data_2ATF # _entry.id 2ATF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2ATF RCSB RCSB034289 WWPDB D_1000034289 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id GO.35683 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2ATF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-08-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wesenberg, G.E.' 1 'Phillips Jr., G.N.' 2 'Mccoy, J.G.' 3 'Bitto, E.' 4 'Bingman, C.A.' 5 'Allard, S.T.M.' 6 'Center for Eukaryotic Structural Genomics (CESG)' 7 # _citation.id primary _citation.title 'Structure and mechanism of mouse cysteine dioxygenase.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 103 _citation.page_first 3084 _citation.page_last 3089 _citation.year 2006 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16492780 _citation.pdbx_database_id_DOI 10.1073/pnas.0509262103 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'McCoy, J.G.' 1 primary 'Bailey, L.J.' 2 primary 'Bitto, E.' 3 primary 'Bingman, C.A.' 4 primary 'Aceti, D.J.' 5 primary 'Fox, B.G.' 6 primary 'Phillips, G.N.' 7 # _cell.entry_id 2ATF _cell.length_a 57.550 _cell.length_b 57.550 _cell.length_c 122.076 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ATF _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cysteine dioxygenase type I' 23155.457 1 1.13.11.20 ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 188 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CDO, CDO-I' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SERTELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKFDQYRYTRNLVDQGNGKFNL(MSE)ILC WGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNE(MSE)IKKSERTLRENQCAYINDSIGLHRVENVSHTEPAV SLHLYSPPFDTCHAFDQRTGHKNKVT(MSE)TFHSKFGIRTPFTTSGSLENN ; _entity_poly.pdbx_seq_one_letter_code_can ;SERTELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKFDQYRYTRNLVDQGNGKFNLMILCWGEG HGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPP FDTCHAFDQRTGHKNKVTMTFHSKFGIRTPFTTSGSLENN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier GO.35683 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLU n 1 3 ARG n 1 4 THR n 1 5 GLU n 1 6 LEU n 1 7 LEU n 1 8 LYS n 1 9 PRO n 1 10 ARG n 1 11 THR n 1 12 LEU n 1 13 ALA n 1 14 ASP n 1 15 LEU n 1 16 ILE n 1 17 ARG n 1 18 ILE n 1 19 LEU n 1 20 HIS n 1 21 GLU n 1 22 LEU n 1 23 PHE n 1 24 ALA n 1 25 GLY n 1 26 ASP n 1 27 GLU n 1 28 VAL n 1 29 ASN n 1 30 VAL n 1 31 GLU n 1 32 GLU n 1 33 VAL n 1 34 GLN n 1 35 ALA n 1 36 VAL n 1 37 LEU n 1 38 GLU n 1 39 ALA n 1 40 TYR n 1 41 GLU n 1 42 SER n 1 43 ASN n 1 44 PRO n 1 45 ALA n 1 46 GLU n 1 47 TRP n 1 48 ALA n 1 49 LEU n 1 50 TYR n 1 51 ALA n 1 52 LYS n 1 53 PHE n 1 54 ASP n 1 55 GLN n 1 56 TYR n 1 57 ARG n 1 58 TYR n 1 59 THR n 1 60 ARG n 1 61 ASN n 1 62 LEU n 1 63 VAL n 1 64 ASP n 1 65 GLN n 1 66 GLY n 1 67 ASN n 1 68 GLY n 1 69 LYS n 1 70 PHE n 1 71 ASN n 1 72 LEU n 1 73 MSE n 1 74 ILE n 1 75 LEU n 1 76 CYS n 1 77 TRP n 1 78 GLY n 1 79 GLU n 1 80 GLY n 1 81 HIS n 1 82 GLY n 1 83 SER n 1 84 SER n 1 85 ILE n 1 86 HIS n 1 87 ASP n 1 88 HIS n 1 89 THR n 1 90 ASP n 1 91 SER n 1 92 HIS n 1 93 CYS n 1 94 PHE n 1 95 LEU n 1 96 LYS n 1 97 LEU n 1 98 LEU n 1 99 GLN n 1 100 GLY n 1 101 ASN n 1 102 LEU n 1 103 LYS n 1 104 GLU n 1 105 THR n 1 106 LEU n 1 107 PHE n 1 108 ASP n 1 109 TRP n 1 110 PRO n 1 111 ASP n 1 112 LYS n 1 113 LYS n 1 114 SER n 1 115 ASN n 1 116 GLU n 1 117 MSE n 1 118 ILE n 1 119 LYS n 1 120 LYS n 1 121 SER n 1 122 GLU n 1 123 ARG n 1 124 THR n 1 125 LEU n 1 126 ARG n 1 127 GLU n 1 128 ASN n 1 129 GLN n 1 130 CYS n 1 131 ALA n 1 132 TYR n 1 133 ILE n 1 134 ASN n 1 135 ASP n 1 136 SER n 1 137 ILE n 1 138 GLY n 1 139 LEU n 1 140 HIS n 1 141 ARG n 1 142 VAL n 1 143 GLU n 1 144 ASN n 1 145 VAL n 1 146 SER n 1 147 HIS n 1 148 THR n 1 149 GLU n 1 150 PRO n 1 151 ALA n 1 152 VAL n 1 153 SER n 1 154 LEU n 1 155 HIS n 1 156 LEU n 1 157 TYR n 1 158 SER n 1 159 PRO n 1 160 PRO n 1 161 PHE n 1 162 ASP n 1 163 THR n 1 164 CYS n 1 165 HIS n 1 166 ALA n 1 167 PHE n 1 168 ASP n 1 169 GLN n 1 170 ARG n 1 171 THR n 1 172 GLY n 1 173 HIS n 1 174 LYS n 1 175 ASN n 1 176 LYS n 1 177 VAL n 1 178 THR n 1 179 MSE n 1 180 THR n 1 181 PHE n 1 182 HIS n 1 183 SER n 1 184 LYS n 1 185 PHE n 1 186 GLY n 1 187 ILE n 1 188 ARG n 1 189 THR n 1 190 PRO n 1 191 PHE n 1 192 THR n 1 193 THR n 1 194 SER n 1 195 GLY n 1 196 SER n 1 197 LEU n 1 198 GLU n 1 199 ASN n 1 200 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Cdo1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834 P(RARE2)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PVP 16' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CDO1_MOUSE _struct_ref.pdbx_db_accession P60334 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MERTELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKFDQYRYTRNLVDQGNGKFNLMILCWGEG HGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPP FDTCHAFDQRTGHKNKVTMTFHSKFGIRTPFTTSGSLENN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2ATF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 200 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P60334 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 200 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 200 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2ATF SER A 1 ? UNP P60334 MET 1 'EXPRESSION TAG' 1 1 1 2ATF MSE A 73 ? UNP P60334 MET 73 'MODIFIED RESIDUE' 73 2 1 2ATF MSE A 117 ? UNP P60334 MET 117 'MODIFIED RESIDUE' 117 3 1 2ATF MSE A 179 ? UNP P60334 MET 179 'MODIFIED RESIDUE' 179 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ATF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 43.6 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 273 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '10 MG/ML PROTEIN, 20% MPEG 5K, 0.16 M CALCIUM CHLORIDE, 0.10 M MES, pH 6.0, vapor diffusion, hanging drop, temperature 273K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 3 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2005-08-09 _diffrn_detector.details 'PAIR OF BIMORPH, RHODIUM COATED KIRKPATRICK-BAEZ MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'INDIRECT LIQUID NITROGEN COOLED DOUBLE CRYSTAL MONOCHROMATOR WITH SI-111 CRYSTALS' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97915 1.0 2 0.97933 1.0 3 0.96392 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97915, 0.97933, 0.96392' # _reflns.entry_id 2ATF _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.75 _reflns.number_obs 21529 _reflns.number_all ? _reflns.percent_possible_obs 100.000 _reflns.pdbx_Rmerge_I_obs 0.118 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.888 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 14.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.27 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.250 _reflns_shell.pdbx_redundancy 13.800 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2ATF _refine.ls_number_reflns_obs 20362 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.86 _refine.ls_d_res_high 1.75 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.18071 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17885 _refine.ls_R_factor_R_free 0.21555 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1101 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 19.118 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS, SELENIUM C COEFFICIENT FOR STRUCTURE FACTOR CALCULATION SET TO -9.00, MOLPROBITY USED TO ASSIST IN FINAL MODEL BUILDING. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.117 _refine.pdbx_overall_ESU_R_Free 0.113 _refine.overall_SU_ML 0.067 _refine.overall_SU_B 2.025 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1585 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 188 _refine_hist.number_atoms_total 1778 _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 33.86 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.021 ? 1641 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.764 1.938 ? 2238 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.338 5.000 ? 211 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.991 23.933 ? 89 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.481 15.000 ? 291 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.865 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.152 0.200 ? 238 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 1285 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.215 0.200 ? 724 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.309 0.200 ? 1089 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.161 0.200 ? 170 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.179 0.200 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.116 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.400 1.500 ? 1007 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.019 2.000 ? 1576 'X-RAY DIFFRACTION' ? r_scbond_it 2.971 3.000 ? 724 'X-RAY DIFFRACTION' ? r_scangle_it 4.429 4.500 ? 649 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.750 _refine_ls_shell.d_res_low 1.795 _refine_ls_shell.number_reflns_R_work 1483 _refine_ls_shell.R_factor_R_work 0.195 _refine_ls_shell.percent_reflns_obs 99.94 _refine_ls_shell.R_factor_R_free 0.299 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ATF _struct.title 'X-RAY STRUCTURE OF cysteine dioxygenase type I FROM MUS MUSCULUS MM.241056' _struct.pdbx_descriptor 'X-RAY STRUCTURE OF cysteine dioxygenase type I FROM MUS MUSCULUS MM.241056' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Mm.241056, pfam05995.2 CDO_I, BC013638, CUPIN FAMILY, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, Center for Eukaryotic Structural Genomics, CESG, OXIDOREDUCTASE ; _struct_keywords.entry_id 2ATF _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? PHE A 23 ? THR A 11 PHE A 23 1 ? 13 HELX_P HELX_P2 2 ASN A 29 ? TYR A 40 ? ASN A 29 TYR A 40 1 ? 12 HELX_P HELX_P3 3 ASN A 43 ? ALA A 48 ? ASN A 43 ALA A 48 1 ? 6 HELX_P HELX_P4 4 LEU A 49 ? ALA A 51 ? LEU A 49 ALA A 51 5 ? 3 HELX_P HELX_P5 5 GLN A 65 ? LYS A 69 ? GLN A 65 LYS A 69 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 86 NE2 ? ? ? 1_555 B NI . NI ? ? A HIS 86 A NI 201 1_555 ? ? ? ? ? ? ? 2.085 ? metalc2 metalc ? ? A HIS 88 NE2 ? ? ? 1_555 B NI . NI ? ? A HIS 88 A NI 201 1_555 ? ? ? ? ? ? ? 2.104 ? metalc3 metalc ? ? A HIS 140 NE2 ? ? ? 1_555 B NI . NI ? ? A HIS 140 A NI 201 1_555 ? ? ? ? ? ? ? 2.082 ? metalc4 metalc ? ? B NI . NI ? ? ? 1_555 D HOH . O ? ? A NI 201 A HOH 360 1_555 ? ? ? ? ? ? ? 2.361 ? metalc5 metalc ? ? B NI . NI ? ? ? 1_555 D HOH . O ? ? A NI 201 A HOH 361 1_555 ? ? ? ? ? ? ? 2.385 ? metalc6 metalc ? ? B NI . NI ? ? ? 1_555 D HOH . O ? ? A NI 201 A HOH 359 1_555 ? ? ? ? ? ? ? 2.161 ? covale1 covale ? ? A LEU 72 C ? ? ? 1_555 A MSE 73 N ? ? A LEU 72 A MSE 73 1_555 ? ? ? ? ? ? ? 1.336 ? covale2 covale ? ? A MSE 73 C ? ? ? 1_555 A ILE 74 N ? ? A MSE 73 A ILE 74 1_555 ? ? ? ? ? ? ? 1.339 ? covale3 covale ? ? A GLU 116 C ? ? ? 1_555 A MSE 117 N ? ? A GLU 116 A MSE 117 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 117 C ? ? ? 1_555 A ILE 118 N ? ? A MSE 117 A ILE 118 1_555 ? ? ? ? ? ? ? 1.316 ? covale5 covale ? ? A THR 178 C ? ? ? 1_555 A MSE 179 N ? ? A THR 178 A MSE 179 1_555 ? ? ? ? ? ? ? 1.314 ? covale6 covale ? ? A MSE 179 C ? ? ? 1_555 A THR 180 N ? ? A MSE 179 A THR 180 1_555 ? ? ? ? ? ? ? 1.314 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 158 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 158 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 159 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 159 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.86 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 130 ? ILE A 133 ? CYS A 130 ILE A 133 A 2 HIS A 92 ? GLN A 99 ? HIS A 92 GLN A 99 A 3 ALA A 151 ? SER A 158 ? ALA A 151 SER A 158 A 4 ASN A 71 ? TRP A 77 ? ASN A 71 TRP A 77 A 5 THR A 59 ? ASP A 64 ? THR A 59 ASP A 64 A 6 SER A 183 ? LYS A 184 ? SER A 183 LYS A 184 A 7 ILE A 187 ? ARG A 188 ? ILE A 187 ARG A 188 B 1 ILE A 85 ? HIS A 86 ? ILE A 85 HIS A 86 B 2 THR A 163 ? PHE A 167 ? THR A 163 PHE A 167 B 3 LYS A 174 ? THR A 178 ? LYS A 174 THR A 178 C 1 SER A 121 ? LEU A 125 ? SER A 121 LEU A 125 C 2 LEU A 102 ? PHE A 107 ? LEU A 102 PHE A 107 C 3 LEU A 139 ? GLU A 143 ? LEU A 139 GLU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 131 ? O ALA A 131 N LEU A 95 ? N LEU A 95 A 2 3 N LYS A 96 ? N LYS A 96 O LEU A 154 ? O LEU A 154 A 3 4 O HIS A 155 ? O HIS A 155 N MSE A 73 ? N MSE A 73 A 4 5 O LEU A 72 ? O LEU A 72 N VAL A 63 ? N VAL A 63 A 5 6 N LEU A 62 ? N LEU A 62 O SER A 183 ? O SER A 183 A 6 7 N LYS A 184 ? N LYS A 184 O ILE A 187 ? O ILE A 187 B 1 2 N ILE A 85 ? N ILE A 85 O PHE A 167 ? O PHE A 167 B 2 3 N CYS A 164 ? N CYS A 164 O VAL A 177 ? O VAL A 177 C 1 2 O ARG A 123 ? O ARG A 123 N GLU A 104 ? N GLU A 104 C 2 3 N LYS A 103 ? N LYS A 103 O GLU A 143 ? O GLU A 143 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NI A 201' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 234' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 86 ? HIS A 86 . ? 1_555 ? 2 AC1 6 HIS A 88 ? HIS A 88 . ? 1_555 ? 3 AC1 6 HIS A 140 ? HIS A 140 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH A 359 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 360 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 361 . ? 1_555 ? 7 AC2 3 PHE A 161 ? PHE A 161 . ? 1_555 ? 8 AC2 3 ASP A 162 ? ASP A 162 . ? 1_555 ? 9 AC2 3 THR A 163 ? THR A 163 . ? 1_555 ? # _atom_sites.entry_id 2ATF _atom_sites.fract_transf_matrix[1][1] 0.017376 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017376 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008192 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 HIS 20 20 20 HIS HIS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 TRP 47 47 47 TRP TRP A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 MSE 73 73 73 MSE MSE A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 TRP 77 77 77 TRP TRP A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 HIS 81 81 81 HIS HIS A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 HIS 92 92 92 HIS HIS A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 MSE 117 117 117 MSE MSE A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLN 129 129 129 GLN GLN A . n A 1 130 CYS 130 130 130 CYS CYS A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 PRO 150 150 150 PRO PRO A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 CYS 164 164 164 CYS CYS A . n A 1 165 HIS 165 165 165 HIS HIS A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 ASP 168 168 168 ASP ASP A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 HIS 173 173 173 HIS HIS A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 MSE 179 179 179 MSE MSE A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 HIS 182 182 182 HIS HIS A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 PRO 190 190 190 PRO PRO A . n A 1 191 PHE 191 191 ? ? ? A . n A 1 192 THR 192 192 ? ? ? A . n A 1 193 THR 193 193 ? ? ? A . n A 1 194 SER 194 194 ? ? ? A . n A 1 195 GLY 195 195 ? ? ? A . n A 1 196 SER 196 196 ? ? ? A . n A 1 197 LEU 197 197 ? ? ? A . n A 1 198 GLU 198 198 ? ? ? A . n A 1 199 ASN 199 199 ? ? ? A . n A 1 200 ASN 200 200 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Center for Eukaryotic Structural Genomics' _pdbx_SG_project.initial_of_center CESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 201 1 NI NI A . C 3 EDO 1 234 234 EDO EDO A . D 4 HOH 1 235 2 HOH HOH A . D 4 HOH 2 236 3 HOH HOH A . D 4 HOH 3 237 4 HOH HOH A . D 4 HOH 4 238 5 HOH HOH A . D 4 HOH 5 239 6 HOH HOH A . D 4 HOH 6 240 7 HOH HOH A . D 4 HOH 7 241 8 HOH HOH A . D 4 HOH 8 242 9 HOH HOH A . D 4 HOH 9 243 10 HOH HOH A . D 4 HOH 10 244 11 HOH HOH A . D 4 HOH 11 245 12 HOH HOH A . D 4 HOH 12 246 13 HOH HOH A . D 4 HOH 13 247 14 HOH HOH A . D 4 HOH 14 248 15 HOH HOH A . D 4 HOH 15 249 16 HOH HOH A . D 4 HOH 16 250 17 HOH HOH A . D 4 HOH 17 251 18 HOH HOH A . D 4 HOH 18 252 19 HOH HOH A . D 4 HOH 19 253 20 HOH HOH A . D 4 HOH 20 254 21 HOH HOH A . D 4 HOH 21 255 22 HOH HOH A . D 4 HOH 22 256 23 HOH HOH A . D 4 HOH 23 257 24 HOH HOH A . D 4 HOH 24 258 25 HOH HOH A . D 4 HOH 25 259 26 HOH HOH A . D 4 HOH 26 260 27 HOH HOH A . D 4 HOH 27 261 28 HOH HOH A . D 4 HOH 28 262 29 HOH HOH A . D 4 HOH 29 263 30 HOH HOH A . D 4 HOH 30 264 31 HOH HOH A . D 4 HOH 31 265 32 HOH HOH A . D 4 HOH 32 266 33 HOH HOH A . D 4 HOH 33 267 34 HOH HOH A . D 4 HOH 34 268 35 HOH HOH A . D 4 HOH 35 269 36 HOH HOH A . D 4 HOH 36 270 37 HOH HOH A . D 4 HOH 37 271 38 HOH HOH A . D 4 HOH 38 272 39 HOH HOH A . D 4 HOH 39 273 41 HOH HOH A . D 4 HOH 40 274 42 HOH HOH A . D 4 HOH 41 275 43 HOH HOH A . D 4 HOH 42 276 44 HOH HOH A . D 4 HOH 43 277 46 HOH HOH A . D 4 HOH 44 278 47 HOH HOH A . D 4 HOH 45 279 48 HOH HOH A . D 4 HOH 46 280 49 HOH HOH A . D 4 HOH 47 281 50 HOH HOH A . D 4 HOH 48 282 51 HOH HOH A . D 4 HOH 49 283 53 HOH HOH A . D 4 HOH 50 284 54 HOH HOH A . D 4 HOH 51 285 55 HOH HOH A . D 4 HOH 52 286 56 HOH HOH A . D 4 HOH 53 287 57 HOH HOH A . D 4 HOH 54 288 58 HOH HOH A . D 4 HOH 55 289 59 HOH HOH A . D 4 HOH 56 290 60 HOH HOH A . D 4 HOH 57 291 61 HOH HOH A . D 4 HOH 58 292 62 HOH HOH A . D 4 HOH 59 293 63 HOH HOH A . D 4 HOH 60 294 64 HOH HOH A . D 4 HOH 61 295 65 HOH HOH A . D 4 HOH 62 296 66 HOH HOH A . D 4 HOH 63 297 67 HOH HOH A . D 4 HOH 64 298 69 HOH HOH A . D 4 HOH 65 299 70 HOH HOH A . D 4 HOH 66 300 71 HOH HOH A . D 4 HOH 67 301 73 HOH HOH A . D 4 HOH 68 302 74 HOH HOH A . D 4 HOH 69 303 75 HOH HOH A . D 4 HOH 70 304 76 HOH HOH A . D 4 HOH 71 305 77 HOH HOH A . D 4 HOH 72 306 78 HOH HOH A . D 4 HOH 73 307 79 HOH HOH A . D 4 HOH 74 308 81 HOH HOH A . D 4 HOH 75 309 82 HOH HOH A . D 4 HOH 76 310 83 HOH HOH A . D 4 HOH 77 311 84 HOH HOH A . D 4 HOH 78 312 85 HOH HOH A . D 4 HOH 79 313 88 HOH HOH A . D 4 HOH 80 314 89 HOH HOH A . D 4 HOH 81 315 90 HOH HOH A . D 4 HOH 82 316 91 HOH HOH A . D 4 HOH 83 317 92 HOH HOH A . D 4 HOH 84 318 93 HOH HOH A . D 4 HOH 85 319 94 HOH HOH A . D 4 HOH 86 320 95 HOH HOH A . D 4 HOH 87 321 96 HOH HOH A . D 4 HOH 88 322 98 HOH HOH A . D 4 HOH 89 323 100 HOH HOH A . D 4 HOH 90 324 101 HOH HOH A . D 4 HOH 91 325 102 HOH HOH A . D 4 HOH 92 326 103 HOH HOH A . D 4 HOH 93 327 104 HOH HOH A . D 4 HOH 94 328 105 HOH HOH A . D 4 HOH 95 329 107 HOH HOH A . D 4 HOH 96 330 111 HOH HOH A . D 4 HOH 97 331 112 HOH HOH A . D 4 HOH 98 332 113 HOH HOH A . D 4 HOH 99 333 114 HOH HOH A . D 4 HOH 100 334 115 HOH HOH A . D 4 HOH 101 335 116 HOH HOH A . D 4 HOH 102 336 117 HOH HOH A . D 4 HOH 103 337 120 HOH HOH A . D 4 HOH 104 338 124 HOH HOH A . D 4 HOH 105 339 125 HOH HOH A . D 4 HOH 106 340 126 HOH HOH A . D 4 HOH 107 341 127 HOH HOH A . D 4 HOH 108 342 129 HOH HOH A . D 4 HOH 109 343 130 HOH HOH A . D 4 HOH 110 344 134 HOH HOH A . D 4 HOH 111 345 135 HOH HOH A . D 4 HOH 112 346 137 HOH HOH A . D 4 HOH 113 347 143 HOH HOH A . D 4 HOH 114 348 144 HOH HOH A . D 4 HOH 115 349 146 HOH HOH A . D 4 HOH 116 350 147 HOH HOH A . D 4 HOH 117 351 151 HOH HOH A . D 4 HOH 118 352 152 HOH HOH A . D 4 HOH 119 353 154 HOH HOH A . D 4 HOH 120 354 155 HOH HOH A . D 4 HOH 121 355 156 HOH HOH A . D 4 HOH 122 356 157 HOH HOH A . D 4 HOH 123 357 158 HOH HOH A . D 4 HOH 124 358 159 HOH HOH A . D 4 HOH 125 359 160 HOH HOH A . D 4 HOH 126 360 161 HOH HOH A . D 4 HOH 127 361 162 HOH HOH A . D 4 HOH 128 362 163 HOH HOH A . D 4 HOH 129 363 164 HOH HOH A . D 4 HOH 130 364 165 HOH HOH A . D 4 HOH 131 365 166 HOH HOH A . D 4 HOH 132 366 167 HOH HOH A . D 4 HOH 133 367 168 HOH HOH A . D 4 HOH 134 368 169 HOH HOH A . D 4 HOH 135 369 170 HOH HOH A . D 4 HOH 136 370 171 HOH HOH A . D 4 HOH 137 371 172 HOH HOH A . D 4 HOH 138 372 173 HOH HOH A . D 4 HOH 139 373 174 HOH HOH A . D 4 HOH 140 374 175 HOH HOH A . D 4 HOH 141 375 176 HOH HOH A . D 4 HOH 142 376 177 HOH HOH A . D 4 HOH 143 377 178 HOH HOH A . D 4 HOH 144 378 179 HOH HOH A . D 4 HOH 145 379 180 HOH HOH A . D 4 HOH 146 380 181 HOH HOH A . D 4 HOH 147 381 182 HOH HOH A . D 4 HOH 148 382 183 HOH HOH A . D 4 HOH 149 383 184 HOH HOH A . D 4 HOH 150 384 185 HOH HOH A . D 4 HOH 151 385 186 HOH HOH A . D 4 HOH 152 386 187 HOH HOH A . D 4 HOH 153 387 188 HOH HOH A . D 4 HOH 154 388 189 HOH HOH A . D 4 HOH 155 389 191 HOH HOH A . D 4 HOH 156 390 192 HOH HOH A . D 4 HOH 157 391 193 HOH HOH A . D 4 HOH 158 392 194 HOH HOH A . D 4 HOH 159 393 197 HOH HOH A . D 4 HOH 160 394 198 HOH HOH A . D 4 HOH 161 395 199 HOH HOH A . D 4 HOH 162 396 201 HOH HOH A . D 4 HOH 163 397 203 HOH HOH A . D 4 HOH 164 398 204 HOH HOH A . D 4 HOH 165 399 205 HOH HOH A . D 4 HOH 166 400 206 HOH HOH A . D 4 HOH 167 401 207 HOH HOH A . D 4 HOH 168 402 208 HOH HOH A . D 4 HOH 169 403 210 HOH HOH A . D 4 HOH 170 404 211 HOH HOH A . D 4 HOH 171 405 213 HOH HOH A . D 4 HOH 172 406 214 HOH HOH A . D 4 HOH 173 407 215 HOH HOH A . D 4 HOH 174 408 216 HOH HOH A . D 4 HOH 175 409 217 HOH HOH A . D 4 HOH 176 410 218 HOH HOH A . D 4 HOH 177 411 219 HOH HOH A . D 4 HOH 178 412 220 HOH HOH A . D 4 HOH 179 413 222 HOH HOH A . D 4 HOH 180 414 224 HOH HOH A . D 4 HOH 181 415 225 HOH HOH A . D 4 HOH 182 416 226 HOH HOH A . D 4 HOH 183 417 227 HOH HOH A . D 4 HOH 184 418 228 HOH HOH A . D 4 HOH 185 419 230 HOH HOH A . D 4 HOH 186 420 231 HOH HOH A . D 4 HOH 187 421 232 HOH HOH A . D 4 HOH 188 422 233 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 73 A MSE 73 ? MET SELENOMETHIONINE 2 A MSE 117 A MSE 117 ? MET SELENOMETHIONINE 3 A MSE 179 A MSE 179 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 86 ? A HIS 86 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 98.7 ? 2 NE2 ? A HIS 86 ? A HIS 86 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 NE2 ? A HIS 140 ? A HIS 140 ? 1_555 95.3 ? 3 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 NE2 ? A HIS 140 ? A HIS 140 ? 1_555 93.3 ? 4 NE2 ? A HIS 86 ? A HIS 86 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 360 ? 1_555 86.6 ? 5 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 360 ? 1_555 170.9 ? 6 NE2 ? A HIS 140 ? A HIS 140 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 360 ? 1_555 93.6 ? 7 NE2 ? A HIS 86 ? A HIS 86 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 361 ? 1_555 88.6 ? 8 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 361 ? 1_555 87.8 ? 9 NE2 ? A HIS 140 ? A HIS 140 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 361 ? 1_555 175.8 ? 10 O ? D HOH . ? A HOH 360 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 361 ? 1_555 84.9 ? 11 NE2 ? A HIS 86 ? A HIS 86 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 359 ? 1_555 138.0 ? 12 NE2 ? A HIS 88 ? A HIS 88 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 359 ? 1_555 117.9 ? 13 NE2 ? A HIS 140 ? A HIS 140 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 359 ? 1_555 102.0 ? 14 O ? D HOH . ? A HOH 360 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 359 ? 1_555 54.6 ? 15 O ? D HOH . ? A HOH 361 ? 1_555 NI ? B NI . ? A NI 201 ? 1_555 O ? D HOH . ? A HOH 359 ? 1_555 74.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-10-18 2 'Structure model' 1 1 2007-10-16 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' # loop_ _diffrn_reflns.diffrn_id _diffrn_reflns.pdbx_d_res_low _diffrn_reflns.pdbx_d_res_high _diffrn_reflns.number _diffrn_reflns.pdbx_percent_possible_obs _diffrn_reflns.pdbx_Rmerge_I_obs _diffrn_reflns.pdbx_chi_squared _diffrn_reflns.pdbx_redundancy _diffrn_reflns.pdbx_rejects _diffrn_reflns.pdbx_number_obs _diffrn_reflns.av_sigmaI_over_netI _diffrn_reflns.pdbx_Rsym_value _diffrn_reflns.pdbx_observed_criterion 1 50.00 1.75 21529 100.000 0.118 1.427 14.200 ? ? ? ? ? 2 50.00 1.75 21553 100.000 0.109 1.051 14.200 ? ? ? ? ? 3 50.00 1.75 21554 100.000 0.108 1.026 14.300 ? ? ? ? ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.percent_possible_obs _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.Rsym_value 1 50.00 4.32 99.900 0.105 2.204 12.900 ? ? ? 1 4.32 3.43 100.000 0.103 2.053 14.000 ? ? ? 1 3.43 2.99 100.000 0.108 2.189 14.100 ? ? ? 1 2.99 2.72 100.000 0.119 2.224 14.300 ? ? ? 1 2.72 2.52 100.000 0.121 1.782 14.400 ? ? ? 1 2.52 2.38 100.000 0.129 1.568 14.400 ? ? ? 1 2.38 2.26 100.000 0.137 1.591 14.500 ? ? ? 1 2.26 2.16 100.000 0.136 1.582 14.500 ? ? ? 1 2.16 2.07 100.000 0.143 1.286 14.400 ? ? ? 1 2.07 2.00 100.000 0.149 1.191 14.400 ? ? ? 1 2.00 1.94 100.000 0.156 1.016 14.500 ? ? ? 1 1.94 1.89 100.000 0.172 0.817 14.500 ? ? ? 1 1.89 1.84 100.000 0.199 0.685 14.500 ? ? ? 1 1.84 1.79 100.000 0.225 0.597 14.400 ? ? ? 1 1.79 1.75 100.000 0.270 0.519 13.800 ? ? ? 2 50.00 4.32 99.900 0.095 1.069 12.900 ? ? ? 2 4.32 3.43 100.000 0.097 1.077 14.000 ? ? ? 2 3.43 2.99 100.000 0.104 0.995 14.200 ? ? ? 2 2.99 2.72 100.000 0.109 1.006 14.400 ? ? ? 2 2.72 2.52 100.000 0.110 1.031 14.400 ? ? ? 2 2.52 2.38 100.000 0.116 1.033 14.400 ? ? ? 2 2.38 2.26 100.000 0.125 1.031 14.500 ? ? ? 2 2.26 2.16 100.000 0.127 1.094 14.500 ? ? ? 2 2.16 2.07 100.000 0.135 1.059 14.500 ? ? ? 2 2.07 2.00 100.000 0.137 1.085 14.500 ? ? ? 2 2.00 1.94 100.000 0.148 1.095 14.500 ? ? ? 2 1.94 1.89 100.000 0.168 1.100 14.400 ? ? ? 2 1.89 1.84 100.000 0.198 1.086 14.500 ? ? ? 2 1.84 1.79 100.000 0.227 1.049 14.300 ? ? ? 2 1.79 1.75 100.000 0.283 0.951 13.400 ? ? ? 3 50.00 4.32 99.900 0.096 1.001 12.900 ? ? ? 3 4.32 3.43 100.000 0.096 0.944 14.000 ? ? ? 3 3.43 2.99 100.000 0.102 0.903 14.200 ? ? ? 3 2.99 2.72 100.000 0.109 1.055 14.400 ? ? ? 3 2.72 2.52 100.000 0.109 1.056 14.400 ? ? ? 3 2.52 2.38 100.000 0.115 1.045 14.400 ? ? ? 3 2.38 2.26 100.000 0.122 0.968 14.500 ? ? ? 3 2.26 2.16 100.000 0.126 1.060 14.500 ? ? ? 3 2.16 2.07 100.000 0.132 1.078 14.500 ? ? ? 3 2.07 2.00 100.000 0.135 1.053 14.500 ? ? ? 3 2.00 1.94 100.000 0.143 1.070 14.500 ? ? ? 3 1.94 1.89 100.000 0.157 1.074 14.500 ? ? ? 3 1.89 1.84 100.000 0.183 1.077 14.500 ? ? ? 3 1.84 1.79 100.000 0.207 1.068 14.500 ? ? ? 3 1.79 1.75 100.000 0.257 0.941 14.300 ? ? ? # loop_ _pdbx_phasing_MAD_set.id _pdbx_phasing_MAD_set.d_res_low _pdbx_phasing_MAD_set.d_res_high _pdbx_phasing_MAD_set.reflns_acentric _pdbx_phasing_MAD_set.reflns_centric _pdbx_phasing_MAD_set.R_cullis_acentric _pdbx_phasing_MAD_set.R_cullis_centric _pdbx_phasing_MAD_set.power_acentric _pdbx_phasing_MAD_set.power_centric ISO_1 33.86 1.75 17977 3206 0.000 0.000 0.000 0.000 ISO_2 33.86 1.75 17977 3206 0.576 0.546 2.070 1.551 ISO_3 33.86 1.75 17977 3206 0.721 0.715 0.981 0.764 ANO_1 33.86 1.75 17977 0 0.567 0.000 1.841 0.000 ANO_2 33.86 1.75 17978 0 0.738 0.000 1.291 0.000 ANO_3 33.86 1.75 17982 0 0.795 0.000 1.077 0.000 # loop_ _pdbx_phasing_MAD_set_shell.id _pdbx_phasing_MAD_set_shell.d_res_low _pdbx_phasing_MAD_set_shell.d_res_high _pdbx_phasing_MAD_set_shell.reflns_acentric _pdbx_phasing_MAD_set_shell.reflns_centric _pdbx_phasing_MAD_set_shell.R_cullis_acentric _pdbx_phasing_MAD_set_shell.R_cullis_centric _pdbx_phasing_MAD_set_shell.power_acentric _pdbx_phasing_MAD_set_shell.power_centric ISO_1 33.86 7.63 154 153 0.000 0.000 0.000 0.000 ISO_1 7.63 5.47 318 168 0.000 0.000 0.000 0.000 ISO_1 5.47 4.48 440 167 0.000 0.000 0.000 0.000 ISO_1 4.48 3.89 535 166 0.000 0.000 0.000 0.000 ISO_1 3.89 3.49 618 169 0.000 0.000 0.000 0.000 ISO_1 3.49 3.19 684 168 0.000 0.000 0.000 0.000 ISO_1 3.19 2.95 762 163 0.000 0.000 0.000 0.000 ISO_1 2.95 2.76 814 160 0.000 0.000 0.000 0.000 ISO_1 2.76 2.60 871 155 0.000 0.000 0.000 0.000 ISO_1 2.60 2.47 932 146 0.000 0.000 0.000 0.000 ISO_1 2.47 2.36 988 149 0.000 0.000 0.000 0.000 ISO_1 2.36 2.26 1024 139 0.000 0.000 0.000 0.000 ISO_1 2.26 2.17 1089 152 0.000 0.000 0.000 0.000 ISO_1 2.17 2.09 1133 161 0.000 0.000 0.000 0.000 ISO_1 2.09 2.02 1169 164 0.000 0.000 0.000 0.000 ISO_1 2.02 1.96 1201 141 0.000 0.000 0.000 0.000 ISO_1 1.96 1.90 1263 179 0.000 0.000 0.000 0.000 ISO_1 1.90 1.84 1302 167 0.000 0.000 0.000 0.000 ISO_1 1.84 1.80 1318 169 0.000 0.000 0.000 0.000 ISO_1 1.80 1.75 1362 170 0.000 0.000 0.000 0.000 ANO_1 33.86 7.63 154 0 0.484 0.000 1.901 0.000 ANO_1 7.63 5.47 318 0 0.485 0.000 2.238 0.000 ANO_1 5.47 4.48 440 0 0.505 0.000 2.080 0.000 ANO_1 4.48 3.89 535 0 0.580 0.000 1.681 0.000 ANO_1 3.89 3.49 618 0 0.565 0.000 1.811 0.000 ANO_1 3.49 3.19 684 0 0.517 0.000 2.017 0.000 ANO_1 3.19 2.95 762 0 0.510 0.000 2.187 0.000 ANO_1 2.95 2.76 814 0 0.483 0.000 2.259 0.000 ANO_1 2.76 2.60 871 0 0.499 0.000 2.319 0.000 ANO_1 2.60 2.47 932 0 0.506 0.000 2.188 0.000 ANO_1 2.47 2.36 988 0 0.518 0.000 2.068 0.000 ANO_1 2.36 2.26 1024 0 0.528 0.000 1.983 0.000 ANO_1 2.26 2.17 1089 0 0.563 0.000 1.867 0.000 ANO_1 2.17 2.09 1133 0 0.599 0.000 1.812 0.000 ANO_1 2.09 2.02 1169 0 0.623 0.000 1.568 0.000 ANO_1 2.02 1.96 1201 0 0.648 0.000 1.602 0.000 ANO_1 1.96 1.90 1263 0 0.698 0.000 1.451 0.000 ANO_1 1.90 1.84 1302 0 0.746 0.000 1.278 0.000 ANO_1 1.84 1.80 1318 0 0.785 0.000 1.182 0.000 ANO_1 1.80 1.75 1362 0 0.868 0.000 1.073 0.000 ISO_2 33.86 7.63 154 153 0.583 0.467 2.208 1.741 ISO_2 7.63 5.47 318 168 0.468 0.515 2.963 1.803 ISO_2 5.47 4.48 440 167 0.555 0.521 2.157 1.496 ISO_2 4.48 3.89 535 166 0.616 0.589 1.687 1.575 ISO_2 3.89 3.49 618 169 0.628 0.535 1.760 1.475 ISO_2 3.49 3.19 684 168 0.615 0.571 1.872 1.512 ISO_2 3.19 2.95 762 163 0.574 0.526 2.231 1.978 ISO_2 2.95 2.76 814 160 0.537 0.531 2.494 1.792 ISO_2 2.76 2.60 871 155 0.511 0.507 2.586 1.511 ISO_2 2.60 2.47 932 146 0.520 0.594 2.588 1.610 ISO_2 2.47 2.36 988 149 0.538 0.520 2.595 1.775 ISO_2 2.36 2.26 1024 139 0.544 0.549 2.367 1.594 ISO_2 2.26 2.17 1089 152 0.560 0.571 2.232 1.630 ISO_2 2.17 2.09 1133 161 0.564 0.609 2.167 1.442 ISO_2 2.09 2.02 1169 164 0.573 0.570 2.080 1.343 ISO_2 2.02 1.96 1201 141 0.562 0.555 1.977 1.314 ISO_2 1.96 1.90 1263 179 0.589 0.735 1.870 1.147 ISO_2 1.90 1.84 1302 167 0.589 0.668 1.686 1.072 ISO_2 1.84 1.80 1318 169 0.618 0.710 1.487 0.905 ISO_2 1.80 1.75 1362 170 0.672 0.698 1.304 0.843 ANO_2 33.86 7.63 154 0 0.676 0.000 1.271 0.000 ANO_2 7.63 5.47 318 0 0.629 0.000 1.673 0.000 ANO_2 5.47 4.48 440 0 0.729 0.000 1.319 0.000 ANO_2 4.48 3.89 535 0 0.771 0.000 1.090 0.000 ANO_2 3.89 3.49 618 0 0.738 0.000 1.199 0.000 ANO_2 3.49 3.19 684 0 0.759 0.000 1.267 0.000 ANO_2 3.19 2.95 762 0 0.730 0.000 1.439 0.000 ANO_2 2.95 2.76 814 0 0.685 0.000 1.525 0.000 ANO_2 2.76 2.60 871 0 0.685 0.000 1.604 0.000 ANO_2 2.60 2.47 932 0 0.694 0.000 1.532 0.000 ANO_2 2.47 2.36 988 0 0.681 0.000 1.558 0.000 ANO_2 2.36 2.26 1024 0 0.703 0.000 1.458 0.000 ANO_2 2.26 2.17 1089 0 0.727 0.000 1.289 0.000 ANO_2 2.17 2.09 1133 0 0.735 0.000 1.276 0.000 ANO_2 2.09 2.02 1169 0 0.760 0.000 1.251 0.000 ANO_2 2.02 1.96 1201 0 0.765 0.000 1.182 0.000 ANO_2 1.96 1.90 1263 0 0.780 0.000 1.099 0.000 ANO_2 1.90 1.84 1302 0 0.825 0.000 1.033 0.000 ANO_2 1.84 1.80 1318 0 0.847 0.000 0.956 0.000 ANO_2 1.80 1.75 1363 0 0.893 0.000 0.824 0.000 ISO_3 33.86 7.63 154 153 0.758 0.700 1.073 0.980 ISO_3 7.63 5.47 318 168 0.694 0.767 1.343 0.911 ISO_3 5.47 4.48 440 167 0.722 0.690 1.083 0.846 ISO_3 4.48 3.89 535 166 0.712 0.687 0.834 0.733 ISO_3 3.89 3.49 618 169 0.720 0.676 0.912 0.711 ISO_3 3.49 3.19 684 168 0.711 0.693 0.925 0.736 ISO_3 3.19 2.95 762 163 0.720 0.705 1.009 0.859 ISO_3 2.95 2.76 814 160 0.725 0.684 1.129 0.789 ISO_3 2.76 2.60 871 155 0.702 0.682 1.204 0.746 ISO_3 2.60 2.47 932 146 0.701 0.675 1.140 0.727 ISO_3 2.47 2.36 988 149 0.700 0.684 1.117 0.715 ISO_3 2.36 2.26 1024 139 0.704 0.766 1.093 0.713 ISO_3 2.26 2.17 1089 152 0.707 0.732 0.997 0.776 ISO_3 2.17 2.09 1133 161 0.706 0.764 0.963 0.591 ISO_3 2.09 2.02 1169 164 0.716 0.757 0.942 0.680 ISO_3 2.02 1.96 1201 141 0.722 0.747 0.921 0.587 ISO_3 1.96 1.90 1263 179 0.728 0.855 0.856 0.564 ISO_3 1.90 1.84 1302 167 0.751 0.854 0.782 0.528 ISO_3 1.84 1.80 1318 169 0.766 0.789 0.687 0.422 ISO_3 1.80 1.75 1362 170 0.803 0.847 0.617 0.426 ANO_3 33.86 7.63 154 0 0.743 0.000 1.215 0.000 ANO_3 7.63 5.47 318 0 0.652 0.000 1.568 0.000 ANO_3 5.47 4.48 440 0 0.767 0.000 1.136 0.000 ANO_3 4.48 3.89 535 0 0.835 0.000 0.978 0.000 ANO_3 3.89 3.49 618 0 0.834 0.000 0.960 0.000 ANO_3 3.49 3.19 684 0 0.784 0.000 1.107 0.000 ANO_3 3.19 2.95 762 0 0.771 0.000 1.189 0.000 ANO_3 2.95 2.76 814 0 0.740 0.000 1.328 0.000 ANO_3 2.76 2.60 871 0 0.722 0.000 1.393 0.000 ANO_3 2.60 2.47 932 0 0.739 0.000 1.250 0.000 ANO_3 2.47 2.36 988 0 0.740 0.000 1.277 0.000 ANO_3 2.36 2.26 1024 0 0.750 0.000 1.233 0.000 ANO_3 2.26 2.17 1089 0 0.794 0.000 1.067 0.000 ANO_3 2.17 2.09 1133 0 0.803 0.000 1.018 0.000 ANO_3 2.09 2.02 1169 0 0.826 0.000 0.947 0.000 ANO_3 2.02 1.96 1201 0 0.830 0.000 0.945 0.000 ANO_3 1.96 1.90 1263 0 0.843 0.000 0.867 0.000 ANO_3 1.90 1.84 1302 0 0.877 0.000 0.793 0.000 ANO_3 1.84 1.80 1318 0 0.897 0.000 0.688 0.000 ANO_3 1.80 1.75 1367 0 0.927 0.000 0.631 0.000 # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.Cartn_x _pdbx_phasing_MAD_set_site.Cartn_y _pdbx_phasing_MAD_set_site.Cartn_z _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.b_iso 1 SE -2.115 -11.338 -16.820 1.71 15.89 2 SE -3.770 -15.079 -53.632 1.47 19.59 3 SE -4.463 -45.126 -78.563 0.95 29.90 # _pdbx_phasing_dm.entry_id 2ATF _pdbx_phasing_dm.method 'Solvent flattening and Histogram matching' _pdbx_phasing_dm.reflns 21466 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 6.470 100.000 47.100 ? ? ? 0.913 ? ? 503 5.050 6.470 35.600 ? ? ? 0.955 ? ? 510 4.390 5.050 40.200 ? ? ? 0.962 ? ? 508 3.960 4.390 39.800 ? ? ? 0.959 ? ? 510 3.660 3.960 42.500 ? ? ? 0.959 ? ? 520 3.410 3.660 42.900 ? ? ? 0.959 ? ? 549 3.210 3.410 39.700 ? ? ? 0.955 ? ? 590 3.040 3.210 43.400 ? ? ? 0.940 ? ? 639 2.900 3.040 42.000 ? ? ? 0.940 ? ? 648 2.770 2.900 43.000 ? ? ? 0.932 ? ? 683 2.660 2.770 38.900 ? ? ? 0.933 ? ? 722 2.560 2.660 40.200 ? ? ? 0.935 ? ? 730 2.470 2.560 39.200 ? ? ? 0.924 ? ? 754 2.390 2.470 43.000 ? ? ? 0.927 ? ? 781 2.320 2.390 42.100 ? ? ? 0.918 ? ? 819 2.250 2.320 39.900 ? ? ? 0.922 ? ? 831 2.190 2.250 39.700 ? ? ? 0.916 ? ? 840 2.140 2.190 41.100 ? ? ? 0.902 ? ? 878 2.080 2.140 44.000 ? ? ? 0.904 ? ? 912 2.030 2.080 42.700 ? ? ? 0.894 ? ? 899 1.990 2.030 42.000 ? ? ? 0.899 ? ? 933 1.950 1.990 45.900 ? ? ? 0.891 ? ? 969 1.910 1.950 46.800 ? ? ? 0.878 ? ? 964 1.870 1.910 47.800 ? ? ? 0.865 ? ? 999 1.830 1.870 53.100 ? ? ? 0.861 ? ? 1020 1.800 1.830 53.600 ? ? ? 0.824 ? ? 1014 1.750 1.800 59.300 ? ? ? 0.775 ? ? 1741 # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SHARP . ? program 'de La Fortelle' sharp-develop@globalphasing.com phasing http://babinet.globalphasing.com/sharp/ ? ? 3 DM 5.0 ? program 'K. Cowtan' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran ? 4 REFMAC refmac_5.2.0005 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 5 PDB_EXTRACT 1.700 'May. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 # _pdbx_entry_details.entry_id 2ATF _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;The metal ion in this structure is currently modeled as Ni2+.ICP analysis indicates that there is a mixture of metals in the protein sample, with Ni dominant, Zn next most abundant, and some Fe. The biologically relevant metal ion is expected to be Fe2+. ; _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 359 ? ? O A HOH 360 ? ? 2.08 2 1 O A HOH 338 ? ? O A HOH 385 ? ? 2.16 3 1 O A HOH 417 ? ? O A HOH 418 ? ? 2.17 4 1 SG A CYS 93 ? ? CE1 A TYR 157 ? ? 2.18 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 128 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 76.02 _pdbx_validate_torsion.psi -9.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A PHE 191 ? A PHE 191 6 1 Y 1 A THR 192 ? A THR 192 7 1 Y 1 A THR 193 ? A THR 193 8 1 Y 1 A SER 194 ? A SER 194 9 1 Y 1 A GLY 195 ? A GLY 195 10 1 Y 1 A SER 196 ? A SER 196 11 1 Y 1 A LEU 197 ? A LEU 197 12 1 Y 1 A GLU 198 ? A GLU 198 13 1 Y 1 A ASN 199 ? A ASN 199 14 1 Y 1 A ASN 200 ? A ASN 200 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 1,2-ETHANEDIOL EDO 4 water HOH #