data_2ZZM # _entry.id 2ZZM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZZM pdb_00002zzm 10.2210/pdb2zzm/pdb NDB PR0368 ? ? RCSB RCSB028625 ? ? WWPDB D_1000028625 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2ZZN _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZZM _pdbx_database_status.recvd_initial_deposition_date 2009-02-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Goto-Ito, S.' 1 'Ito, T.' 2 'Yokoyama, S.' 3 # _citation.id primary _citation.title 'Tertiary structure checkpoint at anticodon loop modification in tRNA functional maturation' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 16 _citation.page_first 1109 _citation.page_last 1115 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19749755 _citation.pdbx_database_id_DOI 10.1038/nsmb.1653 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goto-Ito, S.' 1 ? primary 'Ito, T.' 2 ? primary 'Kuratani, M.' 3 ? primary 'Bessho, Y.' 4 ? primary 'Yokoyama, S.' 5 ? # _cell.entry_id 2ZZM _cell.length_a 78.399 _cell.length_b 138.390 _cell.length_c 61.654 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZZM _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein MJ0883' 39124.023 1 ? ? ? ? 2 polymer syn 'RNA (84-MER)' 28328.891 1 ? ? ? ? 3 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 5 ? ? ? ? 5 water nat water 18.015 39 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;MPLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFELVDKELEEKKIIKKPSFREII S(MLZ)(MLZ)YRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKGVFRRKSEVKGEFRVRELEHL AGENRTLTIHKENGYRLWVDIAKVYFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELL (MLZ)KNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCD CEVLEKRIV(MLZ)SYAPREYILALDFKINKK ; ;MPLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFELVDKELEEKKIIKKPSFREII SKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLT IHKENGYRLWVDIAKVYFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNK LEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCDCEVLEKRIVKSY APREYILALDFKINKK ; A ? 2 polyribonucleotide no no ;GCAGGGGUCGCCAAGCCUGGCCAAAGGCGCUGGGCCUAGGACCCAGUCCCGUAGGGGUUCCAGGGUUCAAAUCCCUGCCC CUGCACCA ; ;GCAGGGGUCGCCAAGCCUGGCCAAAGGCGCUGGGCCUAGGACCCAGUCCCGUAGGGGUUCCAGGGUUCAAAUCCCUGCCC CUGCACCA ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 LEU n 1 4 CYS n 1 5 LEU n 1 6 LYS n 1 7 ILE n 1 8 ASN n 1 9 LYS n 1 10 LYS n 1 11 HIS n 1 12 GLY n 1 13 GLU n 1 14 GLN n 1 15 THR n 1 16 ARG n 1 17 ARG n 1 18 ILE n 1 19 LEU n 1 20 ILE n 1 21 GLU n 1 22 ASN n 1 23 ASN n 1 24 LEU n 1 25 LEU n 1 26 ASN n 1 27 LYS n 1 28 ASP n 1 29 TYR n 1 30 LYS n 1 31 ILE n 1 32 THR n 1 33 SER n 1 34 GLU n 1 35 GLY n 1 36 ASN n 1 37 TYR n 1 38 LEU n 1 39 TYR n 1 40 LEU n 1 41 PRO n 1 42 ILE n 1 43 LYS n 1 44 ASP n 1 45 VAL n 1 46 ASP n 1 47 GLU n 1 48 ASP n 1 49 ILE n 1 50 LEU n 1 51 LYS n 1 52 SER n 1 53 ILE n 1 54 LEU n 1 55 ASN n 1 56 ILE n 1 57 GLU n 1 58 PHE n 1 59 GLU n 1 60 LEU n 1 61 VAL n 1 62 ASP n 1 63 LYS n 1 64 GLU n 1 65 LEU n 1 66 GLU n 1 67 GLU n 1 68 LYS n 1 69 LYS n 1 70 ILE n 1 71 ILE n 1 72 LYS n 1 73 LYS n 1 74 PRO n 1 75 SER n 1 76 PHE n 1 77 ARG n 1 78 GLU n 1 79 ILE n 1 80 ILE n 1 81 SER n 1 82 MLZ n 1 83 MLZ n 1 84 TYR n 1 85 ARG n 1 86 LYS n 1 87 GLU n 1 88 ILE n 1 89 ASP n 1 90 GLU n 1 91 GLY n 1 92 LEU n 1 93 ILE n 1 94 SER n 1 95 LEU n 1 96 SER n 1 97 TYR n 1 98 ASP n 1 99 VAL n 1 100 VAL n 1 101 GLY n 1 102 ASP n 1 103 LEU n 1 104 VAL n 1 105 ILE n 1 106 LEU n 1 107 GLN n 1 108 ILE n 1 109 SER n 1 110 ASP n 1 111 GLU n 1 112 VAL n 1 113 ASP n 1 114 GLU n 1 115 LYS n 1 116 ILE n 1 117 ARG n 1 118 LYS n 1 119 GLU n 1 120 ILE n 1 121 GLY n 1 122 GLU n 1 123 LEU n 1 124 ALA n 1 125 TYR n 1 126 LYS n 1 127 LEU n 1 128 ILE n 1 129 PRO n 1 130 CYS n 1 131 LYS n 1 132 GLY n 1 133 VAL n 1 134 PHE n 1 135 ARG n 1 136 ARG n 1 137 LYS n 1 138 SER n 1 139 GLU n 1 140 VAL n 1 141 LYS n 1 142 GLY n 1 143 GLU n 1 144 PHE n 1 145 ARG n 1 146 VAL n 1 147 ARG n 1 148 GLU n 1 149 LEU n 1 150 GLU n 1 151 HIS n 1 152 LEU n 1 153 ALA n 1 154 GLY n 1 155 GLU n 1 156 ASN n 1 157 ARG n 1 158 THR n 1 159 LEU n 1 160 THR n 1 161 ILE n 1 162 HIS n 1 163 LYS n 1 164 GLU n 1 165 ASN n 1 166 GLY n 1 167 TYR n 1 168 ARG n 1 169 LEU n 1 170 TRP n 1 171 VAL n 1 172 ASP n 1 173 ILE n 1 174 ALA n 1 175 LYS n 1 176 VAL n 1 177 TYR n 1 178 PHE n 1 179 SER n 1 180 PRO n 1 181 ARG n 1 182 LEU n 1 183 GLY n 1 184 GLY n 1 185 GLU n 1 186 ARG n 1 187 ALA n 1 188 ARG n 1 189 ILE n 1 190 MET n 1 191 LYS n 1 192 LYS n 1 193 VAL n 1 194 SER n 1 195 LEU n 1 196 ASN n 1 197 ASP n 1 198 VAL n 1 199 VAL n 1 200 VAL n 1 201 ASP n 1 202 MET n 1 203 PHE n 1 204 ALA n 1 205 GLY n 1 206 VAL n 1 207 GLY n 1 208 PRO n 1 209 PHE n 1 210 SER n 1 211 ILE n 1 212 ALA n 1 213 CYS n 1 214 LYS n 1 215 ASN n 1 216 ALA n 1 217 LYS n 1 218 LYS n 1 219 ILE n 1 220 TYR n 1 221 ALA n 1 222 ILE n 1 223 ASP n 1 224 ILE n 1 225 ASN n 1 226 PRO n 1 227 HIS n 1 228 ALA n 1 229 ILE n 1 230 GLU n 1 231 LEU n 1 232 LEU n 1 233 MLZ n 1 234 LYS n 1 235 ASN n 1 236 ILE n 1 237 LYS n 1 238 LEU n 1 239 ASN n 1 240 LYS n 1 241 LEU n 1 242 GLU n 1 243 HIS n 1 244 LYS n 1 245 ILE n 1 246 ILE n 1 247 PRO n 1 248 ILE n 1 249 LEU n 1 250 SER n 1 251 ASP n 1 252 VAL n 1 253 ARG n 1 254 GLU n 1 255 VAL n 1 256 ASP n 1 257 VAL n 1 258 LYS n 1 259 GLY n 1 260 ASN n 1 261 ARG n 1 262 VAL n 1 263 ILE n 1 264 MET n 1 265 ASN n 1 266 LEU n 1 267 PRO n 1 268 LYS n 1 269 PHE n 1 270 ALA n 1 271 HIS n 1 272 LYS n 1 273 PHE n 1 274 ILE n 1 275 ASP n 1 276 LYS n 1 277 ALA n 1 278 LEU n 1 279 ASP n 1 280 ILE n 1 281 VAL n 1 282 GLU n 1 283 GLU n 1 284 GLY n 1 285 GLY n 1 286 VAL n 1 287 ILE n 1 288 HIS n 1 289 TYR n 1 290 TYR n 1 291 THR n 1 292 ILE n 1 293 GLY n 1 294 LYS n 1 295 ASP n 1 296 PHE n 1 297 ASP n 1 298 LYS n 1 299 ALA n 1 300 ILE n 1 301 LYS n 1 302 LEU n 1 303 PHE n 1 304 GLU n 1 305 LYS n 1 306 LYS n 1 307 CYS n 1 308 ASP n 1 309 CYS n 1 310 GLU n 1 311 VAL n 1 312 LEU n 1 313 GLU n 1 314 LYS n 1 315 ARG n 1 316 ILE n 1 317 VAL n 1 318 MLZ n 1 319 SER n 1 320 TYR n 1 321 ALA n 1 322 PRO n 1 323 ARG n 1 324 GLU n 1 325 TYR n 1 326 ILE n 1 327 LEU n 1 328 ALA n 1 329 LEU n 1 330 ASP n 1 331 PHE n 1 332 LYS n 1 333 ILE n 1 334 ASN n 1 335 LYS n 1 336 LYS n 2 1 G n 2 2 C n 2 3 A n 2 4 G n 2 5 G n 2 6 G n 2 7 G n 2 8 U n 2 9 C n 2 10 G n 2 11 C n 2 12 C n 2 13 A n 2 14 A n 2 15 G n 2 16 C n 2 17 C n 2 18 U n 2 19 G n 2 20 G n 2 21 C n 2 22 C n 2 23 A n 2 24 A n 2 25 A n 2 26 G n 2 27 G n 2 28 C n 2 29 G n 2 30 C n 2 31 U n 2 32 G n 2 33 G n 2 34 G n 2 35 C n 2 36 C n 2 37 U n 2 38 A n 2 39 G n 2 40 G n 2 41 A n 2 42 C n 2 43 C n 2 44 C n 2 45 A n 2 46 G n 2 47 U n 2 48 C n 2 49 C n 2 50 C n 2 51 G n 2 52 U n 2 53 A n 2 54 G n 2 55 G n 2 56 G n 2 57 G n 2 58 U n 2 59 U n 2 60 C n 2 61 C n 2 62 A n 2 63 G n 2 64 G n 2 65 G n 2 66 U n 2 67 U n 2 68 C n 2 69 A n 2 70 A n 2 71 A n 2 72 U n 2 73 C n 2 74 C n 2 75 C n 2 76 U n 2 77 G n 2 78 C n 2 79 C n 2 80 C n 2 81 C n 2 82 U n 2 83 G n 2 84 C n 2 85 A n 2 86 C n 2 87 C n 2 88 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Methanococcus jannaschii' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanocaldococcus jannaschii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2190 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET26b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'synthesized in vitro with the recombinant RNA polymerase of T7 phage' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Y883_METJA Q58293 1 ;MPLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFELVDKELEEKKIIKKPSFREII SKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLT IHKENGYRLWVDIAKVYFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNK LEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCDCEVLEKRIVKSY APREYILALDFKINKK ; 1 ? 2 GB L77117 6626255 2 ;GCAGGGGUCGCCAAGCCUGGCCAAAGGCGCUGGGCCUAGGACCCAGUCCCGUAGGGGUUCCAGGGUUCAAAUCCCUGCCC CUGCACCA ; 637982 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZZM A 1 ? 336 ? Q58293 1 ? 336 ? 1 336 2 2 2ZZM B 1 ? 88 ? 6626255 637982 ? 638069 ? 1 76 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MLZ 'L-peptide linking' n N-METHYL-LYSINE ? 'C7 H16 N2 O2' 160.214 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZZM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 50.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'sitting drop, vapor diffusion' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '175mM Mg(HCOO)2, 13% PEG 3350, 25mM KCl, 35mM Na-HEPES, pH 7.2, sitting drop, vapor diffusion, temperature 293K' # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Mg(HCOO)2' ? ? ? 1 2 1 'PEG 3350' ? ? ? 1 3 1 KCl ? ? ? 1 4 1 Na-HEPES ? ? ? 1 5 1 H2O ? ? ? 1 6 2 'Mg(HCOO)2' ? ? ? 1 7 2 'PEG 3350' ? ? ? 1 8 2 KCl ? ? ? 1 9 2 Na-HEPES ? ? ? 1 10 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-02-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 2ZZM _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.65 _reflns.number_obs 20282 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 70.8 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2ZZM _refine.ls_number_reflns_obs 20064 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1219642.89 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.03 _refine.ls_d_res_high 2.65 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.215 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.289 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1022 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 70.8 _refine.aniso_B[1][1] 16.99 _refine.aniso_B[2][2] -14.78 _refine.aniso_B[3][3] -2.21 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 73.3428 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 2yx1 and 1wz2' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2ZZM _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_sigma_a_obs 0.48 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.44 _refine_analyze.Luzzati_sigma_a_free 0.68 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2724 _refine_hist.pdbx_number_atoms_nucleic_acid 1793 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 4588 _refine_hist.d_res_high 2.65 _refine_hist.d_res_low 46.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.41 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 5.87 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 8.06 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 8.48 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 10.95 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.65 _refine_ls_shell.d_res_low 2.82 _refine_ls_shell.number_reflns_R_work 3076 _refine_ls_shell.R_factor_R_work 0.402 _refine_ls_shell.percent_reflns_obs 98.4 _refine_ls_shell.R_factor_R_free 0.510 _refine_ls_shell.R_factor_R_free_error 0.039 _refine_ls_shell.percent_reflns_R_free 5.3 _refine_ls_shell.number_reflns_R_free 172 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_mlz.param protein_mlz.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 adomet.param water.top 'X-RAY DIFFRACTION' 4 ion.param adomet.top 'X-RAY DIFFRACTION' 5 water_rep.param ion.top # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2ZZM _struct.title 'The complex structure of aTrm5 and tRNALeu' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZZM _struct_keywords.pdbx_keywords TRANSFERASE/RNA _struct_keywords.text 'protein-rna complex, TRANSFERASE-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 11 ? ASN A 22 ? HIS A 11 ASN A 22 1 ? 12 HELX_P HELX_P2 2 ASP A 46 ? LEU A 54 ? ASP A 46 LEU A 54 1 ? 9 HELX_P HELX_P3 3 SER A 75 ? TYR A 84 ? SER A 75 TYR A 84 1 ? 10 HELX_P HELX_P4 4 TYR A 84 ? GLU A 90 ? TYR A 84 GLU A 90 1 ? 7 HELX_P HELX_P5 5 ASP A 113 ? ILE A 128 ? ASP A 113 ILE A 128 1 ? 16 HELX_P HELX_P6 6 SER A 179 ? ARG A 181 ? SER A 179 ARG A 181 5 ? 3 HELX_P HELX_P7 7 LEU A 182 ? LYS A 191 ? LEU A 182 LYS A 191 1 ? 10 HELX_P HELX_P8 8 GLY A 207 ? ALA A 212 ? GLY A 207 ALA A 212 1 ? 6 HELX_P HELX_P9 9 ASN A 225 ? ASN A 239 ? ASN A 225 ASN A 239 1 ? 15 HELX_P HELX_P10 10 ASP A 251 ? VAL A 255 ? ASP A 251 VAL A 255 5 ? 5 HELX_P HELX_P11 11 ALA A 270 ? LYS A 272 ? ALA A 270 LYS A 272 5 ? 3 HELX_P HELX_P12 12 PHE A 273 ? ILE A 280 ? PHE A 273 ILE A 280 1 ? 8 HELX_P HELX_P13 13 PHE A 296 ? LYS A 305 ? PHE A 296 LYS A 305 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 81 C ? ? ? 1_555 A MLZ 82 N ? ? A SER 81 A MLZ 82 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? A MLZ 82 C ? ? ? 1_555 A MLZ 83 N ? ? A MLZ 82 A MLZ 83 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A MLZ 83 C ? ? ? 1_555 A TYR 84 N ? ? A MLZ 83 A TYR 84 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A LEU 232 C ? ? ? 1_555 A MLZ 233 N ? ? A LEU 232 A MLZ 233 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A MLZ 233 C ? ? ? 1_555 A LYS 234 N ? ? A MLZ 233 A LYS 234 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A VAL 317 C ? ? ? 1_555 A MLZ 318 N ? ? A VAL 317 A MLZ 318 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale7 covale both ? A MLZ 318 C ? ? ? 1_555 A SER 319 N ? ? A MLZ 318 A SER 319 1_555 ? ? ? ? ? ? ? 1.331 ? ? metalc1 metalc ? ? B A 71 OP1 ? ? ? 1_555 D MG . MG ? ? B A 59 B MG 101 1_555 ? ? ? ? ? ? ? 2.240 ? ? metalc2 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 610 1_555 ? ? ? ? ? ? ? 2.454 ? ? metalc3 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 103 B HOH 612 1_555 ? ? ? ? ? ? ? 2.489 ? ? hydrog1 hydrog ? ? B C 2 O2 ? ? ? 1_555 B C 84 N4 ? ? B C 2 B C 72 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog2 hydrog ? ? B G 4 N2 ? ? ? 1_555 B U 82 O4 ? ? B G 4 B U 70 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog3 hydrog ? ? B G 5 N1 ? ? ? 1_555 B C 80 O2 ? ? B G 5 B C 68 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog4 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 79 N3 ? ? B G 6 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 79 O2 ? ? B G 6 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 79 N4 ? ? B G 6 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 78 N3 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 78 O2 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 78 N4 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B U 8 N3 ? ? ? 1_555 B A 14 N7 ? ? B U 8 B A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog11 hydrog ? ? B U 8 O2 ? ? ? 1_555 B A 14 N6 ? ? B U 8 B A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog12 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 28 N3 ? ? B G 10 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 28 O2 ? ? B G 10 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 28 N4 ? ? B G 10 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B C 11 N3 ? ? ? 1_555 B G 27 N1 ? ? B C 11 B G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B C 11 N4 ? ? ? 1_555 B G 27 O6 ? ? B C 11 B G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 11 O2 ? ? ? 1_555 B G 27 N2 ? ? B C 11 B G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 12 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 12 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 12 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B A 13 N3 ? ? ? 1_555 B A 25 N6 ? ? B A 13 B A 22 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog22 hydrog ? ? B A 14 N6 ? ? ? 1_555 B A 24 N3 ? ? B A 14 B A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog23 hydrog ? ? B G 15 N2 ? ? ? 1_555 B C 22 N3 ? A B G 15 B C 20 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog24 hydrog ? ? B G 15 N1 ? ? ? 1_555 B C 60 O2 ? ? B G 15 B C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog25 hydrog ? ? B G 15 N2 ? ? ? 1_555 B C 60 N3 ? ? B G 15 B C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog26 hydrog ? ? B G 19 N1 ? ? ? 1_555 B U 67 O2 ? ? B G 18 B U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog27 hydrog ? ? B G 20 N1 ? ? ? 1_555 B C 68 N3 ? ? B G 19 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 68 O2 ? ? B G 19 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 20 O6 ? ? ? 1_555 B C 68 N4 ? ? B G 19 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B A 23 N6 ? B ? 1_555 B U 58 O2 ? H B A 20 B U 47 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog31 hydrog ? ? B A 23 N7 ? B ? 1_555 B U 58 N3 ? H B A 20 B U 47 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog32 hydrog ? ? B C 22 O2 ? A ? 1_555 B C 60 N4 ? ? B C 20 B C 48 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog33 hydrog ? ? B A 24 N6 ? ? ? 1_555 B U 59 O2 ? I B A 21 B U 47 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog34 hydrog ? ? B A 24 N7 ? ? ? 1_555 B U 59 N3 ? I B A 21 B U 47 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog35 hydrog ? ? B G 29 N1 ? ? ? 1_555 B U 47 O2 ? ? B G 26 B U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog36 hydrog ? ? B G 29 O6 ? ? ? 1_555 B U 47 N3 ? ? B G 26 B U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog37 hydrog ? ? B C 30 N3 ? ? ? 1_555 B G 46 N1 ? ? B C 27 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B C 30 N4 ? ? ? 1_555 B G 46 O6 ? ? B C 27 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B C 30 O2 ? ? ? 1_555 B G 46 N2 ? ? B C 27 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B U 31 N3 ? ? ? 1_555 B A 45 N1 ? ? B U 28 B A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B U 31 O4 ? ? ? 1_555 B A 45 N6 ? ? B U 28 B A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B G 32 N1 ? ? ? 1_555 B C 44 N3 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 32 N2 ? ? ? 1_555 B C 44 O2 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B G 32 O6 ? ? ? 1_555 B C 44 N4 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B G 33 N1 ? ? ? 1_555 B C 43 N3 ? ? B G 30 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B G 33 N2 ? ? ? 1_555 B C 43 O2 ? ? B G 30 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B G 33 O6 ? ? ? 1_555 B C 43 N4 ? ? B G 30 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B G 34 N1 ? ? ? 1_555 B C 42 N3 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B G 34 N2 ? ? ? 1_555 B C 42 O2 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B G 34 O6 ? ? ? 1_555 B C 42 N4 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B C 35 O2 ? ? ? 1_555 B A 41 N6 ? ? B C 32 B A 38 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog52 hydrog ? ? B C 48 N3 ? ? ? 1_555 B G 57 N1 ? G B C 45 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 48 N4 ? ? ? 1_555 B G 57 O6 ? G B C 45 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 48 O2 ? ? ? 1_555 B G 57 N2 ? G B C 45 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B C 49 N3 ? ? ? 1_555 B G 56 N1 ? F B C 46 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B C 49 N4 ? ? ? 1_555 B G 56 O6 ? F B C 46 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B C 49 O2 ? ? ? 1_555 B G 56 N2 ? F B C 46 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B C 50 N3 ? ? ? 1_555 B G 55 N1 ? E B C 47 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B C 50 N4 ? ? ? 1_555 B G 55 O6 ? E B C 47 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B C 50 O2 ? ? ? 1_555 B G 55 N2 ? E B C 47 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 51 N2 ? A ? 1_555 B G 54 N7 ? D B G 47 B G 47 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog62 hydrog ? ? B C 61 N3 ? ? ? 1_555 B G 77 N1 ? ? B C 49 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B C 61 N4 ? ? ? 1_555 B G 77 O6 ? ? B C 49 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B C 61 O2 ? ? ? 1_555 B G 77 N2 ? ? B C 49 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B G 63 O6 ? ? ? 1_555 B C 75 N4 ? ? B G 51 B C 63 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog66 hydrog ? ? B G 64 N1 ? ? ? 1_555 B C 74 N3 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B G 64 N2 ? ? ? 1_555 B C 74 O2 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 64 O6 ? ? ? 1_555 B C 74 N4 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B G 65 N1 ? ? ? 1_555 B C 73 N3 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 65 N2 ? ? ? 1_555 B C 73 O2 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 65 O6 ? ? ? 1_555 B C 73 N4 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B U 66 N3 ? ? ? 1_555 B A 70 N7 ? ? B U 54 B A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog73 hydrog ? ? B U 66 O2 ? ? ? 1_555 B A 70 N6 ? ? B U 54 B A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 2 ? D ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? parallel D 2 3 ? parallel D 3 4 ? parallel D 4 5 ? parallel D 5 6 ? anti-parallel D 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 4 ? ASN A 8 ? CYS A 4 ASN A 8 A 2 TYR A 37 ? PRO A 41 ? TYR A 37 PRO A 41 B 1 ASP A 98 ? VAL A 100 ? ASP A 98 VAL A 100 B 2 LEU A 103 ? LEU A 106 ? LEU A 103 LEU A 106 B 3 GLY A 132 ? ARG A 136 ? GLY A 132 ARG A 136 B 4 LEU A 149 ? GLY A 154 ? LEU A 149 GLY A 154 C 1 LEU A 159 ? GLU A 164 ? LEU A 159 GLU A 164 C 2 TYR A 167 ? ASP A 172 ? TYR A 167 ASP A 172 D 1 ILE A 245 ? LEU A 249 ? ILE A 245 LEU A 249 D 2 LYS A 218 ? ASP A 223 ? LYS A 218 ASP A 223 D 3 VAL A 198 ? ASP A 201 ? VAL A 198 ASP A 201 D 4 GLY A 259 ? MET A 264 ? GLY A 259 MET A 264 D 5 VAL A 281 ? GLY A 293 ? VAL A 281 GLY A 293 D 6 TYR A 325 ? ILE A 333 ? TYR A 325 ILE A 333 D 7 CYS A 309 ? SER A 319 ? CYS A 309 SER A 319 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 7 ? N ILE A 7 O LEU A 38 ? O LEU A 38 B 1 2 N VAL A 100 ? N VAL A 100 O LEU A 103 ? O LEU A 103 B 2 3 N LEU A 106 ? N LEU A 106 O PHE A 134 ? O PHE A 134 B 3 4 N VAL A 133 ? N VAL A 133 O LEU A 152 ? O LEU A 152 C 1 2 N HIS A 162 ? N HIS A 162 O LEU A 169 ? O LEU A 169 D 1 2 O ILE A 246 ? O ILE A 246 N ILE A 219 ? N ILE A 219 D 2 3 O TYR A 220 ? O TYR A 220 N VAL A 199 ? N VAL A 199 D 3 4 N VAL A 200 ? N VAL A 200 O ILE A 263 ? O ILE A 263 D 4 5 N ASN A 260 ? N ASN A 260 O VAL A 286 ? O VAL A 286 D 5 6 N THR A 291 ? N THR A 291 O LEU A 327 ? O LEU A 327 D 6 7 O ILE A 326 ? O ILE A 326 N VAL A 317 ? N VAL A 317 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SAM 401 ? 21 'BINDING SITE FOR RESIDUE SAM A 401' AC2 Software B MG 101 ? 3 'BINDING SITE FOR RESIDUE MG B 101' AC3 Software B MG 102 ? 2 'BINDING SITE FOR RESIDUE MG B 102' AC4 Software B MG 103 ? 1 'BINDING SITE FOR RESIDUE MG B 103' AC5 Software B MG 105 ? 1 'BINDING SITE FOR RESIDUE MG B 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 GLU A 143 ? GLU A 143 . ? 1_555 ? 2 AC1 21 PHE A 144 ? PHE A 144 . ? 1_555 ? 3 AC1 21 TYR A 177 ? TYR A 177 . ? 1_555 ? 4 AC1 21 PHE A 178 ? PHE A 178 . ? 1_555 ? 5 AC1 21 SER A 179 ? SER A 179 . ? 1_555 ? 6 AC1 21 LEU A 182 ? LEU A 182 . ? 1_555 ? 7 AC1 21 ARG A 186 ? ARG A 186 . ? 1_555 ? 8 AC1 21 PHE A 203 ? PHE A 203 . ? 1_555 ? 9 AC1 21 PRO A 208 ? PRO A 208 . ? 1_555 ? 10 AC1 21 PHE A 209 ? PHE A 209 . ? 1_555 ? 11 AC1 21 ASP A 223 ? ASP A 223 . ? 1_555 ? 12 AC1 21 ILE A 224 ? ILE A 224 . ? 1_555 ? 13 AC1 21 ASN A 225 ? ASN A 225 . ? 1_555 ? 14 AC1 21 SER A 250 ? SER A 250 . ? 1_555 ? 15 AC1 21 ASP A 251 ? ASP A 251 . ? 1_555 ? 16 AC1 21 VAL A 252 ? VAL A 252 . ? 1_555 ? 17 AC1 21 ASN A 265 ? ASN A 265 . ? 1_555 ? 18 AC1 21 LEU A 266 ? LEU A 266 . ? 1_555 ? 19 AC1 21 HOH I . ? HOH A 506 . ? 1_555 ? 20 AC1 21 HOH I . ? HOH A 518 . ? 1_555 ? 21 AC1 21 G B 40 ? G B 37 . ? 1_555 ? 22 AC2 3 C B 22 A C B 20 . ? 1_555 ? 23 AC2 3 A B 71 ? A B 59 . ? 1_555 ? 24 AC2 3 HOH J . ? HOH B 610 . ? 1_555 ? 25 AC3 2 G B 51 A G B 47 . ? 1_555 ? 26 AC3 2 A B 53 C A B 47 . ? 1_555 ? 27 AC4 1 HOH J . ? HOH B 612 . ? 1_555 ? 28 AC5 1 U B 37 ? U B 34 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZZM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZZM _atom_sites.fract_transf_matrix[1][1] 0.012755 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007226 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016220 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 MLZ 82 82 82 MLZ MLZ A . n A 1 83 MLZ 83 83 83 MLZ MLZ A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 TYR 125 125 125 TYR TYR A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 PRO 129 129 129 PRO PRO A . n A 1 130 CYS 130 130 130 CYS CYS A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 HIS 151 151 151 HIS HIS A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 HIS 162 162 162 HIS HIS A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 TRP 170 170 170 TRP TRP A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 MET 190 190 190 MET MET A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 ASN 196 196 196 ASN ASN A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 ASP 201 201 201 ASP ASP A . n A 1 202 MET 202 202 202 MET MET A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 CYS 213 213 213 CYS CYS A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 ASN 215 215 215 ASN ASN A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 TYR 220 220 220 TYR TYR A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 ASP 223 223 223 ASP ASP A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 PRO 226 226 226 PRO PRO A . n A 1 227 HIS 227 227 227 HIS HIS A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 GLU 230 230 230 GLU GLU A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 LEU 232 232 232 LEU LEU A . n A 1 233 MLZ 233 233 233 MLZ MLZ A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 ASN 235 235 235 ASN ASN A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 ASN 239 239 239 ASN ASN A . n A 1 240 LYS 240 240 240 LYS LYS A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 HIS 243 243 243 HIS HIS A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 ILE 246 246 246 ILE ILE A . n A 1 247 PRO 247 247 247 PRO PRO A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 SER 250 250 250 SER SER A . n A 1 251 ASP 251 251 251 ASP ASP A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 GLU 254 254 254 GLU GLU A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 VAL 257 257 257 VAL VAL A . n A 1 258 LYS 258 258 258 LYS LYS A . n A 1 259 GLY 259 259 259 GLY GLY A . n A 1 260 ASN 260 260 260 ASN ASN A . n A 1 261 ARG 261 261 261 ARG ARG A . n A 1 262 VAL 262 262 262 VAL VAL A . n A 1 263 ILE 263 263 263 ILE ILE A . n A 1 264 MET 264 264 264 MET MET A . n A 1 265 ASN 265 265 265 ASN ASN A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 PRO 267 267 267 PRO PRO A . n A 1 268 LYS 268 268 268 LYS LYS A . n A 1 269 PHE 269 269 269 PHE PHE A . n A 1 270 ALA 270 270 270 ALA ALA A . n A 1 271 HIS 271 271 271 HIS HIS A . n A 1 272 LYS 272 272 272 LYS LYS A . n A 1 273 PHE 273 273 273 PHE PHE A . n A 1 274 ILE 274 274 274 ILE ILE A . n A 1 275 ASP 275 275 275 ASP ASP A . n A 1 276 LYS 276 276 276 LYS LYS A . n A 1 277 ALA 277 277 277 ALA ALA A . n A 1 278 LEU 278 278 278 LEU LEU A . n A 1 279 ASP 279 279 279 ASP ASP A . n A 1 280 ILE 280 280 280 ILE ILE A . n A 1 281 VAL 281 281 281 VAL VAL A . n A 1 282 GLU 282 282 282 GLU GLU A . n A 1 283 GLU 283 283 283 GLU GLU A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 GLY 285 285 285 GLY GLY A . n A 1 286 VAL 286 286 286 VAL VAL A . n A 1 287 ILE 287 287 287 ILE ILE A . n A 1 288 HIS 288 288 288 HIS HIS A . n A 1 289 TYR 289 289 289 TYR TYR A . n A 1 290 TYR 290 290 290 TYR TYR A . n A 1 291 THR 291 291 291 THR THR A . n A 1 292 ILE 292 292 292 ILE ILE A . n A 1 293 GLY 293 293 293 GLY GLY A . n A 1 294 LYS 294 294 294 LYS LYS A . n A 1 295 ASP 295 295 295 ASP ASP A . n A 1 296 PHE 296 296 296 PHE PHE A . n A 1 297 ASP 297 297 297 ASP ASP A . n A 1 298 LYS 298 298 298 LYS LYS A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 ILE 300 300 300 ILE ILE A . n A 1 301 LYS 301 301 301 LYS LYS A . n A 1 302 LEU 302 302 302 LEU LEU A . n A 1 303 PHE 303 303 303 PHE PHE A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 LYS 305 305 305 LYS LYS A . n A 1 306 LYS 306 306 306 LYS LYS A . n A 1 307 CYS 307 307 307 CYS CYS A . n A 1 308 ASP 308 308 308 ASP ASP A . n A 1 309 CYS 309 309 309 CYS CYS A . n A 1 310 GLU 310 310 310 GLU GLU A . n A 1 311 VAL 311 311 311 VAL VAL A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 GLU 313 313 313 GLU GLU A . n A 1 314 LYS 314 314 314 LYS LYS A . n A 1 315 ARG 315 315 315 ARG ARG A . n A 1 316 ILE 316 316 316 ILE ILE A . n A 1 317 VAL 317 317 317 VAL VAL A . n A 1 318 MLZ 318 318 318 MLZ MLZ A . n A 1 319 SER 319 319 319 SER SER A . n A 1 320 TYR 320 320 320 TYR TYR A . n A 1 321 ALA 321 321 321 ALA ALA A . n A 1 322 PRO 322 322 322 PRO PRO A . n A 1 323 ARG 323 323 323 ARG ARG A . n A 1 324 GLU 324 324 324 GLU GLU A . n A 1 325 TYR 325 325 325 TYR TYR A . n A 1 326 ILE 326 326 326 ILE ILE A . n A 1 327 LEU 327 327 327 LEU LEU A . n A 1 328 ALA 328 328 328 ALA ALA A . n A 1 329 LEU 329 329 329 LEU LEU A . n A 1 330 ASP 330 330 330 ASP ASP A . n A 1 331 PHE 331 331 331 PHE PHE A . n A 1 332 LYS 332 332 332 LYS LYS A . n A 1 333 ILE 333 333 333 ILE ILE A . n A 1 334 ASN 334 334 334 ASN ASN A . n A 1 335 LYS 335 335 ? ? ? A . n A 1 336 LYS 336 336 ? ? ? A . n B 2 1 G 1 1 1 G G B . n B 2 2 C 2 2 2 C C B . n B 2 3 A 3 3 3 A A B . n B 2 4 G 4 4 4 G G B . n B 2 5 G 5 5 5 G G B . n B 2 6 G 6 6 6 G G B . n B 2 7 G 7 7 7 G G B . n B 2 8 U 8 8 8 U U B . n B 2 9 C 9 9 9 C C B . n B 2 10 G 10 10 10 G G B . n B 2 11 C 11 11 11 C C B . n B 2 12 C 12 12 12 C C B . n B 2 13 A 13 13 13 A A B . n B 2 14 A 14 14 14 A A B . n B 2 15 G 15 15 15 G G B . n B 2 16 C 16 16 16 C C B . n B 2 17 C 17 17 17 C C B . n B 2 18 U 18 17 17 U U B A n B 2 19 G 19 18 18 G G B . n B 2 20 G 20 19 19 G G B . n B 2 21 C 21 20 20 C C B . n B 2 22 C 22 20 20 C C B A n B 2 23 A 23 20 20 A A B B n B 2 24 A 24 21 21 A A B . n B 2 25 A 25 22 22 A A B . n B 2 26 G 26 23 23 G G B . n B 2 27 G 27 24 24 G G B . n B 2 28 C 28 25 25 C C B . n B 2 29 G 29 26 26 G G B . n B 2 30 C 30 27 27 C C B . n B 2 31 U 31 28 28 U U B . n B 2 32 G 32 29 29 G G B . n B 2 33 G 33 30 30 G G B . n B 2 34 G 34 31 31 G G B . n B 2 35 C 35 32 32 C C B . n B 2 36 C 36 33 33 C C B . n B 2 37 U 37 34 34 U U B . n B 2 38 A 38 35 35 A A B . n B 2 39 G 39 36 36 G G B . n B 2 40 G 40 37 37 G G B . n B 2 41 A 41 38 38 A A B . n B 2 42 C 42 39 39 C C B . n B 2 43 C 43 40 40 C C B . n B 2 44 C 44 41 41 C C B . n B 2 45 A 45 42 42 A A B . n B 2 46 G 46 43 43 G G B . n B 2 47 U 47 44 44 U U B . n B 2 48 C 48 45 45 C C B . n B 2 49 C 49 46 46 C C B . n B 2 50 C 50 47 47 C C B . n B 2 51 G 51 47 47 G G B A n B 2 52 U 52 47 47 U U B B n B 2 53 A 53 47 47 A A B C n B 2 54 G 54 47 47 G G B D n B 2 55 G 55 47 47 G G B E n B 2 56 G 56 47 47 G G B F n B 2 57 G 57 47 47 G G B G n B 2 58 U 58 47 47 U U B H n B 2 59 U 59 47 47 U U B I n B 2 60 C 60 48 48 C C B . n B 2 61 C 61 49 49 C C B . n B 2 62 A 62 50 50 A A B . n B 2 63 G 63 51 51 G G B . n B 2 64 G 64 52 52 G G B . n B 2 65 G 65 53 53 G G B . n B 2 66 U 66 54 54 U U B . n B 2 67 U 67 55 55 U U B . n B 2 68 C 68 56 56 C C B . n B 2 69 A 69 57 57 A A B . n B 2 70 A 70 58 58 A A B . n B 2 71 A 71 59 59 A A B . n B 2 72 U 72 60 60 U U B . n B 2 73 C 73 61 61 C C B . n B 2 74 C 74 62 62 C C B . n B 2 75 C 75 63 63 C C B . n B 2 76 U 76 64 64 U U B . n B 2 77 G 77 65 65 G G B . n B 2 78 C 78 66 66 C C B . n B 2 79 C 79 67 67 C C B . n B 2 80 C 80 68 68 C C B . n B 2 81 C 81 69 69 C C B . n B 2 82 U 82 70 70 U U B . n B 2 83 G 83 71 71 G G B . n B 2 84 C 84 72 72 C C B . n B 2 85 A 85 73 ? ? ? B . n B 2 86 C 86 74 ? ? ? B . n B 2 87 C 87 75 ? ? ? B . n B 2 88 A 88 76 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SAM 1 401 401 SAM SAM A . D 4 MG 1 101 101 MG MG B . E 4 MG 1 102 102 MG MG B . F 4 MG 1 103 103 MG MG B . G 4 MG 1 104 104 MG MG B . H 4 MG 1 105 105 MG MG B . I 5 HOH 1 501 501 HOH HOH A . I 5 HOH 2 502 502 HOH HOH A . I 5 HOH 3 503 503 HOH HOH A . I 5 HOH 4 504 504 HOH HOH A . I 5 HOH 5 505 505 HOH HOH A . I 5 HOH 6 506 506 HOH HOH A . I 5 HOH 7 507 507 HOH HOH A . I 5 HOH 8 508 508 HOH HOH A . I 5 HOH 9 509 509 HOH HOH A . I 5 HOH 10 510 510 HOH HOH A . I 5 HOH 11 511 511 HOH HOH A . I 5 HOH 12 512 512 HOH HOH A . I 5 HOH 13 513 513 HOH HOH A . I 5 HOH 14 514 514 HOH HOH A . I 5 HOH 15 515 515 HOH HOH A . I 5 HOH 16 516 516 HOH HOH A . I 5 HOH 17 517 517 HOH HOH A . I 5 HOH 18 518 518 HOH HOH A . I 5 HOH 19 519 519 HOH HOH A . I 5 HOH 20 520 520 HOH HOH A . I 5 HOH 21 521 521 HOH HOH A . I 5 HOH 22 522 522 HOH HOH A . I 5 HOH 23 523 523 HOH HOH A . J 5 HOH 1 601 601 HOH HOH B . J 5 HOH 2 602 602 HOH HOH B . J 5 HOH 3 603 603 HOH HOH B . J 5 HOH 4 604 604 HOH HOH B . J 5 HOH 5 605 605 HOH HOH B . J 5 HOH 6 606 606 HOH HOH B . J 5 HOH 7 607 607 HOH HOH B . J 5 HOH 8 608 608 HOH HOH B . J 5 HOH 9 609 609 HOH HOH B . J 5 HOH 10 610 610 HOH HOH B . J 5 HOH 11 611 611 HOH HOH B . J 5 HOH 12 612 612 HOH HOH B . J 5 HOH 13 613 613 HOH HOH B . J 5 HOH 14 614 614 HOH HOH B . J 5 HOH 15 615 615 HOH HOH B . J 5 HOH 16 616 616 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MLZ 82 A MLZ 82 ? LYS N-METHYL-LYSINE 2 A MLZ 83 A MLZ 83 ? LYS N-METHYL-LYSINE 3 A MLZ 233 A MLZ 233 ? LYS N-METHYL-LYSINE 4 A MLZ 318 A MLZ 318 ? LYS N-METHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4950 ? 1 MORE -58 ? 1 'SSA (A^2)' 27160 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OP1 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id A _pdbx_struct_conn_angle.ptnr1_label_seq_id 71 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id B _pdbx_struct_conn_angle.ptnr1_auth_comp_id A _pdbx_struct_conn_angle.ptnr1_auth_seq_id 59 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id J _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id B _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 610 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 81.9 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 4 'Structure model' 1 3 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' Advisory 7 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site 6 4 'Structure model' ndb_struct_conf_na 7 4 'Structure model' ndb_struct_na_base_pair 8 4 'Structure model' ndb_struct_na_base_pair_step 9 4 'Structure model' pdbx_distant_solvent_atoms 10 4 'Structure model' pdbx_struct_conn_angle 11 4 'Structure model' struct_conn 12 4 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.2 ? 1 ADSC 'data collection' Quantum ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 PHASER phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.521 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.086 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N1 B C 17 ? ? "C1'" B C 17 ? ? "C2'" B C 17 ? ? 103.91 112.00 -8.09 1.10 N 2 1 "C5'" B G 23 ? ? "C4'" B G 23 ? ? "C3'" B G 23 ? ? 106.24 115.20 -8.96 1.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 3 ? ? -67.39 97.58 2 1 ASN A 55 ? ? -74.01 35.12 3 1 PHE A 58 ? ? -170.79 148.39 4 1 LEU A 60 ? ? -90.08 52.75 5 1 ASP A 62 ? ? -100.42 58.62 6 1 LYS A 63 ? ? -58.18 171.70 7 1 LEU A 65 ? ? -29.05 -35.85 8 1 GLU A 66 ? ? 82.07 -0.43 9 1 GLU A 67 ? ? 149.53 -126.50 10 1 LYS A 69 ? ? -30.15 142.67 11 1 PRO A 129 ? ? -64.93 97.19 12 1 ILE A 173 ? ? -59.81 -2.83 13 1 ARG A 188 ? ? -56.97 -75.76 14 1 ILE A 189 ? ? -37.38 -29.84 15 1 LYS A 191 ? ? -88.60 38.21 16 1 LYS A 192 ? ? -137.28 -31.23 17 1 SER A 194 ? ? -105.07 52.12 18 1 LEU A 195 ? ? 39.98 -18.38 19 1 ALA A 216 ? ? -44.82 170.37 20 1 GLU A 254 ? ? -106.40 66.23 21 1 MET A 264 ? ? -119.78 78.82 22 1 LEU A 266 ? ? -161.45 54.40 23 1 PRO A 267 ? ? -38.27 -26.82 24 1 LYS A 272 ? ? -63.44 7.44 25 1 ASP A 297 ? ? -43.70 -96.34 26 1 LYS A 298 ? ? -39.13 -30.47 27 1 LYS A 305 ? ? -66.00 37.53 28 1 LYS A 306 ? ? -138.07 -33.86 29 1 CYS A 307 ? ? -177.21 -164.40 30 1 VAL A 311 ? ? -58.12 82.20 31 1 MLZ A 318 ? ? -170.51 149.17 32 1 PRO A 322 ? ? -46.01 99.43 33 1 ARG A 323 ? ? 105.98 -64.29 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G B 5 ? ? 0.058 'SIDE CHAIN' 2 1 G B 15 ? ? 0.077 'SIDE CHAIN' 3 1 C B 17 ? ? 0.067 'SIDE CHAIN' 4 1 G B 30 ? ? 0.053 'SIDE CHAIN' 5 1 A B 35 ? ? 0.061 'SIDE CHAIN' 6 1 G B 37 ? ? 0.057 'SIDE CHAIN' 7 1 G B 47 A ? 0.092 'SIDE CHAIN' 8 1 G B 47 D ? 0.060 'SIDE CHAIN' 9 1 U B 47 I ? 0.059 'SIDE CHAIN' 10 1 C B 56 ? ? 0.081 'SIDE CHAIN' # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 519 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.83 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LYS 335 ? A LYS 335 3 1 Y 1 A LYS 336 ? A LYS 336 4 1 Y 1 B A 73 ? B A 85 5 1 Y 1 B C 74 ? B C 86 6 1 Y 1 B C 75 ? B C 87 7 1 Y 1 B A 76 ? B A 88 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 MG MG MG N N 360 MLZ N N N N 361 MLZ CA C N S 362 MLZ CB C N N 363 MLZ CG C N N 364 MLZ CD C N N 365 MLZ CE C N N 366 MLZ NZ N N N 367 MLZ CM C N N 368 MLZ C C N N 369 MLZ O O N N 370 MLZ OXT O N N 371 MLZ H H N N 372 MLZ H2 H N N 373 MLZ HA H N N 374 MLZ HB2 H N N 375 MLZ HB3 H N N 376 MLZ HG2 H N N 377 MLZ HG3 H N N 378 MLZ HD2 H N N 379 MLZ HD3 H N N 380 MLZ HE2 H N N 381 MLZ HE3 H N N 382 MLZ HZ H N N 383 MLZ HCM1 H N N 384 MLZ HCM2 H N N 385 MLZ HCM3 H N N 386 MLZ HXT H N N 387 PHE N N N N 388 PHE CA C N S 389 PHE C C N N 390 PHE O O N N 391 PHE CB C N N 392 PHE CG C Y N 393 PHE CD1 C Y N 394 PHE CD2 C Y N 395 PHE CE1 C Y N 396 PHE CE2 C Y N 397 PHE CZ C Y N 398 PHE OXT O N N 399 PHE H H N N 400 PHE H2 H N N 401 PHE HA H N N 402 PHE HB2 H N N 403 PHE HB3 H N N 404 PHE HD1 H N N 405 PHE HD2 H N N 406 PHE HE1 H N N 407 PHE HE2 H N N 408 PHE HZ H N N 409 PHE HXT H N N 410 PRO N N N N 411 PRO CA C N S 412 PRO C C N N 413 PRO O O N N 414 PRO CB C N N 415 PRO CG C N N 416 PRO CD C N N 417 PRO OXT O N N 418 PRO H H N N 419 PRO HA H N N 420 PRO HB2 H N N 421 PRO HB3 H N N 422 PRO HG2 H N N 423 PRO HG3 H N N 424 PRO HD2 H N N 425 PRO HD3 H N N 426 PRO HXT H N N 427 SAM N N N N 428 SAM CA C N S 429 SAM C C N N 430 SAM O O N N 431 SAM OXT O N N 432 SAM CB C N N 433 SAM CG C N N 434 SAM SD S N S 435 SAM CE C N N 436 SAM "C5'" C N N 437 SAM "C4'" C N S 438 SAM "O4'" O N N 439 SAM "C3'" C N S 440 SAM "O3'" O N N 441 SAM "C2'" C N R 442 SAM "O2'" O N N 443 SAM "C1'" C N R 444 SAM N9 N Y N 445 SAM C8 C Y N 446 SAM N7 N Y N 447 SAM C5 C Y N 448 SAM C6 C Y N 449 SAM N6 N N N 450 SAM N1 N Y N 451 SAM C2 C Y N 452 SAM N3 N Y N 453 SAM C4 C Y N 454 SAM HN1 H N N 455 SAM HN2 H N N 456 SAM HA H N N 457 SAM HB1 H N N 458 SAM HB2 H N N 459 SAM HG1 H N N 460 SAM HG2 H N N 461 SAM HE1 H N N 462 SAM HE2 H N N 463 SAM HE3 H N N 464 SAM "H5'1" H N N 465 SAM "H5'2" H N N 466 SAM "H4'" H N N 467 SAM "H3'" H N N 468 SAM "HO3'" H N N 469 SAM "H2'" H N N 470 SAM "HO2'" H N N 471 SAM "H1'" H N N 472 SAM H8 H N N 473 SAM HN61 H N N 474 SAM HN62 H N N 475 SAM H2 H N N 476 SER N N N N 477 SER CA C N S 478 SER C C N N 479 SER O O N N 480 SER CB C N N 481 SER OG O N N 482 SER OXT O N N 483 SER H H N N 484 SER H2 H N N 485 SER HA H N N 486 SER HB2 H N N 487 SER HB3 H N N 488 SER HG H N N 489 SER HXT H N N 490 THR N N N N 491 THR CA C N S 492 THR C C N N 493 THR O O N N 494 THR CB C N R 495 THR OG1 O N N 496 THR CG2 C N N 497 THR OXT O N N 498 THR H H N N 499 THR H2 H N N 500 THR HA H N N 501 THR HB H N N 502 THR HG1 H N N 503 THR HG21 H N N 504 THR HG22 H N N 505 THR HG23 H N N 506 THR HXT H N N 507 TRP N N N N 508 TRP CA C N S 509 TRP C C N N 510 TRP O O N N 511 TRP CB C N N 512 TRP CG C Y N 513 TRP CD1 C Y N 514 TRP CD2 C Y N 515 TRP NE1 N Y N 516 TRP CE2 C Y N 517 TRP CE3 C Y N 518 TRP CZ2 C Y N 519 TRP CZ3 C Y N 520 TRP CH2 C Y N 521 TRP OXT O N N 522 TRP H H N N 523 TRP H2 H N N 524 TRP HA H N N 525 TRP HB2 H N N 526 TRP HB3 H N N 527 TRP HD1 H N N 528 TRP HE1 H N N 529 TRP HE3 H N N 530 TRP HZ2 H N N 531 TRP HZ3 H N N 532 TRP HH2 H N N 533 TRP HXT H N N 534 TYR N N N N 535 TYR CA C N S 536 TYR C C N N 537 TYR O O N N 538 TYR CB C N N 539 TYR CG C Y N 540 TYR CD1 C Y N 541 TYR CD2 C Y N 542 TYR CE1 C Y N 543 TYR CE2 C Y N 544 TYR CZ C Y N 545 TYR OH O N N 546 TYR OXT O N N 547 TYR H H N N 548 TYR H2 H N N 549 TYR HA H N N 550 TYR HB2 H N N 551 TYR HB3 H N N 552 TYR HD1 H N N 553 TYR HD2 H N N 554 TYR HE1 H N N 555 TYR HE2 H N N 556 TYR HH H N N 557 TYR HXT H N N 558 U OP3 O N N 559 U P P N N 560 U OP1 O N N 561 U OP2 O N N 562 U "O5'" O N N 563 U "C5'" C N N 564 U "C4'" C N R 565 U "O4'" O N N 566 U "C3'" C N S 567 U "O3'" O N N 568 U "C2'" C N R 569 U "O2'" O N N 570 U "C1'" C N R 571 U N1 N N N 572 U C2 C N N 573 U O2 O N N 574 U N3 N N N 575 U C4 C N N 576 U O4 O N N 577 U C5 C N N 578 U C6 C N N 579 U HOP3 H N N 580 U HOP2 H N N 581 U "H5'" H N N 582 U "H5''" H N N 583 U "H4'" H N N 584 U "H3'" H N N 585 U "HO3'" H N N 586 U "H2'" H N N 587 U "HO2'" H N N 588 U "H1'" H N N 589 U H3 H N N 590 U H5 H N N 591 U H6 H N N 592 VAL N N N N 593 VAL CA C N S 594 VAL C C N N 595 VAL O O N N 596 VAL CB C N N 597 VAL CG1 C N N 598 VAL CG2 C N N 599 VAL OXT O N N 600 VAL H H N N 601 VAL H2 H N N 602 VAL HA H N N 603 VAL HB H N N 604 VAL HG11 H N N 605 VAL HG12 H N N 606 VAL HG13 H N N 607 VAL HG21 H N N 608 VAL HG22 H N N 609 VAL HG23 H N N 610 VAL HXT H N N 611 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 MLZ N CA sing N N 352 MLZ N H sing N N 353 MLZ N H2 sing N N 354 MLZ CA CB sing N N 355 MLZ CA C sing N N 356 MLZ CA HA sing N N 357 MLZ CB CG sing N N 358 MLZ CB HB2 sing N N 359 MLZ CB HB3 sing N N 360 MLZ CG CD sing N N 361 MLZ CG HG2 sing N N 362 MLZ CG HG3 sing N N 363 MLZ CD CE sing N N 364 MLZ CD HD2 sing N N 365 MLZ CD HD3 sing N N 366 MLZ CE NZ sing N N 367 MLZ CE HE2 sing N N 368 MLZ CE HE3 sing N N 369 MLZ NZ CM sing N N 370 MLZ NZ HZ sing N N 371 MLZ CM HCM1 sing N N 372 MLZ CM HCM2 sing N N 373 MLZ CM HCM3 sing N N 374 MLZ C O doub N N 375 MLZ C OXT sing N N 376 MLZ OXT HXT sing N N 377 PHE N CA sing N N 378 PHE N H sing N N 379 PHE N H2 sing N N 380 PHE CA C sing N N 381 PHE CA CB sing N N 382 PHE CA HA sing N N 383 PHE C O doub N N 384 PHE C OXT sing N N 385 PHE CB CG sing N N 386 PHE CB HB2 sing N N 387 PHE CB HB3 sing N N 388 PHE CG CD1 doub Y N 389 PHE CG CD2 sing Y N 390 PHE CD1 CE1 sing Y N 391 PHE CD1 HD1 sing N N 392 PHE CD2 CE2 doub Y N 393 PHE CD2 HD2 sing N N 394 PHE CE1 CZ doub Y N 395 PHE CE1 HE1 sing N N 396 PHE CE2 CZ sing Y N 397 PHE CE2 HE2 sing N N 398 PHE CZ HZ sing N N 399 PHE OXT HXT sing N N 400 PRO N CA sing N N 401 PRO N CD sing N N 402 PRO N H sing N N 403 PRO CA C sing N N 404 PRO CA CB sing N N 405 PRO CA HA sing N N 406 PRO C O doub N N 407 PRO C OXT sing N N 408 PRO CB CG sing N N 409 PRO CB HB2 sing N N 410 PRO CB HB3 sing N N 411 PRO CG CD sing N N 412 PRO CG HG2 sing N N 413 PRO CG HG3 sing N N 414 PRO CD HD2 sing N N 415 PRO CD HD3 sing N N 416 PRO OXT HXT sing N N 417 SAM N CA sing N N 418 SAM N HN1 sing N N 419 SAM N HN2 sing N N 420 SAM CA C sing N N 421 SAM CA CB sing N N 422 SAM CA HA sing N N 423 SAM C O doub N N 424 SAM C OXT sing N N 425 SAM CB CG sing N N 426 SAM CB HB1 sing N N 427 SAM CB HB2 sing N N 428 SAM CG SD sing N N 429 SAM CG HG1 sing N N 430 SAM CG HG2 sing N N 431 SAM SD CE sing N N 432 SAM SD "C5'" sing N N 433 SAM CE HE1 sing N N 434 SAM CE HE2 sing N N 435 SAM CE HE3 sing N N 436 SAM "C5'" "C4'" sing N N 437 SAM "C5'" "H5'1" sing N N 438 SAM "C5'" "H5'2" sing N N 439 SAM "C4'" "O4'" sing N N 440 SAM "C4'" "C3'" sing N N 441 SAM "C4'" "H4'" sing N N 442 SAM "O4'" "C1'" sing N N 443 SAM "C3'" "O3'" sing N N 444 SAM "C3'" "C2'" sing N N 445 SAM "C3'" "H3'" sing N N 446 SAM "O3'" "HO3'" sing N N 447 SAM "C2'" "O2'" sing N N 448 SAM "C2'" "C1'" sing N N 449 SAM "C2'" "H2'" sing N N 450 SAM "O2'" "HO2'" sing N N 451 SAM "C1'" N9 sing N N 452 SAM "C1'" "H1'" sing N N 453 SAM N9 C8 sing Y N 454 SAM N9 C4 sing Y N 455 SAM C8 N7 doub Y N 456 SAM C8 H8 sing N N 457 SAM N7 C5 sing Y N 458 SAM C5 C6 sing Y N 459 SAM C5 C4 doub Y N 460 SAM C6 N6 sing N N 461 SAM C6 N1 doub Y N 462 SAM N6 HN61 sing N N 463 SAM N6 HN62 sing N N 464 SAM N1 C2 sing Y N 465 SAM C2 N3 doub Y N 466 SAM C2 H2 sing N N 467 SAM N3 C4 sing Y N 468 SER N CA sing N N 469 SER N H sing N N 470 SER N H2 sing N N 471 SER CA C sing N N 472 SER CA CB sing N N 473 SER CA HA sing N N 474 SER C O doub N N 475 SER C OXT sing N N 476 SER CB OG sing N N 477 SER CB HB2 sing N N 478 SER CB HB3 sing N N 479 SER OG HG sing N N 480 SER OXT HXT sing N N 481 THR N CA sing N N 482 THR N H sing N N 483 THR N H2 sing N N 484 THR CA C sing N N 485 THR CA CB sing N N 486 THR CA HA sing N N 487 THR C O doub N N 488 THR C OXT sing N N 489 THR CB OG1 sing N N 490 THR CB CG2 sing N N 491 THR CB HB sing N N 492 THR OG1 HG1 sing N N 493 THR CG2 HG21 sing N N 494 THR CG2 HG22 sing N N 495 THR CG2 HG23 sing N N 496 THR OXT HXT sing N N 497 TRP N CA sing N N 498 TRP N H sing N N 499 TRP N H2 sing N N 500 TRP CA C sing N N 501 TRP CA CB sing N N 502 TRP CA HA sing N N 503 TRP C O doub N N 504 TRP C OXT sing N N 505 TRP CB CG sing N N 506 TRP CB HB2 sing N N 507 TRP CB HB3 sing N N 508 TRP CG CD1 doub Y N 509 TRP CG CD2 sing Y N 510 TRP CD1 NE1 sing Y N 511 TRP CD1 HD1 sing N N 512 TRP CD2 CE2 doub Y N 513 TRP CD2 CE3 sing Y N 514 TRP NE1 CE2 sing Y N 515 TRP NE1 HE1 sing N N 516 TRP CE2 CZ2 sing Y N 517 TRP CE3 CZ3 doub Y N 518 TRP CE3 HE3 sing N N 519 TRP CZ2 CH2 doub Y N 520 TRP CZ2 HZ2 sing N N 521 TRP CZ3 CH2 sing Y N 522 TRP CZ3 HZ3 sing N N 523 TRP CH2 HH2 sing N N 524 TRP OXT HXT sing N N 525 TYR N CA sing N N 526 TYR N H sing N N 527 TYR N H2 sing N N 528 TYR CA C sing N N 529 TYR CA CB sing N N 530 TYR CA HA sing N N 531 TYR C O doub N N 532 TYR C OXT sing N N 533 TYR CB CG sing N N 534 TYR CB HB2 sing N N 535 TYR CB HB3 sing N N 536 TYR CG CD1 doub Y N 537 TYR CG CD2 sing Y N 538 TYR CD1 CE1 sing Y N 539 TYR CD1 HD1 sing N N 540 TYR CD2 CE2 doub Y N 541 TYR CD2 HD2 sing N N 542 TYR CE1 CZ doub Y N 543 TYR CE1 HE1 sing N N 544 TYR CE2 CZ sing Y N 545 TYR CE2 HE2 sing N N 546 TYR CZ OH sing N N 547 TYR OH HH sing N N 548 TYR OXT HXT sing N N 549 U OP3 P sing N N 550 U OP3 HOP3 sing N N 551 U P OP1 doub N N 552 U P OP2 sing N N 553 U P "O5'" sing N N 554 U OP2 HOP2 sing N N 555 U "O5'" "C5'" sing N N 556 U "C5'" "C4'" sing N N 557 U "C5'" "H5'" sing N N 558 U "C5'" "H5''" sing N N 559 U "C4'" "O4'" sing N N 560 U "C4'" "C3'" sing N N 561 U "C4'" "H4'" sing N N 562 U "O4'" "C1'" sing N N 563 U "C3'" "O3'" sing N N 564 U "C3'" "C2'" sing N N 565 U "C3'" "H3'" sing N N 566 U "O3'" "HO3'" sing N N 567 U "C2'" "O2'" sing N N 568 U "C2'" "C1'" sing N N 569 U "C2'" "H2'" sing N N 570 U "O2'" "HO2'" sing N N 571 U "C1'" N1 sing N N 572 U "C1'" "H1'" sing N N 573 U N1 C2 sing N N 574 U N1 C6 sing N N 575 U C2 O2 doub N N 576 U C2 N3 sing N N 577 U N3 C4 sing N N 578 U N3 H3 sing N N 579 U C4 O4 doub N N 580 U C4 C5 sing N N 581 U C5 C6 doub N N 582 U C5 H5 sing N N 583 U C6 H6 sing N N 584 VAL N CA sing N N 585 VAL N H sing N N 586 VAL N H2 sing N N 587 VAL CA C sing N N 588 VAL CA CB sing N N 589 VAL CA HA sing N N 590 VAL C O doub N N 591 VAL C OXT sing N N 592 VAL CB CG1 sing N N 593 VAL CB CG2 sing N N 594 VAL CB HB sing N N 595 VAL CG1 HG11 sing N N 596 VAL CG1 HG12 sing N N 597 VAL CG1 HG13 sing N N 598 VAL CG2 HG21 sing N N 599 VAL CG2 HG22 sing N N 600 VAL CG2 HG23 sing N N 601 VAL OXT HXT sing N N 602 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2ZZM 'double helix' 2ZZM 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 2 1_555 B C 84 1_555 5.430 -0.955 -0.194 -17.095 -48.491 -28.719 1 B_C2:C72_B B 2 ? B 72 ? ? 9 1 B G 4 1_555 B U 82 1_555 6.230 -2.760 -0.837 1.361 -11.638 32.778 2 B_G4:U70_B B 4 ? B 70 ? ? ? 1 B G 5 1_555 B C 80 1_555 -2.108 -0.123 0.549 -8.627 -41.038 17.374 3 B_G5:C68_B B 5 ? B 68 ? ? 1 1 B G 6 1_555 B C 79 1_555 0.347 -0.342 1.842 16.141 3.291 7.623 4 B_G6:C67_B B 6 ? B 67 ? 19 1 1 B G 7 1_555 B C 78 1_555 -0.261 0.012 0.389 -1.156 2.081 -12.360 5 B_G7:C66_B B 7 ? B 66 ? 19 1 1 B C 61 1_555 B G 77 1_555 1.271 0.121 0.153 19.238 -0.174 -3.132 6 B_C49:G65_B B 49 ? B 65 ? 19 1 1 B A 41 1_555 B C 35 1_555 -4.628 -0.824 -0.073 16.702 -3.711 9.085 7 B_A38:C32_B B 38 ? B 32 ? ? 1 1 B C 42 1_555 B G 34 1_555 0.251 -0.118 -0.066 11.674 -10.971 2.849 8 B_C39:G31_B B 39 ? B 31 ? 19 1 1 B C 43 1_555 B G 33 1_555 0.299 -0.211 0.121 4.589 -9.469 2.917 9 B_C40:G30_B B 40 ? B 30 ? 19 1 1 B C 44 1_555 B G 32 1_555 -0.093 -0.247 0.251 -5.642 -0.364 1.226 10 B_C41:G29_B B 41 ? B 29 ? 19 1 1 B A 45 1_555 B U 31 1_555 0.077 -0.307 0.294 2.128 3.653 3.738 11 B_A42:U28_B B 42 ? B 28 ? 20 1 1 B G 46 1_555 B C 30 1_555 0.069 -0.010 -0.118 -6.093 -15.792 3.775 12 B_G43:C27_B B 43 ? B 27 ? 19 1 1 B U 47 1_555 B G 29 1_555 2.381 -0.191 -0.130 -10.681 -11.457 2.674 13 B_U44:G26_B B 44 ? B 26 ? 28 1 1 B G 10 1_555 B C 28 1_555 -0.437 -0.197 -0.282 -7.220 -8.168 -1.884 14 B_G10:C25_B B 10 ? B 25 ? 19 1 1 B C 11 1_555 B G 27 1_555 0.034 -0.181 0.157 -5.825 -8.583 -1.199 15 B_C11:G24_B B 11 ? B 24 ? 19 1 1 B C 12 1_555 B G 26 1_555 0.285 -0.362 -0.491 1.972 -10.406 -4.512 16 B_C12:G23_B B 12 ? B 23 ? 19 1 1 B A 13 1_555 B A 25 1_555 6.810 -3.594 -0.091 -0.402 1.360 4.816 17 B_A13:A22_B B 13 ? B 22 ? ? 5 1 B A 14 1_555 B U 8 1_555 -4.008 -1.967 0.454 4.989 2.906 -97.217 18 B_A14:U8_B B 14 ? B 8 ? 24 4 1 B G 15 1_555 B C 60 1_555 0.198 3.824 0.252 1.916 9.698 155.381 19 B_G15:C48_B B 15 ? B 48 ? 22 2 1 B G 19 1_555 B U 67 1_555 -0.248 5.784 -0.622 -15.027 -21.195 96.063 20 B_G18:U55_B B 18 ? B 55 ? ? 6 1 B A 70 1_555 B U 66 1_555 -4.460 -1.857 1.210 14.529 22.144 -102.167 21 B_A58:U54_B B 58 ? B 54 ? 24 4 1 B C 73 1_555 B G 65 1_555 0.254 -0.152 0.203 7.252 -21.469 -1.207 22 B_C61:G53_B B 61 ? B 53 ? 19 1 1 B C 74 1_555 B G 64 1_555 0.114 -0.120 0.097 -2.954 -16.467 0.138 23 B_C62:G52_B B 62 ? B 52 ? 19 1 1 B C 75 1_555 B G 63 1_555 0.878 0.081 -0.974 -1.796 -23.136 -32.265 24 B_C63:G51_B B 63 ? B 51 ? ? 1 1 B G 20 1_555 B C 68 1_555 0.364 0.061 -1.103 -38.301 -27.488 -1.567 25 B_G19:C56_B B 19 ? B 56 ? 19 1 1 B G 54 1_555 B G 51 1_555 -7.666 -5.460 0.970 -12.015 -13.332 -48.264 26 B_G47D:G47A_B B 47 D B 47 A ? ? 1 B G 55 1_555 B C 50 1_555 0.110 -0.118 -0.025 0.441 6.291 1.556 27 B_G47E:C47_B B 47 E B 47 ? 19 1 1 B G 56 1_555 B C 49 1_555 -0.349 0.145 -0.210 -6.129 -12.240 8.026 28 B_G47F:C46_B B 47 F B 46 ? 19 1 1 B G 57 1_555 B C 48 1_555 -0.518 -0.171 -0.331 -12.333 -15.927 1.307 29 B_G47G:C45_B B 47 G B 45 ? 19 1 1 B U 58 1_555 B A 23 1_555 3.974 -2.148 0.112 -6.457 4.366 -93.923 30 B_U47H:A20B_B B 47 H B 20 B 24 4 1 B U 59 1_555 B A 24 1_555 3.949 -2.271 -1.130 2.023 -42.242 -94.049 31 B_U47I:A21_B B 47 I B 21 ? 24 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B G 4 1_555 B U 82 1_555 B G 5 1_555 B C 80 1_555 1.396 -5.557 2.618 -2.889 49.543 4.532 -3.641 -1.485 -5.358 84.968 4.954 49.821 1 BB_G4G5:C68U70_BB B 4 ? B 70 ? B 5 ? B 68 ? 1 B G 5 1_555 B C 80 1_555 B G 6 1_555 B C 79 1_555 0.379 -1.659 3.325 -18.151 -21.284 35.916 0.009 -2.340 3.273 -29.624 25.263 45.239 2 BB_G5G6:C67C68_BB B 5 ? B 68 ? B 6 ? B 67 ? 1 B G 6 1_555 B C 79 1_555 B G 7 1_555 B C 78 1_555 -1.439 -2.677 3.581 12.096 14.001 27.433 -6.688 4.238 1.359 26.097 -22.545 32.990 3 BB_G6G7:C66C67_BB B 6 ? B 67 ? B 7 ? B 66 ? 1 B G 7 1_555 B C 78 1_555 B C 61 1_555 B G 77 1_555 0.342 -1.911 2.799 0.167 2.132 40.594 -2.950 -0.477 2.701 3.071 -0.240 40.647 4 BB_G7C49:G65C66_BB B 7 ? B 66 ? B 49 ? B 65 ? 1 B A 41 1_555 B C 35 1_555 B C 42 1_555 B G 34 1_555 -0.681 -0.988 3.285 -4.924 5.865 53.064 -1.463 0.447 3.214 6.526 5.479 53.574 5 BB_A38C39:G31C32_BB B 38 ? B 32 ? B 39 ? B 31 ? 1 B C 42 1_555 B G 34 1_555 B C 43 1_555 B G 33 1_555 -0.933 -2.185 3.444 -6.638 5.124 31.912 -4.749 0.481 3.189 9.125 11.821 32.967 6 BB_C39C40:G30G31_BB B 39 ? B 31 ? B 40 ? B 30 ? 1 B C 43 1_555 B G 33 1_555 B C 44 1_555 B G 32 1_555 -0.672 -2.259 3.314 -3.743 8.917 28.396 -6.070 0.586 2.568 17.546 7.364 29.966 7 BB_C40C41:G29G30_BB B 40 ? B 30 ? B 41 ? B 29 ? 1 B C 44 1_555 B G 32 1_555 B A 45 1_555 B U 31 1_555 0.080 -1.854 2.860 -0.812 7.037 29.776 -4.644 -0.282 2.367 13.456 1.552 30.589 8 BB_C41A42:U28G29_BB B 41 ? B 29 ? B 42 ? B 28 ? 1 B A 45 1_555 B U 31 1_555 B G 46 1_555 B C 30 1_555 0.110 -1.848 3.389 4.329 12.480 32.761 -4.794 0.423 2.533 21.089 -7.315 35.256 9 BB_A42G43:C27U28_BB B 42 ? B 28 ? B 43 ? B 27 ? 1 B G 46 1_555 B C 30 1_555 B U 47 1_555 B G 29 1_555 0.012 -1.093 3.336 2.469 3.649 42.353 -1.876 0.235 3.231 5.034 -3.406 42.571 10 BB_G43U44:G26C27_BB B 43 ? B 27 ? B 44 ? B 26 ? 1 B U 47 1_555 B G 29 1_555 B G 10 1_555 B C 28 1_555 -3.493 -1.049 3.340 8.976 10.266 52.191 -1.741 4.368 2.518 11.448 -10.009 53.822 11 BB_U44G10:C25G26_BB B 44 ? B 26 ? B 10 ? B 25 ? 1 B G 10 1_555 B C 28 1_555 B C 11 1_555 B G 27 1_555 -0.825 -1.895 3.202 -3.061 -2.242 36.747 -2.687 0.886 3.363 -3.544 4.840 36.936 12 BB_G10C11:G24C25_BB B 10 ? B 25 ? B 11 ? B 24 ? 1 B C 11 1_555 B G 27 1_555 B C 12 1_555 B G 26 1_555 0.486 -2.008 3.041 7.841 5.091 28.960 -4.747 0.486 2.693 9.860 -15.187 30.400 13 BB_C11C12:G23G24_BB B 11 ? B 24 ? B 12 ? B 23 ? 1 B C 12 1_555 B G 26 1_555 B A 13 1_555 B A 25 1_555 0.587 -0.675 3.483 2.115 6.601 60.996 -0.991 -0.470 3.417 6.480 -2.076 61.351 14 BB_C12A13:A22G23_BB B 12 ? B 23 ? B 13 ? B 22 ? 1 B A 13 1_555 B A 25 1_555 B A 14 1_555 B U 8 1_555 -1.378 -2.690 3.069 0.617 -2.321 43.175 -3.433 1.928 3.183 -3.152 -0.838 43.239 15 BB_A13A14:U8A22_BB B 13 ? B 22 ? B 14 ? B 8 ? 1 B A 14 1_555 B U 8 1_555 B G 15 1_555 B C 60 1_555 1.967 -3.234 3.000 7.485 8.763 -73.441 2.422 1.851 3.130 -7.284 6.222 -74.213 16 BB_A14G15:C48U8_BB B 14 ? B 8 ? B 15 ? B 48 ? 1 B G 19 1_555 B U 67 1_555 B A 70 1_555 B U 66 1_555 -2.531 -2.530 -2.362 159.713 -62.594 13.493 -1.929 -0.416 -1.702 -32.659 -83.331 171.600 17 BB_G18A58:U54U55_BB B 18 ? B 55 ? B 58 ? B 54 ? 1 B A 70 1_555 B U 66 1_555 B C 73 1_555 B G 65 1_555 2.144 -2.529 3.608 0.391 2.137 89.730 -1.840 -1.511 3.568 1.515 -0.277 89.751 18 BB_A58C61:G53U54_BB B 58 ? B 54 ? B 61 ? B 53 ? 1 B C 73 1_555 B G 65 1_555 B C 74 1_555 B G 64 1_555 -1.173 -2.369 3.457 -4.212 7.777 29.847 -5.895 1.388 2.897 14.697 7.959 31.101 19 BB_C61C62:G52G53_BB B 61 ? B 53 ? B 62 ? B 52 ? 1 B C 74 1_555 B G 64 1_555 B C 75 1_555 B G 63 1_555 -3.018 -1.062 3.010 2.043 12.380 35.663 -2.993 4.889 2.355 19.485 -3.215 37.738 20 BB_C62C63:G51G52_BB B 62 ? B 52 ? B 63 ? B 51 ? 1 B G 54 1_555 B G 51 1_555 B G 55 1_555 B C 50 1_555 3.938 -1.637 3.035 1.115 15.020 58.446 -2.285 -3.878 2.649 15.109 -1.122 60.189 21 BB_G47DG47E:C47G47A_BB B 47 D B 47 A B 47 E B 47 ? 1 B G 55 1_555 B C 50 1_555 B G 56 1_555 B C 49 1_555 0.448 -1.960 3.508 1.724 11.083 28.874 -5.755 -0.516 2.617 21.241 -3.304 30.933 22 BB_G47EG47F:C46C47_BB B 47 E B 47 ? B 47 F B 46 ? 1 B G 56 1_555 B C 49 1_555 B G 57 1_555 B C 48 1_555 0.118 -1.548 3.297 2.535 8.941 34.007 -3.824 0.164 2.814 14.944 -4.236 35.218 23 BB_G47FG47G:C45C46_BB B 47 F B 46 ? B 47 G B 45 ? 1 B G 57 1_555 B C 48 1_555 B U 58 1_555 B A 23 1_555 -1.531 -1.814 3.047 -0.207 3.550 86.633 -1.394 1.111 2.989 2.587 0.151 86.691 24 BB_G47GU47H:A20BC45_BB B 47 G B 45 ? B 47 H B 20 B 1 B U 58 1_555 B A 23 1_555 B U 59 1_555 B A 24 1_555 -4.082 -1.995 3.544 1.630 17.645 6.866 -11.470 12.870 -0.915 68.695 -6.344 18.994 25 BB_U47HU47I:A21A20B_BB B 47 H B 20 B B 47 I B 21 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 S-ADENOSYLMETHIONINE SAM 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 2YX1 'PDB ENTRY 2yx1 and 1wz2' 2 ? 'experimental model' PDB 1WZ2 'PDB ENTRY 2yx1 and 1wz2' #