data_2C5R # _entry.id 2C5R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2C5R pdb_00002c5r 10.2210/pdb2c5r/pdb PDBE EBI-25645 ? ? WWPDB D_1290025645 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1ZAE unspecified 'SOLUTION STRUCTURE OF THE FUNCTIONAL DOMAIN OF PHI29 REPLICATION ORGANIZER P16.7C' PDB 2BNK unspecified 'THE STRUCTURE OF PHAGE PHI29 REPLICATION ORGANIZER PROTEIN P16.7' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2C5R _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-10-31 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Albert, A.' 1 'Jimenez, M.' 2 'Munoz-Espin, D.' 3 'Asensio, J.L.' 4 'Hermoso, J.A.' 5 'Salas, M.' 6 'Meijer, W.J.J.' 7 # _citation.id primary _citation.title 'Structural Basis for Membrane Anchorage of Viral Phi 29 DNA During Replication.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 280 _citation.page_first 42486 _citation.page_last ? _citation.year 2005 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16275651 _citation.pdbx_database_id_DOI 10.1074/JBC.C500429200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Albert, A.' 1 ? primary 'Munoz-Espin, D.' 2 ? primary 'Jimenez, M.' 3 ? primary 'Asensio, J.L.' 4 ? primary 'Hermoso, J.A.' 5 ? primary 'Salas, M.' 6 ? primary 'Meijer, W.J.J.' 7 ? # _cell.entry_id 2C5R _cell.length_a 65.505 _cell.length_b 72.111 _cell.length_c 127.360 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2C5R _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'EARLY PROTEIN P16.7' 7937.970 6 ? ? 'RESIDUES 64-130' 'DSDNA AND SSDNA BINDING PROTEIN' 2 polymer syn "5'-D(*TP*CP*CP*AP*CP*CP*GP*GP)-3'" 2387.581 1 ? ? ? ? 3 polymer syn "5'-D(*CP*CP*GP*GP*TP*GP*GP*AP)-3'" 2467.629 1 ? ? ? ? 4 water nat water 18.015 51 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no KTVNLSACEVAVLDLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQRTYWKLENQKKLYRGSLK KTVNLSACEVAVLDLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQRTYWKLENQKKLYRGSLK A,B,C,D,E,F ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DC)(DA)(DC)(DC)(DG)(DG)' TCCACCGG Y ? 3 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DG)(DT)(DG)(DG)(DA)' CCGGTGGA Z ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 THR n 1 3 VAL n 1 4 ASN n 1 5 LEU n 1 6 SER n 1 7 ALA n 1 8 CYS n 1 9 GLU n 1 10 VAL n 1 11 ALA n 1 12 VAL n 1 13 LEU n 1 14 ASP n 1 15 LEU n 1 16 TYR n 1 17 GLU n 1 18 GLN n 1 19 SER n 1 20 ASN n 1 21 ILE n 1 22 ARG n 1 23 ILE n 1 24 PRO n 1 25 SER n 1 26 ASP n 1 27 ILE n 1 28 ILE n 1 29 GLU n 1 30 ASP n 1 31 LEU n 1 32 VAL n 1 33 ASN n 1 34 GLN n 1 35 ARG n 1 36 LEU n 1 37 GLN n 1 38 SER n 1 39 GLU n 1 40 GLN n 1 41 GLU n 1 42 VAL n 1 43 LEU n 1 44 ASN n 1 45 TYR n 1 46 ILE n 1 47 GLU n 1 48 THR n 1 49 GLN n 1 50 ARG n 1 51 THR n 1 52 TYR n 1 53 TRP n 1 54 LYS n 1 55 LEU n 1 56 GLU n 1 57 ASN n 1 58 GLN n 1 59 LYS n 1 60 LYS n 1 61 LEU n 1 62 TYR n 1 63 ARG n 1 64 GLY n 1 65 SER n 1 66 LEU n 1 67 LYS n 2 1 DT n 2 2 DC n 2 3 DC n 2 4 DA n 2 5 DC n 2 6 DC n 2 7 DG n 2 8 DG n 3 1 DC n 3 2 DC n 3 3 DG n 3 4 DG n 3 5 DT n 3 6 DG n 3 7 DG n 3 8 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'BACILLUS PHAGE PHI29' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10756 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP VG167_BPPH2 1 ? ? P16517 ? 2 PDB 2C5R 2 ? ? 2C5R ? 3 PDB 2C5R 3 ? ? 2C5R ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2C5R A 1 ? 67 ? P16517 64 ? 130 ? 63 129 2 1 2C5R B 1 ? 67 ? P16517 64 ? 130 ? 63 129 3 1 2C5R C 1 ? 67 ? P16517 64 ? 130 ? 63 129 4 1 2C5R D 1 ? 67 ? P16517 64 ? 130 ? 63 129 5 1 2C5R E 1 ? 67 ? P16517 64 ? 130 ? 63 129 6 1 2C5R F 1 ? 67 ? P16517 64 ? 130 ? 63 129 7 2 2C5R Y 1 ? 8 ? 2C5R 9 ? 16 ? 9 16 8 3 2C5R Z 1 ? 8 ? 2C5R 1 ? 8 ? 1 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2C5R _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.04 _exptl_crystal.density_percent_sol 59.20 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 173.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM16' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM16 _diffrn_source.pdbx_wavelength 0.91 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2C5R _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.900 _reflns.number_obs 12368 _reflns.number_all ? _reflns.percent_possible_obs 96.2 _reflns.pdbx_Rmerge_I_obs 0.06000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.900 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.06 _reflns_shell.percent_possible_all 90.7 _reflns_shell.Rmerge_I_obs 0.36000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.100 _reflns_shell.pdbx_redundancy 4.10 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2C5R _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 12386 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 95.8 _refine.ls_R_factor_obs 0.254 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.251 _refine.ls_R_factor_R_free 0.292 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.200 _refine.ls_number_reflns_R_free 960 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.930 _refine.correlation_coeff_Fo_to_Fc_free 0.906 _refine.B_iso_mean 51.71 _refine.aniso_B[1][1] -2.67000 _refine.aniso_B[2][2] -0.14000 _refine.aniso_B[3][3] 2.81000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2BNK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.470 _refine.overall_SU_ML 0.418 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 22.380 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3156 _refine_hist.pdbx_number_atoms_nucleic_acid 328 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 51 _refine_hist.number_atoms_total 3535 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.028 0.021 ? 3558 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.218 2.087 ? 4874 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.900 5.000 ? 372 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.146 0.200 ? 540 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 2580 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.279 0.200 ? 1598 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.252 0.200 ? 117 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.251 0.200 ? 62 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.477 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.397 1.500 ? 1890 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.707 2.000 ? 3066 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.128 3.000 ? 1668 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.762 4.500 ? 1808 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 459 0.19 5.00 'loose positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 459 0.21 5.00 'loose positional' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 3 C 459 0.19 5.00 'loose positional' 1 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 4 D 459 0.22 5.00 'loose positional' 1 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 5 E 459 0.21 5.00 'loose positional' 1 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 6 F 459 0.35 5.00 'loose positional' 1 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 459 1.17 10.00 'loose thermal' 1 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 459 1.20 10.00 'loose thermal' 1 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? 3 C 459 1.02 10.00 'loose thermal' 1 9 'X-RAY DIFFRACTION' ? ? ? ? ? ? 4 D 459 1.02 10.00 'loose thermal' 1 10 'X-RAY DIFFRACTION' ? ? ? ? ? ? 5 E 459 1.18 10.00 'loose thermal' 1 11 'X-RAY DIFFRACTION' ? ? ? ? ? ? 6 F 459 1.25 10.00 'loose thermal' 1 12 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.90 _refine_ls_shell.d_res_low 2.98 _refine_ls_shell.number_reflns_R_work 864 _refine_ls_shell.R_factor_R_work 0.3150 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3940 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? -0.998550 -0.022810 0.048820 -0.028070 -0.553300 -0.832510 0.046010 -0.832670 0.551860 39.73845 27.39048 13.62338 2 given ? -0.998260 -0.026380 -0.052820 0.023690 -0.998420 0.050920 -0.054080 0.049580 0.997300 34.55003 32.33890 -0.19360 3 given ? 0.993490 0.081240 -0.079820 0.033380 0.462400 0.886040 0.108890 -0.882940 0.456680 -6.12134 6.05816 13.32267 4 given ? -0.985940 -0.132660 0.101630 -0.158310 0.546680 -0.822240 0.053520 -0.826770 -0.559990 45.94772 12.68644 16.75061 5 given ? 0.995660 0.047720 0.079880 0.050320 0.445920 -0.893660 -0.078270 0.893800 0.441580 4.79002 10.35376 -11.41956 # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 3 C 1 4 D 1 5 E 1 6 F 1 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 A 8 A 62 1 6 ? ? ? ? ? ? ? ? 1 ? ? ? 2 B 8 B 62 1 6 ? ? ? ? ? ? ? ? 1 ? ? ? 3 C 8 C 62 1 6 ? ? ? ? ? ? ? ? 1 ? ? ? 4 D 8 D 62 1 6 ? ? ? ? ? ? ? ? 1 ? ? ? 5 E 8 E 62 1 6 ? ? ? ? ? ? ? ? 1 ? ? ? 6 F 8 F 62 1 6 ? ? ? ? ? ? ? ? 1 ? ? ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2C5R _struct.title 'The structure of phage phi29 replication organizer protein p16.7 in complex with double stranded DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2C5R _struct_keywords.pdbx_keywords 'DNA-BINDING PROTEIN/DNA' _struct_keywords.text 'DNA-BINDING PROTEIN-DNA COMPLEX, DNA-BINDING PROTEIN, COMPLEX (DNA-BINDING PROTEIN-DNA)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? SER A 19 ? SER A 68 SER A 81 1 ? 14 HELX_P HELX_P2 2 PRO A 24 ? ASN A 33 ? PRO A 86 ASN A 95 1 ? 10 HELX_P HELX_P3 3 SER A 38 ? ASN A 57 ? SER A 100 ASN A 119 1 ? 20 HELX_P HELX_P4 4 SER B 6 ? SER B 19 ? SER B 68 SER B 81 1 ? 14 HELX_P HELX_P5 5 PRO B 24 ? ASN B 33 ? PRO B 86 ASN B 95 1 ? 10 HELX_P HELX_P6 6 SER B 38 ? LYS B 59 ? SER B 100 LYS B 121 1 ? 22 HELX_P HELX_P7 7 SER C 6 ? SER C 19 ? SER C 68 SER C 81 1 ? 14 HELX_P HELX_P8 8 PRO C 24 ? ASN C 33 ? PRO C 86 ASN C 95 1 ? 10 HELX_P HELX_P9 9 SER C 38 ? LYS C 59 ? SER C 100 LYS C 121 1 ? 22 HELX_P HELX_P10 10 SER D 6 ? SER D 19 ? SER D 68 SER D 81 1 ? 14 HELX_P HELX_P11 11 PRO D 24 ? ASN D 33 ? PRO D 86 ASN D 95 1 ? 10 HELX_P HELX_P12 12 SER D 38 ? ASN D 57 ? SER D 100 ASN D 119 1 ? 20 HELX_P HELX_P13 13 SER E 6 ? SER E 19 ? SER E 68 SER E 81 1 ? 14 HELX_P HELX_P14 14 PRO E 24 ? ASN E 33 ? PRO E 86 ASN E 95 1 ? 10 HELX_P HELX_P15 15 SER E 38 ? LYS E 59 ? SER E 100 LYS E 121 1 ? 22 HELX_P HELX_P16 16 SER F 6 ? SER F 19 ? SER F 68 SER F 81 1 ? 14 HELX_P HELX_P17 17 PRO F 24 ? ASN F 33 ? PRO F 86 ASN F 95 1 ? 10 HELX_P HELX_P18 18 SER F 38 ? LYS F 59 ? SER F 100 LYS F 121 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? G DT 1 N3 ? ? ? 1_555 H DA 8 N1 ? ? Y DT 9 Z DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? G DT 1 O4 ? ? ? 1_555 H DA 8 N6 ? ? Y DT 9 Z DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? G DC 2 N3 ? ? ? 1_555 H DG 7 N1 ? ? Y DC 10 Z DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? G DC 2 N4 ? ? ? 1_555 H DG 7 O6 ? ? Y DC 10 Z DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? G DC 2 O2 ? ? ? 1_555 H DG 7 N2 ? ? Y DC 10 Z DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? G DC 3 N3 ? ? ? 1_555 H DG 6 N1 ? ? Y DC 11 Z DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? G DC 3 N4 ? ? ? 1_555 H DG 6 O6 ? ? Y DC 11 Z DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? G DC 3 O2 ? ? ? 1_555 H DG 6 N2 ? ? Y DC 11 Z DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? G DA 4 N1 ? ? ? 1_555 H DT 5 N3 ? ? Y DA 12 Z DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? G DA 4 N6 ? ? ? 1_555 H DT 5 O4 ? ? Y DA 12 Z DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? G DC 5 N3 ? ? ? 1_555 H DG 4 N1 ? ? Y DC 13 Z DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? G DC 5 N4 ? ? ? 1_555 H DG 4 O6 ? ? Y DC 13 Z DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? G DC 5 O2 ? ? ? 1_555 H DG 4 N2 ? ? Y DC 13 Z DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? G DC 6 N3 ? ? ? 1_555 H DG 3 N1 ? ? Y DC 14 Z DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? G DC 6 N4 ? ? ? 1_555 H DG 3 O6 ? ? Y DC 14 Z DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? G DC 6 O2 ? ? ? 1_555 H DG 3 N2 ? ? Y DC 14 Z DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? G DG 7 N1 ? ? ? 1_555 H DC 2 N3 ? ? Y DG 15 Z DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? G DG 7 N2 ? ? ? 1_555 H DC 2 O2 ? ? Y DG 15 Z DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? G DG 7 O6 ? ? ? 1_555 H DC 2 N4 ? ? Y DG 15 Z DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? G DG 8 N1 ? ? ? 1_555 H DC 1 N3 ? ? Y DG 16 Z DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? G DG 8 N2 ? ? ? 1_555 H DC 1 O2 ? ? Y DG 16 Z DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? G DG 8 O6 ? ? ? 1_555 H DC 1 N4 ? ? Y DG 16 Z DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2C5R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2C5R _atom_sites.fract_transf_matrix[1][1] 0.015266 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013868 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007852 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 63 ? ? ? A . n A 1 2 THR 2 64 ? ? ? A . n A 1 3 VAL 3 65 ? ? ? A . n A 1 4 ASN 4 66 66 ASN ASN A . n A 1 5 LEU 5 67 67 LEU LEU A . n A 1 6 SER 6 68 68 SER SER A . n A 1 7 ALA 7 69 69 ALA ALA A . n A 1 8 CYS 8 70 70 CYS CYS A . n A 1 9 GLU 9 71 71 GLU GLU A . n A 1 10 VAL 10 72 72 VAL VAL A . n A 1 11 ALA 11 73 73 ALA ALA A . n A 1 12 VAL 12 74 74 VAL VAL A . n A 1 13 LEU 13 75 75 LEU LEU A . n A 1 14 ASP 14 76 76 ASP ASP A . n A 1 15 LEU 15 77 77 LEU LEU A . n A 1 16 TYR 16 78 78 TYR TYR A . n A 1 17 GLU 17 79 79 GLU GLU A . n A 1 18 GLN 18 80 80 GLN GLN A . n A 1 19 SER 19 81 81 SER SER A . n A 1 20 ASN 20 82 82 ASN ASN A . n A 1 21 ILE 21 83 83 ILE ILE A . n A 1 22 ARG 22 84 84 ARG ARG A . n A 1 23 ILE 23 85 85 ILE ILE A . n A 1 24 PRO 24 86 86 PRO PRO A . n A 1 25 SER 25 87 87 SER SER A . n A 1 26 ASP 26 88 88 ASP ASP A . n A 1 27 ILE 27 89 89 ILE ILE A . n A 1 28 ILE 28 90 90 ILE ILE A . n A 1 29 GLU 29 91 91 GLU GLU A . n A 1 30 ASP 30 92 92 ASP ASP A . n A 1 31 LEU 31 93 93 LEU LEU A . n A 1 32 VAL 32 94 94 VAL VAL A . n A 1 33 ASN 33 95 95 ASN ASN A . n A 1 34 GLN 34 96 96 GLN GLN A . n A 1 35 ARG 35 97 97 ARG ARG A . n A 1 36 LEU 36 98 98 LEU LEU A . n A 1 37 GLN 37 99 99 GLN GLN A . n A 1 38 SER 38 100 100 SER SER A . n A 1 39 GLU 39 101 101 GLU GLU A . n A 1 40 GLN 40 102 102 GLN GLN A . n A 1 41 GLU 41 103 103 GLU GLU A . n A 1 42 VAL 42 104 104 VAL VAL A . n A 1 43 LEU 43 105 105 LEU LEU A . n A 1 44 ASN 44 106 106 ASN ASN A . n A 1 45 TYR 45 107 107 TYR TYR A . n A 1 46 ILE 46 108 108 ILE ILE A . n A 1 47 GLU 47 109 109 GLU GLU A . n A 1 48 THR 48 110 110 THR THR A . n A 1 49 GLN 49 111 111 GLN GLN A . n A 1 50 ARG 50 112 112 ARG ARG A . n A 1 51 THR 51 113 113 THR THR A . n A 1 52 TYR 52 114 114 TYR TYR A . n A 1 53 TRP 53 115 115 TRP TRP A . n A 1 54 LYS 54 116 116 LYS LYS A . n A 1 55 LEU 55 117 117 LEU LEU A . n A 1 56 GLU 56 118 118 GLU GLU A . n A 1 57 ASN 57 119 119 ASN ASN A . n A 1 58 GLN 58 120 120 GLN GLN A . n A 1 59 LYS 59 121 121 LYS LYS A . n A 1 60 LYS 60 122 122 LYS LYS A . n A 1 61 LEU 61 123 123 LEU LEU A . n A 1 62 TYR 62 124 124 TYR TYR A . n A 1 63 ARG 63 125 125 ARG ARG A . n A 1 64 GLY 64 126 126 GLY GLY A . n A 1 65 SER 65 127 127 SER SER A . n A 1 66 LEU 66 128 128 LEU LEU A . n A 1 67 LYS 67 129 129 LYS LYS A . n B 1 1 LYS 1 63 ? ? ? B . n B 1 2 THR 2 64 ? ? ? B . n B 1 3 VAL 3 65 ? ? ? B . n B 1 4 ASN 4 66 66 ASN ASN B . n B 1 5 LEU 5 67 67 LEU LEU B . n B 1 6 SER 6 68 68 SER SER B . n B 1 7 ALA 7 69 69 ALA ALA B . n B 1 8 CYS 8 70 70 CYS CYS B . n B 1 9 GLU 9 71 71 GLU GLU B . n B 1 10 VAL 10 72 72 VAL VAL B . n B 1 11 ALA 11 73 73 ALA ALA B . n B 1 12 VAL 12 74 74 VAL VAL B . n B 1 13 LEU 13 75 75 LEU LEU B . n B 1 14 ASP 14 76 76 ASP ASP B . n B 1 15 LEU 15 77 77 LEU LEU B . n B 1 16 TYR 16 78 78 TYR TYR B . n B 1 17 GLU 17 79 79 GLU GLU B . n B 1 18 GLN 18 80 80 GLN GLN B . n B 1 19 SER 19 81 81 SER SER B . n B 1 20 ASN 20 82 82 ASN ASN B . n B 1 21 ILE 21 83 83 ILE ILE B . n B 1 22 ARG 22 84 84 ARG ARG B . n B 1 23 ILE 23 85 85 ILE ILE B . n B 1 24 PRO 24 86 86 PRO PRO B . n B 1 25 SER 25 87 87 SER SER B . n B 1 26 ASP 26 88 88 ASP ASP B . n B 1 27 ILE 27 89 89 ILE ILE B . n B 1 28 ILE 28 90 90 ILE ILE B . n B 1 29 GLU 29 91 91 GLU GLU B . n B 1 30 ASP 30 92 92 ASP ASP B . n B 1 31 LEU 31 93 93 LEU LEU B . n B 1 32 VAL 32 94 94 VAL VAL B . n B 1 33 ASN 33 95 95 ASN ASN B . n B 1 34 GLN 34 96 96 GLN GLN B . n B 1 35 ARG 35 97 97 ARG ARG B . n B 1 36 LEU 36 98 98 LEU LEU B . n B 1 37 GLN 37 99 99 GLN GLN B . n B 1 38 SER 38 100 100 SER SER B . n B 1 39 GLU 39 101 101 GLU GLU B . n B 1 40 GLN 40 102 102 GLN GLN B . n B 1 41 GLU 41 103 103 GLU GLU B . n B 1 42 VAL 42 104 104 VAL VAL B . n B 1 43 LEU 43 105 105 LEU LEU B . n B 1 44 ASN 44 106 106 ASN ASN B . n B 1 45 TYR 45 107 107 TYR TYR B . n B 1 46 ILE 46 108 108 ILE ILE B . n B 1 47 GLU 47 109 109 GLU GLU B . n B 1 48 THR 48 110 110 THR THR B . n B 1 49 GLN 49 111 111 GLN GLN B . n B 1 50 ARG 50 112 112 ARG ARG B . n B 1 51 THR 51 113 113 THR THR B . n B 1 52 TYR 52 114 114 TYR TYR B . n B 1 53 TRP 53 115 115 TRP TRP B . n B 1 54 LYS 54 116 116 LYS LYS B . n B 1 55 LEU 55 117 117 LEU LEU B . n B 1 56 GLU 56 118 118 GLU GLU B . n B 1 57 ASN 57 119 119 ASN ASN B . n B 1 58 GLN 58 120 120 GLN GLN B . n B 1 59 LYS 59 121 121 LYS LYS B . n B 1 60 LYS 60 122 122 LYS LYS B . n B 1 61 LEU 61 123 123 LEU LEU B . n B 1 62 TYR 62 124 124 TYR TYR B . n B 1 63 ARG 63 125 125 ARG ARG B . n B 1 64 GLY 64 126 126 GLY GLY B . n B 1 65 SER 65 127 127 SER SER B . n B 1 66 LEU 66 128 128 LEU LEU B . n B 1 67 LYS 67 129 129 LYS LYS B . n C 1 1 LYS 1 63 ? ? ? C . n C 1 2 THR 2 64 ? ? ? C . n C 1 3 VAL 3 65 ? ? ? C . n C 1 4 ASN 4 66 66 ASN ASN C . n C 1 5 LEU 5 67 67 LEU LEU C . n C 1 6 SER 6 68 68 SER SER C . n C 1 7 ALA 7 69 69 ALA ALA C . n C 1 8 CYS 8 70 70 CYS CYS C . n C 1 9 GLU 9 71 71 GLU GLU C . n C 1 10 VAL 10 72 72 VAL VAL C . n C 1 11 ALA 11 73 73 ALA ALA C . n C 1 12 VAL 12 74 74 VAL VAL C . n C 1 13 LEU 13 75 75 LEU LEU C . n C 1 14 ASP 14 76 76 ASP ASP C . n C 1 15 LEU 15 77 77 LEU LEU C . n C 1 16 TYR 16 78 78 TYR TYR C . n C 1 17 GLU 17 79 79 GLU GLU C . n C 1 18 GLN 18 80 80 GLN GLN C . n C 1 19 SER 19 81 81 SER SER C . n C 1 20 ASN 20 82 82 ASN ASN C . n C 1 21 ILE 21 83 83 ILE ILE C . n C 1 22 ARG 22 84 84 ARG ARG C . n C 1 23 ILE 23 85 85 ILE ILE C . n C 1 24 PRO 24 86 86 PRO PRO C . n C 1 25 SER 25 87 87 SER SER C . n C 1 26 ASP 26 88 88 ASP ASP C . n C 1 27 ILE 27 89 89 ILE ILE C . n C 1 28 ILE 28 90 90 ILE ILE C . n C 1 29 GLU 29 91 91 GLU GLU C . n C 1 30 ASP 30 92 92 ASP ASP C . n C 1 31 LEU 31 93 93 LEU LEU C . n C 1 32 VAL 32 94 94 VAL VAL C . n C 1 33 ASN 33 95 95 ASN ASN C . n C 1 34 GLN 34 96 96 GLN GLN C . n C 1 35 ARG 35 97 97 ARG ARG C . n C 1 36 LEU 36 98 98 LEU LEU C . n C 1 37 GLN 37 99 99 GLN GLN C . n C 1 38 SER 38 100 100 SER SER C . n C 1 39 GLU 39 101 101 GLU GLU C . n C 1 40 GLN 40 102 102 GLN GLN C . n C 1 41 GLU 41 103 103 GLU GLU C . n C 1 42 VAL 42 104 104 VAL VAL C . n C 1 43 LEU 43 105 105 LEU LEU C . n C 1 44 ASN 44 106 106 ASN ASN C . n C 1 45 TYR 45 107 107 TYR TYR C . n C 1 46 ILE 46 108 108 ILE ILE C . n C 1 47 GLU 47 109 109 GLU GLU C . n C 1 48 THR 48 110 110 THR THR C . n C 1 49 GLN 49 111 111 GLN GLN C . n C 1 50 ARG 50 112 112 ARG ARG C . n C 1 51 THR 51 113 113 THR THR C . n C 1 52 TYR 52 114 114 TYR TYR C . n C 1 53 TRP 53 115 115 TRP TRP C . n C 1 54 LYS 54 116 116 LYS LYS C . n C 1 55 LEU 55 117 117 LEU LEU C . n C 1 56 GLU 56 118 118 GLU GLU C . n C 1 57 ASN 57 119 119 ASN ASN C . n C 1 58 GLN 58 120 120 GLN GLN C . n C 1 59 LYS 59 121 121 LYS LYS C . n C 1 60 LYS 60 122 122 LYS LYS C . n C 1 61 LEU 61 123 123 LEU LEU C . n C 1 62 TYR 62 124 124 TYR TYR C . n C 1 63 ARG 63 125 125 ARG ARG C . n C 1 64 GLY 64 126 126 GLY GLY C . n C 1 65 SER 65 127 127 SER SER C . n C 1 66 LEU 66 128 128 LEU LEU C . n C 1 67 LYS 67 129 129 LYS LYS C . n D 1 1 LYS 1 63 ? ? ? D . n D 1 2 THR 2 64 ? ? ? D . n D 1 3 VAL 3 65 ? ? ? D . n D 1 4 ASN 4 66 66 ASN ASN D . n D 1 5 LEU 5 67 67 LEU LEU D . n D 1 6 SER 6 68 68 SER SER D . n D 1 7 ALA 7 69 69 ALA ALA D . n D 1 8 CYS 8 70 70 CYS CYS D . n D 1 9 GLU 9 71 71 GLU GLU D . n D 1 10 VAL 10 72 72 VAL VAL D . n D 1 11 ALA 11 73 73 ALA ALA D . n D 1 12 VAL 12 74 74 VAL VAL D . n D 1 13 LEU 13 75 75 LEU LEU D . n D 1 14 ASP 14 76 76 ASP ASP D . n D 1 15 LEU 15 77 77 LEU LEU D . n D 1 16 TYR 16 78 78 TYR TYR D . n D 1 17 GLU 17 79 79 GLU GLU D . n D 1 18 GLN 18 80 80 GLN GLN D . n D 1 19 SER 19 81 81 SER SER D . n D 1 20 ASN 20 82 82 ASN ASN D . n D 1 21 ILE 21 83 83 ILE ILE D . n D 1 22 ARG 22 84 84 ARG ARG D . n D 1 23 ILE 23 85 85 ILE ILE D . n D 1 24 PRO 24 86 86 PRO PRO D . n D 1 25 SER 25 87 87 SER SER D . n D 1 26 ASP 26 88 88 ASP ASP D . n D 1 27 ILE 27 89 89 ILE ILE D . n D 1 28 ILE 28 90 90 ILE ILE D . n D 1 29 GLU 29 91 91 GLU GLU D . n D 1 30 ASP 30 92 92 ASP ASP D . n D 1 31 LEU 31 93 93 LEU LEU D . n D 1 32 VAL 32 94 94 VAL VAL D . n D 1 33 ASN 33 95 95 ASN ASN D . n D 1 34 GLN 34 96 96 GLN GLN D . n D 1 35 ARG 35 97 97 ARG ARG D . n D 1 36 LEU 36 98 98 LEU LEU D . n D 1 37 GLN 37 99 99 GLN GLN D . n D 1 38 SER 38 100 100 SER SER D . n D 1 39 GLU 39 101 101 GLU GLU D . n D 1 40 GLN 40 102 102 GLN GLN D . n D 1 41 GLU 41 103 103 GLU GLU D . n D 1 42 VAL 42 104 104 VAL VAL D . n D 1 43 LEU 43 105 105 LEU LEU D . n D 1 44 ASN 44 106 106 ASN ASN D . n D 1 45 TYR 45 107 107 TYR TYR D . n D 1 46 ILE 46 108 108 ILE ILE D . n D 1 47 GLU 47 109 109 GLU GLU D . n D 1 48 THR 48 110 110 THR THR D . n D 1 49 GLN 49 111 111 GLN GLN D . n D 1 50 ARG 50 112 112 ARG ARG D . n D 1 51 THR 51 113 113 THR THR D . n D 1 52 TYR 52 114 114 TYR TYR D . n D 1 53 TRP 53 115 115 TRP TRP D . n D 1 54 LYS 54 116 116 LYS LYS D . n D 1 55 LEU 55 117 117 LEU LEU D . n D 1 56 GLU 56 118 118 GLU GLU D . n D 1 57 ASN 57 119 119 ASN ASN D . n D 1 58 GLN 58 120 120 GLN GLN D . n D 1 59 LYS 59 121 121 LYS LYS D . n D 1 60 LYS 60 122 122 LYS LYS D . n D 1 61 LEU 61 123 123 LEU LEU D . n D 1 62 TYR 62 124 124 TYR TYR D . n D 1 63 ARG 63 125 125 ARG ARG D . n D 1 64 GLY 64 126 126 GLY GLY D . n D 1 65 SER 65 127 127 SER SER D . n D 1 66 LEU 66 128 128 LEU LEU D . n D 1 67 LYS 67 129 129 LYS LYS D . n E 1 1 LYS 1 63 ? ? ? E . n E 1 2 THR 2 64 ? ? ? E . n E 1 3 VAL 3 65 ? ? ? E . n E 1 4 ASN 4 66 66 ASN ASN E . n E 1 5 LEU 5 67 67 LEU LEU E . n E 1 6 SER 6 68 68 SER SER E . n E 1 7 ALA 7 69 69 ALA ALA E . n E 1 8 CYS 8 70 70 CYS CYS E . n E 1 9 GLU 9 71 71 GLU GLU E . n E 1 10 VAL 10 72 72 VAL VAL E . n E 1 11 ALA 11 73 73 ALA ALA E . n E 1 12 VAL 12 74 74 VAL VAL E . n E 1 13 LEU 13 75 75 LEU LEU E . n E 1 14 ASP 14 76 76 ASP ASP E . n E 1 15 LEU 15 77 77 LEU LEU E . n E 1 16 TYR 16 78 78 TYR TYR E . n E 1 17 GLU 17 79 79 GLU GLU E . n E 1 18 GLN 18 80 80 GLN GLN E . n E 1 19 SER 19 81 81 SER SER E . n E 1 20 ASN 20 82 82 ASN ASN E . n E 1 21 ILE 21 83 83 ILE ILE E . n E 1 22 ARG 22 84 84 ARG ARG E . n E 1 23 ILE 23 85 85 ILE ILE E . n E 1 24 PRO 24 86 86 PRO PRO E . n E 1 25 SER 25 87 87 SER SER E . n E 1 26 ASP 26 88 88 ASP ASP E . n E 1 27 ILE 27 89 89 ILE ILE E . n E 1 28 ILE 28 90 90 ILE ILE E . n E 1 29 GLU 29 91 91 GLU GLU E . n E 1 30 ASP 30 92 92 ASP ASP E . n E 1 31 LEU 31 93 93 LEU LEU E . n E 1 32 VAL 32 94 94 VAL VAL E . n E 1 33 ASN 33 95 95 ASN ASN E . n E 1 34 GLN 34 96 96 GLN GLN E . n E 1 35 ARG 35 97 97 ARG ARG E . n E 1 36 LEU 36 98 98 LEU LEU E . n E 1 37 GLN 37 99 99 GLN GLN E . n E 1 38 SER 38 100 100 SER SER E . n E 1 39 GLU 39 101 101 GLU GLU E . n E 1 40 GLN 40 102 102 GLN GLN E . n E 1 41 GLU 41 103 103 GLU GLU E . n E 1 42 VAL 42 104 104 VAL VAL E . n E 1 43 LEU 43 105 105 LEU LEU E . n E 1 44 ASN 44 106 106 ASN ASN E . n E 1 45 TYR 45 107 107 TYR TYR E . n E 1 46 ILE 46 108 108 ILE ILE E . n E 1 47 GLU 47 109 109 GLU GLU E . n E 1 48 THR 48 110 110 THR THR E . n E 1 49 GLN 49 111 111 GLN GLN E . n E 1 50 ARG 50 112 112 ARG ARG E . n E 1 51 THR 51 113 113 THR THR E . n E 1 52 TYR 52 114 114 TYR TYR E . n E 1 53 TRP 53 115 115 TRP TRP E . n E 1 54 LYS 54 116 116 LYS LYS E . n E 1 55 LEU 55 117 117 LEU LEU E . n E 1 56 GLU 56 118 118 GLU GLU E . n E 1 57 ASN 57 119 119 ASN ASN E . n E 1 58 GLN 58 120 120 GLN GLN E . n E 1 59 LYS 59 121 121 LYS LYS E . n E 1 60 LYS 60 122 122 LYS LYS E . n E 1 61 LEU 61 123 123 LEU LEU E . n E 1 62 TYR 62 124 124 TYR TYR E . n E 1 63 ARG 63 125 125 ARG ARG E . n E 1 64 GLY 64 126 126 GLY GLY E . n E 1 65 SER 65 127 127 SER SER E . n E 1 66 LEU 66 128 128 LEU LEU E . n E 1 67 LYS 67 129 129 LYS LYS E . n F 1 1 LYS 1 63 ? ? ? F . n F 1 2 THR 2 64 ? ? ? F . n F 1 3 VAL 3 65 ? ? ? F . n F 1 4 ASN 4 66 66 ASN ASN F . n F 1 5 LEU 5 67 67 LEU LEU F . n F 1 6 SER 6 68 68 SER SER F . n F 1 7 ALA 7 69 69 ALA ALA F . n F 1 8 CYS 8 70 70 CYS CYS F . n F 1 9 GLU 9 71 71 GLU GLU F . n F 1 10 VAL 10 72 72 VAL VAL F . n F 1 11 ALA 11 73 73 ALA ALA F . n F 1 12 VAL 12 74 74 VAL VAL F . n F 1 13 LEU 13 75 75 LEU LEU F . n F 1 14 ASP 14 76 76 ASP ASP F . n F 1 15 LEU 15 77 77 LEU LEU F . n F 1 16 TYR 16 78 78 TYR TYR F . n F 1 17 GLU 17 79 79 GLU GLU F . n F 1 18 GLN 18 80 80 GLN GLN F . n F 1 19 SER 19 81 81 SER SER F . n F 1 20 ASN 20 82 82 ASN ASN F . n F 1 21 ILE 21 83 83 ILE ILE F . n F 1 22 ARG 22 84 84 ARG ARG F . n F 1 23 ILE 23 85 85 ILE ILE F . n F 1 24 PRO 24 86 86 PRO PRO F . n F 1 25 SER 25 87 87 SER SER F . n F 1 26 ASP 26 88 88 ASP ASP F . n F 1 27 ILE 27 89 89 ILE ILE F . n F 1 28 ILE 28 90 90 ILE ILE F . n F 1 29 GLU 29 91 91 GLU GLU F . n F 1 30 ASP 30 92 92 ASP ASP F . n F 1 31 LEU 31 93 93 LEU LEU F . n F 1 32 VAL 32 94 94 VAL VAL F . n F 1 33 ASN 33 95 95 ASN ASN F . n F 1 34 GLN 34 96 96 GLN GLN F . n F 1 35 ARG 35 97 97 ARG ARG F . n F 1 36 LEU 36 98 98 LEU LEU F . n F 1 37 GLN 37 99 99 GLN GLN F . n F 1 38 SER 38 100 100 SER SER F . n F 1 39 GLU 39 101 101 GLU GLU F . n F 1 40 GLN 40 102 102 GLN GLN F . n F 1 41 GLU 41 103 103 GLU GLU F . n F 1 42 VAL 42 104 104 VAL VAL F . n F 1 43 LEU 43 105 105 LEU LEU F . n F 1 44 ASN 44 106 106 ASN ASN F . n F 1 45 TYR 45 107 107 TYR TYR F . n F 1 46 ILE 46 108 108 ILE ILE F . n F 1 47 GLU 47 109 109 GLU GLU F . n F 1 48 THR 48 110 110 THR THR F . n F 1 49 GLN 49 111 111 GLN GLN F . n F 1 50 ARG 50 112 112 ARG ARG F . n F 1 51 THR 51 113 113 THR THR F . n F 1 52 TYR 52 114 114 TYR TYR F . n F 1 53 TRP 53 115 115 TRP TRP F . n F 1 54 LYS 54 116 116 LYS LYS F . n F 1 55 LEU 55 117 117 LEU LEU F . n F 1 56 GLU 56 118 118 GLU GLU F . n F 1 57 ASN 57 119 119 ASN ASN F . n F 1 58 GLN 58 120 120 GLN GLN F . n F 1 59 LYS 59 121 121 LYS LYS F . n F 1 60 LYS 60 122 122 LYS LYS F . n F 1 61 LEU 61 123 123 LEU LEU F . n F 1 62 TYR 62 124 124 TYR TYR F . n F 1 63 ARG 63 125 125 ARG ARG F . n F 1 64 GLY 64 126 126 GLY GLY F . n F 1 65 SER 65 127 127 SER SER F . n F 1 66 LEU 66 128 128 LEU LEU F . n F 1 67 LYS 67 129 129 LYS LYS F . n G 2 1 DT 1 9 9 DT DT Y . n G 2 2 DC 2 10 10 DC DC Y . n G 2 3 DC 3 11 11 DC DC Y . n G 2 4 DA 4 12 12 DA DA Y . n G 2 5 DC 5 13 13 DC DC Y . n G 2 6 DC 6 14 14 DC DC Y . n G 2 7 DG 7 15 15 DG DG Y . n G 2 8 DG 8 16 16 DG DG Y . n H 3 1 DC 1 1 1 DC DC Z . n H 3 2 DC 2 2 2 DC DC Z . n H 3 3 DG 3 3 3 DG DG Z . n H 3 4 DG 4 4 4 DG DG Z . n H 3 5 DT 5 5 5 DT DT Z . n H 3 6 DG 6 6 6 DG DG Z . n H 3 7 DG 7 7 7 DG DG Z . n H 3 8 DA 8 8 8 DA DA Z . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 4 HOH 1 2001 2001 HOH HOH A . I 4 HOH 2 2002 2002 HOH HOH A . I 4 HOH 3 2003 2003 HOH HOH A . I 4 HOH 4 2004 2004 HOH HOH A . I 4 HOH 5 2005 2005 HOH HOH A . I 4 HOH 6 2006 2006 HOH HOH A . I 4 HOH 7 2007 2007 HOH HOH A . I 4 HOH 8 2008 2008 HOH HOH A . I 4 HOH 9 2009 2009 HOH HOH A . I 4 HOH 10 2010 2010 HOH HOH A . I 4 HOH 11 2011 2011 HOH HOH A . I 4 HOH 12 2012 2012 HOH HOH A . J 4 HOH 1 2001 2001 HOH HOH B . J 4 HOH 2 2002 2002 HOH HOH B . J 4 HOH 3 2003 2003 HOH HOH B . J 4 HOH 4 2004 2004 HOH HOH B . J 4 HOH 5 2005 2005 HOH HOH B . J 4 HOH 6 2006 2006 HOH HOH B . J 4 HOH 7 2007 2007 HOH HOH B . J 4 HOH 8 2008 2008 HOH HOH B . J 4 HOH 9 2009 2009 HOH HOH B . J 4 HOH 10 2010 2010 HOH HOH B . J 4 HOH 11 2011 2011 HOH HOH B . K 4 HOH 1 2001 2001 HOH HOH C . K 4 HOH 2 2002 2002 HOH HOH C . K 4 HOH 3 2003 2003 HOH HOH C . L 4 HOH 1 2001 2001 HOH HOH D . L 4 HOH 2 2002 2002 HOH HOH D . L 4 HOH 3 2003 2003 HOH HOH D . L 4 HOH 4 2004 2004 HOH HOH D . L 4 HOH 5 2005 2005 HOH HOH D . L 4 HOH 6 2006 2006 HOH HOH D . M 4 HOH 1 2001 2001 HOH HOH E . M 4 HOH 2 2002 2002 HOH HOH E . M 4 HOH 3 2003 2003 HOH HOH E . M 4 HOH 4 2004 2004 HOH HOH E . M 4 HOH 5 2005 2005 HOH HOH E . M 4 HOH 6 2006 2006 HOH HOH E . M 4 HOH 7 2007 2007 HOH HOH E . M 4 HOH 8 2008 2008 HOH HOH E . M 4 HOH 9 2009 2009 HOH HOH E . N 4 HOH 1 2001 2001 HOH HOH F . N 4 HOH 2 2002 2002 HOH HOH F . N 4 HOH 3 2003 2003 HOH HOH F . N 4 HOH 4 2004 2004 HOH HOH F . N 4 HOH 5 2005 2005 HOH HOH F . N 4 HOH 6 2006 2006 HOH HOH F . N 4 HOH 7 2007 2007 HOH HOH F . O 4 HOH 1 2001 2001 HOH HOH Z . O 4 HOH 2 2002 2002 HOH HOH Z . O 4 HOH 3 2003 2003 HOH HOH Z . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 20.1400 9.7025 14.2285 0.0542 0.3400 0.1975 -0.0566 0.1014 -0.0584 2.0447 4.3077 2.7576 -1.2069 -0.3363 1.4267 -0.2690 -0.1114 -0.0341 -0.0558 0.1239 0.0500 0.0022 -0.1843 0.1451 'X-RAY DIFFRACTION' 2 ? refined 19.9246 18.0440 -1.5662 1.3280 0.7389 0.7471 0.1334 -0.0731 -0.0205 79.1442 30.5486 30.0794 3.3714 -8.6290 0.2633 -2.1194 -0.2170 1.2836 -0.7267 1.3863 -1.3732 -0.9213 0.0255 0.7330 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 7 ? ? A 69 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 7 ? ? B 69 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 C 7 ? ? C 69 ? ? ? ? 'X-RAY DIFFRACTION' 4 1 D 7 ? ? D 69 ? ? ? ? 'X-RAY DIFFRACTION' 5 1 E 7 ? ? E 69 ? ? ? ? 'X-RAY DIFFRACTION' 6 1 F 7 ? ? F 69 ? ? ? ? 'X-RAY DIFFRACTION' 7 2 Y 9 ? ? Y 16 ? ? ? ? 'X-RAY DIFFRACTION' 8 2 Z 1 ? ? Z 8 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A SER 127 ? ? N A LYS 129 ? ? 1.64 2 1 N2 Z DG 6 ? ? O Z HOH 2003 ? ? 2.05 3 1 OE2 F GLU 118 ? ? O F HOH 2004 ? ? 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB B SER 68 ? ? OG B SER 68 ? ? 1.507 1.418 0.089 0.013 N 2 1 CG B GLU 71 ? ? CD B GLU 71 ? ? 1.641 1.515 0.126 0.015 N 3 1 CB D SER 68 ? ? OG D SER 68 ? ? 1.524 1.418 0.106 0.013 N 4 1 C2 Y DC 10 ? ? N3 Y DC 10 ? ? 1.402 1.353 0.049 0.008 N 5 1 N3 Y DC 10 ? ? C4 Y DC 10 ? ? 1.289 1.335 -0.046 0.007 N 6 1 C2 Y DC 13 ? ? N3 Y DC 13 ? ? 1.402 1.353 0.049 0.008 N 7 1 C2 Y DC 14 ? ? N3 Y DC 14 ? ? 1.403 1.353 0.050 0.008 N 8 1 C2 Z DC 1 ? ? N3 Z DC 1 ? ? 1.405 1.353 0.052 0.008 N 9 1 C2 Z DC 2 ? ? N3 Z DC 2 ? ? 1.409 1.353 0.056 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 88 ? ? CG A ASP 88 ? ? OD2 A ASP 88 ? ? 126.54 118.30 8.24 0.90 N 2 1 CA A LEU 128 ? ? C A LEU 128 ? ? O A LEU 128 ? ? 148.01 120.10 27.91 2.10 N 3 1 CA B LEU 67 ? ? CB B LEU 67 ? ? CG B LEU 67 ? ? 131.26 115.30 15.96 2.30 N 4 1 CB B ASP 92 ? ? CG B ASP 92 ? ? OD2 B ASP 92 ? ? 123.81 118.30 5.51 0.90 N 5 1 NE B ARG 112 ? ? CZ B ARG 112 ? ? NH1 B ARG 112 ? ? 123.86 120.30 3.56 0.50 N 6 1 NE C ARG 112 ? ? CZ C ARG 112 ? ? NH1 C ARG 112 ? ? 123.56 120.30 3.26 0.50 N 7 1 CB D ASP 92 ? ? CG D ASP 92 ? ? OD2 D ASP 92 ? ? 123.72 118.30 5.42 0.90 N 8 1 NE D ARG 112 ? ? CZ D ARG 112 ? ? NH1 D ARG 112 ? ? 123.44 120.30 3.14 0.50 N 9 1 NE D ARG 112 ? ? CZ D ARG 112 ? ? NH2 D ARG 112 ? ? 117.07 120.30 -3.23 0.50 N 10 1 NE E ARG 125 ? ? CZ E ARG 125 ? ? NH2 E ARG 125 ? ? 123.37 120.30 3.07 0.50 N 11 1 NE F ARG 112 ? ? CZ F ARG 112 ? ? NH1 F ARG 112 ? ? 124.35 120.30 4.05 0.50 N 12 1 O F LEU 128 ? ? C F LEU 128 ? ? N F LYS 129 ? ? 111.87 122.70 -10.83 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 95 ? ? -68.77 49.52 2 1 GLN A 96 ? ? -153.22 -3.50 3 1 ARG A 97 ? ? 27.43 54.15 4 1 GLU B 91 ? ? -26.52 -61.29 5 1 ASN B 95 ? ? -65.44 27.43 6 1 GLN B 96 ? ? -150.22 -3.17 7 1 ARG B 97 ? ? 35.52 46.31 8 1 LEU B 128 ? ? 35.57 -20.81 9 1 ASN C 82 ? ? 39.72 53.75 10 1 GLN C 96 ? ? -159.45 -2.42 11 1 ARG C 97 ? ? 16.47 56.11 12 1 LEU C 128 ? ? 45.13 -92.26 13 1 PRO D 86 ? ? -48.72 150.87 14 1 GLU D 91 ? ? -36.33 -71.85 15 1 ASN D 95 ? ? -76.52 47.71 16 1 GLN D 96 ? ? -142.92 -6.12 17 1 ARG D 97 ? ? 37.18 39.86 18 1 SER D 127 ? ? -75.04 -107.18 19 1 LEU D 128 ? ? 113.90 -34.09 20 1 ASN E 82 ? ? 37.72 55.84 21 1 ASN E 95 ? ? -66.13 48.22 22 1 GLN E 96 ? ? -144.87 -17.63 23 1 ARG E 97 ? ? 35.00 54.34 24 1 SER E 127 ? ? -93.10 -72.37 25 1 LEU E 128 ? ? 45.19 121.44 26 1 ASN F 95 ? ? -60.85 43.26 27 1 GLN F 96 ? ? -140.11 -13.26 28 1 ARG F 97 ? ? 33.29 47.98 29 1 LEU F 128 ? ? -173.70 36.20 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 LEU _pdbx_validate_polymer_linkage.auth_seq_id_1 128 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 LYS _pdbx_validate_polymer_linkage.auth_seq_id_2 129 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 2.15 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 129 ? CA ? A LYS 67 CA 2 1 Y 1 A LYS 129 ? C ? A LYS 67 C 3 1 Y 1 A LYS 129 ? O ? A LYS 67 O 4 1 Y 1 A LYS 129 ? CB ? A LYS 67 CB 5 1 Y 1 A LYS 129 ? CG ? A LYS 67 CG 6 1 Y 1 A LYS 129 ? CD ? A LYS 67 CD 7 1 Y 1 A LYS 129 ? CE ? A LYS 67 CE 8 1 Y 1 A LYS 129 ? NZ ? A LYS 67 NZ 9 1 Y 1 B LYS 129 ? CA ? B LYS 67 CA 10 1 Y 1 B LYS 129 ? C ? B LYS 67 C 11 1 Y 1 B LYS 129 ? O ? B LYS 67 O 12 1 Y 1 B LYS 129 ? CB ? B LYS 67 CB 13 1 Y 1 B LYS 129 ? CG ? B LYS 67 CG 14 1 Y 1 B LYS 129 ? CD ? B LYS 67 CD 15 1 Y 1 B LYS 129 ? CE ? B LYS 67 CE 16 1 Y 1 B LYS 129 ? NZ ? B LYS 67 NZ 17 1 Y 1 C LYS 129 ? CA ? C LYS 67 CA 18 1 Y 1 C LYS 129 ? C ? C LYS 67 C 19 1 Y 1 C LYS 129 ? O ? C LYS 67 O 20 1 Y 1 C LYS 129 ? CB ? C LYS 67 CB 21 1 Y 1 C LYS 129 ? CG ? C LYS 67 CG 22 1 Y 1 C LYS 129 ? CD ? C LYS 67 CD 23 1 Y 1 C LYS 129 ? CE ? C LYS 67 CE 24 1 Y 1 C LYS 129 ? NZ ? C LYS 67 NZ 25 1 Y 1 D LYS 129 ? CA ? D LYS 67 CA 26 1 Y 1 D LYS 129 ? C ? D LYS 67 C 27 1 Y 1 D LYS 129 ? O ? D LYS 67 O 28 1 Y 1 D LYS 129 ? CB ? D LYS 67 CB 29 1 Y 1 D LYS 129 ? CG ? D LYS 67 CG 30 1 Y 1 D LYS 129 ? CD ? D LYS 67 CD 31 1 Y 1 D LYS 129 ? CE ? D LYS 67 CE 32 1 Y 1 D LYS 129 ? NZ ? D LYS 67 NZ 33 1 Y 1 E LYS 129 ? CA ? E LYS 67 CA 34 1 Y 1 E LYS 129 ? C ? E LYS 67 C 35 1 Y 1 E LYS 129 ? O ? E LYS 67 O 36 1 Y 1 E LYS 129 ? CB ? E LYS 67 CB 37 1 Y 1 E LYS 129 ? CG ? E LYS 67 CG 38 1 Y 1 E LYS 129 ? CD ? E LYS 67 CD 39 1 Y 1 E LYS 129 ? CE ? E LYS 67 CE 40 1 Y 1 E LYS 129 ? NZ ? E LYS 67 NZ 41 1 Y 1 F LYS 129 ? CA ? F LYS 67 CA 42 1 Y 1 F LYS 129 ? C ? F LYS 67 C 43 1 Y 1 F LYS 129 ? O ? F LYS 67 O 44 1 Y 1 F LYS 129 ? CB ? F LYS 67 CB 45 1 Y 1 F LYS 129 ? CG ? F LYS 67 CG 46 1 Y 1 F LYS 129 ? CD ? F LYS 67 CD 47 1 Y 1 F LYS 129 ? CE ? F LYS 67 CE 48 1 Y 1 F LYS 129 ? NZ ? F LYS 67 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 63 ? A LYS 1 2 1 Y 1 A THR 64 ? A THR 2 3 1 Y 1 A VAL 65 ? A VAL 3 4 1 Y 1 B LYS 63 ? B LYS 1 5 1 Y 1 B THR 64 ? B THR 2 6 1 Y 1 B VAL 65 ? B VAL 3 7 1 Y 1 C LYS 63 ? C LYS 1 8 1 Y 1 C THR 64 ? C THR 2 9 1 Y 1 C VAL 65 ? C VAL 3 10 1 Y 1 D LYS 63 ? D LYS 1 11 1 Y 1 D THR 64 ? D THR 2 12 1 Y 1 D VAL 65 ? D VAL 3 13 1 Y 1 E LYS 63 ? E LYS 1 14 1 Y 1 E THR 64 ? E THR 2 15 1 Y 1 E VAL 65 ? E VAL 3 16 1 Y 1 F LYS 63 ? F LYS 1 17 1 Y 1 F THR 64 ? F THR 2 18 1 Y 1 F VAL 65 ? F VAL 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 PRO N N N N 352 PRO CA C N S 353 PRO C C N N 354 PRO O O N N 355 PRO CB C N N 356 PRO CG C N N 357 PRO CD C N N 358 PRO OXT O N N 359 PRO H H N N 360 PRO HA H N N 361 PRO HB2 H N N 362 PRO HB3 H N N 363 PRO HG2 H N N 364 PRO HG3 H N N 365 PRO HD2 H N N 366 PRO HD3 H N N 367 PRO HXT H N N 368 SER N N N N 369 SER CA C N S 370 SER C C N N 371 SER O O N N 372 SER CB C N N 373 SER OG O N N 374 SER OXT O N N 375 SER H H N N 376 SER H2 H N N 377 SER HA H N N 378 SER HB2 H N N 379 SER HB3 H N N 380 SER HG H N N 381 SER HXT H N N 382 THR N N N N 383 THR CA C N S 384 THR C C N N 385 THR O O N N 386 THR CB C N R 387 THR OG1 O N N 388 THR CG2 C N N 389 THR OXT O N N 390 THR H H N N 391 THR H2 H N N 392 THR HA H N N 393 THR HB H N N 394 THR HG1 H N N 395 THR HG21 H N N 396 THR HG22 H N N 397 THR HG23 H N N 398 THR HXT H N N 399 TRP N N N N 400 TRP CA C N S 401 TRP C C N N 402 TRP O O N N 403 TRP CB C N N 404 TRP CG C Y N 405 TRP CD1 C Y N 406 TRP CD2 C Y N 407 TRP NE1 N Y N 408 TRP CE2 C Y N 409 TRP CE3 C Y N 410 TRP CZ2 C Y N 411 TRP CZ3 C Y N 412 TRP CH2 C Y N 413 TRP OXT O N N 414 TRP H H N N 415 TRP H2 H N N 416 TRP HA H N N 417 TRP HB2 H N N 418 TRP HB3 H N N 419 TRP HD1 H N N 420 TRP HE1 H N N 421 TRP HE3 H N N 422 TRP HZ2 H N N 423 TRP HZ3 H N N 424 TRP HH2 H N N 425 TRP HXT H N N 426 TYR N N N N 427 TYR CA C N S 428 TYR C C N N 429 TYR O O N N 430 TYR CB C N N 431 TYR CG C Y N 432 TYR CD1 C Y N 433 TYR CD2 C Y N 434 TYR CE1 C Y N 435 TYR CE2 C Y N 436 TYR CZ C Y N 437 TYR OH O N N 438 TYR OXT O N N 439 TYR H H N N 440 TYR H2 H N N 441 TYR HA H N N 442 TYR HB2 H N N 443 TYR HB3 H N N 444 TYR HD1 H N N 445 TYR HD2 H N N 446 TYR HE1 H N N 447 TYR HE2 H N N 448 TYR HH H N N 449 TYR HXT H N N 450 VAL N N N N 451 VAL CA C N S 452 VAL C C N N 453 VAL O O N N 454 VAL CB C N N 455 VAL CG1 C N N 456 VAL CG2 C N N 457 VAL OXT O N N 458 VAL H H N N 459 VAL H2 H N N 460 VAL HA H N N 461 VAL HB H N N 462 VAL HG11 H N N 463 VAL HG12 H N N 464 VAL HG13 H N N 465 VAL HG21 H N N 466 VAL HG22 H N N 467 VAL HG23 H N N 468 VAL HXT H N N 469 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 PRO N CA sing N N 346 PRO N CD sing N N 347 PRO N H sing N N 348 PRO CA C sing N N 349 PRO CA CB sing N N 350 PRO CA HA sing N N 351 PRO C O doub N N 352 PRO C OXT sing N N 353 PRO CB CG sing N N 354 PRO CB HB2 sing N N 355 PRO CB HB3 sing N N 356 PRO CG CD sing N N 357 PRO CG HG2 sing N N 358 PRO CG HG3 sing N N 359 PRO CD HD2 sing N N 360 PRO CD HD3 sing N N 361 PRO OXT HXT sing N N 362 SER N CA sing N N 363 SER N H sing N N 364 SER N H2 sing N N 365 SER CA C sing N N 366 SER CA CB sing N N 367 SER CA HA sing N N 368 SER C O doub N N 369 SER C OXT sing N N 370 SER CB OG sing N N 371 SER CB HB2 sing N N 372 SER CB HB3 sing N N 373 SER OG HG sing N N 374 SER OXT HXT sing N N 375 THR N CA sing N N 376 THR N H sing N N 377 THR N H2 sing N N 378 THR CA C sing N N 379 THR CA CB sing N N 380 THR CA HA sing N N 381 THR C O doub N N 382 THR C OXT sing N N 383 THR CB OG1 sing N N 384 THR CB CG2 sing N N 385 THR CB HB sing N N 386 THR OG1 HG1 sing N N 387 THR CG2 HG21 sing N N 388 THR CG2 HG22 sing N N 389 THR CG2 HG23 sing N N 390 THR OXT HXT sing N N 391 TRP N CA sing N N 392 TRP N H sing N N 393 TRP N H2 sing N N 394 TRP CA C sing N N 395 TRP CA CB sing N N 396 TRP CA HA sing N N 397 TRP C O doub N N 398 TRP C OXT sing N N 399 TRP CB CG sing N N 400 TRP CB HB2 sing N N 401 TRP CB HB3 sing N N 402 TRP CG CD1 doub Y N 403 TRP CG CD2 sing Y N 404 TRP CD1 NE1 sing Y N 405 TRP CD1 HD1 sing N N 406 TRP CD2 CE2 doub Y N 407 TRP CD2 CE3 sing Y N 408 TRP NE1 CE2 sing Y N 409 TRP NE1 HE1 sing N N 410 TRP CE2 CZ2 sing Y N 411 TRP CE3 CZ3 doub Y N 412 TRP CE3 HE3 sing N N 413 TRP CZ2 CH2 doub Y N 414 TRP CZ2 HZ2 sing N N 415 TRP CZ3 CH2 sing Y N 416 TRP CZ3 HZ3 sing N N 417 TRP CH2 HH2 sing N N 418 TRP OXT HXT sing N N 419 TYR N CA sing N N 420 TYR N H sing N N 421 TYR N H2 sing N N 422 TYR CA C sing N N 423 TYR CA CB sing N N 424 TYR CA HA sing N N 425 TYR C O doub N N 426 TYR C OXT sing N N 427 TYR CB CG sing N N 428 TYR CB HB2 sing N N 429 TYR CB HB3 sing N N 430 TYR CG CD1 doub Y N 431 TYR CG CD2 sing Y N 432 TYR CD1 CE1 sing Y N 433 TYR CD1 HD1 sing N N 434 TYR CD2 CE2 doub Y N 435 TYR CD2 HD2 sing N N 436 TYR CE1 CZ doub Y N 437 TYR CE1 HE1 sing N N 438 TYR CE2 CZ sing Y N 439 TYR CE2 HE2 sing N N 440 TYR CZ OH sing N N 441 TYR OH HH sing N N 442 TYR OXT HXT sing N N 443 VAL N CA sing N N 444 VAL N H sing N N 445 VAL N H2 sing N N 446 VAL CA C sing N N 447 VAL CA CB sing N N 448 VAL CA HA sing N N 449 VAL C O doub N N 450 VAL C OXT sing N N 451 VAL CB CG1 sing N N 452 VAL CB CG2 sing N N 453 VAL CB HB sing N N 454 VAL CG1 HG11 sing N N 455 VAL CG1 HG12 sing N N 456 VAL CG1 HG13 sing N N 457 VAL CG2 HG21 sing N N 458 VAL CG2 HG22 sing N N 459 VAL CG2 HG23 sing N N 460 VAL OXT HXT sing N N 461 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2C5R 'double helix' 2C5R 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 G DT 1 1_555 H DA 8 1_555 0.558 -0.232 0.224 -2.131 6.810 -4.281 1 Y_DT9:DA8_Z Y 9 ? Z 8 ? 20 1 1 G DC 2 1_555 H DG 7 1_555 0.016 -0.192 0.107 2.032 4.774 -8.327 2 Y_DC10:DG7_Z Y 10 ? Z 7 ? 19 1 1 G DC 3 1_555 H DG 6 1_555 0.168 -0.072 -0.429 2.763 2.872 -3.373 3 Y_DC11:DG6_Z Y 11 ? Z 6 ? 19 1 1 G DA 4 1_555 H DT 5 1_555 -0.239 -0.152 0.233 5.507 -1.762 -7.162 4 Y_DA12:DT5_Z Y 12 ? Z 5 ? 20 1 1 G DC 5 1_555 H DG 4 1_555 0.380 -0.168 0.072 -2.877 1.949 -4.552 5 Y_DC13:DG4_Z Y 13 ? Z 4 ? 19 1 1 G DC 6 1_555 H DG 3 1_555 0.259 0.084 0.638 2.599 -1.324 -3.859 6 Y_DC14:DG3_Z Y 14 ? Z 3 ? 19 1 1 G DG 7 1_555 H DC 2 1_555 -0.282 -0.055 0.306 9.319 2.078 -3.569 7 Y_DG15:DC2_Z Y 15 ? Z 2 ? 19 1 1 G DG 8 1_555 H DC 1 1_555 -0.576 0.225 0.184 10.064 17.374 1.832 8 Y_DG16:DC1_Z Y 16 ? Z 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 G DT 1 1_555 H DA 8 1_555 G DC 2 1_555 H DG 7 1_555 -0.163 -0.411 3.511 1.046 -6.162 34.842 0.307 0.435 3.524 -10.189 -1.729 35.381 1 YY_DT9DC10:DG7DA8_ZZ Y 9 ? Z 8 ? Y 10 ? Z 7 ? 1 G DC 2 1_555 H DG 7 1_555 G DC 3 1_555 H DG 6 1_555 0.063 -0.212 3.418 1.942 -4.195 37.681 0.235 0.163 3.420 -6.466 -2.992 37.954 2 YY_DC10DC11:DG6DG7_ZZ Y 10 ? Z 7 ? Y 11 ? Z 6 ? 1 G DC 3 1_555 H DG 6 1_555 G DA 4 1_555 H DT 5 1_555 -0.116 -0.376 3.351 -2.848 -2.285 33.279 -0.265 -0.282 3.366 -3.974 4.953 33.473 3 YY_DC11DA12:DT5DG6_ZZ Y 11 ? Z 6 ? Y 12 ? Z 5 ? 1 G DA 4 1_555 H DT 5 1_555 G DC 5 1_555 H DG 4 1_555 0.084 -0.334 3.686 0.472 -2.852 38.714 -0.109 -0.061 3.701 -4.294 -0.711 38.818 4 YY_DA12DC13:DG4DT5_ZZ Y 12 ? Z 5 ? Y 13 ? Z 4 ? 1 G DC 5 1_555 H DG 4 1_555 G DC 6 1_555 H DG 3 1_555 -0.193 -0.263 3.329 -3.373 -2.287 34.900 -0.086 -0.195 3.342 -3.797 5.600 35.130 5 YY_DC13DC14:DG3DG4_ZZ Y 13 ? Z 4 ? Y 14 ? Z 3 ? 1 G DC 6 1_555 H DG 3 1_555 G DG 7 1_555 H DC 2 1_555 -0.157 -0.374 3.070 -0.230 -7.370 32.540 0.514 0.237 3.080 -12.946 0.404 33.343 6 YY_DC14DG15:DC2DG3_ZZ Y 14 ? Z 3 ? Y 15 ? Z 2 ? 1 G DG 7 1_555 H DC 2 1_555 G DG 8 1_555 H DC 1 1_555 0.388 -0.176 3.720 0.352 -7.643 36.211 0.899 -0.557 3.684 -12.130 -0.558 36.984 7 YY_DG15DG16:DC1DC2_ZZ Y 15 ? Z 2 ? Y 16 ? Z 1 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2BNK _pdbx_initial_refinement_model.details 'PDB ENTRY 2BNK' #