data_2DGQ # _entry.id 2DGQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DGQ pdb_00002dgq 10.2210/pdb2dgq/pdb RCSB RCSB025398 ? ? WWPDB D_1000025398 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003001437.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DGQ _pdbx_database_status.recvd_initial_deposition_date 2006-03-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abe, C.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the N-terminal RNA binding domain in Bruno-like 6 RNA-binding protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abe, C.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'bruno-like 6, RNA binding protein' _entity.formula_weight 11614.185 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQ KTLPGMNRPIQVKPAASEGRGESGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQ KTLPGMNRPIQVKPAASEGRGESGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003001437.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 VAL n 1 9 PRO n 1 10 MET n 1 11 LYS n 1 12 ASP n 1 13 HIS n 1 14 ASP n 1 15 ALA n 1 16 ILE n 1 17 LYS n 1 18 LEU n 1 19 PHE n 1 20 VAL n 1 21 GLY n 1 22 GLN n 1 23 ILE n 1 24 PRO n 1 25 ARG n 1 26 GLY n 1 27 LEU n 1 28 ASP n 1 29 GLU n 1 30 GLN n 1 31 ASP n 1 32 LEU n 1 33 LYS n 1 34 PRO n 1 35 LEU n 1 36 PHE n 1 37 GLU n 1 38 GLU n 1 39 PHE n 1 40 GLY n 1 41 ARG n 1 42 ILE n 1 43 TYR n 1 44 GLU n 1 45 LEU n 1 46 THR n 1 47 VAL n 1 48 LEU n 1 49 LYS n 1 50 ASP n 1 51 ARG n 1 52 LEU n 1 53 THR n 1 54 GLY n 1 55 LEU n 1 56 HIS n 1 57 LYS n 1 58 GLY n 1 59 CYS n 1 60 ALA n 1 61 PHE n 1 62 LEU n 1 63 THR n 1 64 TYR n 1 65 CYS n 1 66 ALA n 1 67 ARG n 1 68 ASP n 1 69 SER n 1 70 ALA n 1 71 LEU n 1 72 LYS n 1 73 ALA n 1 74 GLN n 1 75 SER n 1 76 ALA n 1 77 LEU n 1 78 HIS n 1 79 GLU n 1 80 GLN n 1 81 LYS n 1 82 THR n 1 83 LEU n 1 84 PRO n 1 85 GLY n 1 86 MET n 1 87 ASN n 1 88 ARG n 1 89 PRO n 1 90 ILE n 1 91 GLN n 1 92 VAL n 1 93 LYS n 1 94 PRO n 1 95 ALA n 1 96 ALA n 1 97 SER n 1 98 GLU n 1 99 GLY n 1 100 ARG n 1 101 GLY n 1 102 GLU n 1 103 SER n 1 104 GLY n 1 105 PRO n 1 106 SER n 1 107 SER n 1 108 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene BRUNOL6 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050801-11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8N607_HUMAN _struct_ref.pdbx_db_accession Q8N607 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 38 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DGQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 102 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8N607 _struct_ref_seq.db_align_beg 38 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 132 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 38 _struct_ref_seq.pdbx_auth_seq_align_end 132 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DGQ GLY A 1 ? UNP Q8N607 ? ? 'cloning artifact' 31 1 1 2DGQ SER A 2 ? UNP Q8N607 ? ? 'cloning artifact' 32 2 1 2DGQ SER A 3 ? UNP Q8N607 ? ? 'cloning artifact' 33 3 1 2DGQ GLY A 4 ? UNP Q8N607 ? ? 'cloning artifact' 34 4 1 2DGQ SER A 5 ? UNP Q8N607 ? ? 'cloning artifact' 35 5 1 2DGQ SER A 6 ? UNP Q8N607 ? ? 'cloning artifact' 36 6 1 2DGQ GLY A 7 ? UNP Q8N607 ? ? 'cloning artifact' 37 7 1 2DGQ SER A 103 ? UNP Q8N607 ? ? 'cloning artifact' 133 8 1 2DGQ GLY A 104 ? UNP Q8N607 ? ? 'cloning artifact' 134 9 1 2DGQ PRO A 105 ? UNP Q8N607 ? ? 'cloning artifact' 135 10 1 2DGQ SER A 106 ? UNP Q8N607 ? ? 'cloning artifact' 136 11 1 2DGQ SER A 107 ? UNP Q8N607 ? ? 'cloning artifact' 137 12 1 2DGQ GLY A 108 ? UNP Q8N607 ? ? 'cloning artifact' 138 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl(pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DGQ _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DGQ _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DGQ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0 'Guntert, P.' 5 refinement CYANA 2.0 'Guntert, P.' 6 # _exptl.entry_id 2DGQ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DGQ _struct.title 'Solution structure of the N-terminal RNA binding domain in Bruno-like 6 RNA-binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DGQ _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 28 ? GLU A 37 ? ASP A 58 GLU A 67 1 ? 10 HELX_P HELX_P2 2 ALA A 66 ? HIS A 78 ? ALA A 96 HIS A 108 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 42 ? LYS A 49 ? ILE A 72 LYS A 79 A 2 HIS A 56 ? TYR A 64 ? HIS A 86 TYR A 94 A 3 LYS A 17 ? VAL A 20 ? LYS A 47 VAL A 50 A 4 VAL A 92 ? PRO A 94 ? VAL A 122 PRO A 124 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 46 ? N THR A 76 O PHE A 61 ? O PHE A 91 A 2 3 O LEU A 62 ? O LEU A 92 N LEU A 18 ? N LEU A 48 A 3 4 N PHE A 19 ? N PHE A 49 O LYS A 93 ? O LYS A 123 # _database_PDB_matrix.entry_id 2DGQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DGQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 31 31 GLY GLY A . n A 1 2 SER 2 32 32 SER SER A . n A 1 3 SER 3 33 33 SER SER A . n A 1 4 GLY 4 34 34 GLY GLY A . n A 1 5 SER 5 35 35 SER SER A . n A 1 6 SER 6 36 36 SER SER A . n A 1 7 GLY 7 37 37 GLY GLY A . n A 1 8 VAL 8 38 38 VAL VAL A . n A 1 9 PRO 9 39 39 PRO PRO A . n A 1 10 MET 10 40 40 MET MET A . n A 1 11 LYS 11 41 41 LYS LYS A . n A 1 12 ASP 12 42 42 ASP ASP A . n A 1 13 HIS 13 43 43 HIS HIS A . n A 1 14 ASP 14 44 44 ASP ASP A . n A 1 15 ALA 15 45 45 ALA ALA A . n A 1 16 ILE 16 46 46 ILE ILE A . n A 1 17 LYS 17 47 47 LYS LYS A . n A 1 18 LEU 18 48 48 LEU LEU A . n A 1 19 PHE 19 49 49 PHE PHE A . n A 1 20 VAL 20 50 50 VAL VAL A . n A 1 21 GLY 21 51 51 GLY GLY A . n A 1 22 GLN 22 52 52 GLN GLN A . n A 1 23 ILE 23 53 53 ILE ILE A . n A 1 24 PRO 24 54 54 PRO PRO A . n A 1 25 ARG 25 55 55 ARG ARG A . n A 1 26 GLY 26 56 56 GLY GLY A . n A 1 27 LEU 27 57 57 LEU LEU A . n A 1 28 ASP 28 58 58 ASP ASP A . n A 1 29 GLU 29 59 59 GLU GLU A . n A 1 30 GLN 30 60 60 GLN GLN A . n A 1 31 ASP 31 61 61 ASP ASP A . n A 1 32 LEU 32 62 62 LEU LEU A . n A 1 33 LYS 33 63 63 LYS LYS A . n A 1 34 PRO 34 64 64 PRO PRO A . n A 1 35 LEU 35 65 65 LEU LEU A . n A 1 36 PHE 36 66 66 PHE PHE A . n A 1 37 GLU 37 67 67 GLU GLU A . n A 1 38 GLU 38 68 68 GLU GLU A . n A 1 39 PHE 39 69 69 PHE PHE A . n A 1 40 GLY 40 70 70 GLY GLY A . n A 1 41 ARG 41 71 71 ARG ARG A . n A 1 42 ILE 42 72 72 ILE ILE A . n A 1 43 TYR 43 73 73 TYR TYR A . n A 1 44 GLU 44 74 74 GLU GLU A . n A 1 45 LEU 45 75 75 LEU LEU A . n A 1 46 THR 46 76 76 THR THR A . n A 1 47 VAL 47 77 77 VAL VAL A . n A 1 48 LEU 48 78 78 LEU LEU A . n A 1 49 LYS 49 79 79 LYS LYS A . n A 1 50 ASP 50 80 80 ASP ASP A . n A 1 51 ARG 51 81 81 ARG ARG A . n A 1 52 LEU 52 82 82 LEU LEU A . n A 1 53 THR 53 83 83 THR THR A . n A 1 54 GLY 54 84 84 GLY GLY A . n A 1 55 LEU 55 85 85 LEU LEU A . n A 1 56 HIS 56 86 86 HIS HIS A . n A 1 57 LYS 57 87 87 LYS LYS A . n A 1 58 GLY 58 88 88 GLY GLY A . n A 1 59 CYS 59 89 89 CYS CYS A . n A 1 60 ALA 60 90 90 ALA ALA A . n A 1 61 PHE 61 91 91 PHE PHE A . n A 1 62 LEU 62 92 92 LEU LEU A . n A 1 63 THR 63 93 93 THR THR A . n A 1 64 TYR 64 94 94 TYR TYR A . n A 1 65 CYS 65 95 95 CYS CYS A . n A 1 66 ALA 66 96 96 ALA ALA A . n A 1 67 ARG 67 97 97 ARG ARG A . n A 1 68 ASP 68 98 98 ASP ASP A . n A 1 69 SER 69 99 99 SER SER A . n A 1 70 ALA 70 100 100 ALA ALA A . n A 1 71 LEU 71 101 101 LEU LEU A . n A 1 72 LYS 72 102 102 LYS LYS A . n A 1 73 ALA 73 103 103 ALA ALA A . n A 1 74 GLN 74 104 104 GLN GLN A . n A 1 75 SER 75 105 105 SER SER A . n A 1 76 ALA 76 106 106 ALA ALA A . n A 1 77 LEU 77 107 107 LEU LEU A . n A 1 78 HIS 78 108 108 HIS HIS A . n A 1 79 GLU 79 109 109 GLU GLU A . n A 1 80 GLN 80 110 110 GLN GLN A . n A 1 81 LYS 81 111 111 LYS LYS A . n A 1 82 THR 82 112 112 THR THR A . n A 1 83 LEU 83 113 113 LEU LEU A . n A 1 84 PRO 84 114 114 PRO PRO A . n A 1 85 GLY 85 115 115 GLY GLY A . n A 1 86 MET 86 116 116 MET MET A . n A 1 87 ASN 87 117 117 ASN ASN A . n A 1 88 ARG 88 118 118 ARG ARG A . n A 1 89 PRO 89 119 119 PRO PRO A . n A 1 90 ILE 90 120 120 ILE ILE A . n A 1 91 GLN 91 121 121 GLN GLN A . n A 1 92 VAL 92 122 122 VAL VAL A . n A 1 93 LYS 93 123 123 LYS LYS A . n A 1 94 PRO 94 124 124 PRO PRO A . n A 1 95 ALA 95 125 125 ALA ALA A . n A 1 96 ALA 96 126 126 ALA ALA A . n A 1 97 SER 97 127 127 SER SER A . n A 1 98 GLU 98 128 128 GLU GLU A . n A 1 99 GLY 99 129 129 GLY GLY A . n A 1 100 ARG 100 130 130 ARG ARG A . n A 1 101 GLY 101 131 131 GLY GLY A . n A 1 102 GLU 102 132 132 GLU GLU A . n A 1 103 SER 103 133 133 SER SER A . n A 1 104 GLY 104 134 134 GLY GLY A . n A 1 105 PRO 105 135 135 PRO PRO A . n A 1 106 SER 106 136 136 SER SER A . n A 1 107 SER 107 137 137 SER SER A . n A 1 108 GLY 108 138 138 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 45 ? ? -59.93 177.62 2 1 PRO A 54 ? ? -69.78 -167.53 3 1 ASP A 80 ? ? -52.57 179.72 4 1 HIS A 86 ? ? -38.92 110.88 5 1 HIS A 108 ? ? -48.63 107.21 6 1 PRO A 124 ? ? -69.83 84.39 7 1 ALA A 125 ? ? -48.03 91.38 8 1 SER A 127 ? ? 34.87 50.08 9 2 GLU A 74 ? ? -170.48 137.45 10 2 HIS A 108 ? ? -42.25 108.35 11 2 GLN A 110 ? ? -131.49 -44.80 12 2 PRO A 124 ? ? -69.72 88.18 13 3 SER A 36 ? ? -35.76 103.53 14 3 PRO A 54 ? ? -69.72 -165.60 15 3 GLU A 74 ? ? -163.99 117.89 16 3 ASP A 80 ? ? -53.43 177.43 17 3 HIS A 86 ? ? -40.19 100.50 18 3 HIS A 108 ? ? -50.54 107.15 19 3 LEU A 113 ? ? -46.79 155.43 20 3 PRO A 124 ? ? -69.76 86.62 21 3 ALA A 125 ? ? -34.73 130.11 22 3 GLU A 128 ? ? -161.47 115.98 23 3 SER A 133 ? ? -38.33 134.66 24 4 PRO A 54 ? ? -69.79 -164.99 25 4 HIS A 86 ? ? -34.85 99.02 26 4 HIS A 108 ? ? -45.69 109.45 27 4 GLN A 110 ? ? -130.78 -44.31 28 4 PRO A 119 ? ? -69.75 -166.32 29 4 PRO A 124 ? ? -69.71 88.15 30 4 ALA A 126 ? ? -37.59 -71.02 31 5 PRO A 54 ? ? -69.70 -173.37 32 5 GLU A 74 ? ? -173.86 136.71 33 5 GLN A 110 ? ? -130.34 -44.94 34 5 PRO A 119 ? ? -69.79 -177.73 35 5 PRO A 124 ? ? -69.77 84.64 36 5 ALA A 125 ? ? -37.12 132.72 37 5 SER A 133 ? ? -168.21 110.11 38 6 PRO A 54 ? ? -69.74 -164.15 39 6 HIS A 86 ? ? -35.32 105.76 40 6 HIS A 108 ? ? -44.64 108.74 41 6 PRO A 124 ? ? -69.84 96.66 42 7 PRO A 54 ? ? -69.75 -164.39 43 7 HIS A 86 ? ? -54.80 100.52 44 7 GLN A 110 ? ? -130.39 -45.04 45 7 LEU A 113 ? ? -42.38 155.81 46 7 PRO A 119 ? ? -69.76 -171.84 47 7 PRO A 124 ? ? -69.80 80.57 48 7 SER A 136 ? ? -59.92 105.22 49 8 SER A 33 ? ? -56.40 170.19 50 8 ALA A 45 ? ? -59.05 -177.48 51 8 PRO A 54 ? ? -69.79 -167.92 52 8 GLU A 74 ? ? -172.05 137.05 53 8 ASP A 80 ? ? -57.35 170.73 54 8 HIS A 108 ? ? -49.79 108.97 55 8 PRO A 119 ? ? -69.74 -176.63 56 8 PRO A 124 ? ? -69.72 84.00 57 8 GLU A 128 ? ? -164.25 112.83 58 9 VAL A 38 ? ? -37.79 134.92 59 9 PRO A 39 ? ? -69.82 98.96 60 9 ALA A 45 ? ? -55.35 179.22 61 9 PRO A 54 ? ? -69.77 -168.45 62 9 ASP A 80 ? ? -59.67 -179.43 63 9 HIS A 108 ? ? -41.45 108.82 64 9 GLN A 110 ? ? -130.89 -44.98 65 9 PRO A 124 ? ? -69.73 82.38 66 9 ALA A 125 ? ? -37.37 95.44 67 9 GLU A 132 ? ? -51.71 173.37 68 10 MET A 40 ? ? -32.00 125.08 69 10 PRO A 54 ? ? -69.80 -168.87 70 10 ASP A 80 ? ? -57.21 -177.47 71 10 CYS A 95 ? ? -35.21 -39.95 72 10 LYS A 102 ? ? -61.84 -70.07 73 10 HIS A 108 ? ? -50.35 102.53 74 10 PRO A 119 ? ? -69.75 -177.95 75 10 PRO A 124 ? ? -69.75 92.11 76 10 ALA A 125 ? ? -39.39 147.16 77 10 SER A 127 ? ? -112.84 79.30 78 11 SER A 36 ? ? -37.50 -31.73 79 11 ALA A 45 ? ? -58.86 178.89 80 11 PRO A 54 ? ? -69.72 -172.74 81 11 HIS A 86 ? ? -56.45 103.41 82 11 PRO A 119 ? ? -69.76 -173.49 83 11 PRO A 124 ? ? -69.79 82.52 84 11 ALA A 125 ? ? -42.67 166.34 85 11 SER A 127 ? ? -164.55 119.10 86 11 PRO A 135 ? ? -69.72 94.40 87 11 SER A 137 ? ? -163.18 112.62 88 12 ALA A 45 ? ? -60.64 -179.80 89 12 PRO A 54 ? ? -69.78 -178.76 90 12 GLU A 74 ? ? -175.20 121.29 91 12 ASP A 80 ? ? -41.44 161.07 92 12 HIS A 108 ? ? -47.41 107.78 93 12 PRO A 119 ? ? -69.77 -179.86 94 12 PRO A 124 ? ? -69.76 88.56 95 12 GLU A 132 ? ? -89.49 42.71 96 12 PRO A 135 ? ? -69.80 -179.27 97 13 PRO A 54 ? ? -69.77 -179.59 98 13 ASP A 80 ? ? -43.37 164.22 99 13 HIS A 86 ? ? -38.36 101.06 100 13 HIS A 108 ? ? -49.59 101.43 101 13 PRO A 119 ? ? -69.76 -175.71 102 13 PRO A 124 ? ? -69.70 81.43 103 13 SER A 127 ? ? -170.54 129.51 104 13 ARG A 130 ? ? -171.44 146.59 105 14 GLU A 74 ? ? -171.83 125.27 106 14 ASP A 80 ? ? -49.86 172.36 107 14 HIS A 86 ? ? -46.67 98.86 108 14 HIS A 108 ? ? -40.08 109.99 109 14 GLN A 110 ? ? -133.80 -44.78 110 14 PRO A 124 ? ? -69.78 85.10 111 14 ARG A 130 ? ? -47.95 103.84 112 15 ALA A 45 ? ? -38.84 157.20 113 15 PRO A 54 ? ? -69.76 -166.35 114 15 ASP A 80 ? ? -46.00 172.46 115 15 HIS A 108 ? ? -50.16 106.47 116 15 PRO A 119 ? ? -69.76 -167.00 117 15 PRO A 124 ? ? -69.77 85.32 118 15 ALA A 125 ? ? -37.99 104.56 119 15 GLU A 132 ? ? -167.02 117.79 120 15 PRO A 135 ? ? -69.75 -179.33 121 16 ALA A 45 ? ? -44.51 165.50 122 16 GLU A 74 ? ? -172.07 124.75 123 16 ARG A 81 ? ? -120.15 -59.94 124 16 HIS A 86 ? ? -43.54 97.78 125 16 HIS A 108 ? ? -47.21 108.35 126 16 GLN A 110 ? ? -130.22 -44.70 127 16 PRO A 124 ? ? -69.74 87.75 128 16 ALA A 125 ? ? -39.89 133.23 129 17 ASP A 44 ? ? -107.16 41.70 130 17 PRO A 54 ? ? -69.81 -167.68 131 17 GLU A 74 ? ? -160.34 115.93 132 17 ASP A 80 ? ? -69.74 -177.39 133 17 HIS A 108 ? ? -48.61 102.02 134 17 PRO A 124 ? ? -69.75 86.62 135 18 ALA A 45 ? ? -50.39 170.59 136 18 ASP A 80 ? ? -62.57 -179.68 137 18 HIS A 86 ? ? -57.05 99.89 138 18 PRO A 124 ? ? -69.73 87.42 139 18 ALA A 125 ? ? -47.98 106.21 140 18 GLU A 128 ? ? -48.60 172.35 141 18 PRO A 135 ? ? -69.79 2.42 142 19 SER A 35 ? ? -39.36 145.28 143 19 VAL A 38 ? ? -39.69 144.38 144 19 PRO A 54 ? ? -69.76 -171.29 145 19 GLU A 74 ? ? -163.35 117.71 146 19 ASP A 80 ? ? -58.24 179.39 147 19 HIS A 86 ? ? -35.75 109.38 148 19 LYS A 102 ? ? -60.27 -70.63 149 19 HIS A 108 ? ? -50.90 98.01 150 19 PRO A 119 ? ? -69.74 -176.90 151 19 PRO A 124 ? ? -69.78 85.41 152 19 SER A 136 ? ? -60.08 90.59 153 20 ALA A 45 ? ? -43.97 162.70 154 20 PRO A 54 ? ? -69.81 -170.67 155 20 ASP A 80 ? ? -59.65 175.09 156 20 HIS A 108 ? ? -49.00 104.97 157 20 PRO A 119 ? ? -69.77 -179.50 158 20 PRO A 124 ? ? -69.72 84.92 159 20 GLU A 128 ? ? -109.93 -61.85 #