data_2ZQN # _entry.id 2ZQN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZQN pdb_00002zqn 10.2210/pdb2zqn/pdb RCSB RCSB028303 ? ? WWPDB D_1000028303 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2008-09-02 _pdbx_database_PDB_obs_spr.pdb_id 2ZQN _pdbx_database_PDB_obs_spr.replace_pdb_id 2D12 _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2DRY 'Ligand free form of the mutant lectin.' unspecified PDB 2DRZ 'The mutant lectin in complex with lactose.' unspecified PDB 2DS0 ;The mutant lectin in complex with 6'-sialyllactose. ; unspecified PDB 2ZQO . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZQN _pdbx_database_status.recvd_initial_deposition_date 2008-08-13 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Suzuki, R.' 1 'Kuno, A.' 2 'Hasegawa, T.' 3 'Hirabayashi, J.' 4 'Kasai, K.' 5 'Momma, M.' 6 'Fujimoto, Z.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris' 'Acta Crystallogr.,Sect.D' 65 49 57 2009 ABCRE6 DK 0907-4449 0766 ? 19153466 10.1107/S0907444908037451 1 ;Crystallization and preliminary X-ray crystallographic studies of the C-terminal domain of galactose-binding lectin EW29 from the earthworm Lumbricus terrestris ; 'Acta Crystallogr.,Sect.D' 60 1895 1896 2004 ABCRE6 DK 0907-4449 0766 ? 15388944 10.1107/S0907444904018979 2 'Tailoring a novel sialic acid-binding lectin from a ricin-B chain-like galactose-binding protein by natural evolution-mimicry' J.Biochem. 141 389 399 2007 ? JP 0021-924X ? ? 17234683 10.1093/jb/mvm043 3 ;Novel galactose-binding proteins in Annelida. Characterization of 29-kDa tandem repeat-type lectins from the earthworm Lumbricus terrestris ; J.Biol.Chem. 273 14450 14460 1998 JBCHA3 US 0021-9258 0071 ? 9603958 10.1074/jbc.273.23.14450 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Suzuki, R.' 1 ? primary 'Kuno, A.' 2 ? primary 'Hasegawa, T.' 3 ? primary 'Hirabayashi, J.' 4 ? primary 'Kasai, K.' 5 ? primary 'Momma, M.' 6 ? primary 'Fujimoto, Z.' 7 ? 1 'Suzuki, R.' 8 ? 1 'Fujimoto, Z.' 9 ? 1 'Kuno, A.' 10 ? 1 'Hirabayashi, J.' 11 ? 1 'Kasai, K.' 12 ? 1 'Hasegawa, T.' 13 ? 2 'Yabe, R.' 14 ? 2 'Suzuki, R.' 15 ? 2 'Kuno, A.' 16 ? 2 'Fujimoto, Z.' 17 ? 2 'Jigami, Y.' 18 ? 2 'Hirabayashi, J.' 19 ? 3 'Hirabayashi, J.' 20 ? 3 'Dutta, S.K.' 21 ? 3 'Kasai, K.' 22 ? # _cell.entry_id 2ZQN _cell.length_a 61.166 _cell.length_b 61.166 _cell.length_c 175.597 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZQN _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '29-kDa galactose-binding lectin' 14746.550 2 ? ? 'C-terminal domain' ? 2 branched man 'beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 342.297 4 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 4 non-polymer syn IMIDAZOLE 69.085 2 ? ? ? ? 5 water nat water 18.015 285 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name beta-lactose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KPKFFYIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASHEQIETQPFDPNNPK RAWIVSGNTIAQLSDRDIVLDIIKSDKEAGAHICAWKQHGGPNQKFIIESE ; _entity_poly.pdbx_seq_one_letter_code_can ;KPKFFYIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASHEQIETQPFDPNNPK RAWIVSGNTIAQLSDRDIVLDIIKSDKEAGAHICAWKQHGGPNQKFIIESE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 PRO n 1 3 LYS n 1 4 PHE n 1 5 PHE n 1 6 TYR n 1 7 ILE n 1 8 LYS n 1 9 SER n 1 10 GLU n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 LYS n 1 15 VAL n 1 16 LEU n 1 17 ASP n 1 18 ILE n 1 19 GLU n 1 20 GLY n 1 21 GLN n 1 22 ASN n 1 23 PRO n 1 24 ALA n 1 25 PRO n 1 26 GLY n 1 27 SER n 1 28 LYS n 1 29 ILE n 1 30 ILE n 1 31 THR n 1 32 TRP n 1 33 ASP n 1 34 GLN n 1 35 LYS n 1 36 LYS n 1 37 GLY n 1 38 PRO n 1 39 THR n 1 40 ALA n 1 41 VAL n 1 42 ASN n 1 43 GLN n 1 44 LEU n 1 45 TRP n 1 46 TYR n 1 47 THR n 1 48 ASP n 1 49 GLN n 1 50 GLN n 1 51 GLY n 1 52 VAL n 1 53 ILE n 1 54 ARG n 1 55 SER n 1 56 LYS n 1 57 LEU n 1 58 ASN n 1 59 ASP n 1 60 PHE n 1 61 ALA n 1 62 ILE n 1 63 ASP n 1 64 ALA n 1 65 SER n 1 66 HIS n 1 67 GLU n 1 68 GLN n 1 69 ILE n 1 70 GLU n 1 71 THR n 1 72 GLN n 1 73 PRO n 1 74 PHE n 1 75 ASP n 1 76 PRO n 1 77 ASN n 1 78 ASN n 1 79 PRO n 1 80 LYS n 1 81 ARG n 1 82 ALA n 1 83 TRP n 1 84 ILE n 1 85 VAL n 1 86 SER n 1 87 GLY n 1 88 ASN n 1 89 THR n 1 90 ILE n 1 91 ALA n 1 92 GLN n 1 93 LEU n 1 94 SER n 1 95 ASP n 1 96 ARG n 1 97 ASP n 1 98 ILE n 1 99 VAL n 1 100 LEU n 1 101 ASP n 1 102 ILE n 1 103 ILE n 1 104 LYS n 1 105 SER n 1 106 ASP n 1 107 LYS n 1 108 GLU n 1 109 ALA n 1 110 GLY n 1 111 ALA n 1 112 HIS n 1 113 ILE n 1 114 CYS n 1 115 ALA n 1 116 TRP n 1 117 LYS n 1 118 GLN n 1 119 HIS n 1 120 GLY n 1 121 GLY n 1 122 PRO n 1 123 ASN n 1 124 GLN n 1 125 LYS n 1 126 PHE n 1 127 ILE n 1 128 ILE n 1 129 GLU n 1 130 SER n 1 131 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Common earthworm' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lumbricus terrestris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6398 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O96048_LUMTE _struct_ref.pdbx_db_accession O96048 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KPKFFYIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASHEQIETQPFDPNNPK RAWIVSGNTIAQLSDRDIVLDIIKSDKEAGAHICAWKQHGGPNQKFIIESE ; _struct_ref.pdbx_align_begin 130 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZQN A 1 ? 131 ? O96048 130 ? 260 ? 130 260 2 1 2ZQN B 1 ? 131 ? O96048 130 ? 260 ? 130 260 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZQN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_percent_sol 55.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details ;sodium chloride, dipotassium hydrogen phosphate, sodium dihydrogen phosphate, imidazole, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2003-12-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978 # _reflns.entry_id 2ZQN _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 27297 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.294 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy 7.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2660 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2ZQN _refine.ls_number_reflns_obs 25849 _refine.ls_number_reflns_all 27228 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.29 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.95 _refine.ls_R_factor_obs 0.1788 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17645 _refine.ls_R_factor_R_free 0.22547 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1366 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 22.103 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1XYF' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.135 _refine.pdbx_overall_ESU_R_Free 0.135 _refine.overall_SU_ML 0.083 _refine.overall_SU_B 2.764 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2100 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 112 _refine_hist.number_atoms_solvent 285 _refine_hist.number_atoms_total 2497 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 42.29 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 2264 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.403 1.994 ? 3078 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.602 5.000 ? 260 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.576 26.190 ? 105 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.757 15.000 ? 383 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6.125 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.100 0.200 ? 353 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1654 'X-RAY DIFFRACTION' ? r_nbd_refined 0.189 0.200 ? 1000 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.312 0.200 ? 1537 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.131 0.200 ? 261 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.203 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.153 0.200 ? 15 'X-RAY DIFFRACTION' ? r_mcbond_it 0.886 1.500 ? 1354 'X-RAY DIFFRACTION' ? r_mcangle_it 1.453 2.000 ? 2135 'X-RAY DIFFRACTION' ? r_scbond_it 2.222 3.000 ? 1039 'X-RAY DIFFRACTION' ? r_scangle_it 3.630 4.500 ? 943 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_R_work 1849 _refine_ls_shell.R_factor_R_work 0.208 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.235 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 111 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2660 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ZQN _struct.title 'Crystal structure of the earthworm R-type lectin C-half in complex with Lactose' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZQN _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'EARTHWORM LUMBRICUS TERRESTRIS, HEMAGGLUTININ, R-TYPE LECTIN, BETA-TREFOIL FOLD, SUGAR COMPLEX, Lectin, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 20 ? ASN A 22 ? GLY A 149 ASN A 151 5 ? 3 HELX_P HELX_P2 2 GLY A 37 ? GLN A 43 ? GLY A 166 GLN A 172 5 ? 7 HELX_P HELX_P3 3 ASN A 78 ? ARG A 81 ? ASN A 207 ARG A 210 5 ? 4 HELX_P HELX_P4 4 LYS A 104 ? ASP A 106 ? LYS A 233 ASP A 235 5 ? 3 HELX_P HELX_P5 5 GLY A 121 ? GLN A 124 ? GLY A 250 GLN A 253 5 ? 4 HELX_P HELX_P6 6 GLY B 20 ? ASN B 22 ? GLY B 149 ASN B 151 5 ? 3 HELX_P HELX_P7 7 GLY B 37 ? GLN B 43 ? GLY B 166 GLN B 172 5 ? 7 HELX_P HELX_P8 8 ASN B 78 ? ARG B 81 ? ASN B 207 ARG B 210 5 ? 4 HELX_P HELX_P9 9 LYS B 104 ? ASP B 106 ? LYS B 233 ASP B 235 5 ? 3 HELX_P HELX_P10 10 GLY B 121 ? GLN B 124 ? GLY B 250 GLN B 253 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C BGC . O4 ? ? ? 1_555 C GAL . C1 ? ? C BGC 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.418 ? ? covale2 covale both ? D BGC . O4 ? ? ? 1_555 D GAL . C1 ? ? D BGC 1 D GAL 2 1_555 ? ? ? ? ? ? ? 1.457 ? ? covale3 covale both ? E BGC . O4 ? ? ? 1_555 E GAL . C1 ? ? E BGC 1 E GAL 2 1_555 ? ? ? ? ? ? ? 1.414 ? ? covale4 covale both ? F BGC . O4 ? ? ? 1_555 F GAL . C1 ? ? F BGC 1 F GAL 2 1_555 ? ? ? ? ? ? ? 1.423 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 4 ? F ? 2 ? G ? 2 ? H ? 2 ? I ? 2 ? J ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 5 ? SER A 9 ? PHE A 134 SER A 138 A 2 PHE A 126 ? SER A 130 ? PHE A 255 SER A 259 B 1 VAL A 15 ? ILE A 18 ? VAL A 144 ILE A 147 B 2 ILE A 29 ? TRP A 32 ? ILE A 158 TRP A 161 C 1 TRP A 45 ? THR A 47 ? TRP A 174 THR A 176 C 2 ILE A 53 ? SER A 55 ? ILE A 182 SER A 184 D 1 ALA A 61 ? ASP A 63 ? ALA A 190 ASP A 192 D 2 GLU A 70 ? GLN A 72 ? GLU A 199 GLN A 201 E 1 TRP A 83 ? SER A 86 ? TRP A 212 SER A 215 E 2 THR A 89 ? GLN A 92 ? THR A 218 GLN A 221 E 3 ASP A 95 ? ILE A 102 ? ASP A 224 ILE A 231 E 4 ILE A 113 ? LYS A 117 ? ILE A 242 LYS A 246 F 1 PHE B 5 ? SER B 9 ? PHE B 134 SER B 138 F 2 PHE B 126 ? SER B 130 ? PHE B 255 SER B 259 G 1 VAL B 15 ? ILE B 18 ? VAL B 144 ILE B 147 G 2 ILE B 29 ? TRP B 32 ? ILE B 158 TRP B 161 H 1 TRP B 45 ? THR B 47 ? TRP B 174 THR B 176 H 2 ILE B 53 ? SER B 55 ? ILE B 182 SER B 184 I 1 ALA B 61 ? ASP B 63 ? ALA B 190 ASP B 192 I 2 GLU B 70 ? GLN B 72 ? GLU B 199 GLN B 201 J 1 TRP B 83 ? SER B 86 ? TRP B 212 SER B 215 J 2 THR B 89 ? GLN B 92 ? THR B 218 GLN B 221 J 3 ASP B 95 ? ILE B 102 ? ASP B 224 ILE B 231 J 4 ILE B 113 ? LYS B 117 ? ILE B 242 LYS B 246 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 6 ? N TYR A 135 O GLU A 129 ? O GLU A 258 B 1 2 N VAL A 15 ? N VAL A 144 O TRP A 32 ? O TRP A 161 C 1 2 N TYR A 46 ? N TYR A 175 O ARG A 54 ? O ARG A 183 D 1 2 N ASP A 63 ? N ASP A 192 O GLU A 70 ? O GLU A 199 E 1 2 N SER A 86 ? N SER A 215 O THR A 89 ? O THR A 218 E 2 3 N ILE A 90 ? N ILE A 219 O LEU A 100 ? O LEU A 229 E 3 4 N ASP A 101 ? N ASP A 230 O CYS A 114 ? O CYS A 243 F 1 2 N TYR B 6 ? N TYR B 135 O GLU B 129 ? O GLU B 258 G 1 2 N ASP B 17 ? N ASP B 146 O ILE B 30 ? O ILE B 159 H 1 2 N TYR B 46 ? N TYR B 175 O ARG B 54 ? O ARG B 183 I 1 2 N ALA B 61 ? N ALA B 190 O GLN B 72 ? O GLN B 201 J 1 2 N SER B 86 ? N SER B 215 O THR B 89 ? O THR B 218 J 2 3 N ILE B 90 ? N ILE B 219 O LEU B 100 ? O LEU B 229 J 3 4 N VAL B 99 ? N VAL B 228 O TRP B 116 ? O TRP B 245 # _database_PDB_matrix.entry_id 2ZQN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZQN _atom_sites.fract_transf_matrix[1][1] 0.016349 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016349 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005695 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 130 130 LYS LYS A . n A 1 2 PRO 2 131 131 PRO PRO A . n A 1 3 LYS 3 132 132 LYS LYS A . n A 1 4 PHE 4 133 133 PHE PHE A . n A 1 5 PHE 5 134 134 PHE PHE A . n A 1 6 TYR 6 135 135 TYR TYR A . n A 1 7 ILE 7 136 136 ILE ILE A . n A 1 8 LYS 8 137 137 LYS LYS A . n A 1 9 SER 9 138 138 SER SER A . n A 1 10 GLU 10 139 139 GLU GLU A . n A 1 11 LEU 11 140 140 LEU LEU A . n A 1 12 ASN 12 141 141 ASN ASN A . n A 1 13 GLY 13 142 142 GLY GLY A . n A 1 14 LYS 14 143 143 LYS LYS A . n A 1 15 VAL 15 144 144 VAL VAL A . n A 1 16 LEU 16 145 145 LEU LEU A . n A 1 17 ASP 17 146 146 ASP ASP A . n A 1 18 ILE 18 147 147 ILE ILE A . n A 1 19 GLU 19 148 148 GLU GLU A . n A 1 20 GLY 20 149 149 GLY GLY A . n A 1 21 GLN 21 150 150 GLN GLN A . n A 1 22 ASN 22 151 151 ASN ASN A . n A 1 23 PRO 23 152 152 PRO PRO A . n A 1 24 ALA 24 153 153 ALA ALA A . n A 1 25 PRO 25 154 154 PRO PRO A . n A 1 26 GLY 26 155 155 GLY GLY A . n A 1 27 SER 27 156 156 SER SER A . n A 1 28 LYS 28 157 157 LYS LYS A . n A 1 29 ILE 29 158 158 ILE ILE A . n A 1 30 ILE 30 159 159 ILE ILE A . n A 1 31 THR 31 160 160 THR THR A . n A 1 32 TRP 32 161 161 TRP TRP A . n A 1 33 ASP 33 162 162 ASP ASP A . n A 1 34 GLN 34 163 163 GLN GLN A . n A 1 35 LYS 35 164 164 LYS LYS A . n A 1 36 LYS 36 165 165 LYS LYS A . n A 1 37 GLY 37 166 166 GLY GLY A . n A 1 38 PRO 38 167 167 PRO PRO A . n A 1 39 THR 39 168 168 THR THR A . n A 1 40 ALA 40 169 169 ALA ALA A . n A 1 41 VAL 41 170 170 VAL VAL A . n A 1 42 ASN 42 171 171 ASN ASN A . n A 1 43 GLN 43 172 172 GLN GLN A . n A 1 44 LEU 44 173 173 LEU LEU A . n A 1 45 TRP 45 174 174 TRP TRP A . n A 1 46 TYR 46 175 175 TYR TYR A . n A 1 47 THR 47 176 176 THR THR A . n A 1 48 ASP 48 177 177 ASP ASP A . n A 1 49 GLN 49 178 178 GLN GLN A . n A 1 50 GLN 50 179 179 GLN GLN A . n A 1 51 GLY 51 180 180 GLY GLY A . n A 1 52 VAL 52 181 181 VAL VAL A . n A 1 53 ILE 53 182 182 ILE ILE A . n A 1 54 ARG 54 183 183 ARG ARG A . n A 1 55 SER 55 184 184 SER SER A . n A 1 56 LYS 56 185 185 LYS LYS A . n A 1 57 LEU 57 186 186 LEU LEU A . n A 1 58 ASN 58 187 187 ASN ASN A . n A 1 59 ASP 59 188 188 ASP ASP A . n A 1 60 PHE 60 189 189 PHE PHE A . n A 1 61 ALA 61 190 190 ALA ALA A . n A 1 62 ILE 62 191 191 ILE ILE A . n A 1 63 ASP 63 192 192 ASP ASP A . n A 1 64 ALA 64 193 193 ALA ALA A . n A 1 65 SER 65 194 194 SER SER A . n A 1 66 HIS 66 195 195 HIS HIS A . n A 1 67 GLU 67 196 196 GLU GLU A . n A 1 68 GLN 68 197 197 GLN GLN A . n A 1 69 ILE 69 198 198 ILE ILE A . n A 1 70 GLU 70 199 199 GLU GLU A . n A 1 71 THR 71 200 200 THR THR A . n A 1 72 GLN 72 201 201 GLN GLN A . n A 1 73 PRO 73 202 202 PRO PRO A . n A 1 74 PHE 74 203 203 PHE PHE A . n A 1 75 ASP 75 204 204 ASP ASP A . n A 1 76 PRO 76 205 205 PRO PRO A . n A 1 77 ASN 77 206 206 ASN ASN A . n A 1 78 ASN 78 207 207 ASN ASN A . n A 1 79 PRO 79 208 208 PRO PRO A . n A 1 80 LYS 80 209 209 LYS LYS A . n A 1 81 ARG 81 210 210 ARG ARG A . n A 1 82 ALA 82 211 211 ALA ALA A . n A 1 83 TRP 83 212 212 TRP TRP A . n A 1 84 ILE 84 213 213 ILE ILE A . n A 1 85 VAL 85 214 214 VAL VAL A . n A 1 86 SER 86 215 215 SER SER A . n A 1 87 GLY 87 216 216 GLY GLY A . n A 1 88 ASN 88 217 217 ASN ASN A . n A 1 89 THR 89 218 218 THR THR A . n A 1 90 ILE 90 219 219 ILE ILE A . n A 1 91 ALA 91 220 220 ALA ALA A . n A 1 92 GLN 92 221 221 GLN GLN A . n A 1 93 LEU 93 222 222 LEU LEU A . n A 1 94 SER 94 223 223 SER SER A . n A 1 95 ASP 95 224 224 ASP ASP A . n A 1 96 ARG 96 225 225 ARG ARG A . n A 1 97 ASP 97 226 226 ASP ASP A . n A 1 98 ILE 98 227 227 ILE ILE A . n A 1 99 VAL 99 228 228 VAL VAL A . n A 1 100 LEU 100 229 229 LEU LEU A . n A 1 101 ASP 101 230 230 ASP ASP A . n A 1 102 ILE 102 231 231 ILE ILE A . n A 1 103 ILE 103 232 232 ILE ILE A . n A 1 104 LYS 104 233 233 LYS LYS A . n A 1 105 SER 105 234 234 SER SER A . n A 1 106 ASP 106 235 235 ASP ASP A . n A 1 107 LYS 107 236 236 LYS LYS A . n A 1 108 GLU 108 237 237 GLU GLU A . n A 1 109 ALA 109 238 238 ALA ALA A . n A 1 110 GLY 110 239 239 GLY GLY A . n A 1 111 ALA 111 240 240 ALA ALA A . n A 1 112 HIS 112 241 241 HIS HIS A . n A 1 113 ILE 113 242 242 ILE ILE A . n A 1 114 CYS 114 243 243 CYS CYS A . n A 1 115 ALA 115 244 244 ALA ALA A . n A 1 116 TRP 116 245 245 TRP TRP A . n A 1 117 LYS 117 246 246 LYS LYS A . n A 1 118 GLN 118 247 247 GLN GLN A . n A 1 119 HIS 119 248 248 HIS HIS A . n A 1 120 GLY 120 249 249 GLY GLY A . n A 1 121 GLY 121 250 250 GLY GLY A . n A 1 122 PRO 122 251 251 PRO PRO A . n A 1 123 ASN 123 252 252 ASN ASN A . n A 1 124 GLN 124 253 253 GLN GLN A . n A 1 125 LYS 125 254 254 LYS LYS A . n A 1 126 PHE 126 255 255 PHE PHE A . n A 1 127 ILE 127 256 256 ILE ILE A . n A 1 128 ILE 128 257 257 ILE ILE A . n A 1 129 GLU 129 258 258 GLU GLU A . n A 1 130 SER 130 259 259 SER SER A . n A 1 131 GLU 131 260 260 GLU GLU A . n B 1 1 LYS 1 130 130 LYS LYS B . n B 1 2 PRO 2 131 131 PRO PRO B . n B 1 3 LYS 3 132 132 LYS LYS B . n B 1 4 PHE 4 133 133 PHE PHE B . n B 1 5 PHE 5 134 134 PHE PHE B . n B 1 6 TYR 6 135 135 TYR TYR B . n B 1 7 ILE 7 136 136 ILE ILE B . n B 1 8 LYS 8 137 137 LYS LYS B . n B 1 9 SER 9 138 138 SER SER B . n B 1 10 GLU 10 139 139 GLU GLU B . n B 1 11 LEU 11 140 140 LEU LEU B . n B 1 12 ASN 12 141 141 ASN ASN B . n B 1 13 GLY 13 142 142 GLY GLY B . n B 1 14 LYS 14 143 143 LYS LYS B . n B 1 15 VAL 15 144 144 VAL VAL B . n B 1 16 LEU 16 145 145 LEU LEU B . n B 1 17 ASP 17 146 146 ASP ASP B . n B 1 18 ILE 18 147 147 ILE ILE B . n B 1 19 GLU 19 148 148 GLU GLU B . n B 1 20 GLY 20 149 149 GLY GLY B . n B 1 21 GLN 21 150 150 GLN GLN B . n B 1 22 ASN 22 151 151 ASN ASN B . n B 1 23 PRO 23 152 152 PRO PRO B . n B 1 24 ALA 24 153 153 ALA ALA B . n B 1 25 PRO 25 154 154 PRO PRO B . n B 1 26 GLY 26 155 155 GLY GLY B . n B 1 27 SER 27 156 156 SER SER B . n B 1 28 LYS 28 157 157 LYS LYS B . n B 1 29 ILE 29 158 158 ILE ILE B . n B 1 30 ILE 30 159 159 ILE ILE B . n B 1 31 THR 31 160 160 THR THR B . n B 1 32 TRP 32 161 161 TRP TRP B . n B 1 33 ASP 33 162 162 ASP ASP B . n B 1 34 GLN 34 163 163 GLN GLN B . n B 1 35 LYS 35 164 164 LYS LYS B . n B 1 36 LYS 36 165 165 LYS LYS B . n B 1 37 GLY 37 166 166 GLY GLY B . n B 1 38 PRO 38 167 167 PRO PRO B . n B 1 39 THR 39 168 168 THR THR B . n B 1 40 ALA 40 169 169 ALA ALA B . n B 1 41 VAL 41 170 170 VAL VAL B . n B 1 42 ASN 42 171 171 ASN ASN B . n B 1 43 GLN 43 172 172 GLN GLN B . n B 1 44 LEU 44 173 173 LEU LEU B . n B 1 45 TRP 45 174 174 TRP TRP B . n B 1 46 TYR 46 175 175 TYR TYR B . n B 1 47 THR 47 176 176 THR THR B . n B 1 48 ASP 48 177 177 ASP ASP B . n B 1 49 GLN 49 178 178 GLN GLN B . n B 1 50 GLN 50 179 179 GLN GLN B . n B 1 51 GLY 51 180 180 GLY GLY B . n B 1 52 VAL 52 181 181 VAL VAL B . n B 1 53 ILE 53 182 182 ILE ILE B . n B 1 54 ARG 54 183 183 ARG ARG B . n B 1 55 SER 55 184 184 SER SER B . n B 1 56 LYS 56 185 185 LYS LYS B . n B 1 57 LEU 57 186 186 LEU LEU B . n B 1 58 ASN 58 187 187 ASN ASN B . n B 1 59 ASP 59 188 188 ASP ASP B . n B 1 60 PHE 60 189 189 PHE PHE B . n B 1 61 ALA 61 190 190 ALA ALA B . n B 1 62 ILE 62 191 191 ILE ILE B . n B 1 63 ASP 63 192 192 ASP ASP B . n B 1 64 ALA 64 193 193 ALA ALA B . n B 1 65 SER 65 194 194 SER SER B . n B 1 66 HIS 66 195 195 HIS HIS B . n B 1 67 GLU 67 196 196 GLU GLU B . n B 1 68 GLN 68 197 197 GLN GLN B . n B 1 69 ILE 69 198 198 ILE ILE B . n B 1 70 GLU 70 199 199 GLU GLU B . n B 1 71 THR 71 200 200 THR THR B . n B 1 72 GLN 72 201 201 GLN GLN B . n B 1 73 PRO 73 202 202 PRO PRO B . n B 1 74 PHE 74 203 203 PHE PHE B . n B 1 75 ASP 75 204 204 ASP ASP B . n B 1 76 PRO 76 205 205 PRO PRO B . n B 1 77 ASN 77 206 206 ASN ASN B . n B 1 78 ASN 78 207 207 ASN ASN B . n B 1 79 PRO 79 208 208 PRO PRO B . n B 1 80 LYS 80 209 209 LYS LYS B . n B 1 81 ARG 81 210 210 ARG ARG B . n B 1 82 ALA 82 211 211 ALA ALA B . n B 1 83 TRP 83 212 212 TRP TRP B . n B 1 84 ILE 84 213 213 ILE ILE B . n B 1 85 VAL 85 214 214 VAL VAL B . n B 1 86 SER 86 215 215 SER SER B . n B 1 87 GLY 87 216 216 GLY GLY B . n B 1 88 ASN 88 217 217 ASN ASN B . n B 1 89 THR 89 218 218 THR THR B . n B 1 90 ILE 90 219 219 ILE ILE B . n B 1 91 ALA 91 220 220 ALA ALA B . n B 1 92 GLN 92 221 221 GLN GLN B . n B 1 93 LEU 93 222 222 LEU LEU B . n B 1 94 SER 94 223 223 SER SER B . n B 1 95 ASP 95 224 224 ASP ASP B . n B 1 96 ARG 96 225 225 ARG ARG B . n B 1 97 ASP 97 226 226 ASP ASP B . n B 1 98 ILE 98 227 227 ILE ILE B . n B 1 99 VAL 99 228 228 VAL VAL B . n B 1 100 LEU 100 229 229 LEU LEU B . n B 1 101 ASP 101 230 230 ASP ASP B . n B 1 102 ILE 102 231 231 ILE ILE B . n B 1 103 ILE 103 232 232 ILE ILE B . n B 1 104 LYS 104 233 233 LYS LYS B . n B 1 105 SER 105 234 234 SER SER B . n B 1 106 ASP 106 235 235 ASP ASP B . n B 1 107 LYS 107 236 236 LYS LYS B . n B 1 108 GLU 108 237 237 GLU GLU B . n B 1 109 ALA 109 238 238 ALA ALA B . n B 1 110 GLY 110 239 239 GLY GLY B . n B 1 111 ALA 111 240 240 ALA ALA B . n B 1 112 HIS 112 241 241 HIS HIS B . n B 1 113 ILE 113 242 242 ILE ILE B . n B 1 114 CYS 114 243 243 CYS CYS B . n B 1 115 ALA 115 244 244 ALA ALA B . n B 1 116 TRP 116 245 245 TRP TRP B . n B 1 117 LYS 117 246 246 LYS LYS B . n B 1 118 GLN 118 247 247 GLN GLN B . n B 1 119 HIS 119 248 248 HIS HIS B . n B 1 120 GLY 120 249 249 GLY GLY B . n B 1 121 GLY 121 250 250 GLY GLY B . n B 1 122 PRO 122 251 251 PRO PRO B . n B 1 123 ASN 123 252 252 ASN ASN B . n B 1 124 GLN 124 253 253 GLN GLN B . n B 1 125 LYS 125 254 254 LYS LYS B . n B 1 126 PHE 126 255 255 PHE PHE B . n B 1 127 ILE 127 256 256 ILE ILE B . n B 1 128 ILE 128 257 257 ILE ILE B . n B 1 129 GLU 129 258 258 GLU GLU B . n B 1 130 SER 130 259 259 SER SER B . n B 1 131 GLU 131 260 260 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 PO4 1 401 401 PO4 PO4 A . H 3 PO4 1 402 402 PO4 PO4 A . I 4 IMD 1 421 421 IMD IMD A . J 4 IMD 1 422 422 IMD IMD A . K 5 HOH 1 423 3 HOH HOH A . K 5 HOH 2 424 4 HOH HOH A . K 5 HOH 3 425 7 HOH HOH A . K 5 HOH 4 426 9 HOH HOH A . K 5 HOH 5 427 10 HOH HOH A . K 5 HOH 6 428 11 HOH HOH A . K 5 HOH 7 429 15 HOH HOH A . K 5 HOH 8 430 17 HOH HOH A . K 5 HOH 9 431 23 HOH HOH A . K 5 HOH 10 432 24 HOH HOH A . K 5 HOH 11 433 25 HOH HOH A . K 5 HOH 12 434 29 HOH HOH A . K 5 HOH 13 435 31 HOH HOH A . K 5 HOH 14 436 33 HOH HOH A . K 5 HOH 15 437 35 HOH HOH A . K 5 HOH 16 438 36 HOH HOH A . K 5 HOH 17 439 38 HOH HOH A . K 5 HOH 18 440 39 HOH HOH A . K 5 HOH 19 441 40 HOH HOH A . K 5 HOH 20 442 42 HOH HOH A . K 5 HOH 21 443 46 HOH HOH A . K 5 HOH 22 444 49 HOH HOH A . K 5 HOH 23 445 52 HOH HOH A . K 5 HOH 24 446 54 HOH HOH A . K 5 HOH 25 447 55 HOH HOH A . K 5 HOH 26 448 58 HOH HOH A . K 5 HOH 27 449 60 HOH HOH A . K 5 HOH 28 450 62 HOH HOH A . K 5 HOH 29 451 67 HOH HOH A . K 5 HOH 30 452 69 HOH HOH A . K 5 HOH 31 453 70 HOH HOH A . K 5 HOH 32 454 71 HOH HOH A . K 5 HOH 33 455 72 HOH HOH A . K 5 HOH 34 456 73 HOH HOH A . K 5 HOH 35 457 75 HOH HOH A . K 5 HOH 36 458 76 HOH HOH A . K 5 HOH 37 459 78 HOH HOH A . K 5 HOH 38 460 79 HOH HOH A . K 5 HOH 39 461 81 HOH HOH A . K 5 HOH 40 462 82 HOH HOH A . K 5 HOH 41 463 83 HOH HOH A . K 5 HOH 42 464 84 HOH HOH A . K 5 HOH 43 465 88 HOH HOH A . K 5 HOH 44 466 90 HOH HOH A . K 5 HOH 45 467 91 HOH HOH A . K 5 HOH 46 468 92 HOH HOH A . K 5 HOH 47 469 95 HOH HOH A . K 5 HOH 48 470 96 HOH HOH A . K 5 HOH 49 471 97 HOH HOH A . K 5 HOH 50 472 100 HOH HOH A . K 5 HOH 51 473 101 HOH HOH A . K 5 HOH 52 474 103 HOH HOH A . K 5 HOH 53 475 107 HOH HOH A . K 5 HOH 54 476 109 HOH HOH A . K 5 HOH 55 477 110 HOH HOH A . K 5 HOH 56 478 111 HOH HOH A . K 5 HOH 57 479 112 HOH HOH A . K 5 HOH 58 480 120 HOH HOH A . K 5 HOH 59 481 121 HOH HOH A . K 5 HOH 60 482 122 HOH HOH A . K 5 HOH 61 483 124 HOH HOH A . K 5 HOH 62 484 127 HOH HOH A . K 5 HOH 63 485 128 HOH HOH A . K 5 HOH 64 486 129 HOH HOH A . K 5 HOH 65 487 131 HOH HOH A . K 5 HOH 66 488 132 HOH HOH A . K 5 HOH 67 489 136 HOH HOH A . K 5 HOH 68 490 138 HOH HOH A . K 5 HOH 69 491 141 HOH HOH A . K 5 HOH 70 492 142 HOH HOH A . K 5 HOH 71 493 145 HOH HOH A . K 5 HOH 72 494 146 HOH HOH A . K 5 HOH 73 495 147 HOH HOH A . K 5 HOH 74 496 148 HOH HOH A . K 5 HOH 75 497 149 HOH HOH A . K 5 HOH 76 498 158 HOH HOH A . K 5 HOH 77 499 161 HOH HOH A . K 5 HOH 78 500 162 HOH HOH A . K 5 HOH 79 501 164 HOH HOH A . K 5 HOH 80 502 165 HOH HOH A . K 5 HOH 81 503 166 HOH HOH A . K 5 HOH 82 504 168 HOH HOH A . K 5 HOH 83 505 169 HOH HOH A . K 5 HOH 84 506 170 HOH HOH A . K 5 HOH 85 507 174 HOH HOH A . K 5 HOH 86 508 176 HOH HOH A . K 5 HOH 87 509 178 HOH HOH A . K 5 HOH 88 510 179 HOH HOH A . K 5 HOH 89 511 180 HOH HOH A . K 5 HOH 90 512 181 HOH HOH A . K 5 HOH 91 513 182 HOH HOH A . K 5 HOH 92 514 184 HOH HOH A . K 5 HOH 93 515 185 HOH HOH A . K 5 HOH 94 516 187 HOH HOH A . K 5 HOH 95 517 188 HOH HOH A . K 5 HOH 96 518 189 HOH HOH A . K 5 HOH 97 519 191 HOH HOH A . K 5 HOH 98 520 193 HOH HOH A . K 5 HOH 99 521 195 HOH HOH A . K 5 HOH 100 522 196 HOH HOH A . K 5 HOH 101 523 198 HOH HOH A . K 5 HOH 102 524 199 HOH HOH A . K 5 HOH 103 525 200 HOH HOH A . K 5 HOH 104 526 202 HOH HOH A . K 5 HOH 105 527 203 HOH HOH A . K 5 HOH 106 528 205 HOH HOH A . K 5 HOH 107 529 207 HOH HOH A . K 5 HOH 108 530 208 HOH HOH A . K 5 HOH 109 531 211 HOH HOH A . K 5 HOH 110 532 213 HOH HOH A . K 5 HOH 111 533 215 HOH HOH A . K 5 HOH 112 534 218 HOH HOH A . K 5 HOH 113 535 220 HOH HOH A . K 5 HOH 114 536 222 HOH HOH A . K 5 HOH 115 537 223 HOH HOH A . K 5 HOH 116 538 225 HOH HOH A . K 5 HOH 117 539 226 HOH HOH A . K 5 HOH 118 540 227 HOH HOH A . K 5 HOH 119 541 228 HOH HOH A . K 5 HOH 120 542 229 HOH HOH A . K 5 HOH 121 543 232 HOH HOH A . K 5 HOH 122 544 240 HOH HOH A . K 5 HOH 123 545 241 HOH HOH A . K 5 HOH 124 546 243 HOH HOH A . K 5 HOH 125 547 245 HOH HOH A . K 5 HOH 126 548 246 HOH HOH A . K 5 HOH 127 549 250 HOH HOH A . K 5 HOH 128 550 251 HOH HOH A . K 5 HOH 129 551 253 HOH HOH A . K 5 HOH 130 552 255 HOH HOH A . K 5 HOH 131 553 256 HOH HOH A . K 5 HOH 132 554 257 HOH HOH A . K 5 HOH 133 555 261 HOH HOH A . K 5 HOH 134 556 262 HOH HOH A . K 5 HOH 135 557 265 HOH HOH A . K 5 HOH 136 558 275 HOH HOH A . K 5 HOH 137 559 277 HOH HOH A . K 5 HOH 138 560 278 HOH HOH A . K 5 HOH 139 561 280 HOH HOH A . K 5 HOH 140 562 283 HOH HOH A . K 5 HOH 141 563 284 HOH HOH A . K 5 HOH 142 564 285 HOH HOH A . L 5 HOH 1 333 1 HOH HOH B . L 5 HOH 2 334 2 HOH HOH B . L 5 HOH 3 335 5 HOH HOH B . L 5 HOH 4 336 6 HOH HOH B . L 5 HOH 5 337 8 HOH HOH B . L 5 HOH 6 338 12 HOH HOH B . L 5 HOH 7 339 13 HOH HOH B . L 5 HOH 8 340 14 HOH HOH B . L 5 HOH 9 341 16 HOH HOH B . L 5 HOH 10 342 18 HOH HOH B . L 5 HOH 11 343 19 HOH HOH B . L 5 HOH 12 344 20 HOH HOH B . L 5 HOH 13 345 21 HOH HOH B . L 5 HOH 14 346 22 HOH HOH B . L 5 HOH 15 347 26 HOH HOH B . L 5 HOH 16 348 27 HOH HOH B . L 5 HOH 17 349 28 HOH HOH B . L 5 HOH 18 350 30 HOH HOH B . L 5 HOH 19 351 32 HOH HOH B . L 5 HOH 20 352 34 HOH HOH B . L 5 HOH 21 353 37 HOH HOH B . L 5 HOH 22 354 41 HOH HOH B . L 5 HOH 23 355 43 HOH HOH B . L 5 HOH 24 356 44 HOH HOH B . L 5 HOH 25 357 45 HOH HOH B . L 5 HOH 26 358 47 HOH HOH B . L 5 HOH 27 359 48 HOH HOH B . L 5 HOH 28 360 50 HOH HOH B . L 5 HOH 29 361 51 HOH HOH B . L 5 HOH 30 362 53 HOH HOH B . L 5 HOH 31 363 56 HOH HOH B . L 5 HOH 32 364 57 HOH HOH B . L 5 HOH 33 365 59 HOH HOH B . L 5 HOH 34 366 61 HOH HOH B . L 5 HOH 35 367 63 HOH HOH B . L 5 HOH 36 368 64 HOH HOH B . L 5 HOH 37 369 65 HOH HOH B . L 5 HOH 38 370 66 HOH HOH B . L 5 HOH 39 371 68 HOH HOH B . L 5 HOH 40 372 74 HOH HOH B . L 5 HOH 41 373 77 HOH HOH B . L 5 HOH 42 374 80 HOH HOH B . L 5 HOH 43 375 85 HOH HOH B . L 5 HOH 44 376 86 HOH HOH B . L 5 HOH 45 377 87 HOH HOH B . L 5 HOH 46 378 89 HOH HOH B . L 5 HOH 47 379 93 HOH HOH B . L 5 HOH 48 380 94 HOH HOH B . L 5 HOH 49 381 98 HOH HOH B . L 5 HOH 50 382 99 HOH HOH B . L 5 HOH 51 383 102 HOH HOH B . L 5 HOH 52 384 104 HOH HOH B . L 5 HOH 53 385 105 HOH HOH B . L 5 HOH 54 386 106 HOH HOH B . L 5 HOH 55 387 108 HOH HOH B . L 5 HOH 56 388 113 HOH HOH B . L 5 HOH 57 389 114 HOH HOH B . L 5 HOH 58 390 115 HOH HOH B . L 5 HOH 59 391 116 HOH HOH B . L 5 HOH 60 392 117 HOH HOH B . L 5 HOH 61 393 118 HOH HOH B . L 5 HOH 62 394 119 HOH HOH B . L 5 HOH 63 395 123 HOH HOH B . L 5 HOH 64 396 125 HOH HOH B . L 5 HOH 65 397 126 HOH HOH B . L 5 HOH 66 398 130 HOH HOH B . L 5 HOH 67 399 133 HOH HOH B . L 5 HOH 68 400 134 HOH HOH B . L 5 HOH 69 401 135 HOH HOH B . L 5 HOH 70 402 137 HOH HOH B . L 5 HOH 71 403 139 HOH HOH B . L 5 HOH 72 404 140 HOH HOH B . L 5 HOH 73 405 143 HOH HOH B . L 5 HOH 74 406 144 HOH HOH B . L 5 HOH 75 407 150 HOH HOH B . L 5 HOH 76 408 151 HOH HOH B . L 5 HOH 77 409 152 HOH HOH B . L 5 HOH 78 410 153 HOH HOH B . L 5 HOH 79 411 154 HOH HOH B . L 5 HOH 80 412 155 HOH HOH B . L 5 HOH 81 413 156 HOH HOH B . L 5 HOH 82 414 157 HOH HOH B . L 5 HOH 83 415 159 HOH HOH B . L 5 HOH 84 416 160 HOH HOH B . L 5 HOH 85 417 163 HOH HOH B . L 5 HOH 86 418 167 HOH HOH B . L 5 HOH 87 419 171 HOH HOH B . L 5 HOH 88 420 172 HOH HOH B . L 5 HOH 89 421 173 HOH HOH B . L 5 HOH 90 422 175 HOH HOH B . L 5 HOH 91 423 177 HOH HOH B . L 5 HOH 92 424 183 HOH HOH B . L 5 HOH 93 425 186 HOH HOH B . L 5 HOH 94 426 190 HOH HOH B . L 5 HOH 95 427 192 HOH HOH B . L 5 HOH 96 428 194 HOH HOH B . L 5 HOH 97 429 197 HOH HOH B . L 5 HOH 98 430 201 HOH HOH B . L 5 HOH 99 431 204 HOH HOH B . L 5 HOH 100 432 206 HOH HOH B . L 5 HOH 101 433 209 HOH HOH B . L 5 HOH 102 434 210 HOH HOH B . L 5 HOH 103 435 212 HOH HOH B . L 5 HOH 104 436 214 HOH HOH B . L 5 HOH 105 437 216 HOH HOH B . L 5 HOH 106 438 217 HOH HOH B . L 5 HOH 107 439 219 HOH HOH B . L 5 HOH 108 440 221 HOH HOH B . L 5 HOH 109 441 224 HOH HOH B . L 5 HOH 110 442 230 HOH HOH B . L 5 HOH 111 443 231 HOH HOH B . L 5 HOH 112 444 233 HOH HOH B . L 5 HOH 113 445 234 HOH HOH B . L 5 HOH 114 446 235 HOH HOH B . L 5 HOH 115 447 236 HOH HOH B . L 5 HOH 116 448 237 HOH HOH B . L 5 HOH 117 449 238 HOH HOH B . L 5 HOH 118 450 239 HOH HOH B . L 5 HOH 119 451 242 HOH HOH B . L 5 HOH 120 452 244 HOH HOH B . L 5 HOH 121 453 247 HOH HOH B . L 5 HOH 122 454 248 HOH HOH B . L 5 HOH 123 455 249 HOH HOH B . L 5 HOH 124 456 252 HOH HOH B . L 5 HOH 125 457 254 HOH HOH B . L 5 HOH 126 458 258 HOH HOH B . L 5 HOH 127 459 259 HOH HOH B . L 5 HOH 128 460 260 HOH HOH B . L 5 HOH 129 461 263 HOH HOH B . L 5 HOH 130 462 264 HOH HOH B . L 5 HOH 131 463 266 HOH HOH B . L 5 HOH 132 464 267 HOH HOH B . L 5 HOH 133 465 268 HOH HOH B . L 5 HOH 134 466 269 HOH HOH B . L 5 HOH 135 467 270 HOH HOH B . L 5 HOH 136 468 271 HOH HOH B . L 5 HOH 137 469 272 HOH HOH B . L 5 HOH 138 470 273 HOH HOH B . L 5 HOH 139 471 274 HOH HOH B . L 5 HOH 140 472 276 HOH HOH B . L 5 HOH 141 473 279 HOH HOH B . L 5 HOH 142 474 281 HOH HOH B . L 5 HOH 143 475 282 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900004 _pdbx_molecule_features.name beta-lactose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900004 C 2 PRD_900004 D 3 PRD_900004 E 4 PRD_900004 F # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G,H,I,J,K 2 1 B,E,F,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 437 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id L _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' entity_name_com 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_molecule_features 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_struct_special_symmetry 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen 20 4 'Structure model' chem_comp 21 4 'Structure model' chem_comp_atom 22 4 'Structure model' chem_comp_bond 23 4 'Structure model' database_2 24 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 24 4 'Structure model' '_chem_comp.pdbx_synonyms' 25 4 'Structure model' '_database_2.pdbx_DOI' 26 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 MOLREP phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 141 ? ? -150.37 4.75 2 1 ASN B 217 ? ? -93.44 36.30 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BGC C2 C N R 74 BGC C3 C N S 75 BGC C4 C N S 76 BGC C5 C N R 77 BGC C6 C N N 78 BGC C1 C N R 79 BGC O1 O N N 80 BGC O2 O N N 81 BGC O3 O N N 82 BGC O4 O N N 83 BGC O5 O N N 84 BGC O6 O N N 85 BGC H2 H N N 86 BGC H3 H N N 87 BGC H4 H N N 88 BGC H5 H N N 89 BGC H61 H N N 90 BGC H62 H N N 91 BGC H1 H N N 92 BGC HO1 H N N 93 BGC HO2 H N N 94 BGC HO3 H N N 95 BGC HO4 H N N 96 BGC HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GAL C1 C N R 112 GAL C2 C N R 113 GAL C3 C N S 114 GAL C4 C N R 115 GAL C5 C N R 116 GAL C6 C N N 117 GAL O1 O N N 118 GAL O2 O N N 119 GAL O3 O N N 120 GAL O4 O N N 121 GAL O5 O N N 122 GAL O6 O N N 123 GAL H1 H N N 124 GAL H2 H N N 125 GAL H3 H N N 126 GAL H4 H N N 127 GAL H5 H N N 128 GAL H61 H N N 129 GAL H62 H N N 130 GAL HO1 H N N 131 GAL HO2 H N N 132 GAL HO3 H N N 133 GAL HO4 H N N 134 GAL HO6 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 IMD N1 N Y N 231 IMD C2 C Y N 232 IMD N3 N Y N 233 IMD C4 C Y N 234 IMD C5 C Y N 235 IMD HN1 H N N 236 IMD H2 H N N 237 IMD HN3 H N N 238 IMD H4 H N N 239 IMD H5 H N N 240 LEU N N N N 241 LEU CA C N S 242 LEU C C N N 243 LEU O O N N 244 LEU CB C N N 245 LEU CG C N N 246 LEU CD1 C N N 247 LEU CD2 C N N 248 LEU OXT O N N 249 LEU H H N N 250 LEU H2 H N N 251 LEU HA H N N 252 LEU HB2 H N N 253 LEU HB3 H N N 254 LEU HG H N N 255 LEU HD11 H N N 256 LEU HD12 H N N 257 LEU HD13 H N N 258 LEU HD21 H N N 259 LEU HD22 H N N 260 LEU HD23 H N N 261 LEU HXT H N N 262 LYS N N N N 263 LYS CA C N S 264 LYS C C N N 265 LYS O O N N 266 LYS CB C N N 267 LYS CG C N N 268 LYS CD C N N 269 LYS CE C N N 270 LYS NZ N N N 271 LYS OXT O N N 272 LYS H H N N 273 LYS H2 H N N 274 LYS HA H N N 275 LYS HB2 H N N 276 LYS HB3 H N N 277 LYS HG2 H N N 278 LYS HG3 H N N 279 LYS HD2 H N N 280 LYS HD3 H N N 281 LYS HE2 H N N 282 LYS HE3 H N N 283 LYS HZ1 H N N 284 LYS HZ2 H N N 285 LYS HZ3 H N N 286 LYS HXT H N N 287 PHE N N N N 288 PHE CA C N S 289 PHE C C N N 290 PHE O O N N 291 PHE CB C N N 292 PHE CG C Y N 293 PHE CD1 C Y N 294 PHE CD2 C Y N 295 PHE CE1 C Y N 296 PHE CE2 C Y N 297 PHE CZ C Y N 298 PHE OXT O N N 299 PHE H H N N 300 PHE H2 H N N 301 PHE HA H N N 302 PHE HB2 H N N 303 PHE HB3 H N N 304 PHE HD1 H N N 305 PHE HD2 H N N 306 PHE HE1 H N N 307 PHE HE2 H N N 308 PHE HZ H N N 309 PHE HXT H N N 310 PO4 P P N N 311 PO4 O1 O N N 312 PO4 O2 O N N 313 PO4 O3 O N N 314 PO4 O4 O N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BGC C2 C3 sing N N 70 BGC C2 C1 sing N N 71 BGC C2 O2 sing N N 72 BGC C2 H2 sing N N 73 BGC C3 C4 sing N N 74 BGC C3 O3 sing N N 75 BGC C3 H3 sing N N 76 BGC C4 C5 sing N N 77 BGC C4 O4 sing N N 78 BGC C4 H4 sing N N 79 BGC C5 C6 sing N N 80 BGC C5 O5 sing N N 81 BGC C5 H5 sing N N 82 BGC C6 O6 sing N N 83 BGC C6 H61 sing N N 84 BGC C6 H62 sing N N 85 BGC C1 O1 sing N N 86 BGC C1 O5 sing N N 87 BGC C1 H1 sing N N 88 BGC O1 HO1 sing N N 89 BGC O2 HO2 sing N N 90 BGC O3 HO3 sing N N 91 BGC O4 HO4 sing N N 92 BGC O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GAL C1 C2 sing N N 107 GAL C1 O1 sing N N 108 GAL C1 O5 sing N N 109 GAL C1 H1 sing N N 110 GAL C2 C3 sing N N 111 GAL C2 O2 sing N N 112 GAL C2 H2 sing N N 113 GAL C3 C4 sing N N 114 GAL C3 O3 sing N N 115 GAL C3 H3 sing N N 116 GAL C4 C5 sing N N 117 GAL C4 O4 sing N N 118 GAL C4 H4 sing N N 119 GAL C5 C6 sing N N 120 GAL C5 O5 sing N N 121 GAL C5 H5 sing N N 122 GAL C6 O6 sing N N 123 GAL C6 H61 sing N N 124 GAL C6 H62 sing N N 125 GAL O1 HO1 sing N N 126 GAL O2 HO2 sing N N 127 GAL O3 HO3 sing N N 128 GAL O4 HO4 sing N N 129 GAL O6 HO6 sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 IMD N1 C2 sing Y N 221 IMD N1 C5 sing Y N 222 IMD N1 HN1 sing N N 223 IMD C2 N3 doub Y N 224 IMD C2 H2 sing N N 225 IMD N3 C4 sing Y N 226 IMD N3 HN3 sing N N 227 IMD C4 C5 doub Y N 228 IMD C4 H4 sing N N 229 IMD C5 H5 sing N N 230 LEU N CA sing N N 231 LEU N H sing N N 232 LEU N H2 sing N N 233 LEU CA C sing N N 234 LEU CA CB sing N N 235 LEU CA HA sing N N 236 LEU C O doub N N 237 LEU C OXT sing N N 238 LEU CB CG sing N N 239 LEU CB HB2 sing N N 240 LEU CB HB3 sing N N 241 LEU CG CD1 sing N N 242 LEU CG CD2 sing N N 243 LEU CG HG sing N N 244 LEU CD1 HD11 sing N N 245 LEU CD1 HD12 sing N N 246 LEU CD1 HD13 sing N N 247 LEU CD2 HD21 sing N N 248 LEU CD2 HD22 sing N N 249 LEU CD2 HD23 sing N N 250 LEU OXT HXT sing N N 251 LYS N CA sing N N 252 LYS N H sing N N 253 LYS N H2 sing N N 254 LYS CA C sing N N 255 LYS CA CB sing N N 256 LYS CA HA sing N N 257 LYS C O doub N N 258 LYS C OXT sing N N 259 LYS CB CG sing N N 260 LYS CB HB2 sing N N 261 LYS CB HB3 sing N N 262 LYS CG CD sing N N 263 LYS CG HG2 sing N N 264 LYS CG HG3 sing N N 265 LYS CD CE sing N N 266 LYS CD HD2 sing N N 267 LYS CD HD3 sing N N 268 LYS CE NZ sing N N 269 LYS CE HE2 sing N N 270 LYS CE HE3 sing N N 271 LYS NZ HZ1 sing N N 272 LYS NZ HZ2 sing N N 273 LYS NZ HZ3 sing N N 274 LYS OXT HXT sing N N 275 PHE N CA sing N N 276 PHE N H sing N N 277 PHE N H2 sing N N 278 PHE CA C sing N N 279 PHE CA CB sing N N 280 PHE CA HA sing N N 281 PHE C O doub N N 282 PHE C OXT sing N N 283 PHE CB CG sing N N 284 PHE CB HB2 sing N N 285 PHE CB HB3 sing N N 286 PHE CG CD1 doub Y N 287 PHE CG CD2 sing Y N 288 PHE CD1 CE1 sing Y N 289 PHE CD1 HD1 sing N N 290 PHE CD2 CE2 doub Y N 291 PHE CD2 HD2 sing N N 292 PHE CE1 CZ doub Y N 293 PHE CE1 HE1 sing N N 294 PHE CE2 CZ sing Y N 295 PHE CE2 HE2 sing N N 296 PHE CZ HZ sing N N 297 PHE OXT HXT sing N N 298 PO4 P O1 doub N N 299 PO4 P O2 sing N N 300 PO4 P O3 sing N N 301 PO4 P O4 sing N N 302 PRO N CA sing N N 303 PRO N CD sing N N 304 PRO N H sing N N 305 PRO CA C sing N N 306 PRO CA CB sing N N 307 PRO CA HA sing N N 308 PRO C O doub N N 309 PRO C OXT sing N N 310 PRO CB CG sing N N 311 PRO CB HB2 sing N N 312 PRO CB HB3 sing N N 313 PRO CG CD sing N N 314 PRO CG HG2 sing N N 315 PRO CG HG3 sing N N 316 PRO CD HD2 sing N N 317 PRO CD HD3 sing N N 318 PRO OXT HXT sing N N 319 SER N CA sing N N 320 SER N H sing N N 321 SER N H2 sing N N 322 SER CA C sing N N 323 SER CA CB sing N N 324 SER CA HA sing N N 325 SER C O doub N N 326 SER C OXT sing N N 327 SER CB OG sing N N 328 SER CB HB2 sing N N 329 SER CB HB3 sing N N 330 SER OG HG sing N N 331 SER OXT HXT sing N N 332 THR N CA sing N N 333 THR N H sing N N 334 THR N H2 sing N N 335 THR CA C sing N N 336 THR CA CB sing N N 337 THR CA HA sing N N 338 THR C O doub N N 339 THR C OXT sing N N 340 THR CB OG1 sing N N 341 THR CB CG2 sing N N 342 THR CB HB sing N N 343 THR OG1 HG1 sing N N 344 THR CG2 HG21 sing N N 345 THR CG2 HG22 sing N N 346 THR CG2 HG23 sing N N 347 THR OXT HXT sing N N 348 TRP N CA sing N N 349 TRP N H sing N N 350 TRP N H2 sing N N 351 TRP CA C sing N N 352 TRP CA CB sing N N 353 TRP CA HA sing N N 354 TRP C O doub N N 355 TRP C OXT sing N N 356 TRP CB CG sing N N 357 TRP CB HB2 sing N N 358 TRP CB HB3 sing N N 359 TRP CG CD1 doub Y N 360 TRP CG CD2 sing Y N 361 TRP CD1 NE1 sing Y N 362 TRP CD1 HD1 sing N N 363 TRP CD2 CE2 doub Y N 364 TRP CD2 CE3 sing Y N 365 TRP NE1 CE2 sing Y N 366 TRP NE1 HE1 sing N N 367 TRP CE2 CZ2 sing Y N 368 TRP CE3 CZ3 doub Y N 369 TRP CE3 HE3 sing N N 370 TRP CZ2 CH2 doub Y N 371 TRP CZ2 HZ2 sing N N 372 TRP CZ3 CH2 sing Y N 373 TRP CZ3 HZ3 sing N N 374 TRP CH2 HH2 sing N N 375 TRP OXT HXT sing N N 376 TYR N CA sing N N 377 TYR N H sing N N 378 TYR N H2 sing N N 379 TYR CA C sing N N 380 TYR CA CB sing N N 381 TYR CA HA sing N N 382 TYR C O doub N N 383 TYR C OXT sing N N 384 TYR CB CG sing N N 385 TYR CB HB2 sing N N 386 TYR CB HB3 sing N N 387 TYR CG CD1 doub Y N 388 TYR CG CD2 sing Y N 389 TYR CD1 CE1 sing Y N 390 TYR CD1 HD1 sing N N 391 TYR CD2 CE2 doub Y N 392 TYR CD2 HD2 sing N N 393 TYR CE1 CZ doub Y N 394 TYR CE1 HE1 sing N N 395 TYR CE2 CZ sing Y N 396 TYR CE2 HE2 sing N N 397 TYR CZ OH sing N N 398 TYR OH HH sing N N 399 TYR OXT HXT sing N N 400 VAL N CA sing N N 401 VAL N H sing N N 402 VAL N H2 sing N N 403 VAL CA C sing N N 404 VAL CA CB sing N N 405 VAL CA HA sing N N 406 VAL C O doub N N 407 VAL C OXT sing N N 408 VAL CB CG1 sing N N 409 VAL CB CG2 sing N N 410 VAL CB HB sing N N 411 VAL CG1 HG11 sing N N 412 VAL CG1 HG12 sing N N 413 VAL CG1 HG13 sing N N 414 VAL CG2 HG21 sing N N 415 VAL CG2 HG22 sing N N 416 VAL CG2 HG23 sing N N 417 VAL OXT HXT sing N N 418 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 BGC 1 C BGC 1 C GLC 301 n C 2 GAL 2 C GAL 2 C GAL 302 n D 2 BGC 1 D BGC 1 C GLC 311 n D 2 GAL 2 D GAL 2 C GAL 312 n E 2 BGC 1 E BGC 1 D GLC 321 n E 2 GAL 2 E GAL 2 D GAL 322 n F 2 BGC 1 F BGC 1 D GLC 331 n F 2 GAL 2 F GAL 2 D GAL 332 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Glcp]{[(4+1)][b-D-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BGC 1 n 2 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHATE ION' PO4 4 IMIDAZOLE IMD 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1XYF _pdbx_initial_refinement_model.details 'PDB ENTRY 1XYF' #