data_2D3Y # _entry.id 2D3Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D3Y pdb_00002d3y 10.2210/pdb2d3y/pdb RCSB RCSB024957 ? ? WWPDB D_1000024957 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.value' 8 4 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D3Y _pdbx_database_status.recvd_initial_deposition_date 2005-10-04 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ttk003000722.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kosaka, H.' 1 'Nakagawa, N.' 2 'Masui, R.' 3 'Kuramitsu, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 373 _citation.page_first 839 _citation.page_last 850 _citation.year 2007 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17870091 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2007.08.022 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kosaka, H.' 1 ? primary 'Hoseki, J.' 2 ? primary 'Nakagawa, N.' 3 ? primary 'Kuramitsu, S.' 4 ? primary 'Masui, R.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'uracil-DNA glycosylase' 24324.139 1 3.2.2.- ? ? ? 2 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 3 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 4 non-polymer syn "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" 308.182 1 ? ? ? ? 5 water nat water 18.015 210 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDREAFVQTLTACRLCPRLVAWREEVVGRKRAFRGEPYWARPVPGFGDPEARILLFGLAPGAHGSNRTGRPFTGDASGAF LYPLLHEAGLSSKPESLPGDDLRLYGVYLTAAVRCAPPKNKPTPEELRACARWTEVELGLLPEVRVYVALGRIALEALLA HFGLRKSAHPFRHGAHYPLPGGRHLLASYHVSRQNTQTGRLTREMFLEVLMEAKRLAGL ; _entity_poly.pdbx_seq_one_letter_code_can ;MDREAFVQTLTACRLCPRLVAWREEVVGRKRAFRGEPYWARPVPGFGDPEARILLFGLAPGAHGSNRTGRPFTGDASGAF LYPLLHEAGLSSKPESLPGDDLRLYGVYLTAAVRCAPPKNKPTPEELRACARWTEVELGLLPEVRVYVALGRIALEALLA HFGLRKSAHPFRHGAHYPLPGGRHLLASYHVSRQNTQTGRLTREMFLEVLMEAKRLAGL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ttk003000722.1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 'IRON/SULFUR CLUSTER' SF4 4 "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" DU 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 ARG n 1 4 GLU n 1 5 ALA n 1 6 PHE n 1 7 VAL n 1 8 GLN n 1 9 THR n 1 10 LEU n 1 11 THR n 1 12 ALA n 1 13 CYS n 1 14 ARG n 1 15 LEU n 1 16 CYS n 1 17 PRO n 1 18 ARG n 1 19 LEU n 1 20 VAL n 1 21 ALA n 1 22 TRP n 1 23 ARG n 1 24 GLU n 1 25 GLU n 1 26 VAL n 1 27 VAL n 1 28 GLY n 1 29 ARG n 1 30 LYS n 1 31 ARG n 1 32 ALA n 1 33 PHE n 1 34 ARG n 1 35 GLY n 1 36 GLU n 1 37 PRO n 1 38 TYR n 1 39 TRP n 1 40 ALA n 1 41 ARG n 1 42 PRO n 1 43 VAL n 1 44 PRO n 1 45 GLY n 1 46 PHE n 1 47 GLY n 1 48 ASP n 1 49 PRO n 1 50 GLU n 1 51 ALA n 1 52 ARG n 1 53 ILE n 1 54 LEU n 1 55 LEU n 1 56 PHE n 1 57 GLY n 1 58 LEU n 1 59 ALA n 1 60 PRO n 1 61 GLY n 1 62 ALA n 1 63 HIS n 1 64 GLY n 1 65 SER n 1 66 ASN n 1 67 ARG n 1 68 THR n 1 69 GLY n 1 70 ARG n 1 71 PRO n 1 72 PHE n 1 73 THR n 1 74 GLY n 1 75 ASP n 1 76 ALA n 1 77 SER n 1 78 GLY n 1 79 ALA n 1 80 PHE n 1 81 LEU n 1 82 TYR n 1 83 PRO n 1 84 LEU n 1 85 LEU n 1 86 HIS n 1 87 GLU n 1 88 ALA n 1 89 GLY n 1 90 LEU n 1 91 SER n 1 92 SER n 1 93 LYS n 1 94 PRO n 1 95 GLU n 1 96 SER n 1 97 LEU n 1 98 PRO n 1 99 GLY n 1 100 ASP n 1 101 ASP n 1 102 LEU n 1 103 ARG n 1 104 LEU n 1 105 TYR n 1 106 GLY n 1 107 VAL n 1 108 TYR n 1 109 LEU n 1 110 THR n 1 111 ALA n 1 112 ALA n 1 113 VAL n 1 114 ARG n 1 115 CYS n 1 116 ALA n 1 117 PRO n 1 118 PRO n 1 119 LYS n 1 120 ASN n 1 121 LYS n 1 122 PRO n 1 123 THR n 1 124 PRO n 1 125 GLU n 1 126 GLU n 1 127 LEU n 1 128 ARG n 1 129 ALA n 1 130 CYS n 1 131 ALA n 1 132 ARG n 1 133 TRP n 1 134 THR n 1 135 GLU n 1 136 VAL n 1 137 GLU n 1 138 LEU n 1 139 GLY n 1 140 LEU n 1 141 LEU n 1 142 PRO n 1 143 GLU n 1 144 VAL n 1 145 ARG n 1 146 VAL n 1 147 TYR n 1 148 VAL n 1 149 ALA n 1 150 LEU n 1 151 GLY n 1 152 ARG n 1 153 ILE n 1 154 ALA n 1 155 LEU n 1 156 GLU n 1 157 ALA n 1 158 LEU n 1 159 LEU n 1 160 ALA n 1 161 HIS n 1 162 PHE n 1 163 GLY n 1 164 LEU n 1 165 ARG n 1 166 LYS n 1 167 SER n 1 168 ALA n 1 169 HIS n 1 170 PRO n 1 171 PHE n 1 172 ARG n 1 173 HIS n 1 174 GLY n 1 175 ALA n 1 176 HIS n 1 177 TYR n 1 178 PRO n 1 179 LEU n 1 180 PRO n 1 181 GLY n 1 182 GLY n 1 183 ARG n 1 184 HIS n 1 185 LEU n 1 186 LEU n 1 187 ALA n 1 188 SER n 1 189 TYR n 1 190 HIS n 1 191 VAL n 1 192 SER n 1 193 ARG n 1 194 GLN n 1 195 ASN n 1 196 THR n 1 197 GLN n 1 198 THR n 1 199 GLY n 1 200 ARG n 1 201 LEU n 1 202 THR n 1 203 ARG n 1 204 GLU n 1 205 MET n 1 206 PHE n 1 207 LEU n 1 208 GLU n 1 209 VAL n 1 210 LEU n 1 211 MET n 1 212 GLU n 1 213 ALA n 1 214 LYS n 1 215 ARG n 1 216 LEU n 1 217 ALA n 1 218 GLY n 1 219 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermus _entity_src_gen.pdbx_gene_src_gene ttUDGB _entity_src_gen.gene_src_species 'Thermus thermophilus' _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 300852 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DU 'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P' 308.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 TRP 39 39 39 TRP TRP A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 CYS 130 130 130 CYS CYS A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 HIS 161 161 161 HIS HIS A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 LYS 166 166 166 LYS LYS A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 HIS 169 169 169 HIS HIS A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 HIS 173 173 173 HIS HIS A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 HIS 176 176 176 HIS HIS A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 HIS 184 184 184 HIS HIS A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 HIS 190 190 190 HIS HIS A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 GLN 194 194 194 GLN GLN A . n A 1 195 ASN 195 195 195 ASN ASN A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 GLN 197 197 197 GLN GLN A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 ARG 200 200 200 ARG ARG A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 THR 202 202 202 THR THR A . n A 1 203 ARG 203 203 203 ARG ARG A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 MET 205 205 205 MET MET A . n A 1 206 PHE 206 206 206 PHE PHE A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 MET 211 211 211 MET MET A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 ARG 215 215 215 ARG ARG A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 LEU 219 219 219 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 222 222 ACT ACT A . C 2 ACT 1 223 223 ACT ACT A . D 3 SF4 1 220 220 SF4 FS4 A . E 4 DU 1 221 221 DU UMP A . F 5 HOH 1 224 1 HOH TIP A . F 5 HOH 2 225 2 HOH TIP A . F 5 HOH 3 226 121 HOH TIP A . F 5 HOH 4 227 167 HOH TIP A . F 5 HOH 5 228 108 HOH TIP A . F 5 HOH 6 229 168 HOH TIP A . F 5 HOH 7 230 3 HOH TIP A . F 5 HOH 8 231 4 HOH TIP A . F 5 HOH 9 232 5 HOH TIP A . F 5 HOH 10 233 109 HOH TIP A . F 5 HOH 11 234 6 HOH TIP A . F 5 HOH 12 235 110 HOH TIP A . F 5 HOH 13 236 7 HOH TIP A . F 5 HOH 14 237 8 HOH TIP A . F 5 HOH 15 238 9 HOH TIP A . F 5 HOH 16 239 171 HOH TIP A . F 5 HOH 17 240 10 HOH TIP A . F 5 HOH 18 241 118 HOH TIP A . F 5 HOH 19 242 11 HOH TIP A . F 5 HOH 20 243 119 HOH TIP A . F 5 HOH 21 244 120 HOH TIP A . F 5 HOH 22 245 12 HOH TIP A . F 5 HOH 23 246 14 HOH TIP A . F 5 HOH 24 247 15 HOH TIP A . F 5 HOH 25 248 17 HOH TIP A . F 5 HOH 26 249 18 HOH TIP A . F 5 HOH 27 250 19 HOH TIP A . F 5 HOH 28 251 20 HOH TIP A . F 5 HOH 29 252 111 HOH TIP A . F 5 HOH 30 253 112 HOH TIP A . F 5 HOH 31 254 122 HOH TIP A . F 5 HOH 32 255 21 HOH TIP A . F 5 HOH 33 256 123 HOH TIP A . F 5 HOH 34 257 124 HOH TIP A . F 5 HOH 35 258 22 HOH TIP A . F 5 HOH 36 259 24 HOH TIP A . F 5 HOH 37 260 25 HOH TIP A . F 5 HOH 38 261 125 HOH TIP A . F 5 HOH 39 262 26 HOH TIP A . F 5 HOH 40 263 126 HOH TIP A . F 5 HOH 41 264 127 HOH TIP A . F 5 HOH 42 265 27 HOH TIP A . F 5 HOH 43 266 28 HOH TIP A . F 5 HOH 44 267 29 HOH TIP A . F 5 HOH 45 268 128 HOH TIP A . F 5 HOH 46 269 30 HOH TIP A . F 5 HOH 47 270 31 HOH TIP A . F 5 HOH 48 271 32 HOH TIP A . F 5 HOH 49 272 113 HOH TIP A . F 5 HOH 50 273 172 HOH TIP A . F 5 HOH 51 274 173 HOH TIP A . F 5 HOH 52 275 129 HOH TIP A . F 5 HOH 53 276 114 HOH TIP A . F 5 HOH 54 277 130 HOH TIP A . F 5 HOH 55 278 33 HOH TIP A . F 5 HOH 56 279 131 HOH TIP A . F 5 HOH 57 280 34 HOH TIP A . F 5 HOH 58 281 115 HOH TIP A . F 5 HOH 59 282 35 HOH TIP A . F 5 HOH 60 283 132 HOH TIP A . F 5 HOH 61 284 36 HOH TIP A . F 5 HOH 62 285 133 HOH TIP A . F 5 HOH 63 286 134 HOH TIP A . F 5 HOH 64 287 37 HOH TIP A . F 5 HOH 65 288 135 HOH TIP A . F 5 HOH 66 289 38 HOH TIP A . F 5 HOH 67 290 136 HOH TIP A . F 5 HOH 68 291 39 HOH TIP A . F 5 HOH 69 292 175 HOH TIP A . F 5 HOH 70 293 137 HOH TIP A . F 5 HOH 71 294 116 HOH TIP A . F 5 HOH 72 295 40 HOH TIP A . F 5 HOH 73 296 41 HOH TIP A . F 5 HOH 74 297 138 HOH TIP A . F 5 HOH 75 298 42 HOH TIP A . F 5 HOH 76 299 43 HOH TIP A . F 5 HOH 77 300 139 HOH TIP A . F 5 HOH 78 301 44 HOH TIP A . F 5 HOH 79 302 140 HOH TIP A . F 5 HOH 80 303 45 HOH TIP A . F 5 HOH 81 304 117 HOH TIP A . F 5 HOH 82 305 46 HOH TIP A . F 5 HOH 83 306 47 HOH TIP A . F 5 HOH 84 307 48 HOH TIP A . F 5 HOH 85 308 176 HOH TIP A . F 5 HOH 86 309 49 HOH TIP A . F 5 HOH 87 310 177 HOH TIP A . F 5 HOH 88 311 50 HOH TIP A . F 5 HOH 89 312 51 HOH TIP A . F 5 HOH 90 313 141 HOH TIP A . F 5 HOH 91 314 142 HOH TIP A . F 5 HOH 92 315 52 HOH TIP A . F 5 HOH 93 316 53 HOH TIP A . F 5 HOH 94 317 143 HOH TIP A . F 5 HOH 95 318 178 HOH TIP A . F 5 HOH 96 319 54 HOH TIP A . F 5 HOH 97 320 144 HOH TIP A . F 5 HOH 98 321 55 HOH TIP A . F 5 HOH 99 322 56 HOH TIP A . F 5 HOH 100 323 57 HOH TIP A . F 5 HOH 101 324 58 HOH TIP A . F 5 HOH 102 325 59 HOH TIP A . F 5 HOH 103 326 61 HOH TIP A . F 5 HOH 104 327 145 HOH TIP A . F 5 HOH 105 328 62 HOH TIP A . F 5 HOH 106 329 63 HOH TIP A . F 5 HOH 107 330 64 HOH TIP A . F 5 HOH 108 331 65 HOH TIP A . F 5 HOH 109 332 146 HOH TIP A . F 5 HOH 110 333 66 HOH TIP A . F 5 HOH 111 334 67 HOH TIP A . F 5 HOH 112 335 68 HOH TIP A . F 5 HOH 113 336 179 HOH TIP A . F 5 HOH 114 337 69 HOH TIP A . F 5 HOH 115 338 147 HOH TIP A . F 5 HOH 116 339 70 HOH TIP A . F 5 HOH 117 340 71 HOH TIP A . F 5 HOH 118 341 72 HOH TIP A . F 5 HOH 119 342 73 HOH TIP A . F 5 HOH 120 343 148 HOH TIP A . F 5 HOH 121 344 74 HOH TIP A . F 5 HOH 122 345 149 HOH TIP A . F 5 HOH 123 346 76 HOH TIP A . F 5 HOH 124 347 77 HOH TIP A . F 5 HOH 125 348 78 HOH TIP A . F 5 HOH 126 349 79 HOH TIP A . F 5 HOH 127 350 80 HOH TIP A . F 5 HOH 128 351 150 HOH TIP A . F 5 HOH 129 352 81 HOH TIP A . F 5 HOH 130 353 82 HOH TIP A . F 5 HOH 131 354 83 HOH TIP A . F 5 HOH 132 355 84 HOH TIP A . F 5 HOH 133 356 85 HOH TIP A . F 5 HOH 134 357 86 HOH TIP A . F 5 HOH 135 358 87 HOH TIP A . F 5 HOH 136 359 88 HOH TIP A . F 5 HOH 137 360 152 HOH TIP A . F 5 HOH 138 361 89 HOH TIP A . F 5 HOH 139 362 90 HOH TIP A . F 5 HOH 140 363 151 HOH TIP A . F 5 HOH 141 364 91 HOH TIP A . F 5 HOH 142 365 153 HOH TIP A . F 5 HOH 143 366 154 HOH TIP A . F 5 HOH 144 367 92 HOH TIP A . F 5 HOH 145 368 93 HOH TIP A . F 5 HOH 146 369 94 HOH TIP A . F 5 HOH 147 370 155 HOH TIP A . F 5 HOH 148 371 95 HOH TIP A . F 5 HOH 149 372 156 HOH TIP A . F 5 HOH 150 373 96 HOH TIP A . F 5 HOH 151 374 97 HOH TIP A . F 5 HOH 152 375 157 HOH TIP A . F 5 HOH 153 376 158 HOH TIP A . F 5 HOH 154 377 159 HOH TIP A . F 5 HOH 155 378 162 HOH TIP A . F 5 HOH 156 379 98 HOH TIP A . F 5 HOH 157 380 99 HOH TIP A . F 5 HOH 158 381 100 HOH TIP A . F 5 HOH 159 382 101 HOH TIP A . F 5 HOH 160 383 102 HOH TIP A . F 5 HOH 161 384 103 HOH TIP A . F 5 HOH 162 385 104 HOH TIP A . F 5 HOH 163 386 105 HOH TIP A . F 5 HOH 164 387 106 HOH TIP A . F 5 HOH 165 388 160 HOH TIP A . F 5 HOH 166 389 161 HOH TIP A . F 5 HOH 167 390 163 HOH TIP A . F 5 HOH 168 391 164 HOH TIP A . F 5 HOH 169 392 165 HOH TIP A . F 5 HOH 170 393 166 HOH TIP A . F 5 HOH 171 394 169 HOH TIP A . F 5 HOH 172 395 170 HOH TIP A . F 5 HOH 173 396 174 HOH TIP A . F 5 HOH 174 397 107 HOH TIP A . F 5 HOH 175 398 180 HOH TIP A . F 5 HOH 176 399 181 HOH TIP A . F 5 HOH 177 400 182 HOH TIP A . F 5 HOH 178 401 183 HOH TIP A . F 5 HOH 179 402 184 HOH TIP A . F 5 HOH 180 403 185 HOH TIP A . F 5 HOH 181 404 186 HOH TIP A . F 5 HOH 182 405 187 HOH TIP A . F 5 HOH 183 406 188 HOH TIP A . F 5 HOH 184 407 189 HOH TIP A . F 5 HOH 185 408 190 HOH TIP A . F 5 HOH 186 409 191 HOH TIP A . F 5 HOH 187 410 192 HOH TIP A . F 5 HOH 188 411 193 HOH TIP A . F 5 HOH 189 412 194 HOH TIP A . F 5 HOH 190 413 195 HOH TIP A . F 5 HOH 191 414 196 HOH TIP A . F 5 HOH 192 415 197 HOH TIP A . F 5 HOH 193 416 198 HOH TIP A . F 5 HOH 194 417 199 HOH TIP A . F 5 HOH 195 418 200 HOH TIP A . F 5 HOH 196 419 201 HOH TIP A . F 5 HOH 197 420 202 HOH TIP A . F 5 HOH 198 421 203 HOH TIP A . F 5 HOH 199 422 204 HOH TIP A . F 5 HOH 200 423 205 HOH TIP A . F 5 HOH 201 424 206 HOH TIP A . F 5 HOH 202 425 207 HOH TIP A . F 5 HOH 203 426 208 HOH TIP A . F 5 HOH 204 427 209 HOH TIP A . F 5 HOH 205 428 210 HOH TIP A . F 5 HOH 206 429 211 HOH TIP A . F 5 HOH 207 430 212 HOH TIP A . F 5 HOH 208 431 213 HOH TIP A . F 5 HOH 209 432 214 HOH TIP A . F 5 HOH 210 433 215 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 MLPHARE phasing . ? 3 CNS refinement 1.1 ? 4 HKL-2000 'data reduction' . ? 5 # _cell.entry_id 2D3Y _cell.length_a 48.180 _cell.length_b 62.350 _cell.length_c 63.040 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2D3Y _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2D3Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.944889 _exptl_crystal.density_percent_sol 36.757332 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.1M MES, 11.5% PEG3350, 0.2M Ammonium Acetate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 1,2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'RIGAKU RAXIS V' 2004-06-15 ? 2 CCD 'ADSC QUANTUM 210' 2004-05-27 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'transparent diamond double crystal' 'SINGLE WAVELENGTH' x-ray 2 1 M 'SI(111)' MAD x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9797 1.0 2 0.97940 1.0 3 0.97280 1.0 4 0.9815 1.0 5 0.9791 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SPRING-8 BEAMLINE BL45XU' SPring-8 BL45XU ? 0.9797 2 SYNCHROTRON 'SPRING-8 BEAMLINE BL44B2' SPring-8 BL44B2 ? 0.97940,0.97280,0.9815,0.9791 # _reflns.entry_id 2D3Y _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 500 _reflns.number_all 27453 _reflns.number_obs 27453 _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.2 _reflns.B_iso_Wilson_estimate 9.9 _reflns.pdbx_redundancy 4.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.297 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 10.2 _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2719 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 2D3Y _refine.ls_d_res_high 1.55 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 27421 _refine.ls_number_reflns_obs 26992 _refine.ls_number_reflns_R_free 2696 _refine.ls_percent_reflns_obs 95.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.186 _refine.ls_R_factor_R_free 0.21 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Restrained _refine.B_iso_mean 11.2 _refine.aniso_B[1][1] -0.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 1.19 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -1.18 _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2D3Y _refine_analyze.Luzzati_coordinate_error_obs 0.16 _refine_analyze.Luzzati_sigma_a_obs 0.05 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.18 _refine_analyze.Luzzati_sigma_a_free 0.11 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1715 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 210 _refine_hist.number_atoms_total 1961 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.0 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 2.73 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.85 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.32 ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.70 ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.58 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.65 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.197 _refine_ls_shell.percent_reflns_obs 95.0 _refine_ls_shell.R_factor_R_free 0.236 _refine_ls_shell.R_factor_R_free_error 0.011 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 471 _refine_ls_shell.number_reflns_obs 4385 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2D3Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2D3Y _struct.title 'Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D3Y _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;base excision repair, uracil-DNA glycosylase, Iron/Sulfer cluster, Thermophile, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, HYDROLASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5SJ65_THET8 _struct_ref.pdbx_db_accession Q5SJ65 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D3Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 219 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5SJ65 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 219 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 219 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 2 ? THR A 11 ? ASP A 2 THR A 11 1 ? 10 HELX_P HELX_P2 2 CYS A 16 ? VAL A 26 ? CYS A 16 VAL A 26 1 ? 11 HELX_P HELX_P3 3 LYS A 30 ? ARG A 34 ? LYS A 30 ARG A 34 5 ? 5 HELX_P HELX_P4 4 GLY A 64 ? GLY A 69 ? GLY A 64 GLY A 69 1 ? 6 HELX_P HELX_P5 5 ASP A 75 ? ALA A 88 ? ASP A 75 ALA A 88 1 ? 14 HELX_P HELX_P6 6 PRO A 117 ? LYS A 121 ? PRO A 117 LYS A 121 5 ? 5 HELX_P HELX_P7 7 THR A 123 ? LEU A 140 ? THR A 123 LEU A 140 1 ? 18 HELX_P HELX_P8 8 GLY A 151 ? GLY A 163 ? GLY A 151 GLY A 163 1 ? 13 HELX_P HELX_P9 9 SER A 192 ? GLY A 199 ? SER A 192 GLY A 199 1 ? 8 HELX_P HELX_P10 10 THR A 202 ? ALA A 217 ? THR A 202 ALA A 217 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 13 SG ? ? ? 1_555 D SF4 . FE1 ? ? A CYS 13 A SF4 220 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc2 metalc ? ? A CYS 16 SG ? ? ? 1_555 D SF4 . FE3 ? ? A CYS 16 A SF4 220 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc3 metalc ? ? A CYS 115 SG ? ? ? 1_555 D SF4 . FE2 ? ? A CYS 115 A SF4 220 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc4 metalc ? ? A CYS 130 SG ? ? ? 1_555 D SF4 . FE4 ? ? A CYS 130 A SF4 220 1_555 ? ? ? ? ? ? ? 2.372 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 13 ? A CYS 13 ? 1_555 FE1 ? D SF4 . ? A SF4 220 ? 1_555 S2 ? D SF4 . ? A SF4 220 ? 1_555 113.4 ? 2 SG ? A CYS 13 ? A CYS 13 ? 1_555 FE1 ? D SF4 . ? A SF4 220 ? 1_555 S3 ? D SF4 . ? A SF4 220 ? 1_555 113.7 ? 3 S2 ? D SF4 . ? A SF4 220 ? 1_555 FE1 ? D SF4 . ? A SF4 220 ? 1_555 S3 ? D SF4 . ? A SF4 220 ? 1_555 103.8 ? 4 SG ? A CYS 13 ? A CYS 13 ? 1_555 FE1 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 115.3 ? 5 S2 ? D SF4 . ? A SF4 220 ? 1_555 FE1 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 104.9 ? 6 S3 ? D SF4 . ? A SF4 220 ? 1_555 FE1 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 104.4 ? 7 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE3 ? D SF4 . ? A SF4 220 ? 1_555 S1 ? D SF4 . ? A SF4 220 ? 1_555 117.7 ? 8 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE3 ? D SF4 . ? A SF4 220 ? 1_555 S2 ? D SF4 . ? A SF4 220 ? 1_555 110.7 ? 9 S1 ? D SF4 . ? A SF4 220 ? 1_555 FE3 ? D SF4 . ? A SF4 220 ? 1_555 S2 ? D SF4 . ? A SF4 220 ? 1_555 103.9 ? 10 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE3 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 114.6 ? 11 S1 ? D SF4 . ? A SF4 220 ? 1_555 FE3 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 104.0 ? 12 S2 ? D SF4 . ? A SF4 220 ? 1_555 FE3 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 104.6 ? 13 SG ? A CYS 115 ? A CYS 115 ? 1_555 FE2 ? D SF4 . ? A SF4 220 ? 1_555 S1 ? D SF4 . ? A SF4 220 ? 1_555 115.5 ? 14 SG ? A CYS 115 ? A CYS 115 ? 1_555 FE2 ? D SF4 . ? A SF4 220 ? 1_555 S3 ? D SF4 . ? A SF4 220 ? 1_555 110.7 ? 15 S1 ? D SF4 . ? A SF4 220 ? 1_555 FE2 ? D SF4 . ? A SF4 220 ? 1_555 S3 ? D SF4 . ? A SF4 220 ? 1_555 104.5 ? 16 SG ? A CYS 115 ? A CYS 115 ? 1_555 FE2 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 116.4 ? 17 S1 ? D SF4 . ? A SF4 220 ? 1_555 FE2 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 104.1 ? 18 S3 ? D SF4 . ? A SF4 220 ? 1_555 FE2 ? D SF4 . ? A SF4 220 ? 1_555 S4 ? D SF4 . ? A SF4 220 ? 1_555 104.3 ? 19 SG ? A CYS 130 ? A CYS 130 ? 1_555 FE4 ? D SF4 . ? A SF4 220 ? 1_555 S1 ? D SF4 . ? A SF4 220 ? 1_555 108.9 ? 20 SG ? A CYS 130 ? A CYS 130 ? 1_555 FE4 ? D SF4 . ? A SF4 220 ? 1_555 S2 ? D SF4 . ? A SF4 220 ? 1_555 115.7 ? 21 S1 ? D SF4 . ? A SF4 220 ? 1_555 FE4 ? D SF4 . ? A SF4 220 ? 1_555 S2 ? D SF4 . ? A SF4 220 ? 1_555 104.7 ? 22 SG ? A CYS 130 ? A CYS 130 ? 1_555 FE4 ? D SF4 . ? A SF4 220 ? 1_555 S3 ? D SF4 . ? A SF4 220 ? 1_555 117.0 ? 23 S1 ? D SF4 . ? A SF4 220 ? 1_555 FE4 ? D SF4 . ? A SF4 220 ? 1_555 S3 ? D SF4 . ? A SF4 220 ? 1_555 104.9 ? 24 S2 ? D SF4 . ? A SF4 220 ? 1_555 FE4 ? D SF4 . ? A SF4 220 ? 1_555 S3 ? D SF4 . ? A SF4 220 ? 1_555 104.5 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 46 ? GLY A 47 ? PHE A 46 GLY A 47 A 2 VAL A 107 ? ALA A 111 ? VAL A 107 ALA A 111 A 3 ILE A 53 ? GLY A 57 ? ILE A 53 GLY A 57 A 4 VAL A 146 ? LEU A 150 ? VAL A 146 LEU A 150 A 5 ARG A 183 ? SER A 188 ? ARG A 183 SER A 188 A 6 HIS A 176 ? LEU A 179 ? HIS A 176 LEU A 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 46 ? N PHE A 46 O LEU A 109 ? O LEU A 109 A 2 3 O THR A 110 ? O THR A 110 N GLY A 57 ? N GLY A 57 A 3 4 N LEU A 54 ? N LEU A 54 O VAL A 148 ? O VAL A 148 A 4 5 N ALA A 149 ? N ALA A 149 O LEU A 186 ? O LEU A 186 A 5 6 O ARG A 183 ? O ARG A 183 N LEU A 179 ? N LEU A 179 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ACT 222 ? 5 'BINDING SITE FOR RESIDUE ACT A 222' AC2 Software A ACT 223 ? 5 'BINDING SITE FOR RESIDUE ACT A 223' AC3 Software A SF4 220 ? 7 'BINDING SITE FOR RESIDUE SF4 A 220' AC4 Software A DU 221 ? 10 'BINDING SITE FOR RESIDUE DU A 221' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ALA A 59 ? ALA A 59 . ? 1_555 ? 2 AC1 5 SER A 65 ? SER A 65 . ? 1_555 ? 3 AC1 5 PRO A 71 ? PRO A 71 . ? 1_555 ? 4 AC1 5 PHE A 72 ? PHE A 72 . ? 1_555 ? 5 AC1 5 HOH F . ? HOH A 230 . ? 1_555 ? 6 AC2 5 GLY A 151 ? GLY A 151 . ? 1_555 ? 7 AC2 5 ARG A 152 ? ARG A 152 . ? 1_555 ? 8 AC2 5 HIS A 190 ? HIS A 190 . ? 1_555 ? 9 AC2 5 ASN A 195 ? ASN A 195 . ? 1_555 ? 10 AC2 5 HOH F . ? HOH A 228 . ? 1_555 ? 11 AC3 7 CYS A 13 ? CYS A 13 . ? 1_555 ? 12 AC3 7 LEU A 15 ? LEU A 15 . ? 1_555 ? 13 AC3 7 CYS A 16 ? CYS A 16 . ? 1_555 ? 14 AC3 7 LEU A 19 ? LEU A 19 . ? 1_555 ? 15 AC3 7 PRO A 42 ? PRO A 42 . ? 1_555 ? 16 AC3 7 CYS A 115 ? CYS A 115 . ? 1_555 ? 17 AC3 7 CYS A 130 ? CYS A 130 . ? 1_555 ? 18 AC4 10 TRP A 22 ? TRP A 22 . ? 3_555 ? 19 AC4 10 GLU A 25 ? GLU A 25 . ? 3_555 ? 20 AC4 10 PHE A 46 ? PHE A 46 . ? 1_555 ? 21 AC4 10 GLY A 47 ? GLY A 47 . ? 1_555 ? 22 AC4 10 ASP A 48 ? ASP A 48 . ? 1_555 ? 23 AC4 10 LEU A 102 ? LEU A 102 . ? 1_555 ? 24 AC4 10 ARG A 103 ? ARG A 103 . ? 1_555 ? 25 AC4 10 LEU A 104 ? LEU A 104 . ? 1_555 ? 26 AC4 10 HOH F . ? HOH A 247 . ? 1_555 ? 27 AC4 10 HOH F . ? HOH A 304 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 14 ? ? -140.74 34.94 2 1 LEU A 58 ? ? -91.69 -62.31 3 1 PHE A 72 ? ? 59.87 -2.77 4 1 LYS A 119 ? ? 57.35 15.75 5 1 VAL A 191 ? ? -91.99 32.00 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 DU OP3 O N N 95 DU P P N N 96 DU OP1 O N N 97 DU OP2 O N N 98 DU "O5'" O N N 99 DU "C5'" C N N 100 DU "C4'" C N R 101 DU "O4'" O N N 102 DU "C3'" C N S 103 DU "O3'" O N N 104 DU "C2'" C N N 105 DU "C1'" C N R 106 DU N1 N N N 107 DU C2 C N N 108 DU O2 O N N 109 DU N3 N N N 110 DU C4 C N N 111 DU O4 O N N 112 DU C5 C N N 113 DU C6 C N N 114 DU HOP3 H N N 115 DU HOP2 H N N 116 DU "H5'" H N N 117 DU "H5''" H N N 118 DU "H4'" H N N 119 DU "H3'" H N N 120 DU "HO3'" H N N 121 DU "H2'" H N N 122 DU "H2''" H N N 123 DU "H1'" H N N 124 DU H3 H N N 125 DU H5 H N N 126 DU H6 H N N 127 GLN N N N N 128 GLN CA C N S 129 GLN C C N N 130 GLN O O N N 131 GLN CB C N N 132 GLN CG C N N 133 GLN CD C N N 134 GLN OE1 O N N 135 GLN NE2 N N N 136 GLN OXT O N N 137 GLN H H N N 138 GLN H2 H N N 139 GLN HA H N N 140 GLN HB2 H N N 141 GLN HB3 H N N 142 GLN HG2 H N N 143 GLN HG3 H N N 144 GLN HE21 H N N 145 GLN HE22 H N N 146 GLN HXT H N N 147 GLU N N N N 148 GLU CA C N S 149 GLU C C N N 150 GLU O O N N 151 GLU CB C N N 152 GLU CG C N N 153 GLU CD C N N 154 GLU OE1 O N N 155 GLU OE2 O N N 156 GLU OXT O N N 157 GLU H H N N 158 GLU H2 H N N 159 GLU HA H N N 160 GLU HB2 H N N 161 GLU HB3 H N N 162 GLU HG2 H N N 163 GLU HG3 H N N 164 GLU HE2 H N N 165 GLU HXT H N N 166 GLY N N N N 167 GLY CA C N N 168 GLY C C N N 169 GLY O O N N 170 GLY OXT O N N 171 GLY H H N N 172 GLY H2 H N N 173 GLY HA2 H N N 174 GLY HA3 H N N 175 GLY HXT H N N 176 HIS N N N N 177 HIS CA C N S 178 HIS C C N N 179 HIS O O N N 180 HIS CB C N N 181 HIS CG C Y N 182 HIS ND1 N Y N 183 HIS CD2 C Y N 184 HIS CE1 C Y N 185 HIS NE2 N Y N 186 HIS OXT O N N 187 HIS H H N N 188 HIS H2 H N N 189 HIS HA H N N 190 HIS HB2 H N N 191 HIS HB3 H N N 192 HIS HD1 H N N 193 HIS HD2 H N N 194 HIS HE1 H N N 195 HIS HE2 H N N 196 HIS HXT H N N 197 HOH O O N N 198 HOH H1 H N N 199 HOH H2 H N N 200 ILE N N N N 201 ILE CA C N S 202 ILE C C N N 203 ILE O O N N 204 ILE CB C N S 205 ILE CG1 C N N 206 ILE CG2 C N N 207 ILE CD1 C N N 208 ILE OXT O N N 209 ILE H H N N 210 ILE H2 H N N 211 ILE HA H N N 212 ILE HB H N N 213 ILE HG12 H N N 214 ILE HG13 H N N 215 ILE HG21 H N N 216 ILE HG22 H N N 217 ILE HG23 H N N 218 ILE HD11 H N N 219 ILE HD12 H N N 220 ILE HD13 H N N 221 ILE HXT H N N 222 LEU N N N N 223 LEU CA C N S 224 LEU C C N N 225 LEU O O N N 226 LEU CB C N N 227 LEU CG C N N 228 LEU CD1 C N N 229 LEU CD2 C N N 230 LEU OXT O N N 231 LEU H H N N 232 LEU H2 H N N 233 LEU HA H N N 234 LEU HB2 H N N 235 LEU HB3 H N N 236 LEU HG H N N 237 LEU HD11 H N N 238 LEU HD12 H N N 239 LEU HD13 H N N 240 LEU HD21 H N N 241 LEU HD22 H N N 242 LEU HD23 H N N 243 LEU HXT H N N 244 LYS N N N N 245 LYS CA C N S 246 LYS C C N N 247 LYS O O N N 248 LYS CB C N N 249 LYS CG C N N 250 LYS CD C N N 251 LYS CE C N N 252 LYS NZ N N N 253 LYS OXT O N N 254 LYS H H N N 255 LYS H2 H N N 256 LYS HA H N N 257 LYS HB2 H N N 258 LYS HB3 H N N 259 LYS HG2 H N N 260 LYS HG3 H N N 261 LYS HD2 H N N 262 LYS HD3 H N N 263 LYS HE2 H N N 264 LYS HE3 H N N 265 LYS HZ1 H N N 266 LYS HZ2 H N N 267 LYS HZ3 H N N 268 LYS HXT H N N 269 MET N N N N 270 MET CA C N S 271 MET C C N N 272 MET O O N N 273 MET CB C N N 274 MET CG C N N 275 MET SD S N N 276 MET CE C N N 277 MET OXT O N N 278 MET H H N N 279 MET H2 H N N 280 MET HA H N N 281 MET HB2 H N N 282 MET HB3 H N N 283 MET HG2 H N N 284 MET HG3 H N N 285 MET HE1 H N N 286 MET HE2 H N N 287 MET HE3 H N N 288 MET HXT H N N 289 PHE N N N N 290 PHE CA C N S 291 PHE C C N N 292 PHE O O N N 293 PHE CB C N N 294 PHE CG C Y N 295 PHE CD1 C Y N 296 PHE CD2 C Y N 297 PHE CE1 C Y N 298 PHE CE2 C Y N 299 PHE CZ C Y N 300 PHE OXT O N N 301 PHE H H N N 302 PHE H2 H N N 303 PHE HA H N N 304 PHE HB2 H N N 305 PHE HB3 H N N 306 PHE HD1 H N N 307 PHE HD2 H N N 308 PHE HE1 H N N 309 PHE HE2 H N N 310 PHE HZ H N N 311 PHE HXT H N N 312 PRO N N N N 313 PRO CA C N S 314 PRO C C N N 315 PRO O O N N 316 PRO CB C N N 317 PRO CG C N N 318 PRO CD C N N 319 PRO OXT O N N 320 PRO H H N N 321 PRO HA H N N 322 PRO HB2 H N N 323 PRO HB3 H N N 324 PRO HG2 H N N 325 PRO HG3 H N N 326 PRO HD2 H N N 327 PRO HD3 H N N 328 PRO HXT H N N 329 SER N N N N 330 SER CA C N S 331 SER C C N N 332 SER O O N N 333 SER CB C N N 334 SER OG O N N 335 SER OXT O N N 336 SER H H N N 337 SER H2 H N N 338 SER HA H N N 339 SER HB2 H N N 340 SER HB3 H N N 341 SER HG H N N 342 SER HXT H N N 343 SF4 FE1 FE N N 344 SF4 FE2 FE N N 345 SF4 FE3 FE N N 346 SF4 FE4 FE N N 347 SF4 S1 S N N 348 SF4 S2 S N N 349 SF4 S3 S N N 350 SF4 S4 S N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 DU OP3 P sing N N 89 DU OP3 HOP3 sing N N 90 DU P OP1 doub N N 91 DU P OP2 sing N N 92 DU P "O5'" sing N N 93 DU OP2 HOP2 sing N N 94 DU "O5'" "C5'" sing N N 95 DU "C5'" "C4'" sing N N 96 DU "C5'" "H5'" sing N N 97 DU "C5'" "H5''" sing N N 98 DU "C4'" "O4'" sing N N 99 DU "C4'" "C3'" sing N N 100 DU "C4'" "H4'" sing N N 101 DU "O4'" "C1'" sing N N 102 DU "C3'" "O3'" sing N N 103 DU "C3'" "C2'" sing N N 104 DU "C3'" "H3'" sing N N 105 DU "O3'" "HO3'" sing N N 106 DU "C2'" "C1'" sing N N 107 DU "C2'" "H2'" sing N N 108 DU "C2'" "H2''" sing N N 109 DU "C1'" N1 sing N N 110 DU "C1'" "H1'" sing N N 111 DU N1 C2 sing N N 112 DU N1 C6 sing N N 113 DU C2 O2 doub N N 114 DU C2 N3 sing N N 115 DU N3 C4 sing N N 116 DU N3 H3 sing N N 117 DU C4 O4 doub N N 118 DU C4 C5 sing N N 119 DU C5 C6 doub N N 120 DU C5 H5 sing N N 121 DU C6 H6 sing N N 122 GLN N CA sing N N 123 GLN N H sing N N 124 GLN N H2 sing N N 125 GLN CA C sing N N 126 GLN CA CB sing N N 127 GLN CA HA sing N N 128 GLN C O doub N N 129 GLN C OXT sing N N 130 GLN CB CG sing N N 131 GLN CB HB2 sing N N 132 GLN CB HB3 sing N N 133 GLN CG CD sing N N 134 GLN CG HG2 sing N N 135 GLN CG HG3 sing N N 136 GLN CD OE1 doub N N 137 GLN CD NE2 sing N N 138 GLN NE2 HE21 sing N N 139 GLN NE2 HE22 sing N N 140 GLN OXT HXT sing N N 141 GLU N CA sing N N 142 GLU N H sing N N 143 GLU N H2 sing N N 144 GLU CA C sing N N 145 GLU CA CB sing N N 146 GLU CA HA sing N N 147 GLU C O doub N N 148 GLU C OXT sing N N 149 GLU CB CG sing N N 150 GLU CB HB2 sing N N 151 GLU CB HB3 sing N N 152 GLU CG CD sing N N 153 GLU CG HG2 sing N N 154 GLU CG HG3 sing N N 155 GLU CD OE1 doub N N 156 GLU CD OE2 sing N N 157 GLU OE2 HE2 sing N N 158 GLU OXT HXT sing N N 159 GLY N CA sing N N 160 GLY N H sing N N 161 GLY N H2 sing N N 162 GLY CA C sing N N 163 GLY CA HA2 sing N N 164 GLY CA HA3 sing N N 165 GLY C O doub N N 166 GLY C OXT sing N N 167 GLY OXT HXT sing N N 168 HIS N CA sing N N 169 HIS N H sing N N 170 HIS N H2 sing N N 171 HIS CA C sing N N 172 HIS CA CB sing N N 173 HIS CA HA sing N N 174 HIS C O doub N N 175 HIS C OXT sing N N 176 HIS CB CG sing N N 177 HIS CB HB2 sing N N 178 HIS CB HB3 sing N N 179 HIS CG ND1 sing Y N 180 HIS CG CD2 doub Y N 181 HIS ND1 CE1 doub Y N 182 HIS ND1 HD1 sing N N 183 HIS CD2 NE2 sing Y N 184 HIS CD2 HD2 sing N N 185 HIS CE1 NE2 sing Y N 186 HIS CE1 HE1 sing N N 187 HIS NE2 HE2 sing N N 188 HIS OXT HXT sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 ILE N CA sing N N 192 ILE N H sing N N 193 ILE N H2 sing N N 194 ILE CA C sing N N 195 ILE CA CB sing N N 196 ILE CA HA sing N N 197 ILE C O doub N N 198 ILE C OXT sing N N 199 ILE CB CG1 sing N N 200 ILE CB CG2 sing N N 201 ILE CB HB sing N N 202 ILE CG1 CD1 sing N N 203 ILE CG1 HG12 sing N N 204 ILE CG1 HG13 sing N N 205 ILE CG2 HG21 sing N N 206 ILE CG2 HG22 sing N N 207 ILE CG2 HG23 sing N N 208 ILE CD1 HD11 sing N N 209 ILE CD1 HD12 sing N N 210 ILE CD1 HD13 sing N N 211 ILE OXT HXT sing N N 212 LEU N CA sing N N 213 LEU N H sing N N 214 LEU N H2 sing N N 215 LEU CA C sing N N 216 LEU CA CB sing N N 217 LEU CA HA sing N N 218 LEU C O doub N N 219 LEU C OXT sing N N 220 LEU CB CG sing N N 221 LEU CB HB2 sing N N 222 LEU CB HB3 sing N N 223 LEU CG CD1 sing N N 224 LEU CG CD2 sing N N 225 LEU CG HG sing N N 226 LEU CD1 HD11 sing N N 227 LEU CD1 HD12 sing N N 228 LEU CD1 HD13 sing N N 229 LEU CD2 HD21 sing N N 230 LEU CD2 HD22 sing N N 231 LEU CD2 HD23 sing N N 232 LEU OXT HXT sing N N 233 LYS N CA sing N N 234 LYS N H sing N N 235 LYS N H2 sing N N 236 LYS CA C sing N N 237 LYS CA CB sing N N 238 LYS CA HA sing N N 239 LYS C O doub N N 240 LYS C OXT sing N N 241 LYS CB CG sing N N 242 LYS CB HB2 sing N N 243 LYS CB HB3 sing N N 244 LYS CG CD sing N N 245 LYS CG HG2 sing N N 246 LYS CG HG3 sing N N 247 LYS CD CE sing N N 248 LYS CD HD2 sing N N 249 LYS CD HD3 sing N N 250 LYS CE NZ sing N N 251 LYS CE HE2 sing N N 252 LYS CE HE3 sing N N 253 LYS NZ HZ1 sing N N 254 LYS NZ HZ2 sing N N 255 LYS NZ HZ3 sing N N 256 LYS OXT HXT sing N N 257 MET N CA sing N N 258 MET N H sing N N 259 MET N H2 sing N N 260 MET CA C sing N N 261 MET CA CB sing N N 262 MET CA HA sing N N 263 MET C O doub N N 264 MET C OXT sing N N 265 MET CB CG sing N N 266 MET CB HB2 sing N N 267 MET CB HB3 sing N N 268 MET CG SD sing N N 269 MET CG HG2 sing N N 270 MET CG HG3 sing N N 271 MET SD CE sing N N 272 MET CE HE1 sing N N 273 MET CE HE2 sing N N 274 MET CE HE3 sing N N 275 MET OXT HXT sing N N 276 PHE N CA sing N N 277 PHE N H sing N N 278 PHE N H2 sing N N 279 PHE CA C sing N N 280 PHE CA CB sing N N 281 PHE CA HA sing N N 282 PHE C O doub N N 283 PHE C OXT sing N N 284 PHE CB CG sing N N 285 PHE CB HB2 sing N N 286 PHE CB HB3 sing N N 287 PHE CG CD1 doub Y N 288 PHE CG CD2 sing Y N 289 PHE CD1 CE1 sing Y N 290 PHE CD1 HD1 sing N N 291 PHE CD2 CE2 doub Y N 292 PHE CD2 HD2 sing N N 293 PHE CE1 CZ doub Y N 294 PHE CE1 HE1 sing N N 295 PHE CE2 CZ sing Y N 296 PHE CE2 HE2 sing N N 297 PHE CZ HZ sing N N 298 PHE OXT HXT sing N N 299 PRO N CA sing N N 300 PRO N CD sing N N 301 PRO N H sing N N 302 PRO CA C sing N N 303 PRO CA CB sing N N 304 PRO CA HA sing N N 305 PRO C O doub N N 306 PRO C OXT sing N N 307 PRO CB CG sing N N 308 PRO CB HB2 sing N N 309 PRO CB HB3 sing N N 310 PRO CG CD sing N N 311 PRO CG HG2 sing N N 312 PRO CG HG3 sing N N 313 PRO CD HD2 sing N N 314 PRO CD HD3 sing N N 315 PRO OXT HXT sing N N 316 SER N CA sing N N 317 SER N H sing N N 318 SER N H2 sing N N 319 SER CA C sing N N 320 SER CA CB sing N N 321 SER CA HA sing N N 322 SER C O doub N N 323 SER C OXT sing N N 324 SER CB OG sing N N 325 SER CB HB2 sing N N 326 SER CB HB3 sing N N 327 SER OG HG sing N N 328 SER OXT HXT sing N N 329 SF4 FE1 S2 sing N N 330 SF4 FE1 S3 sing N N 331 SF4 FE1 S4 sing N N 332 SF4 FE2 S1 sing N N 333 SF4 FE2 S3 sing N N 334 SF4 FE2 S4 sing N N 335 SF4 FE3 S1 sing N N 336 SF4 FE3 S2 sing N N 337 SF4 FE3 S4 sing N N 338 SF4 FE4 S1 sing N N 339 SF4 FE4 S2 sing N N 340 SF4 FE4 S3 sing N N 341 THR N CA sing N N 342 THR N H sing N N 343 THR N H2 sing N N 344 THR CA C sing N N 345 THR CA CB sing N N 346 THR CA HA sing N N 347 THR C O doub N N 348 THR C OXT sing N N 349 THR CB OG1 sing N N 350 THR CB CG2 sing N N 351 THR CB HB sing N N 352 THR OG1 HG1 sing N N 353 THR CG2 HG21 sing N N 354 THR CG2 HG22 sing N N 355 THR CG2 HG23 sing N N 356 THR OXT HXT sing N N 357 TRP N CA sing N N 358 TRP N H sing N N 359 TRP N H2 sing N N 360 TRP CA C sing N N 361 TRP CA CB sing N N 362 TRP CA HA sing N N 363 TRP C O doub N N 364 TRP C OXT sing N N 365 TRP CB CG sing N N 366 TRP CB HB2 sing N N 367 TRP CB HB3 sing N N 368 TRP CG CD1 doub Y N 369 TRP CG CD2 sing Y N 370 TRP CD1 NE1 sing Y N 371 TRP CD1 HD1 sing N N 372 TRP CD2 CE2 doub Y N 373 TRP CD2 CE3 sing Y N 374 TRP NE1 CE2 sing Y N 375 TRP NE1 HE1 sing N N 376 TRP CE2 CZ2 sing Y N 377 TRP CE3 CZ3 doub Y N 378 TRP CE3 HE3 sing N N 379 TRP CZ2 CH2 doub Y N 380 TRP CZ2 HZ2 sing N N 381 TRP CZ3 CH2 sing Y N 382 TRP CZ3 HZ3 sing N N 383 TRP CH2 HH2 sing N N 384 TRP OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # _atom_sites.entry_id 2D3Y _atom_sites.fract_transf_matrix[1][1] 0.020755 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016038 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015863 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O P S # loop_