data_2CKL # _entry.id 2CKL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CKL pdb_00002ckl 10.2210/pdb2ckl/pdb PDBE EBI-28251 ? ? WWPDB D_1290028251 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.value' 17 3 'Structure model' '_struct_conn.pdbx_dist_value' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CKL _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-04-20 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Buchwald, G.' 1 'van der Stoop, P.' 2 'Weichenrieder, O.' 3 'Perrakis, A.' 4 'van Lohuizen, M.' 5 'Sixma, T.K.' 6 # _citation.id primary _citation.title 'Structure and E3-Ligase Activity of the Ring-Ring Complex of Polycomb Proteins Bmi1 and Ring1B.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 25 _citation.page_first 2465 _citation.page_last ? _citation.year 2006 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16710298 _citation.pdbx_database_id_DOI 10.1038/SJ.EMBOJ.7601144 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Buchwald, G.' 1 ? primary 'Van Der Stoop, P.' 2 ? primary 'Weichenrieder, O.' 3 ? primary 'Perrakis, A.' 4 ? primary 'Van Lohuizen, M.' 5 ? primary 'Sixma, T.K.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'POLYCOMB GROUP RING FINGER PROTEIN 4' 12525.765 1 ? ? 'RING DOMAIN, RESIDUES 1-108' ? 2 polymer man 'UBIQUITIN LIGASE PROTEIN RING2' 18727.543 1 6.3.2.- ? 'RING DOMAIN, RESIDUES 1-159' ? 3 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 4 non-polymer syn 'IODIDE ION' 126.904 2 ? ? ? ? 5 water nat water 18.015 123 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'BMI1, POLYCOMB COMPLEX PROTEIN BMI-1' 2 'RING1B, RING FINGER PROTEIN 2, RING FINGER PROTEIN 1B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVY KLVPGLFKNEMKRRRDFYAAHPSADAAN ; ;MHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVY KLVPGLFKNEMKRRRDFYAAHPSADAAN ; A ? 2 'polypeptide(L)' no no ;GPLGSHMSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCAD CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMN RLQRG ; ;GPLGSHMSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCAD CIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMN RLQRG ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'IODIDE ION' IOD 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 ARG n 1 4 THR n 1 5 THR n 1 6 ARG n 1 7 ILE n 1 8 LYS n 1 9 ILE n 1 10 THR n 1 11 GLU n 1 12 LEU n 1 13 ASN n 1 14 PRO n 1 15 HIS n 1 16 LEU n 1 17 MET n 1 18 CYS n 1 19 VAL n 1 20 LEU n 1 21 CYS n 1 22 GLY n 1 23 GLY n 1 24 TYR n 1 25 PHE n 1 26 ILE n 1 27 ASP n 1 28 ALA n 1 29 THR n 1 30 THR n 1 31 ILE n 1 32 ILE n 1 33 GLU n 1 34 CYS n 1 35 LEU n 1 36 HIS n 1 37 SER n 1 38 PHE n 1 39 CYS n 1 40 LYS n 1 41 THR n 1 42 CYS n 1 43 ILE n 1 44 VAL n 1 45 ARG n 1 46 TYR n 1 47 LEU n 1 48 GLU n 1 49 THR n 1 50 SER n 1 51 LYS n 1 52 TYR n 1 53 CYS n 1 54 PRO n 1 55 ILE n 1 56 CYS n 1 57 ASP n 1 58 VAL n 1 59 GLN n 1 60 VAL n 1 61 HIS n 1 62 LYS n 1 63 THR n 1 64 ARG n 1 65 PRO n 1 66 LEU n 1 67 LEU n 1 68 ASN n 1 69 ILE n 1 70 ARG n 1 71 SER n 1 72 ASP n 1 73 LYS n 1 74 THR n 1 75 LEU n 1 76 GLN n 1 77 ASP n 1 78 ILE n 1 79 VAL n 1 80 TYR n 1 81 LYS n 1 82 LEU n 1 83 VAL n 1 84 PRO n 1 85 GLY n 1 86 LEU n 1 87 PHE n 1 88 LYS n 1 89 ASN n 1 90 GLU n 1 91 MET n 1 92 LYS n 1 93 ARG n 1 94 ARG n 1 95 ARG n 1 96 ASP n 1 97 PHE n 1 98 TYR n 1 99 ALA n 1 100 ALA n 1 101 HIS n 1 102 PRO n 1 103 SER n 1 104 ALA n 1 105 ASP n 1 106 ALA n 1 107 ALA n 1 108 ASN n 2 1 GLY n 2 2 PRO n 2 3 LEU n 2 4 GLY n 2 5 SER n 2 6 HIS n 2 7 MET n 2 8 SER n 2 9 GLN n 2 10 ALA n 2 11 VAL n 2 12 GLN n 2 13 THR n 2 14 ASN n 2 15 GLY n 2 16 THR n 2 17 GLN n 2 18 PRO n 2 19 LEU n 2 20 SER n 2 21 LYS n 2 22 THR n 2 23 TRP n 2 24 GLU n 2 25 LEU n 2 26 SER n 2 27 LEU n 2 28 TYR n 2 29 GLU n 2 30 LEU n 2 31 GLN n 2 32 ARG n 2 33 THR n 2 34 PRO n 2 35 GLN n 2 36 GLU n 2 37 ALA n 2 38 ILE n 2 39 THR n 2 40 ASP n 2 41 GLY n 2 42 LEU n 2 43 GLU n 2 44 ILE n 2 45 VAL n 2 46 VAL n 2 47 SER n 2 48 PRO n 2 49 ARG n 2 50 SER n 2 51 LEU n 2 52 HIS n 2 53 SER n 2 54 GLU n 2 55 LEU n 2 56 MET n 2 57 CYS n 2 58 PRO n 2 59 ILE n 2 60 CYS n 2 61 LEU n 2 62 ASP n 2 63 MET n 2 64 LEU n 2 65 LYS n 2 66 ASN n 2 67 THR n 2 68 MET n 2 69 THR n 2 70 THR n 2 71 LYS n 2 72 GLU n 2 73 CYS n 2 74 LEU n 2 75 HIS n 2 76 ARG n 2 77 PHE n 2 78 CYS n 2 79 ALA n 2 80 ASP n 2 81 CYS n 2 82 ILE n 2 83 ILE n 2 84 THR n 2 85 ALA n 2 86 LEU n 2 87 ARG n 2 88 SER n 2 89 GLY n 2 90 ASN n 2 91 LYS n 2 92 GLU n 2 93 CYS n 2 94 PRO n 2 95 THR n 2 96 CYS n 2 97 ARG n 2 98 LYS n 2 99 LYS n 2 100 LEU n 2 101 VAL n 2 102 SER n 2 103 LYS n 2 104 ARG n 2 105 SER n 2 106 LEU n 2 107 ARG n 2 108 PRO n 2 109 ASP n 2 110 PRO n 2 111 ASN n 2 112 PHE n 2 113 ASP n 2 114 ALA n 2 115 LEU n 2 116 ILE n 2 117 SER n 2 118 LYS n 2 119 ILE n 2 120 TYR n 2 121 PRO n 2 122 SER n 2 123 ARG n 2 124 ASP n 2 125 GLU n 2 126 TYR n 2 127 GLU n 2 128 ALA n 2 129 HIS n 2 130 GLN n 2 131 GLU n 2 132 ARG n 2 133 VAL n 2 134 LEU n 2 135 ALA n 2 136 ARG n 2 137 ILE n 2 138 ASN n 2 139 LYS n 2 140 HIS n 2 141 ASN n 2 142 ASN n 2 143 GLN n 2 144 GLN n 2 145 ALA n 2 146 LEU n 2 147 SER n 2 148 HIS n 2 149 SER n 2 150 ILE n 2 151 GLU n 2 152 GLU n 2 153 GLY n 2 154 LEU n 2 155 LYS n 2 156 ILE n 2 157 GLN n 2 158 ALA n 2 159 MET n 2 160 ASN n 2 161 ARG n 2 162 LEU n 2 163 GLN n 2 164 ARG n 2 165 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? MOUSE ? ? ? ? ? ? ? ? 'MUS MUSCULUS' 10090 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? 'ROSETTA PLYS S' ? ? ? ? ? ? ? ? 'PGEX6P 2RBS' ? ? ? ? ? 2 1 sample ? ? ? MOUSE ? ? ? ? ? ? ? ? 'MUS MUSCULUS' 10090 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? 'ROSETTE PLYSS' ? ? ? ? ? ? ? ? 'PGEX6P 2RBS' ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 HIS 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 CYS 18 18 18 CYS CYS A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 CYS 34 34 34 CYS CYS A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 HIS 36 36 36 HIS HIS A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 CYS 53 53 53 CYS CYS A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 CYS 56 56 56 CYS CYS A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 HIS 61 61 61 HIS HIS A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 MET 91 91 91 MET MET A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 ALA 104 104 ? ? ? A . n A 1 105 ASP 105 105 ? ? ? A . n A 1 106 ALA 106 106 ? ? ? A . n A 1 107 ALA 107 107 ? ? ? A . n A 1 108 ASN 108 108 ? ? ? A . n B 2 1 GLY 1 -5 ? ? ? B . n B 2 2 PRO 2 -4 ? ? ? B . n B 2 3 LEU 3 -3 ? ? ? B . n B 2 4 GLY 4 -2 ? ? ? B . n B 2 5 SER 5 -1 ? ? ? B . n B 2 6 HIS 6 0 ? ? ? B . n B 2 7 MET 7 1 ? ? ? B . n B 2 8 SER 8 2 ? ? ? B . n B 2 9 GLN 9 3 ? ? ? B . n B 2 10 ALA 10 4 ? ? ? B . n B 2 11 VAL 11 5 ? ? ? B . n B 2 12 GLN 12 6 ? ? ? B . n B 2 13 THR 13 7 ? ? ? B . n B 2 14 ASN 14 8 ? ? ? B . n B 2 15 GLY 15 9 ? ? ? B . n B 2 16 THR 16 10 ? ? ? B . n B 2 17 GLN 17 11 ? ? ? B . n B 2 18 PRO 18 12 ? ? ? B . n B 2 19 LEU 19 13 ? ? ? B . n B 2 20 SER 20 14 ? ? ? B . n B 2 21 LYS 21 15 15 LYS LYS B . n B 2 22 THR 22 16 16 THR THR B . n B 2 23 TRP 23 17 17 TRP TRP B . n B 2 24 GLU 24 18 18 GLU GLU B . n B 2 25 LEU 25 19 19 LEU LEU B . n B 2 26 SER 26 20 20 SER SER B . n B 2 27 LEU 27 21 21 LEU LEU B . n B 2 28 TYR 28 22 22 TYR TYR B . n B 2 29 GLU 29 23 23 GLU GLU B . n B 2 30 LEU 30 24 24 LEU LEU B . n B 2 31 GLN 31 25 25 GLN GLN B . n B 2 32 ARG 32 26 26 ARG ARG B . n B 2 33 THR 33 27 27 THR THR B . n B 2 34 PRO 34 28 28 PRO PRO B . n B 2 35 GLN 35 29 29 GLN GLN B . n B 2 36 GLU 36 30 30 GLU GLU B . n B 2 37 ALA 37 31 31 ALA ALA B . n B 2 38 ILE 38 32 32 ILE ILE B . n B 2 39 THR 39 33 33 THR THR B . n B 2 40 ASP 40 34 34 ASP ASP B . n B 2 41 GLY 41 35 35 GLY GLY B . n B 2 42 LEU 42 36 36 LEU LEU B . n B 2 43 GLU 43 37 37 GLU GLU B . n B 2 44 ILE 44 38 38 ILE ILE B . n B 2 45 VAL 45 39 39 VAL VAL B . n B 2 46 VAL 46 40 ? ? ? B . n B 2 47 SER 47 41 ? ? ? B . n B 2 48 PRO 48 42 ? ? ? B . n B 2 49 ARG 49 43 ? ? ? B . n B 2 50 SER 50 44 44 SER SER B . n B 2 51 LEU 51 45 45 LEU LEU B . n B 2 52 HIS 52 46 46 HIS HIS B . n B 2 53 SER 53 47 47 SER SER B . n B 2 54 GLU 54 48 48 GLU GLU B . n B 2 55 LEU 55 49 49 LEU LEU B . n B 2 56 MET 56 50 50 MET MET B . n B 2 57 CYS 57 51 51 CYS CYS B . n B 2 58 PRO 58 52 52 PRO PRO B . n B 2 59 ILE 59 53 53 ILE ILE B . n B 2 60 CYS 60 54 54 CYS CYS B . n B 2 61 LEU 61 55 55 LEU LEU B . n B 2 62 ASP 62 56 56 ASP ASP B . n B 2 63 MET 63 57 57 MET MET B . n B 2 64 LEU 64 58 58 LEU LEU B . n B 2 65 LYS 65 59 59 LYS LYS B . n B 2 66 ASN 66 60 60 ASN ASN B . n B 2 67 THR 67 61 61 THR THR B . n B 2 68 MET 68 62 62 MET MET B . n B 2 69 THR 69 63 63 THR THR B . n B 2 70 THR 70 64 64 THR THR B . n B 2 71 LYS 71 65 65 LYS LYS B . n B 2 72 GLU 72 66 66 GLU GLU B . n B 2 73 CYS 73 67 67 CYS CYS B . n B 2 74 LEU 74 68 68 LEU LEU B . n B 2 75 HIS 75 69 69 HIS HIS B . n B 2 76 ARG 76 70 70 ARG ARG B . n B 2 77 PHE 77 71 71 PHE PHE B . n B 2 78 CYS 78 72 72 CYS CYS B . n B 2 79 ALA 79 73 73 ALA ALA B . n B 2 80 ASP 80 74 74 ASP ASP B . n B 2 81 CYS 81 75 75 CYS CYS B . n B 2 82 ILE 82 76 76 ILE ILE B . n B 2 83 ILE 83 77 77 ILE ILE B . n B 2 84 THR 84 78 78 THR THR B . n B 2 85 ALA 85 79 79 ALA ALA B . n B 2 86 LEU 86 80 80 LEU LEU B . n B 2 87 ARG 87 81 81 ARG ARG B . n B 2 88 SER 88 82 82 SER SER B . n B 2 89 GLY 89 83 83 GLY GLY B . n B 2 90 ASN 90 84 84 ASN ASN B . n B 2 91 LYS 91 85 85 LYS LYS B . n B 2 92 GLU 92 86 86 GLU GLU B . n B 2 93 CYS 93 87 87 CYS CYS B . n B 2 94 PRO 94 88 88 PRO PRO B . n B 2 95 THR 95 89 89 THR THR B . n B 2 96 CYS 96 90 90 CYS CYS B . n B 2 97 ARG 97 91 91 ARG ARG B . n B 2 98 LYS 98 92 92 LYS LYS B . n B 2 99 LYS 99 93 93 LYS LYS B . n B 2 100 LEU 100 94 94 LEU LEU B . n B 2 101 VAL 101 95 95 VAL VAL B . n B 2 102 SER 102 96 96 SER SER B . n B 2 103 LYS 103 97 97 LYS LYS B . n B 2 104 ARG 104 98 98 ARG ARG B . n B 2 105 SER 105 99 99 SER SER B . n B 2 106 LEU 106 100 100 LEU LEU B . n B 2 107 ARG 107 101 101 ARG ARG B . n B 2 108 PRO 108 102 102 PRO PRO B . n B 2 109 ASP 109 103 103 ASP ASP B . n B 2 110 PRO 110 104 104 PRO PRO B . n B 2 111 ASN 111 105 105 ASN ASN B . n B 2 112 PHE 112 106 106 PHE PHE B . n B 2 113 ASP 113 107 107 ASP ASP B . n B 2 114 ALA 114 108 108 ALA ALA B . n B 2 115 LEU 115 109 109 LEU LEU B . n B 2 116 ILE 116 110 110 ILE ILE B . n B 2 117 SER 117 111 111 SER SER B . n B 2 118 LYS 118 112 112 LYS LYS B . n B 2 119 ILE 119 113 113 ILE ILE B . n B 2 120 TYR 120 114 114 TYR TYR B . n B 2 121 PRO 121 115 ? ? ? B . n B 2 122 SER 122 116 ? ? ? B . n B 2 123 ARG 123 117 ? ? ? B . n B 2 124 ASP 124 118 ? ? ? B . n B 2 125 GLU 125 119 ? ? ? B . n B 2 126 TYR 126 120 ? ? ? B . n B 2 127 GLU 127 121 ? ? ? B . n B 2 128 ALA 128 122 ? ? ? B . n B 2 129 HIS 129 123 ? ? ? B . n B 2 130 GLN 130 124 ? ? ? B . n B 2 131 GLU 131 125 ? ? ? B . n B 2 132 ARG 132 126 ? ? ? B . n B 2 133 VAL 133 127 ? ? ? B . n B 2 134 LEU 134 128 ? ? ? B . n B 2 135 ALA 135 129 ? ? ? B . n B 2 136 ARG 136 130 ? ? ? B . n B 2 137 ILE 137 131 ? ? ? B . n B 2 138 ASN 138 132 ? ? ? B . n B 2 139 LYS 139 133 ? ? ? B . n B 2 140 HIS 140 134 ? ? ? B . n B 2 141 ASN 141 135 ? ? ? B . n B 2 142 ASN 142 136 ? ? ? B . n B 2 143 GLN 143 137 ? ? ? B . n B 2 144 GLN 144 138 ? ? ? B . n B 2 145 ALA 145 139 ? ? ? B . n B 2 146 LEU 146 140 ? ? ? B . n B 2 147 SER 147 141 ? ? ? B . n B 2 148 HIS 148 142 ? ? ? B . n B 2 149 SER 149 143 ? ? ? B . n B 2 150 ILE 150 144 ? ? ? B . n B 2 151 GLU 151 145 ? ? ? B . n B 2 152 GLU 152 146 ? ? ? B . n B 2 153 GLY 153 147 ? ? ? B . n B 2 154 LEU 154 148 ? ? ? B . n B 2 155 LYS 155 149 ? ? ? B . n B 2 156 ILE 156 150 ? ? ? B . n B 2 157 GLN 157 151 ? ? ? B . n B 2 158 ALA 158 152 ? ? ? B . n B 2 159 MET 159 153 ? ? ? B . n B 2 160 ASN 160 154 ? ? ? B . n B 2 161 ARG 161 155 ? ? ? B . n B 2 162 LEU 162 156 ? ? ? B . n B 2 163 GLN 163 157 ? ? ? B . n B 2 164 ARG 164 158 ? ? ? B . n B 2 165 GLY 165 159 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 1104 1104 ZN ZN A . D 3 ZN 1 1105 1105 ZN ZN A . E 4 IOD 1 1106 1106 IOD IOD A . F 3 ZN 1 1115 1115 ZN ZN B . G 3 ZN 1 1116 1116 ZN ZN B . H 4 IOD 1 1117 1117 IOD IOD B . I 5 HOH 1 2001 2001 HOH HOH A . I 5 HOH 2 2002 2002 HOH HOH A . I 5 HOH 3 2003 2003 HOH HOH A . I 5 HOH 4 2004 2004 HOH HOH A . I 5 HOH 5 2005 2005 HOH HOH A . I 5 HOH 6 2006 2006 HOH HOH A . I 5 HOH 7 2007 2007 HOH HOH A . I 5 HOH 8 2008 2008 HOH HOH A . I 5 HOH 9 2009 2009 HOH HOH A . I 5 HOH 10 2010 2010 HOH HOH A . I 5 HOH 11 2011 2011 HOH HOH A . I 5 HOH 12 2012 2012 HOH HOH A . I 5 HOH 13 2013 2013 HOH HOH A . I 5 HOH 14 2014 2014 HOH HOH A . I 5 HOH 15 2015 2015 HOH HOH A . I 5 HOH 16 2016 2016 HOH HOH A . I 5 HOH 17 2017 2017 HOH HOH A . I 5 HOH 18 2018 2018 HOH HOH A . I 5 HOH 19 2019 2019 HOH HOH A . I 5 HOH 20 2020 2020 HOH HOH A . I 5 HOH 21 2021 2021 HOH HOH A . I 5 HOH 22 2022 2022 HOH HOH A . I 5 HOH 23 2023 2023 HOH HOH A . I 5 HOH 24 2024 2024 HOH HOH A . I 5 HOH 25 2025 2025 HOH HOH A . I 5 HOH 26 2026 2026 HOH HOH A . I 5 HOH 27 2027 2027 HOH HOH A . I 5 HOH 28 2028 2028 HOH HOH A . I 5 HOH 29 2029 2029 HOH HOH A . I 5 HOH 30 2030 2030 HOH HOH A . I 5 HOH 31 2031 2031 HOH HOH A . I 5 HOH 32 2032 2032 HOH HOH A . I 5 HOH 33 2033 2033 HOH HOH A . I 5 HOH 34 2034 2034 HOH HOH A . I 5 HOH 35 2035 2035 HOH HOH A . I 5 HOH 36 2036 2036 HOH HOH A . I 5 HOH 37 2037 2037 HOH HOH A . I 5 HOH 38 2038 2038 HOH HOH A . I 5 HOH 39 2039 2039 HOH HOH A . I 5 HOH 40 2040 2040 HOH HOH A . I 5 HOH 41 2041 2041 HOH HOH A . I 5 HOH 42 2042 2042 HOH HOH A . I 5 HOH 43 2043 2043 HOH HOH A . I 5 HOH 44 2044 2044 HOH HOH A . I 5 HOH 45 2045 2045 HOH HOH A . I 5 HOH 46 2046 2046 HOH HOH A . I 5 HOH 47 2047 2047 HOH HOH A . I 5 HOH 48 2048 2048 HOH HOH A . I 5 HOH 49 2049 2049 HOH HOH A . I 5 HOH 50 2050 2050 HOH HOH A . I 5 HOH 51 2051 2051 HOH HOH A . I 5 HOH 52 2052 2052 HOH HOH A . I 5 HOH 53 2053 2053 HOH HOH A . I 5 HOH 54 2054 2054 HOH HOH A . I 5 HOH 55 2055 2055 HOH HOH A . I 5 HOH 56 2056 2056 HOH HOH A . I 5 HOH 57 2057 2057 HOH HOH A . I 5 HOH 58 2058 2058 HOH HOH A . I 5 HOH 59 2059 2059 HOH HOH A . I 5 HOH 60 2060 2060 HOH HOH A . I 5 HOH 61 2061 2061 HOH HOH A . I 5 HOH 62 2062 2062 HOH HOH A . I 5 HOH 63 2063 2063 HOH HOH A . I 5 HOH 64 2064 2064 HOH HOH A . I 5 HOH 65 2065 2065 HOH HOH A . I 5 HOH 66 2066 2066 HOH HOH A . I 5 HOH 67 2067 2067 HOH HOH A . I 5 HOH 68 2068 2068 HOH HOH A . I 5 HOH 69 2069 2069 HOH HOH A . I 5 HOH 70 2070 2070 HOH HOH A . I 5 HOH 71 2071 2071 HOH HOH A . I 5 HOH 72 2072 2072 HOH HOH A . I 5 HOH 73 2073 2073 HOH HOH A . I 5 HOH 74 2074 2074 HOH HOH A . I 5 HOH 75 2075 2075 HOH HOH A . I 5 HOH 76 2076 2076 HOH HOH A . I 5 HOH 77 2077 2077 HOH HOH A . J 5 HOH 1 2001 2001 HOH HOH B . J 5 HOH 2 2002 2002 HOH HOH B . J 5 HOH 3 2003 2003 HOH HOH B . J 5 HOH 4 2004 2004 HOH HOH B . J 5 HOH 5 2005 2005 HOH HOH B . J 5 HOH 6 2006 2006 HOH HOH B . J 5 HOH 7 2007 2007 HOH HOH B . J 5 HOH 8 2008 2008 HOH HOH B . J 5 HOH 9 2009 2009 HOH HOH B . J 5 HOH 10 2010 2010 HOH HOH B . J 5 HOH 11 2011 2011 HOH HOH B . J 5 HOH 12 2012 2012 HOH HOH B . J 5 HOH 13 2013 2013 HOH HOH B . J 5 HOH 14 2014 2014 HOH HOH B . J 5 HOH 15 2015 2015 HOH HOH B . J 5 HOH 16 2016 2016 HOH HOH B . J 5 HOH 17 2017 2017 HOH HOH B . J 5 HOH 18 2018 2018 HOH HOH B . J 5 HOH 19 2019 2019 HOH HOH B . J 5 HOH 20 2020 2020 HOH HOH B . J 5 HOH 21 2021 2021 HOH HOH B . J 5 HOH 22 2022 2022 HOH HOH B . J 5 HOH 23 2023 2023 HOH HOH B . J 5 HOH 24 2024 2024 HOH HOH B . J 5 HOH 25 2025 2025 HOH HOH B . J 5 HOH 26 2026 2026 HOH HOH B . J 5 HOH 27 2027 2027 HOH HOH B . J 5 HOH 28 2028 2028 HOH HOH B . J 5 HOH 29 2029 2029 HOH HOH B . J 5 HOH 30 2030 2030 HOH HOH B . J 5 HOH 31 2031 2031 HOH HOH B . J 5 HOH 32 2032 2032 HOH HOH B . J 5 HOH 33 2033 2033 HOH HOH B . J 5 HOH 34 2034 2034 HOH HOH B . J 5 HOH 35 2035 2035 HOH HOH B . J 5 HOH 36 2036 2036 HOH HOH B . J 5 HOH 37 2037 2037 HOH HOH B . J 5 HOH 38 2038 2038 HOH HOH B . J 5 HOH 39 2039 2039 HOH HOH B . J 5 HOH 40 2040 2040 HOH HOH B . J 5 HOH 41 2041 2041 HOH HOH B . J 5 HOH 42 2042 2042 HOH HOH B . J 5 HOH 43 2043 2043 HOH HOH B . J 5 HOH 44 2044 2044 HOH HOH B . J 5 HOH 45 2045 2045 HOH HOH B . J 5 HOH 46 2046 2046 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SHARP phasing . ? 4 # _cell.entry_id 2CKL _cell.length_a 120.046 _cell.length_b 120.046 _cell.length_c 27.096 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CKL _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 # _exptl.entry_id 2CKL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.4 _exptl_crystal.density_percent_sol 48.5 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '10% PEG3350, 0.1M NAI, 0.05M BIS-TRIS-PROPANE PH7.5, pH 7.50' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2004-06-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength 0.934 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2CKL _reflns.observed_criterion_sigma_I 1.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.000 _reflns.number_obs 15568 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.11000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 5.9000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.300 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.11 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.73000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.000 _reflns_shell.pdbx_redundancy 9.60 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2CKL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 14759 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.181 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.213 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 781 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.B_iso_mean 41.45 _refine.aniso_B[1][1] 0.30000 _refine.aniso_B[2][2] 0.30000 _refine.aniso_B[3][3] -0.46000 _refine.aniso_B[1][2] 0.15000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.167 _refine.pdbx_overall_ESU_R_Free 0.147 _refine.overall_SU_ML 0.106 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.275 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1562 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 123 _refine_hist.number_atoms_total 1691 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 1590 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.565 1.988 ? 2143 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.150 5.000 ? 191 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.600 22.812 ? 64 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.662 15.000 ? 310 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.834 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.105 0.200 ? 251 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1137 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.208 0.200 ? 802 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 1120 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.141 0.200 ? 114 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.169 0.200 ? 28 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.153 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.896 1.500 ? 981 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.481 2.000 ? 1590 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.304 3.000 ? 652 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.550 4.500 ? 553 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.05 _refine_ls_shell.number_reflns_R_work 1065 _refine_ls_shell.R_factor_R_work 0.2070 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3170 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2CKL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2CKL _struct.title 'Ring1b-Bmi1 E3 catalytic domain structure' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CKL _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;BMI1, LIGASE, RING1B, POLYCOMB, E3-LIGASE, NUCLEAR PROTEIN, CHROMOSOMAL PROTEIN, TRANSCRIPTION REGULATION, METAL-BINDING, PROTO-ONCOGENE, CHROMATIN REGULATOR, UBL CONJUGATION PATHWAY, REPRESSOR, ZINC-FINGER, RING DOMAIN, TRANSCRIPTION, TRANSCRIPTION REGULATION COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP PCGF4_MOUSE 1 ? ? P25916 ? 2 PDB 2CKL 2 ? ? 2CKL ? 3 UNP RING2_MOUSE 2 ? ? Q9CQJ4 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2CKL A 1 ? 108 ? P25916 1 ? 108 ? 1 108 2 2 2CKL B 1 ? 6 ? 2CKL -5 ? 0 ? -5 0 3 3 2CKL B 7 ? 165 ? Q9CQJ4 1 ? 159 ? 1 159 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 9 ? ASN A 13 ? ILE A 9 ASN A 13 1 ? 5 HELX_P HELX_P2 2 PRO A 14 ? LEU A 16 ? PRO A 14 LEU A 16 5 ? 3 HELX_P HELX_P3 3 LYS A 40 ? GLU A 48 ? LYS A 40 GLU A 48 1 ? 9 HELX_P HELX_P4 4 ARG A 64 ? LEU A 67 ? ARG A 64 LEU A 67 5 ? 4 HELX_P HELX_P5 5 ASP A 72 ? VAL A 83 ? ASP A 72 VAL A 83 1 ? 12 HELX_P HELX_P6 6 GLY A 85 ? HIS A 101 ? GLY A 85 HIS A 101 1 ? 17 HELX_P HELX_P7 7 SER B 26 ? ARG B 32 ? SER B 20 ARG B 26 1 ? 7 HELX_P HELX_P8 8 LEU B 51 ? MET B 56 ? LEU B 45 MET B 50 1 ? 6 HELX_P HELX_P9 9 ALA B 79 ? SER B 88 ? ALA B 73 SER B 82 1 ? 10 HELX_P HELX_P10 10 SER B 102 ? ARG B 104 ? SER B 96 ARG B 98 5 ? 3 HELX_P HELX_P11 11 ASP B 109 ? TYR B 120 ? ASP B 103 TYR B 114 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 18 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 18 A ZN 1104 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc2 metalc ? ? A CYS 21 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 21 A ZN 1104 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc3 metalc ? ? A CYS 34 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 34 A ZN 1105 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc4 metalc ? ? A HIS 36 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 36 A ZN 1105 1_555 ? ? ? ? ? ? ? 1.990 ? ? metalc5 metalc ? ? A CYS 39 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 39 A ZN 1104 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc6 metalc ? ? A CYS 42 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 42 A ZN 1104 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc7 metalc ? ? A CYS 53 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 53 A ZN 1105 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc8 metalc ? ? A CYS 56 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 56 A ZN 1105 1_555 ? ? ? ? ? ? ? 2.328 ? ? metalc9 metalc ? ? B CYS 57 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 51 B ZN 1116 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc10 metalc ? ? B CYS 60 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 54 B ZN 1116 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc11 metalc ? ? B CYS 73 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 67 B ZN 1115 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc12 metalc ? ? B HIS 75 ND1 ? ? ? 1_555 F ZN . ZN ? ? B HIS 69 B ZN 1115 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc13 metalc ? ? B CYS 78 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 72 B ZN 1116 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc14 metalc ? ? B CYS 81 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 75 B ZN 1116 1_555 ? ? ? ? ? ? ? 2.519 ? ? metalc15 metalc ? ? B CYS 93 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 87 B ZN 1115 1_555 ? ? ? ? ? ? ? 2.421 ? ? metalc16 metalc ? ? B CYS 96 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 90 B ZN 1115 1_555 ? ? ? ? ? ? ? 2.376 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 18 ? A CYS 18 ? 1_555 ZN ? C ZN . ? A ZN 1104 ? 1_555 SG ? A CYS 21 ? A CYS 21 ? 1_555 109.4 ? 2 SG ? A CYS 18 ? A CYS 18 ? 1_555 ZN ? C ZN . ? A ZN 1104 ? 1_555 SG ? A CYS 39 ? A CYS 39 ? 1_555 105.8 ? 3 SG ? A CYS 21 ? A CYS 21 ? 1_555 ZN ? C ZN . ? A ZN 1104 ? 1_555 SG ? A CYS 39 ? A CYS 39 ? 1_555 104.9 ? 4 SG ? A CYS 18 ? A CYS 18 ? 1_555 ZN ? C ZN . ? A ZN 1104 ? 1_555 SG ? A CYS 42 ? A CYS 42 ? 1_555 113.4 ? 5 SG ? A CYS 21 ? A CYS 21 ? 1_555 ZN ? C ZN . ? A ZN 1104 ? 1_555 SG ? A CYS 42 ? A CYS 42 ? 1_555 110.9 ? 6 SG ? A CYS 39 ? A CYS 39 ? 1_555 ZN ? C ZN . ? A ZN 1104 ? 1_555 SG ? A CYS 42 ? A CYS 42 ? 1_555 112.0 ? 7 SG ? A CYS 34 ? A CYS 34 ? 1_555 ZN ? D ZN . ? A ZN 1105 ? 1_555 ND1 ? A HIS 36 ? A HIS 36 ? 1_555 106.0 ? 8 SG ? A CYS 34 ? A CYS 34 ? 1_555 ZN ? D ZN . ? A ZN 1105 ? 1_555 SG ? A CYS 53 ? A CYS 53 ? 1_555 109.9 ? 9 ND1 ? A HIS 36 ? A HIS 36 ? 1_555 ZN ? D ZN . ? A ZN 1105 ? 1_555 SG ? A CYS 53 ? A CYS 53 ? 1_555 108.7 ? 10 SG ? A CYS 34 ? A CYS 34 ? 1_555 ZN ? D ZN . ? A ZN 1105 ? 1_555 SG ? A CYS 56 ? A CYS 56 ? 1_555 109.8 ? 11 ND1 ? A HIS 36 ? A HIS 36 ? 1_555 ZN ? D ZN . ? A ZN 1105 ? 1_555 SG ? A CYS 56 ? A CYS 56 ? 1_555 111.0 ? 12 SG ? A CYS 53 ? A CYS 53 ? 1_555 ZN ? D ZN . ? A ZN 1105 ? 1_555 SG ? A CYS 56 ? A CYS 56 ? 1_555 111.3 ? 13 SG ? B CYS 57 ? B CYS 51 ? 1_555 ZN ? G ZN . ? B ZN 1116 ? 1_555 SG ? B CYS 60 ? B CYS 54 ? 1_555 110.7 ? 14 SG ? B CYS 57 ? B CYS 51 ? 1_555 ZN ? G ZN . ? B ZN 1116 ? 1_555 SG ? B CYS 78 ? B CYS 72 ? 1_555 109.8 ? 15 SG ? B CYS 60 ? B CYS 54 ? 1_555 ZN ? G ZN . ? B ZN 1116 ? 1_555 SG ? B CYS 78 ? B CYS 72 ? 1_555 106.6 ? 16 SG ? B CYS 57 ? B CYS 51 ? 1_555 ZN ? G ZN . ? B ZN 1116 ? 1_555 SG ? B CYS 81 ? B CYS 75 ? 1_555 113.2 ? 17 SG ? B CYS 60 ? B CYS 54 ? 1_555 ZN ? G ZN . ? B ZN 1116 ? 1_555 SG ? B CYS 81 ? B CYS 75 ? 1_555 108.1 ? 18 SG ? B CYS 78 ? B CYS 72 ? 1_555 ZN ? G ZN . ? B ZN 1116 ? 1_555 SG ? B CYS 81 ? B CYS 75 ? 1_555 108.3 ? 19 SG ? B CYS 73 ? B CYS 67 ? 1_555 ZN ? F ZN . ? B ZN 1115 ? 1_555 ND1 ? B HIS 75 ? B HIS 69 ? 1_555 115.9 ? 20 SG ? B CYS 73 ? B CYS 67 ? 1_555 ZN ? F ZN . ? B ZN 1115 ? 1_555 SG ? B CYS 93 ? B CYS 87 ? 1_555 111.3 ? 21 ND1 ? B HIS 75 ? B HIS 69 ? 1_555 ZN ? F ZN . ? B ZN 1115 ? 1_555 SG ? B CYS 93 ? B CYS 87 ? 1_555 104.7 ? 22 SG ? B CYS 73 ? B CYS 67 ? 1_555 ZN ? F ZN . ? B ZN 1115 ? 1_555 SG ? B CYS 96 ? B CYS 90 ? 1_555 100.4 ? 23 ND1 ? B HIS 75 ? B HIS 69 ? 1_555 ZN ? F ZN . ? B ZN 1115 ? 1_555 SG ? B CYS 96 ? B CYS 90 ? 1_555 110.1 ? 24 SG ? B CYS 93 ? B CYS 87 ? 1_555 ZN ? F ZN . ? B ZN 1115 ? 1_555 SG ? B CYS 96 ? B CYS 90 ? 1_555 114.9 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 3 ? BA ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 7 ? LYS A 8 ? ILE A 7 LYS A 8 AA 2 GLU B 43 ? ILE B 44 ? GLU B 37 ILE B 38 AB 1 SER A 37 ? CYS A 39 ? SER A 37 CYS A 39 AB 2 ALA A 28 ? ILE A 31 ? ALA A 28 ILE A 31 AB 3 ILE A 69 ? SER A 71 ? ILE A 69 SER A 71 BA 1 ARG B 76 ? CYS B 78 ? ARG B 70 CYS B 72 BA 2 THR B 67 ? THR B 70 ? THR B 61 THR B 64 BA 3 LEU B 106 ? PRO B 108 ? LEU B 100 PRO B 102 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 7 ? N ILE A 7 O ILE B 44 ? O ILE B 38 AB 1 2 N PHE A 38 ? N PHE A 38 O THR A 29 ? O THR A 29 AB 2 3 N THR A 30 ? N THR A 30 O ARG A 70 ? O ARG A 70 BA 1 2 N PHE B 77 ? N PHE B 71 O MET B 68 ? O MET B 62 BA 2 3 N THR B 69 ? N THR B 63 O ARG B 107 ? O ARG B 101 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A1104' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A1105' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A1106' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN B1115' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN B1116' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 18 ? CYS A 18 . ? 1_555 ? 2 AC1 4 CYS A 21 ? CYS A 21 . ? 1_555 ? 3 AC1 4 CYS A 39 ? CYS A 39 . ? 1_555 ? 4 AC1 4 CYS A 42 ? CYS A 42 . ? 1_555 ? 5 AC2 4 CYS A 34 ? CYS A 34 . ? 1_555 ? 6 AC2 4 HIS A 36 ? HIS A 36 . ? 1_555 ? 7 AC2 4 CYS A 53 ? CYS A 53 . ? 1_555 ? 8 AC2 4 CYS A 56 ? CYS A 56 . ? 1_555 ? 9 AC3 1 ARG A 95 ? ARG A 95 . ? 1_555 ? 10 AC4 4 CYS B 73 ? CYS B 67 . ? 1_555 ? 11 AC4 4 HIS B 75 ? HIS B 69 . ? 1_555 ? 12 AC4 4 CYS B 93 ? CYS B 87 . ? 1_555 ? 13 AC4 4 CYS B 96 ? CYS B 90 . ? 1_555 ? 14 AC5 4 CYS B 57 ? CYS B 51 . ? 1_555 ? 15 AC5 4 CYS B 60 ? CYS B 54 . ? 1_555 ? 16 AC5 4 CYS B 78 ? CYS B 72 . ? 1_555 ? 17 AC5 4 CYS B 81 ? CYS B 75 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 26 ? ? CZ B ARG 26 ? ? NH1 B ARG 26 ? ? 123.57 120.30 3.27 0.50 N 2 1 CA B CYS 72 ? ? CB B CYS 72 ? ? SG B CYS 72 ? ? 121.03 114.20 6.83 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 63 ? ? -145.41 -30.44 2 1 SER B 47 ? ? -68.58 15.32 3 1 GLU B 48 ? ? -131.90 -38.69 4 1 LEU B 55 ? ? 53.39 18.70 5 1 LYS B 85 ? ? -96.03 37.15 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 8.3790 49.1550 0.5930 -0.2657 -0.2271 -0.2327 0.0209 0.0152 -0.0039 3.1434 1.9978 5.2431 -0.9722 1.6053 -1.0558 0.0303 -0.0362 -0.1745 -0.1161 -0.0162 0.1162 0.0418 -0.0749 -0.0140 'X-RAY DIFFRACTION' 2 ? refined -2.8610 42.0620 1.1520 -0.0195 -0.0249 -0.0139 -0.0757 0.0002 0.0012 9.0000 1.0774 1.8037 2.9169 3.0685 0.6782 0.3213 -0.0949 -0.5350 -0.0160 -0.0860 0.1503 0.3320 -0.3235 -0.2353 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 7 ? ? A 101 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 15 ? ? B 38 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 B 44 ? ? B 113 ? ? ? ? # _pdbx_entry_details.entry_id 2CKL _pdbx_entry_details.compound_details ;COMPONENT OF THE POLYCOMB GROUP (PCG) MULTIPROTEIN PRC1 COMPLEX, A COMPLEX REQUIRED TO MAINTAIN THE TRANSCRIPTIONALLY REPRESSIVE STATE OF MANY GENES, INCLUDING HOX GENES, THROUGHOUT DEVELOPMENT. E3 UBIQUITIN LIGASE PROTEIN THAT MEDIATES MONOUBIQUITINATION OF LYS-119 OF HISTONE H2A, THEREBY PLAYING A CENTRAL ROLE IN HISTONE CODE AND GENE REGULATION ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A HIS 2 ? A HIS 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A ALA 104 ? A ALA 104 7 1 Y 1 A ASP 105 ? A ASP 105 8 1 Y 1 A ALA 106 ? A ALA 106 9 1 Y 1 A ALA 107 ? A ALA 107 10 1 Y 1 A ASN 108 ? A ASN 108 11 1 Y 1 B GLY -5 ? B GLY 1 12 1 Y 1 B PRO -4 ? B PRO 2 13 1 Y 1 B LEU -3 ? B LEU 3 14 1 Y 1 B GLY -2 ? B GLY 4 15 1 Y 1 B SER -1 ? B SER 5 16 1 Y 1 B HIS 0 ? B HIS 6 17 1 Y 1 B MET 1 ? B MET 7 18 1 Y 1 B SER 2 ? B SER 8 19 1 Y 1 B GLN 3 ? B GLN 9 20 1 Y 1 B ALA 4 ? B ALA 10 21 1 Y 1 B VAL 5 ? B VAL 11 22 1 Y 1 B GLN 6 ? B GLN 12 23 1 Y 1 B THR 7 ? B THR 13 24 1 Y 1 B ASN 8 ? B ASN 14 25 1 Y 1 B GLY 9 ? B GLY 15 26 1 Y 1 B THR 10 ? B THR 16 27 1 Y 1 B GLN 11 ? B GLN 17 28 1 Y 1 B PRO 12 ? B PRO 18 29 1 Y 1 B LEU 13 ? B LEU 19 30 1 Y 1 B SER 14 ? B SER 20 31 1 Y 1 B VAL 40 ? B VAL 46 32 1 Y 1 B SER 41 ? B SER 47 33 1 Y 1 B PRO 42 ? B PRO 48 34 1 Y 1 B ARG 43 ? B ARG 49 35 1 Y 1 B PRO 115 ? B PRO 121 36 1 Y 1 B SER 116 ? B SER 122 37 1 Y 1 B ARG 117 ? B ARG 123 38 1 Y 1 B ASP 118 ? B ASP 124 39 1 Y 1 B GLU 119 ? B GLU 125 40 1 Y 1 B TYR 120 ? B TYR 126 41 1 Y 1 B GLU 121 ? B GLU 127 42 1 Y 1 B ALA 122 ? B ALA 128 43 1 Y 1 B HIS 123 ? B HIS 129 44 1 Y 1 B GLN 124 ? B GLN 130 45 1 Y 1 B GLU 125 ? B GLU 131 46 1 Y 1 B ARG 126 ? B ARG 132 47 1 Y 1 B VAL 127 ? B VAL 133 48 1 Y 1 B LEU 128 ? B LEU 134 49 1 Y 1 B ALA 129 ? B ALA 135 50 1 Y 1 B ARG 130 ? B ARG 136 51 1 Y 1 B ILE 131 ? B ILE 137 52 1 Y 1 B ASN 132 ? B ASN 138 53 1 Y 1 B LYS 133 ? B LYS 139 54 1 Y 1 B HIS 134 ? B HIS 140 55 1 Y 1 B ASN 135 ? B ASN 141 56 1 Y 1 B ASN 136 ? B ASN 142 57 1 Y 1 B GLN 137 ? B GLN 143 58 1 Y 1 B GLN 138 ? B GLN 144 59 1 Y 1 B ALA 139 ? B ALA 145 60 1 Y 1 B LEU 140 ? B LEU 146 61 1 Y 1 B SER 141 ? B SER 147 62 1 Y 1 B HIS 142 ? B HIS 148 63 1 Y 1 B SER 143 ? B SER 149 64 1 Y 1 B ILE 144 ? B ILE 150 65 1 Y 1 B GLU 145 ? B GLU 151 66 1 Y 1 B GLU 146 ? B GLU 152 67 1 Y 1 B GLY 147 ? B GLY 153 68 1 Y 1 B LEU 148 ? B LEU 154 69 1 Y 1 B LYS 149 ? B LYS 155 70 1 Y 1 B ILE 150 ? B ILE 156 71 1 Y 1 B GLN 151 ? B GLN 157 72 1 Y 1 B ALA 152 ? B ALA 158 73 1 Y 1 B MET 153 ? B MET 159 74 1 Y 1 B ASN 154 ? B ASN 160 75 1 Y 1 B ARG 155 ? B ARG 161 76 1 Y 1 B LEU 156 ? B LEU 162 77 1 Y 1 B GLN 157 ? B GLN 163 78 1 Y 1 B ARG 158 ? B ARG 164 79 1 Y 1 B GLY 159 ? B GLY 165 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 IOD I I N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 ZN ZN ZN N N 392 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 2CKL _atom_sites.fract_transf_matrix[1][1] 0.008330 _atom_sites.fract_transf_matrix[1][2] 0.004809 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009619 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.036906 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O S ZN # loop_