHE PHE A . n A 1 221 ASN 221 222 222 ASN ASN A . n A 1 222 ILE 222 223 223 ILE ILE A . n A 1 223 VAL 223 224 224 VAL VAL A . n A 1 224 MET 224 225 225 MET MET A . n A 1 225 SER 225 226 226 SER SER A . n A 1 226 VAL 226 227 227 VAL VAL A . n A 1 227 SER 227 228 228 SER SER A . n A 1 228 ASN 228 229 229 ASN ASN A . n A 1 229 HIS 229 230 230 HIS HIS A . n A 1 230 GLU 230 231 231 GLU GLU A . n A 1 231 LYS 231 232 232 LYS LYS A . n A 1 232 GLU 232 233 233 GLU GLU A . n A 1 233 MET 233 234 234 MET MET A . n A 1 234 ALA 234 235 235 ALA ALA A . n A 1 235 ALA 235 236 236 ALA ALA A . n A 1 236 MET 236 237 237 MET MET A . n A 1 237 ALA 237 238 238 ALA ALA A . n A 1 238 LYS 238 239 239 LYS LYS A . n A 1 239 ARG 239 240 240 ARG ARG A . n A 1 240 LEU 240 241 241 LEU LEU A . n A 1 241 ASN 241 242 242 ASN ASN A . n A 1 242 ALA 242 243 243 ALA ALA A . n A 1 243 LYS 243 244 244 LYS LYS A . n A 1 244 GLU 244 245 245 GLU GLU A . n A 1 245 LEU 245 246 246 LEU LEU A . n A 1 246 ARG 246 247 247 ARG ARG A . n A 1 247 LYS 247 248 248 LYS LYS A . n A 1 248 ALA 248 249 249 ALA ALA A . n A 1 249 GLN 249 250 250 GLN GLN A . n A 1 250 ALA 250 251 251 ALA ALA A . n A 1 251 GLY 251 252 252 GLY GLY A . n A 1 252 ALA 252 253 253 ALA ALA A . n A 1 253 ASN 253 254 254 ASN ASN A . n A 1 254 ALA 254 255 255 ALA ALA A . n A 1 255 GLU 255 256 256 GLU GLU A . n A 1 256 MET 256 257 257 MET MET A . n A 1 257 ARG 257 258 258 ARG ARG A . n A 1 258 LEU 258 259 259 LEU LEU A . n A 1 259 ALA 259 260 260 ALA ALA A . n A 1 260 LYS 260 261 261 LYS LYS A . n A 1 261 ILE 261 262 262 ILE ILE A . n A 1 262 SER 262 263 263 SER SER A . n A 1 263 ILE 263 264 264 ILE ILE A . n A 1 264 VAL 264 265 265 VAL VAL A . n A 1 265 ILE 265 266 266 ILE ILE A . n A 1 266 VAL 266 267 267 VAL VAL A . n A 1 267 SER 267 268 268 SER SER A . n A 1 268 GLN 268 269 269 GLN GLN A . n A 1 269 PHE 269 270 270 PHE PHE A . n A 1 270 LEU 270 271 271 LEU LEU A . n A 1 271 LEU 271 272 272 LEU LEU A . n A 1 272 SER 272 273 273 SER SER A . n A 1 273 TRP 273 274 274 TRP TRP A . n A 1 274 SER 274 275 275 SER SER A . n A 1 275 PRO 275 276 276 PRO PRO A . n A 1 276 TYR 276 277 277 TYR TYR A . n A 1 277 ALA 277 278 278 ALA ALA A . n A 1 278 VAL 278 279 279 VAL VAL A . n A 1 279 VAL 279 280 280 VAL VAL A . n A 1 280 ALA 280 281 281 ALA ALA A . n A 1 281 LEU 281 282 282 LEU LEU A . n A 1 282 LEU 282 283 283 LEU LEU A . n A 1 283 ALA 283 284 284 ALA ALA A . n A 1 284 GLN 284 285 285 GLN GLN A . n A 1 285 PHE 285 286 286 PHE PHE A . n A 1 286 GLY 286 287 287 GLY GLY A . n A 1 287 PRO 287 288 288 PRO PRO A . n A 1 288 LEU 288 289 289 LEU LEU A . n A 1 289 GLU 289 290 290 GLU GLU A . n A 1 290 TRP 290 291 291 TRP TRP A . n A 1 291 VAL 291 292 292 VAL VAL A . n A 1 292 THR 292 293 293 THR THR A . n A 1 293 PRO 293 294 294 PRO PRO A . n A 1 294 TYR 294 295 295 TYR TYR A . n A 1 295 ALA 295 296 296 ALA ALA A . n A 1 296 ALA 296 297 297 ALA ALA A . n A 1 297 GLN 297 298 298 GLN GLN A . n A 1 298 LEU 298 299 299 LEU LEU A . n A 1 299 PRO 299 300 300 PRO PRO A . n A 1 300 VAL 300 301 301 VAL VAL A . n A 1 301 MET 301 302 302 MET MET A . n A 1 302 PHE 302 303 303 PHE PHE A . n A 1 303 ALA 303 304 304 ALA ALA A . n A 1 304 LYS 304 305 305 LYS RET A . n A 1 305 ALA 305 306 306 ALA ALA A . n A 1 306 SER 306 307 307 SER SER A . n A 1 307 ALA 307 308 308 ALA ALA A . n A 1 308 ILE 308 309 309 ILE ILE A . n A 1 309 HIS 309 310 310 HIS HIS A . n A 1 310 ASN 310 311 311 ASN ASN A . n A 1 311 PRO 311 312 312 PRO PRO A . n A 1 312 MET 312 313 313 MET MET A . n A 1 313 ILE 313 314 314 ILE ILE A . n A 1 314 TYR 314 315 315 TYR TYR A . n A 1 315 SER 315 316 316 SER SER A . n A 1 316 VAL 316 317 317 VAL VAL A . n A 1 317 SER 317 318 318 SER SER A . n A 1 318 HIS 318 319 319 HIS HIS A . n A 1 319 PRO 319 320 320 PRO PRO A . n A 1 320 LYS 320 321 321 LYS LYS A . n A 1 321 PHE 321 322 322 PHE PHE A . n A 1 322 ARG 322 323 323 ARG ARG A . n A 1 323 GLU 323 324 324 GLU GLU A . n A 1 324 ALA 324 325 325 ALA ALA A . n A 1 325 ILE 325 326 326 ILE ILE A . n A 1 326 SER 326 327 327 SER SER A . n A 1 327 GLN 327 328 328 GLN GLN A . n A 1 328 THR 328 329 329 THR THR A . n A 1 329 PHE 329 330 330 PHE PHE A . n A 1 330 PRO 330 331 331 PRO PRO A . n A 1 331 TRP 331 332 332 TRP TRP A . n A 1 332 VAL 332 333 333 VAL VAL A . n A 1 333 LEU 333 334 334 LEU LEU A . n A 1 334 THR 334 335 335 THR THR A . n A 1 335 CYS 335 336 336 CYS PLY A . n A 1 336 CYS 336 337 337 CYS PLY A . n A 1 337 GLN 337 338 338 GLN GLN A . n A 1 338 PHE 338 339 339 PHE PHE A . n A 1 339 ASP 339 340 340 ASP ASP A . n A 1 340 ASP 340 341 341 ASP ASP A . n A 1 341 LYS 341 342 342 LYS LYS A . n A 1 342 GLU 342 343 343 GLU GLU A . n A 1 343 THR 343 344 344 THR THR A . n A 1 344 GLU 344 345 345 GLU GLU A . n A 1 345 ASP 345 346 346 ASP ASP A . n A 1 346 ASP 346 347 347 ASP ASP A . n A 1 347 LYS 347 348 348 LYS LYS A . n A 1 348 ASP 348 349 349 ASP ASP A . n A 1 349 ALA 349 350 350 ALA ALA A . n A 1 350 GLU 350 351 351 GLU GLU A . n A 1 351 THR 351 352 352 THR THR A . n A 1 352 GLU 352 353 353 GLU GLU A . n A 1 353 ILE 353 354 354 ILE ILE A . n A 1 354 PRO 354 355 355 PRO PRO A . n A 1 355 ALA 355 356 356 ALA ALA A . n A 1 356 GLY 356 357 357 GLY GLY A . n A 1 357 GLU 357 358 358 GLU GLU A . n A 1 358 SER 358 359 359 SER SER A . n A 1 359 SER 359 360 360 SER SER A . n A 1 360 ASP 360 361 361 ASP ASP A . n A 1 361 ALA 361 362 362 ALA ALA A . n A 1 362 ALA 362 363 363 ALA ALA A . n A 1 363 PRO 363 364 364 PRO PRO A . n A 1 364 SER 364 365 365 SER SER A . n A 1 365 ALA 365 366 366 ALA ALA A . n A 1 366 ASP 366 367 367 ASP ASP A . n A 1 367 ALA 367 368 368 ALA ALA A . n A 1 368 ALA 368 369 369 ALA ALA A . n A 1 369 GLN 369 370 370 GLN GLN A . n A 1 370 MET 370 371 371 MET MET A . n A 1 371 LYS 371 372 372 LYS LYS A . n A 1 372 GLU 372 373 373 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 380 305 RET RET A . C 3 PLM 1 381 336 PLM PLY A . D 3 PLM 1 382 337 PLM PLY A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 5550 ? 2 MORE -17.2 ? 2 'SSA (A^2)' 36970 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 84.3190000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 71.0825000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOLREP phasing . ? 1 CNS refinement 1.2 ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # _pdbx_entry_details.entry_id 2ZIY _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THERE IS CONFLICTS BETWEEN SEQRES(ILE A 17) AND SEQUENCE DATABASE (VAL). THE AUTHORS CONFIRMED EXPERIMENTALLY BY N-TERMINAL AMINO ACID SEQUENCING, AND THE SEQRES IS CORRECT AND IS THE TRUE IDENTITY OF THIS RESIDUE AND IS NATURAL VARIANT. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A LEU 98 ? ? N A LYS 100 ? ? 2.17 2 1 O A ASP 80 ? ? OG A SER 84 ? ? 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A ASN 14 ? ? N A PRO 15 ? ? CA A PRO 15 ? ? 128.79 119.30 9.49 1.50 Y 2 1 N A GLY 119 ? ? CA A GLY 119 ? ? C A GLY 119 ? ? 95.25 113.10 -17.85 2.50 N 3 1 N A ILE 354 ? ? CA A ILE 354 ? ? C A ILE 354 ? ? 133.05 111.00 22.05 2.70 N 4 1 N A ALA 366 ? ? CA A ALA 366 ? ? C A ALA 366 ? ? 132.65 111.00 21.65 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 5 ? ? 78.14 61.21 2 1 ARG A 6 ? ? 95.10 60.55 3 1 GLU A 9 ? ? -159.02 -67.87 4 1 TRP A 12 ? ? -45.28 -14.78 5 1 PRO A 15 ? ? -38.16 -39.04 6 1 ILE A 18 ? ? -69.48 91.98 7 1 VAL A 19 ? ? -56.37 174.98 8 1 GLU A 25 ? ? -60.92 2.30 9 1 ILE A 39 ? ? -28.70 -51.97 10 1 ILE A 46 ? ? -51.36 -79.33 11 1 ILE A 54 ? ? -52.02 -71.35 12 1 LEU A 58 ? ? -72.39 -76.66 13 1 PHE A 59 ? ? -41.27 -16.25 14 1 SER A 64 ? ? -68.68 4.45 15 1 MET A 71 ? ? -57.01 -9.53 16 1 PHE A 83 ? ? -34.53 -72.00 17 1 LEU A 85 ? ? -51.58 -70.14 18 1 LEU A 91 ? ? -50.18 -82.23 19 1 LYS A 99 ? ? 34.34 7.36 20 1 ILE A 114 ? ? -47.06 -73.10 21 1 PHE A 118 ? ? -66.90 11.39 22 1 ILE A 137 ? ? -133.26 -41.78 23 1 HIS A 149 ? ? -35.44 -35.77 24 1 ARG A 150 ? ? -68.95 -80.16 25 1 ALA A 152 ? ? -38.49 -70.30 26 1 VAL A 159 ? ? -48.80 -74.53 27 1 TRP A 160 ? ? -32.92 -79.24 28 1 LEU A 161 ? ? -26.55 -54.74 29 1 TRP A 162 ? ? -56.92 -72.24 30 1 SER A 163 ? ? -28.91 -56.16 31 1 LEU A 165 ? ? -27.70 -65.27 32 1 TRP A 166 ? ? -68.75 1.27 33 1 ALA A 176 ? ? 167.43 159.13 34 1 THR A 178 ? ? -141.85 -159.40 35 1 SER A 187 ? ? -175.27 -174.56 36 1 ILE A 191 ? ? -85.92 -81.15 37 1 SER A 192 ? ? -35.71 121.11 38 1 ARG A 193 ? ? -103.20 40.49 39 1 PHE A 209 ? ? -134.96 -57.13 40 1 TYR A 220 ? ? -55.77 21.13 41 1 PHE A 221 ? ? -122.26 -67.55 42 1 ALA A 284 ? ? -48.58 -16.87 43 1 PRO A 288 ? ? -60.26 76.28 44 1 VAL A 292 ? ? -46.74 59.53 45 1 ASN A 311 ? ? -27.07 -65.40 46 1 SER A 316 ? ? -59.50 15.02 47 1 SER A 318 ? ? -155.72 -13.78 48 1 PRO A 320 ? ? -73.59 -84.29 49 1 LYS A 321 ? ? -30.18 -35.61 50 1 PHE A 322 ? ? -64.76 -73.44 51 1 ARG A 323 ? ? -36.61 -37.84 52 1 ILE A 326 ? ? -50.11 -71.83 53 1 TRP A 332 ? ? -39.38 -21.88 54 1 CYS A 337 ? ? -173.11 54.63 55 1 ASP A 341 ? ? -46.07 -16.80 56 1 ASP A 347 ? ? -68.12 -81.19 57 1 LYS A 348 ? ? -18.56 -59.66 58 1 ASP A 349 ? ? -52.18 -9.15 59 1 GLU A 351 ? ? -108.46 67.40 60 1 PRO A 355 ? ? -53.26 87.99 61 1 ALA A 356 ? ? 116.47 78.28 62 1 GLU A 358 ? ? 71.82 95.13 63 1 SER A 359 ? ? -155.76 79.25 64 1 ASP A 361 ? ? -80.51 38.18 65 1 ALA A 362 ? ? -152.49 76.69 66 1 SER A 365 ? ? -160.08 88.35 67 1 ASP A 367 ? ? 75.68 64.93 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 2 ? A GLY 1 2 1 Y 1 A ARG 3 ? A ARG 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PLM C1 C N N 270 PLM O1 O N N 271 PLM O2 O N N 272 PLM C2 C N N 273 PLM C3 C N N 274 PLM C4 C N N 275 PLM C5 C N N 276 PLM C6 C N N 277 PLM C7 C N N 278 PLM C8 C N N 279 PLM C9 C N N 280 PLM CA C N N 281 PLM CB C N N 282 PLM CC C N N 283 PLM CD C N N 284 PLM CE C N N 285 PLM CF C N N 286 PLM CG C N N 287 PLM H H N N 288 PLM H21 H N N 289 PLM H22 H N N 290 PLM H31 H N N 291 PLM H32 H N N 292 PLM H41 H N N 293 PLM H42 H N N 294 PLM H51 H N N 295 PLM H52 H N N 296 PLM H61 H N N 297 PLM H62 H N N 298 PLM H71 H N N 299 PLM H72 H N N 300 PLM H81 H N N 301 PLM H82 H N N 302 PLM H91 H N N 303 PLM H92 H N N 304 PLM HA1 H N N 305 PLM HA2 H N N 306 PLM HB1 H N N 307 PLM HB2 H N N 308 PLM HC1 H N N 309 PLM HC2 H N N 310 PLM HD1 H N N 311 PLM HD2 H N N 312 PLM HE1 H N N 313 PLM HE2 H N N 314 PLM HF1 H N N 315 PLM HF2 H N N 316 PLM HG1 H N N 317 PLM HG2 H N N 318 PLM HG3 H N N 319 PRO N N N N 320 PRO CA C N S 321 PRO C C N N 322 PRO O O N N 323 PRO CB C N N 324 PRO CG C N N 325 PRO CD C N N 326 PRO OXT O N N 327 PRO H H N N 328 PRO HA H N N 329 PRO HB2 H N N 330 PRO HB3 H N N 331 PRO HG2 H N N 332 PRO HG3 H N N 333 PRO HD2 H N N 334 PRO HD3 H N N 335 PRO HXT H N N 336 RET C1 C N N 337 RET C2 C N N 338 RET C3 C N N 339 RET C4 C N N 340 RET C5 C N N 341 RET C6 C N N 342 RET C7 C N N 343 RET C8 C N N 344 RET C9 C N N 345 RET C10 C N N 346 RET C11 C N N 347 RET C12 C N N 348 RET C13 C N N 349 RET C14 C N N 350 RET C15 C N N 351 RET O1 O N N 352 RET C16 C N N 353 RET C17 C N N 354 RET C18 C N N 355 RET C19 C N N 356 RET C20 C N N 357 RET H21 H N N 358 RET H22 H N N 359 RET H31 H N N 360 RET H32 H N N 361 RET H41 H N N 362 RET H42 H N N 363 RET H7 H N N 364 RET H8 H N N 365 RET H10 H N N 366 RET H11 H N N 367 RET H12 H N N 368 RET H14 H N N 369 RET H15 H N N 370 RET H161 H N N 371 RET H162 H N N 372 RET H163 H N N 373 RET H171 H N N 374 RET H172 H N N 375 RET H173 H N N 376 RET H181 H N N 377 RET H182 H N N 378 RET H183 H N N 379 RET H191 H N N 380 RET H192 H N N 381 RET H193 H N N 382 RET H201 H N N 383 RET H202 H N N 384 RET H203 H N N 385 SER N N N N 386 SER CA C N S 387 SER C C N N 388 SER O O N N 389 SER CB C N N 390 SER OG O N N 391 SER OXT O N N 392 SER H H N N 393 SER H2 H N N 394 SER HA H N N 395 SER HB2 H N N 396 SER HB3 H N N 397 SER HG H N N 398 SER HXT H N N 399 THR N N N N 400 THR CA C N S 401 THR C C N N 402 THR O O N N 403 THR CB C N R 404 THR OG1 O N N 405 THR CG2 C N N 406 THR OXT O N N 407 THR H H N N 408 THR H2 H N N 409 THR HA H N N 410 THR HB H N N 411 THR HG1 H N N 412 THR HG21 H N N 413 THR HG22 H N N 414 THR HG23 H N N 415 THR HXT H N N 416 TRP N N N N 417 TRP CA C N S 418 TRP C C N N 419 TRP O O N N 420 TRP CB C N N 421 TRP CG C Y N 422 TRP CD1 C Y N 423 TRP CD2 C Y N 424 TRP NE1 N Y N 425 TRP CE2 C Y N 426 TRP CE3 C Y N 427 TRP CZ2 C Y N 428 TRP CZ3 C Y N 429 TRP CH2 C Y N 430 TRP OXT O N N 431 TRP H H N N 432 TRP H2 H N N 433 TRP HA H N N 434 TRP HB2 H N N 435 TRP HB3 H N N 436 TRP HD1 H N N 437 TRP HE1 H N N 438 TRP HE3 H N N 439 TRP HZ2 H N N 440 TRP HZ3 H N N 441 TRP HH2 H N N 442 TRP HXT H N N 443 TYR N N N N 444 TYR CA C N S 445 TYR C C N N 446 TYR O O N N 447 TYR CB C N N 448 TYR CG C Y N 449 TYR CD1 C Y N 450 TYR CD2 C Y N 451 TYR CE1 C Y N 452 TYR CE2 C Y N 453 TYR CZ C Y N 454 TYR OH O N N 455 TYR OXT O N N 456 TYR H H N N 457 TYR H2 H N N 458 TYR HA H N N 459 TYR HB2 H N N 460 TYR HB3 H N N 461 TYR HD1 H N N 462 TYR HD2 H N N 463 TYR HE1 H N N 464 TYR HE2 H N N 465 TYR HH H N N 466 TYR HXT H N N 467 VAL N N N N 468 VAL CA C N S 469 VAL C C N N 470 VAL O O N N 471 VAL CB C N N 472 VAL CG1 C N N 473 VAL CG2 C N N 474 VAL OXT O N N 475 VAL H H N N 476 VAL H2 H N N 477 VAL HA H N N 478 VAL HB H N N 479 VAL HG11 H N N 480 VAL HG12 H N N 481 VAL HG13 H N N 482 VAL HG21 H N N 483 VAL HG22 H N N 484 VAL HG23 H N N 485 VAL HXT H N N 486 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PLM C1 O1 sing N N 258 PLM C1 O2 doub N N 259 PLM C1 C2 sing N N 260 PLM O1 H sing N N 261 PLM C2 C3 sing N N 262 PLM C2 H21 sing N N 263 PLM C2 H22 sing N N 264 PLM C3 C4 sing N N 265 PLM C3 H31 sing N N 266 PLM C3 H32 sing N N 267 PLM C4 C5 sing N N 268 PLM C4 H41 sing N N 269 PLM C4 H42 sing N N 270 PLM C5 C6 sing N N 271 PLM C5 H51 sing N N 272 PLM C5 H52 sing N N 273 PLM C6 C7 sing N N 274 PLM C6 H61 sing N N 275 PLM C6 H62 sing N N 276 PLM C7 C8 sing N N 277 PLM C7 H71 sing N N 278 PLM C7 H72 sing N N 279 PLM C8 C9 sing N N 280 PLM C8 H81 sing N N 281 PLM C8 H82 sing N N 282 PLM C9 CA sing N N 283 PLM C9 H91 sing N N 284 PLM C9 H92 sing N N 285 PLM CA CB sing N N 286 PLM CA HA1 sing N N 287 PLM CA HA2 sing N N 288 PLM CB CC sing N N 289 PLM CB HB1 sing N N 290 PLM CB HB2 sing N N 291 PLM CC CD sing N N 292 PLM CC HC1 sing N N 293 PLM CC HC2 sing N N 294 PLM CD CE sing N N 295 PLM CD HD1 sing N N 296 PLM CD HD2 sing N N 297 PLM CE CF sing N N 298 PLM CE HE1 sing N N 299 PLM CE HE2 sing N N 300 PLM CF CG sing N N 301 PLM CF HF1 sing N N 302 PLM CF HF2 sing N N 303 PLM CG HG1 sing N N 304 PLM CG HG2 sing N N 305 PLM CG HG3 sing N N 306 PRO N CA sing N N 307 PRO N CD sing N N 308 PRO N H sing N N 309 PRO CA C sing N N 310 PRO CA CB sing N N 311 PRO CA HA sing N N 312 PRO C O doub N N 313 PRO C OXT sing N N 314 PRO CB CG sing N N 315 PRO CB HB2 sing N N 316 PRO CB HB3 sing N N 317 PRO CG CD sing N N 318 PRO CG HG2 sing N N 319 PRO CG HG3 sing N N 320 PRO CD HD2 sing N N 321 PRO CD HD3 sing N N 322 PRO OXT HXT sing N N 323 RET C1 C2 sing N N 324 RET C1 C6 sing N N 325 RET C1 C16 sing N N 326 RET C1 C17 sing N N 327 RET C2 C3 sing N N 328 RET C2 H21 sing N N 329 RET C2 H22 sing N N 330 RET C3 C4 sing N N 331 RET C3 H31 sing N N 332 RET C3 H32 sing N N 333 RET C4 C5 sing N N 334 RET C4 H41 sing N N 335 RET C4 H42 sing N N 336 RET C5 C6 doub N N 337 RET C5 C18 sing N N 338 RET C6 C7 sing N N 339 RET C7 C8 doub N E 340 RET C7 H7 sing N N 341 RET C8 C9 sing N N 342 RET C8 H8 sing N N 343 RET C9 C10 doub N E 344 RET C9 C19 sing N N 345 RET C10 C11 sing N N 346 RET C10 H10 sing N N 347 RET C11 C12 doub N E 348 RET C11 H11 sing N N 349 RET C12 C13 sing N N 350 RET C12 H12 sing N N 351 RET C13 C14 doub N E 352 RET C13 C20 sing N N 353 RET C14 C15 sing N N 354 RET C14 H14 sing N N 355 RET C15 O1 doub N N 356 RET C15 H15 sing N N 357 RET C16 H161 sing N N 358 RET C16 H162 sing N N 359 RET C16 H163 sing N N 360 RET C17 H171 sing N N 361 RET C17 H172 sing N N 362 RET C17 H173 sing N N 363 RET C18 H181 sing N N 364 RET C18 H182 sing N N 365 RET C18 H183 sing N N 366 RET C19 H191 sing N N 367 RET C19 H192 sing N N 368 RET C19 H193 sing N N 369 RET C20 H201 sing N N 370 RET C20 H202 sing N N 371 RET C20 H203 sing N N 372 SER N CA sing N N 373 SER N H sing N N 374 SER N H2 sing N N 375 SER CA C sing N N 376 SER CA CB sing N N 377 SER CA HA sing N N 378 SER C O doub N N 379 SER C OXT sing N N 380 SER CB OG sing N N 381 SER CB HB2 sing N N 382 SER CB HB3 sing N N 383 SER OG HG sing N N 384 SER OXT HXT sing N N 385 THR N CA sing N N 386 THR N H sing N N 387 THR N H2 sing N N 388 THR CA C sing N N 389 THR CA CB sing N N 390 THR CA HA sing N N 391 THR C O doub N N 392 THR C OXT sing N N 393 THR CB OG1 sing N N 394 THR CB CG2 sing N N 395 THR CB HB sing N N 396 THR OG1 HG1 sing N N 397 THR CG2 HG21 sing N N 398 THR CG2 HG22 sing N N 399 THR CG2 HG23 sing N N 400 THR OXT HXT sing N N 401 TRP N CA sing N N 402 TRP N H sing N N 403 TRP N H2 sing N N 404 TRP CA C sing N N 405 TRP CA CB sing N N 406 TRP CA HA sing N N 407 TRP C O doub N N 408 TRP C OXT sing N N 409 TRP CB CG sing N N 410 TRP CB HB2 sing N N 411 TRP CB HB3 sing N N 412 TRP CG CD1 doub Y N 413 TRP CG CD2 sing Y N 414 TRP CD1 NE1 sing Y N 415 TRP CD1 HD1 sing N N 416 TRP CD2 CE2 doub Y N 417 TRP CD2 CE3 sing Y N 418 TRP NE1 CE2 sing Y N 419 TRP NE1 HE1 sing N N 420 TRP CE2 CZ2 sing Y N 421 TRP CE3 CZ3 doub Y N 422 TRP CE3 HE3 sing N N 423 TRP CZ2 CH2 doub Y N 424 TRP CZ2 HZ2 sing N N 425 TRP CZ3 CH2 sing Y N 426 TRP CZ3 HZ3 sing N N 427 TRP CH2 HH2 sing N N 428 TRP OXT HXT sing N N 429 TYR N CA sing N N 430 TYR N H sing N N 431 TYR N H2 sing N N 432 TYR CA C sing N N 433 TYR CA CB sing N N 434 TYR CA HA sing N N 435 TYR C O doub N N 436 TYR C OXT sing N N 437 TYR CB CG sing N N 438 TYR CB HB2 sing N N 439 TYR CB HB3 sing N N 440 TYR CG CD1 doub Y N 441 TYR CG CD2 sing Y N 442 TYR CD1 CE1 sing Y N 443 TYR CD1 HD1 sing N N 444 TYR CD2 CE2 doub Y N 445 TYR CD2 HD2 sing N N 446 TYR CE1 CZ doub Y N 447 TYR CE1 HE1 sing N N 448 TYR CE2 CZ sing Y N 449 TYR CE2 HE2 sing N N 450 TYR CZ OH sing N N 451 TYR OH HH sing N N 452 TYR OXT HXT sing N N 453 VAL N CA sing N N 454 VAL N H sing N N 455 VAL N H2 sing N N 456 VAL CA C sing N N 457 VAL CA CB sing N N 458 VAL CA HA sing N N 459 VAL C O doub N N 460 VAL C OXT sing N N 461 VAL CB CG1 sing N N 462 VAL CB CG2 sing N N 463 VAL CB HB sing N N 464 VAL CG1 HG11 sing N N 465 VAL CG1 HG12 sing N N 466 VAL CG1 HG13 sing N N 467 VAL CG2 HG21 sing N N 468 VAL CG2 HG22 sing N N 469 VAL CG2 HG23 sing N N 470 VAL OXT HXT sing N N 471 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 'PALMITIC ACID' PLM # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GZM _pdbx_initial_refinement_model.details 'PDB ENTRY 1GZM' #