data_2ZV7 # _entry.id 2ZV7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZV7 pdb_00002zv7 10.2210/pdb2zv7/pdb RCSB RCSB028466 ? ? WWPDB D_1000028466 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ZV8 'Lyn Protein Tyrosine Kinase Domain-AMP-PNP complex' unspecified PDB 2ZV9 'Lyn Protein Tyrosine Kinase Domain-PP2 complex' unspecified PDB 2ZVA 'Lyn Protein Tyrosine Kinase Domain-Dasatinib complex' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZV7 _pdbx_database_status.recvd_initial_deposition_date 2008-11-04 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Williams, N.K.' 1 'Rossjohn, J.' 2 # _citation.id primary _citation.title 'Crystal Structures of the Lyn Protein Tyrosine Kinase Domain in Its Apo- and Inhibitor-bound State' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 284 _citation.page_first 284 _citation.page_last 291 _citation.year 2009 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18984583 _citation.pdbx_database_id_DOI 10.1074/jbc.M807850200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Williams, N.K.' 1 ? primary 'Lucet, I.S.' 2 ? primary 'Klinken, S.P.' 3 ? primary 'Ingley, E.' 4 ? primary 'Rossjohn, J.' 5 ? # _cell.entry_id 2ZV7 _cell.length_a 127.310 _cell.length_b 127.310 _cell.length_c 53.836 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZV7 _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tyrosine-protein kinase Lyn' 31810.639 1 2.7.10.2 ? 'Kinase Domain, residues 239-512' ? 2 water nat water 18.015 14 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMDPAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE DNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELY DIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMDPAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE DNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELY DIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ASP n 1 5 PRO n 1 6 ALA n 1 7 TRP n 1 8 GLU n 1 9 ILE n 1 10 PRO n 1 11 ARG n 1 12 GLU n 1 13 SER n 1 14 ILE n 1 15 LYS n 1 16 LEU n 1 17 VAL n 1 18 LYS n 1 19 LYS n 1 20 LEU n 1 21 GLY n 1 22 ALA n 1 23 GLY n 1 24 GLN n 1 25 PHE n 1 26 GLY n 1 27 GLU n 1 28 VAL n 1 29 TRP n 1 30 MET n 1 31 GLY n 1 32 TYR n 1 33 TYR n 1 34 ASN n 1 35 ASN n 1 36 SER n 1 37 THR n 1 38 LYS n 1 39 VAL n 1 40 ALA n 1 41 VAL n 1 42 LYS n 1 43 THR n 1 44 LEU n 1 45 LYS n 1 46 PRO n 1 47 GLY n 1 48 THR n 1 49 MET n 1 50 SER n 1 51 VAL n 1 52 GLN n 1 53 ALA n 1 54 PHE n 1 55 LEU n 1 56 GLU n 1 57 GLU n 1 58 ALA n 1 59 ASN n 1 60 LEU n 1 61 MET n 1 62 LYS n 1 63 THR n 1 64 LEU n 1 65 GLN n 1 66 HIS n 1 67 ASP n 1 68 LYS n 1 69 LEU n 1 70 VAL n 1 71 ARG n 1 72 LEU n 1 73 TYR n 1 74 ALA n 1 75 VAL n 1 76 VAL n 1 77 THR n 1 78 LYS n 1 79 GLU n 1 80 GLU n 1 81 PRO n 1 82 ILE n 1 83 TYR n 1 84 ILE n 1 85 ILE n 1 86 THR n 1 87 GLU n 1 88 PHE n 1 89 MET n 1 90 ALA n 1 91 LYS n 1 92 GLY n 1 93 SER n 1 94 LEU n 1 95 LEU n 1 96 ASP n 1 97 PHE n 1 98 LEU n 1 99 LYS n 1 100 SER n 1 101 ASP n 1 102 GLU n 1 103 GLY n 1 104 GLY n 1 105 LYS n 1 106 VAL n 1 107 LEU n 1 108 LEU n 1 109 PRO n 1 110 LYS n 1 111 LEU n 1 112 ILE n 1 113 ASP n 1 114 PHE n 1 115 SER n 1 116 ALA n 1 117 GLN n 1 118 ILE n 1 119 ALA n 1 120 GLU n 1 121 GLY n 1 122 MET n 1 123 ALA n 1 124 TYR n 1 125 ILE n 1 126 GLU n 1 127 ARG n 1 128 LYS n 1 129 ASN n 1 130 TYR n 1 131 ILE n 1 132 HIS n 1 133 ARG n 1 134 ASP n 1 135 LEU n 1 136 ARG n 1 137 ALA n 1 138 ALA n 1 139 ASN n 1 140 VAL n 1 141 LEU n 1 142 VAL n 1 143 SER n 1 144 GLU n 1 145 SER n 1 146 LEU n 1 147 MET n 1 148 CYS n 1 149 LYS n 1 150 ILE n 1 151 ALA n 1 152 ASP n 1 153 PHE n 1 154 GLY n 1 155 LEU n 1 156 ALA n 1 157 ARG n 1 158 VAL n 1 159 ILE n 1 160 GLU n 1 161 ASP n 1 162 ASN n 1 163 GLU n 1 164 TYR n 1 165 THR n 1 166 ALA n 1 167 ARG n 1 168 GLU n 1 169 GLY n 1 170 ALA n 1 171 LYS n 1 172 PHE n 1 173 PRO n 1 174 ILE n 1 175 LYS n 1 176 TRP n 1 177 THR n 1 178 ALA n 1 179 PRO n 1 180 GLU n 1 181 ALA n 1 182 ILE n 1 183 ASN n 1 184 PHE n 1 185 GLY n 1 186 CYS n 1 187 PHE n 1 188 THR n 1 189 ILE n 1 190 LYS n 1 191 SER n 1 192 ASN n 1 193 VAL n 1 194 TRP n 1 195 SER n 1 196 PHE n 1 197 GLY n 1 198 ILE n 1 199 LEU n 1 200 LEU n 1 201 TYR n 1 202 GLU n 1 203 ILE n 1 204 VAL n 1 205 THR n 1 206 TYR n 1 207 GLY n 1 208 LYS n 1 209 ILE n 1 210 PRO n 1 211 TYR n 1 212 PRO n 1 213 GLY n 1 214 ARG n 1 215 THR n 1 216 ASN n 1 217 ALA n 1 218 ASP n 1 219 VAL n 1 220 MET n 1 221 SER n 1 222 ALA n 1 223 LEU n 1 224 SER n 1 225 GLN n 1 226 GLY n 1 227 TYR n 1 228 ARG n 1 229 MET n 1 230 PRO n 1 231 ARG n 1 232 MET n 1 233 GLU n 1 234 ASN n 1 235 CYS n 1 236 PRO n 1 237 ASP n 1 238 GLU n 1 239 LEU n 1 240 TYR n 1 241 ASP n 1 242 ILE n 1 243 MET n 1 244 LYS n 1 245 MET n 1 246 CYS n 1 247 TRP n 1 248 LYS n 1 249 GLU n 1 250 LYS n 1 251 ALA n 1 252 GLU n 1 253 GLU n 1 254 ARG n 1 255 PRO n 1 256 THR n 1 257 PHE n 1 258 ASP n 1 259 TYR n 1 260 LEU n 1 261 GLN n 1 262 SER n 1 263 VAL n 1 264 LEU n 1 265 ASP n 1 266 ASP n 1 267 PHE n 1 268 TYR n 1 269 THR n 1 270 ALA n 1 271 THR n 1 272 GLU n 1 273 GLY n 1 274 GLN n 1 275 TYR n 1 276 GLN n 1 277 GLN n 1 278 GLN n 1 279 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain SF9 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYN_MOUSE _struct_ref.pdbx_db_accession P25911 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII TEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT AREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKM CWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP ; _struct_ref.pdbx_align_begin 239 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2ZV7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 279 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P25911 _struct_ref_seq.db_align_beg 239 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 512 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 239 _struct_ref_seq.pdbx_auth_seq_align_end 512 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2ZV7 GLY A 1 ? UNP P25911 ? ? 'expression tag' 234 1 1 2ZV7 ALA A 2 ? UNP P25911 ? ? 'expression tag' 235 2 1 2ZV7 MET A 3 ? UNP P25911 ? ? 'expression tag' 236 3 1 2ZV7 ASP A 4 ? UNP P25911 ? ? 'expression tag' 237 4 1 2ZV7 PRO A 5 ? UNP P25911 ? ? 'expression tag' 238 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZV7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '23% polyethylene glycol 3350, 0.1M NaCl, 0.1M Na-Hepes pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54180 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54180 # _reflns.entry_id 2ZV7 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 63.3 _reflns.number_all ? _reflns.number_obs 11259 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 2ZV7 _refine.ls_number_reflns_obs 10743 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.52 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 99.98 _refine.ls_R_factor_obs 0.20638 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2048 _refine.ls_R_factor_R_free 0.2378 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 516 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.B_iso_mean 29.880 _refine.aniso_B[1][1] 0.26 _refine.aniso_B[2][2] 0.26 _refine.aniso_B[3][3] -0.38 _refine.aniso_B[1][2] 0.13 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1QPD' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.479 _refine.pdbx_overall_ESU_R_Free 0.265 _refine.overall_SU_ML 0.237 _refine.overall_SU_B 22.825 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2044 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 2058 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 38.52 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 2101 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.035 1.971 ? 2839 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.296 5.000 ? 257 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.410 24.023 ? 87 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.137 15.000 ? 376 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.197 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.070 0.200 ? 312 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1556 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.192 0.200 ? 956 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined .305 0.200 ? 1430 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.117 0.200 ? 49 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.141 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.201 0.200 ? 3 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.853 3.000 ? 1329 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.561 5.000 ? 2073 'X-RAY DIFFRACTION' ? r_scbond_it 2.395 7.000 ? 905 'X-RAY DIFFRACTION' ? r_scangle_it 3.460 10.000 ? 766 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.number_reflns_R_work 811 _refine_ls_shell.R_factor_R_work 0.296 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.411 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ZV7 _struct.title 'Lyn Tyrosine Kinase Domain, apo form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZV7 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;Lyn Kinase, Alternative splicing, ATP-binding, Kinase, Lipoprotein, Myristate, Nucleotide-binding, Palmitate, Phosphoprotein, Proto-oncogene, SH2 domain, SH3 domain, Transferase, Tyrosine-protein kinase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 10 ? GLU A 12 ? PRO A 243 GLU A 245 5 ? 3 HELX_P HELX_P2 2 SER A 50 ? LYS A 62 ? SER A 283 LYS A 295 1 ? 13 HELX_P HELX_P3 3 SER A 93 ? SER A 100 ? SER A 326 SER A 333 1 ? 8 HELX_P HELX_P4 4 GLU A 102 ? VAL A 106 ? GLU A 335 VAL A 339 5 ? 5 HELX_P HELX_P5 5 LEU A 107 ? LYS A 128 ? LEU A 340 LYS A 361 1 ? 22 HELX_P HELX_P6 6 ARG A 136 ? ALA A 138 ? ARG A 369 ALA A 371 5 ? 3 HELX_P HELX_P7 7 PRO A 173 ? THR A 177 ? PRO A 406 THR A 410 5 ? 5 HELX_P HELX_P8 8 ALA A 178 ? GLY A 185 ? ALA A 411 GLY A 418 1 ? 8 HELX_P HELX_P9 9 THR A 188 ? TYR A 206 ? THR A 421 TYR A 439 1 ? 19 HELX_P HELX_P10 10 THR A 215 ? LEU A 223 ? THR A 448 LEU A 456 1 ? 9 HELX_P HELX_P11 11 SER A 224 ? GLY A 226 ? SER A 457 GLY A 459 5 ? 3 HELX_P HELX_P12 12 PRO A 236 ? TRP A 247 ? PRO A 469 TRP A 480 1 ? 12 HELX_P HELX_P13 13 LYS A 250 ? ARG A 254 ? LYS A 483 ARG A 487 5 ? 5 HELX_P HELX_P14 14 THR A 256 ? ASP A 266 ? THR A 489 ASP A 499 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 14 ? GLY A 21 ? ILE A 247 GLY A 254 A 2 GLY A 26 ? TYR A 33 ? GLY A 259 TYR A 266 A 3 THR A 37 ? LEU A 44 ? THR A 270 LEU A 277 A 4 TYR A 83 ? GLU A 87 ? TYR A 316 GLU A 320 A 5 LEU A 72 ? VAL A 76 ? LEU A 305 VAL A 309 B 1 TYR A 130 ? ILE A 131 ? TYR A 363 ILE A 364 B 2 ARG A 157 ? VAL A 158 ? ARG A 390 VAL A 391 C 1 VAL A 140 ? VAL A 142 ? VAL A 373 VAL A 375 C 2 CYS A 148 ? ILE A 150 ? CYS A 381 ILE A 383 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 20 ? N LEU A 253 O VAL A 28 ? O VAL A 261 A 2 3 N TRP A 29 ? N TRP A 262 O VAL A 41 ? O VAL A 274 A 3 4 N ALA A 40 ? N ALA A 273 O THR A 86 ? O THR A 319 A 4 5 O ILE A 85 ? O ILE A 318 N TYR A 73 ? N TYR A 306 B 1 2 N ILE A 131 ? N ILE A 364 O ARG A 157 ? O ARG A 390 C 1 2 N LEU A 141 ? N LEU A 374 O LYS A 149 ? O LYS A 382 # _database_PDB_matrix.entry_id 2ZV7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZV7 _atom_sites.fract_transf_matrix[1][1] 0.007855 _atom_sites.fract_transf_matrix[1][2] 0.004535 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009070 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018575 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 234 ? ? ? A . n A 1 2 ALA 2 235 ? ? ? A . n A 1 3 MET 3 236 ? ? ? A . n A 1 4 ASP 4 237 ? ? ? A . n A 1 5 PRO 5 238 238 PRO PRO A . n A 1 6 ALA 6 239 239 ALA ALA A . n A 1 7 TRP 7 240 240 TRP TRP A . n A 1 8 GLU 8 241 241 GLU GLU A . n A 1 9 ILE 9 242 242 ILE ILE A . n A 1 10 PRO 10 243 243 PRO PRO A . n A 1 11 ARG 11 244 244 ARG ARG A . n A 1 12 GLU 12 245 245 GLU GLU A . n A 1 13 SER 13 246 246 SER SER A . n A 1 14 ILE 14 247 247 ILE ILE A . n A 1 15 LYS 15 248 248 LYS LYS A . n A 1 16 LEU 16 249 249 LEU LEU A . n A 1 17 VAL 17 250 250 VAL VAL A . n A 1 18 LYS 18 251 251 LYS LYS A . n A 1 19 LYS 19 252 252 LYS LYS A . n A 1 20 LEU 20 253 253 LEU LEU A . n A 1 21 GLY 21 254 254 GLY GLY A . n A 1 22 ALA 22 255 255 ALA ALA A . n A 1 23 GLY 23 256 256 GLY GLY A . n A 1 24 GLN 24 257 257 GLN GLN A . n A 1 25 PHE 25 258 258 PHE PHE A . n A 1 26 GLY 26 259 259 GLY GLY A . n A 1 27 GLU 27 260 260 GLU GLU A . n A 1 28 VAL 28 261 261 VAL VAL A . n A 1 29 TRP 29 262 262 TRP TRP A . n A 1 30 MET 30 263 263 MET MET A . n A 1 31 GLY 31 264 264 GLY GLY A . n A 1 32 TYR 32 265 265 TYR TYR A . n A 1 33 TYR 33 266 266 TYR TYR A . n A 1 34 ASN 34 267 267 ASN ASN A . n A 1 35 ASN 35 268 268 ASN ASN A . n A 1 36 SER 36 269 269 SER SER A . n A 1 37 THR 37 270 270 THR THR A . n A 1 38 LYS 38 271 271 LYS LYS A . n A 1 39 VAL 39 272 272 VAL VAL A . n A 1 40 ALA 40 273 273 ALA ALA A . n A 1 41 VAL 41 274 274 VAL VAL A . n A 1 42 LYS 42 275 275 LYS LYS A . n A 1 43 THR 43 276 276 THR THR A . n A 1 44 LEU 44 277 277 LEU LEU A . n A 1 45 LYS 45 278 278 LYS LYS A . n A 1 46 PRO 46 279 279 PRO PRO A . n A 1 47 GLY 47 280 280 GLY GLY A . n A 1 48 THR 48 281 281 THR THR A . n A 1 49 MET 49 282 282 MET MET A . n A 1 50 SER 50 283 283 SER SER A . n A 1 51 VAL 51 284 284 VAL VAL A . n A 1 52 GLN 52 285 285 GLN GLN A . n A 1 53 ALA 53 286 286 ALA ALA A . n A 1 54 PHE 54 287 287 PHE PHE A . n A 1 55 LEU 55 288 288 LEU LEU A . n A 1 56 GLU 56 289 289 GLU GLU A . n A 1 57 GLU 57 290 290 GLU GLU A . n A 1 58 ALA 58 291 291 ALA ALA A . n A 1 59 ASN 59 292 292 ASN ASN A . n A 1 60 LEU 60 293 293 LEU LEU A . n A 1 61 MET 61 294 294 MET MET A . n A 1 62 LYS 62 295 295 LYS LYS A . n A 1 63 THR 63 296 296 THR THR A . n A 1 64 LEU 64 297 297 LEU LEU A . n A 1 65 GLN 65 298 298 GLN GLN A . n A 1 66 HIS 66 299 299 HIS HIS A . n A 1 67 ASP 67 300 300 ASP ASP A . n A 1 68 LYS 68 301 301 LYS LYS A . n A 1 69 LEU 69 302 302 LEU LEU A . n A 1 70 VAL 70 303 303 VAL VAL A . n A 1 71 ARG 71 304 304 ARG ARG A . n A 1 72 LEU 72 305 305 LEU LEU A . n A 1 73 TYR 73 306 306 TYR TYR A . n A 1 74 ALA 74 307 307 ALA ALA A . n A 1 75 VAL 75 308 308 VAL VAL A . n A 1 76 VAL 76 309 309 VAL VAL A . n A 1 77 THR 77 310 310 THR THR A . n A 1 78 LYS 78 311 311 LYS LYS A . n A 1 79 GLU 79 312 312 GLU GLU A . n A 1 80 GLU 80 313 313 GLU GLU A . n A 1 81 PRO 81 314 314 PRO PRO A . n A 1 82 ILE 82 315 315 ILE ILE A . n A 1 83 TYR 83 316 316 TYR TYR A . n A 1 84 ILE 84 317 317 ILE ILE A . n A 1 85 ILE 85 318 318 ILE ILE A . n A 1 86 THR 86 319 319 THR THR A . n A 1 87 GLU 87 320 320 GLU GLU A . n A 1 88 PHE 88 321 321 PHE PHE A . n A 1 89 MET 89 322 322 MET MET A . n A 1 90 ALA 90 323 323 ALA ALA A . n A 1 91 LYS 91 324 324 LYS LYS A . n A 1 92 GLY 92 325 325 GLY GLY A . n A 1 93 SER 93 326 326 SER SER A . n A 1 94 LEU 94 327 327 LEU LEU A . n A 1 95 LEU 95 328 328 LEU LEU A . n A 1 96 ASP 96 329 329 ASP ASP A . n A 1 97 PHE 97 330 330 PHE PHE A . n A 1 98 LEU 98 331 331 LEU LEU A . n A 1 99 LYS 99 332 332 LYS LYS A . n A 1 100 SER 100 333 333 SER SER A . n A 1 101 ASP 101 334 334 ASP ASP A . n A 1 102 GLU 102 335 335 GLU GLU A . n A 1 103 GLY 103 336 336 GLY GLY A . n A 1 104 GLY 104 337 337 GLY GLY A . n A 1 105 LYS 105 338 338 LYS LYS A . n A 1 106 VAL 106 339 339 VAL VAL A . n A 1 107 LEU 107 340 340 LEU LEU A . n A 1 108 LEU 108 341 341 LEU LEU A . n A 1 109 PRO 109 342 342 PRO PRO A . n A 1 110 LYS 110 343 343 LYS LYS A . n A 1 111 LEU 111 344 344 LEU LEU A . n A 1 112 ILE 112 345 345 ILE ILE A . n A 1 113 ASP 113 346 346 ASP ASP A . n A 1 114 PHE 114 347 347 PHE PHE A . n A 1 115 SER 115 348 348 SER SER A . n A 1 116 ALA 116 349 349 ALA ALA A . n A 1 117 GLN 117 350 350 GLN GLN A . n A 1 118 ILE 118 351 351 ILE ILE A . n A 1 119 ALA 119 352 352 ALA ALA A . n A 1 120 GLU 120 353 353 GLU GLU A . n A 1 121 GLY 121 354 354 GLY GLY A . n A 1 122 MET 122 355 355 MET MET A . n A 1 123 ALA 123 356 356 ALA ALA A . n A 1 124 TYR 124 357 357 TYR TYR A . n A 1 125 ILE 125 358 358 ILE ILE A . n A 1 126 GLU 126 359 359 GLU GLU A . n A 1 127 ARG 127 360 360 ARG ARG A . n A 1 128 LYS 128 361 361 LYS LYS A . n A 1 129 ASN 129 362 362 ASN ASN A . n A 1 130 TYR 130 363 363 TYR TYR A . n A 1 131 ILE 131 364 364 ILE ILE A . n A 1 132 HIS 132 365 365 HIS HIS A . n A 1 133 ARG 133 366 366 ARG ARG A . n A 1 134 ASP 134 367 367 ASP ASP A . n A 1 135 LEU 135 368 368 LEU LEU A . n A 1 136 ARG 136 369 369 ARG ARG A . n A 1 137 ALA 137 370 370 ALA ALA A . n A 1 138 ALA 138 371 371 ALA ALA A . n A 1 139 ASN 139 372 372 ASN ASN A . n A 1 140 VAL 140 373 373 VAL VAL A . n A 1 141 LEU 141 374 374 LEU LEU A . n A 1 142 VAL 142 375 375 VAL VAL A . n A 1 143 SER 143 376 376 SER SER A . n A 1 144 GLU 144 377 377 GLU GLU A . n A 1 145 SER 145 378 378 SER SER A . n A 1 146 LEU 146 379 379 LEU LEU A . n A 1 147 MET 147 380 380 MET MET A . n A 1 148 CYS 148 381 381 CYS CYS A . n A 1 149 LYS 149 382 382 LYS LYS A . n A 1 150 ILE 150 383 383 ILE ILE A . n A 1 151 ALA 151 384 384 ALA ALA A . n A 1 152 ASP 152 385 385 ASP ASP A . n A 1 153 PHE 153 386 386 PHE PHE A . n A 1 154 GLY 154 387 387 GLY GLY A . n A 1 155 LEU 155 388 388 LEU LEU A . n A 1 156 ALA 156 389 389 ALA ALA A . n A 1 157 ARG 157 390 390 ARG ARG A . n A 1 158 VAL 158 391 391 VAL VAL A . n A 1 159 ILE 159 392 392 ILE ILE A . n A 1 160 GLU 160 393 ? ? ? A . n A 1 161 ASP 161 394 ? ? ? A . n A 1 162 ASN 162 395 ? ? ? A . n A 1 163 GLU 163 396 ? ? ? A . n A 1 164 TYR 164 397 ? ? ? A . n A 1 165 THR 165 398 ? ? ? A . n A 1 166 ALA 166 399 ? ? ? A . n A 1 167 ARG 167 400 400 ARG ARG A . n A 1 168 GLU 168 401 401 GLU GLU A . n A 1 169 GLY 169 402 402 GLY GLY A . n A 1 170 ALA 170 403 403 ALA ALA A . n A 1 171 LYS 171 404 404 LYS LYS A . n A 1 172 PHE 172 405 405 PHE PHE A . n A 1 173 PRO 173 406 406 PRO PRO A . n A 1 174 ILE 174 407 407 ILE ILE A . n A 1 175 LYS 175 408 408 LYS LYS A . n A 1 176 TRP 176 409 409 TRP TRP A . n A 1 177 THR 177 410 410 THR THR A . n A 1 178 ALA 178 411 411 ALA ALA A . n A 1 179 PRO 179 412 412 PRO PRO A . n A 1 180 GLU 180 413 413 GLU GLU A . n A 1 181 ALA 181 414 414 ALA ALA A . n A 1 182 ILE 182 415 415 ILE ILE A . n A 1 183 ASN 183 416 416 ASN ASN A . n A 1 184 PHE 184 417 417 PHE PHE A . n A 1 185 GLY 185 418 418 GLY GLY A . n A 1 186 CYS 186 419 419 CYS CYS A . n A 1 187 PHE 187 420 420 PHE PHE A . n A 1 188 THR 188 421 421 THR THR A . n A 1 189 ILE 189 422 422 ILE ILE A . n A 1 190 LYS 190 423 423 LYS LYS A . n A 1 191 SER 191 424 424 SER SER A . n A 1 192 ASN 192 425 425 ASN ASN A . n A 1 193 VAL 193 426 426 VAL VAL A . n A 1 194 TRP 194 427 427 TRP TRP A . n A 1 195 SER 195 428 428 SER SER A . n A 1 196 PHE 196 429 429 PHE PHE A . n A 1 197 GLY 197 430 430 GLY GLY A . n A 1 198 ILE 198 431 431 ILE ILE A . n A 1 199 LEU 199 432 432 LEU LEU A . n A 1 200 LEU 200 433 433 LEU LEU A . n A 1 201 TYR 201 434 434 TYR TYR A . n A 1 202 GLU 202 435 435 GLU GLU A . n A 1 203 ILE 203 436 436 ILE ILE A . n A 1 204 VAL 204 437 437 VAL VAL A . n A 1 205 THR 205 438 438 THR THR A . n A 1 206 TYR 206 439 439 TYR TYR A . n A 1 207 GLY 207 440 440 GLY GLY A . n A 1 208 LYS 208 441 441 LYS LYS A . n A 1 209 ILE 209 442 442 ILE ILE A . n A 1 210 PRO 210 443 443 PRO PRO A . n A 1 211 TYR 211 444 444 TYR TYR A . n A 1 212 PRO 212 445 445 PRO PRO A . n A 1 213 GLY 213 446 446 GLY GLY A . n A 1 214 ARG 214 447 447 ARG ARG A . n A 1 215 THR 215 448 448 THR THR A . n A 1 216 ASN 216 449 449 ASN ASN A . n A 1 217 ALA 217 450 450 ALA ALA A . n A 1 218 ASP 218 451 451 ASP ASP A . n A 1 219 VAL 219 452 452 VAL VAL A . n A 1 220 MET 220 453 453 MET MET A . n A 1 221 SER 221 454 454 SER SER A . n A 1 222 ALA 222 455 455 ALA ALA A . n A 1 223 LEU 223 456 456 LEU LEU A . n A 1 224 SER 224 457 457 SER SER A . n A 1 225 GLN 225 458 458 GLN GLN A . n A 1 226 GLY 226 459 459 GLY GLY A . n A 1 227 TYR 227 460 460 TYR TYR A . n A 1 228 ARG 228 461 461 ARG ARG A . n A 1 229 MET 229 462 462 MET MET A . n A 1 230 PRO 230 463 463 PRO PRO A . n A 1 231 ARG 231 464 464 ARG ARG A . n A 1 232 MET 232 465 465 MET MET A . n A 1 233 GLU 233 466 466 GLU GLU A . n A 1 234 ASN 234 467 467 ASN ASN A . n A 1 235 CYS 235 468 468 CYS CYS A . n A 1 236 PRO 236 469 469 PRO PRO A . n A 1 237 ASP 237 470 470 ASP ASP A . n A 1 238 GLU 238 471 471 GLU GLU A . n A 1 239 LEU 239 472 472 LEU LEU A . n A 1 240 TYR 240 473 473 TYR TYR A . n A 1 241 ASP 241 474 474 ASP ASP A . n A 1 242 ILE 242 475 475 ILE ILE A . n A 1 243 MET 243 476 476 MET MET A . n A 1 244 LYS 244 477 477 LYS LYS A . n A 1 245 MET 245 478 478 MET MET A . n A 1 246 CYS 246 479 479 CYS CYS A . n A 1 247 TRP 247 480 480 TRP TRP A . n A 1 248 LYS 248 481 481 LYS LYS A . n A 1 249 GLU 249 482 482 GLU GLU A . n A 1 250 LYS 250 483 483 LYS LYS A . n A 1 251 ALA 251 484 484 ALA ALA A . n A 1 252 GLU 252 485 485 GLU GLU A . n A 1 253 GLU 253 486 486 GLU GLU A . n A 1 254 ARG 254 487 487 ARG ARG A . n A 1 255 PRO 255 488 488 PRO PRO A . n A 1 256 THR 256 489 489 THR THR A . n A 1 257 PHE 257 490 490 PHE PHE A . n A 1 258 ASP 258 491 491 ASP ASP A . n A 1 259 TYR 259 492 492 TYR TYR A . n A 1 260 LEU 260 493 493 LEU LEU A . n A 1 261 GLN 261 494 494 GLN GLN A . n A 1 262 SER 262 495 495 SER SER A . n A 1 263 VAL 263 496 496 VAL VAL A . n A 1 264 LEU 264 497 497 LEU LEU A . n A 1 265 ASP 265 498 498 ASP ASP A . n A 1 266 ASP 266 499 499 ASP ASP A . n A 1 267 PHE 267 500 500 PHE PHE A . n A 1 268 TYR 268 501 501 TYR TYR A . n A 1 269 THR 269 502 ? ? ? A . n A 1 270 ALA 270 503 ? ? ? A . n A 1 271 THR 271 504 ? ? ? A . n A 1 272 GLU 272 505 ? ? ? A . n A 1 273 GLY 273 506 ? ? ? A . n A 1 274 GLN 274 507 ? ? ? A . n A 1 275 TYR 275 508 ? ? ? A . n A 1 276 GLN 276 509 ? ? ? A . n A 1 277 GLN 277 510 ? ? ? A . n A 1 278 GLN 278 511 ? ? ? A . n A 1 279 PRO 279 512 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 7 7 HOH HOH A . B 2 HOH 6 8 8 HOH HOH A . B 2 HOH 7 10 10 HOH HOH A . B 2 HOH 8 11 11 HOH HOH A . B 2 HOH 9 13 13 HOH HOH A . B 2 HOH 10 15 15 HOH HOH A . B 2 HOH 11 16 16 HOH HOH A . B 2 HOH 12 18 18 HOH HOH A . B 2 HOH 13 20 20 HOH HOH A . B 2 HOH 14 21 21 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-11-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _software.name REFMAC _software.classification refinement _software.version 5.2.0019 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 2ZV7 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE IS BASED ON REFERENCE 1 IN THE DATABASE, LYN_MOUSE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 255 ? ? -99.84 -155.09 2 1 ASN A 268 ? ? 65.30 -43.07 3 1 THR A 281 ? ? -56.16 -79.40 4 1 ALA A 307 ? ? 178.75 176.05 5 1 ARG A 366 ? ? 78.56 -7.60 6 1 ALA A 384 ? ? -124.38 -169.06 7 1 ASP A 385 ? ? 50.42 84.01 8 1 GLU A 401 ? ? 29.74 56.64 9 1 PHE A 500 ? ? -125.62 -72.16 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 401 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 402 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 134.35 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 257 ? CG ? A GLN 24 CG 2 1 Y 1 A GLN 257 ? CD ? A GLN 24 CD 3 1 Y 1 A GLN 257 ? OE1 ? A GLN 24 OE1 4 1 Y 1 A GLN 257 ? NE2 ? A GLN 24 NE2 5 1 Y 1 A ARG 400 ? CG ? A ARG 167 CG 6 1 Y 1 A ARG 400 ? CD ? A ARG 167 CD 7 1 Y 1 A ARG 400 ? NE ? A ARG 167 NE 8 1 Y 1 A ARG 400 ? CZ ? A ARG 167 CZ 9 1 Y 1 A ARG 400 ? NH1 ? A ARG 167 NH1 10 1 Y 1 A ARG 400 ? NH2 ? A ARG 167 NH2 11 1 Y 1 A GLU 401 ? CG ? A GLU 168 CG 12 1 Y 1 A GLU 401 ? CD ? A GLU 168 CD 13 1 Y 1 A GLU 401 ? OE1 ? A GLU 168 OE1 14 1 Y 1 A GLU 401 ? OE2 ? A GLU 168 OE2 15 1 Y 1 A LYS 477 ? CG ? A LYS 244 CG 16 1 Y 1 A LYS 477 ? CD ? A LYS 244 CD 17 1 Y 1 A LYS 477 ? CE ? A LYS 244 CE 18 1 Y 1 A LYS 477 ? NZ ? A LYS 244 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 234 ? A GLY 1 2 1 Y 1 A ALA 235 ? A ALA 2 3 1 Y 1 A MET 236 ? A MET 3 4 1 Y 1 A ASP 237 ? A ASP 4 5 1 Y 1 A GLU 393 ? A GLU 160 6 1 Y 1 A ASP 394 ? A ASP 161 7 1 Y 1 A ASN 395 ? A ASN 162 8 1 Y 1 A GLU 396 ? A GLU 163 9 1 Y 1 A TYR 397 ? A TYR 164 10 1 Y 1 A THR 398 ? A THR 165 11 1 Y 1 A ALA 399 ? A ALA 166 12 1 Y 1 A THR 502 ? A THR 269 13 1 Y 1 A ALA 503 ? A ALA 270 14 1 Y 1 A THR 504 ? A THR 271 15 1 Y 1 A GLU 505 ? A GLU 272 16 1 Y 1 A GLY 506 ? A GLY 273 17 1 Y 1 A GLN 507 ? A GLN 274 18 1 Y 1 A TYR 508 ? A TYR 275 19 1 Y 1 A GLN 509 ? A GLN 276 20 1 Y 1 A GLN 510 ? A GLN 277 21 1 Y 1 A GLN 511 ? A GLN 278 22 1 Y 1 A PRO 512 ? A PRO 279 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QPD _pdbx_initial_refinement_model.details 'PDB ENTRY 1QPD' #