data_2DLU # _entry.id 2DLU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DLU pdb_00002dlu 10.2210/pdb2dlu/pdb RCSB RCSB025565 ? ? WWPDB D_1000025565 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso003006830.4 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DLU _pdbx_database_status.recvd_initial_deposition_date 2006-04-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Inoue, K.' 1 'Kurosaki, C.' 2 'Izumi, K.' 3 'Yoshida, M.' 4 'Hayashi, F.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the second PDZ domain of human InaD-like protein' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Inoue, K.' 1 ? primary 'Kurosaki, C.' 2 ? primary 'Izumi, K.' 3 ? primary 'Yoshida, M.' 4 ? primary 'Hayashi, F.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'InaD-like protein' _entity.formula_weight 11142.365 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'PDZ domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Inadl protein, hINADL, Pals1-associated tight junction protein, Protein associated to tight junctions' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPETVCWGHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVA QVLRNCGNSVRMLVARDPAGDISVTSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPETVCWGHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVA QVLRNCGNSVRMLVARDPAGDISVTSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso003006830.4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 GLU n 1 10 THR n 1 11 VAL n 1 12 CYS n 1 13 TRP n 1 14 GLY n 1 15 HIS n 1 16 VAL n 1 17 GLU n 1 18 GLU n 1 19 VAL n 1 20 GLU n 1 21 LEU n 1 22 ILE n 1 23 ASN n 1 24 ASP n 1 25 GLY n 1 26 SER n 1 27 GLY n 1 28 LEU n 1 29 GLY n 1 30 PHE n 1 31 GLY n 1 32 ILE n 1 33 VAL n 1 34 GLY n 1 35 GLY n 1 36 LYS n 1 37 THR n 1 38 SER n 1 39 GLY n 1 40 VAL n 1 41 VAL n 1 42 VAL n 1 43 ARG n 1 44 THR n 1 45 ILE n 1 46 VAL n 1 47 PRO n 1 48 GLY n 1 49 GLY n 1 50 LEU n 1 51 ALA n 1 52 ASP n 1 53 ARG n 1 54 ASP n 1 55 GLY n 1 56 ARG n 1 57 LEU n 1 58 GLN n 1 59 THR n 1 60 GLY n 1 61 ASP n 1 62 HIS n 1 63 ILE n 1 64 LEU n 1 65 LYS n 1 66 ILE n 1 67 GLY n 1 68 GLY n 1 69 THR n 1 70 ASN n 1 71 VAL n 1 72 GLN n 1 73 GLY n 1 74 MET n 1 75 THR n 1 76 SER n 1 77 GLU n 1 78 GLN n 1 79 VAL n 1 80 ALA n 1 81 GLN n 1 82 VAL n 1 83 LEU n 1 84 ARG n 1 85 ASN n 1 86 CYS n 1 87 GLY n 1 88 ASN n 1 89 SER n 1 90 VAL n 1 91 ARG n 1 92 MET n 1 93 LEU n 1 94 VAL n 1 95 ALA n 1 96 ARG n 1 97 ASP n 1 98 PRO n 1 99 ALA n 1 100 GLY n 1 101 ASP n 1 102 ILE n 1 103 SER n 1 104 VAL n 1 105 THR n 1 106 SER n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 SER n 1 111 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'INADL, PATJ' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050627-16 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code INADL_HUMAN _struct_ref.pdbx_db_accession Q8NI35 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 238 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DLU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8NI35 _struct_ref_seq.db_align_beg 238 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 335 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 105 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DLU GLY A 1 ? UNP Q8NI35 ? ? 'cloning artifact' 1 1 1 2DLU SER A 2 ? UNP Q8NI35 ? ? 'cloning artifact' 2 2 1 2DLU SER A 3 ? UNP Q8NI35 ? ? 'cloning artifact' 3 3 1 2DLU GLY A 4 ? UNP Q8NI35 ? ? 'cloning artifact' 4 4 1 2DLU SER A 5 ? UNP Q8NI35 ? ? 'cloning artifact' 5 5 1 2DLU SER A 6 ? UNP Q8NI35 ? ? 'cloning artifact' 6 6 1 2DLU GLY A 7 ? UNP Q8NI35 ? ? 'cloning artifact' 7 7 1 2DLU SER A 106 ? UNP Q8NI35 ? ? 'cloning artifact' 106 8 1 2DLU GLY A 107 ? UNP Q8NI35 ? ? 'cloning artifact' 107 9 1 2DLU PRO A 108 ? UNP Q8NI35 ? ? 'cloning artifact' 108 10 1 2DLU SER A 109 ? UNP Q8NI35 ? ? 'cloning artifact' 109 11 1 2DLU SER A 110 ? UNP Q8NI35 ? ? 'cloning artifact' 110 12 1 2DLU GLY A 111 ? UNP Q8NI35 ? ? 'cloning artifact' 111 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.11mM U-15N, 13C-labeled protein; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model ECA _pdbx_nmr_spectrometer.manufacturer JEOL _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DLU _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DLU _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DLU _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection 'Delta NMR' 4.3.2 JEOL 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.93191 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2DLU _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DLU _struct.title 'Solution structure of the second PDZ domain of human InaD-like protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DLU _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;PDZ domain, InaD-like protein, Inadl protein, hINADL, Pals1-associated tight junction protein, Protein associated to tight junctions, INADL, PATJ, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 50 ? GLY A 55 ? LEU A 50 GLY A 55 1 ? 6 HELX_P HELX_P2 2 THR A 75 ? GLY A 87 ? THR A 75 GLY A 87 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 15 ? ILE A 22 ? HIS A 15 ILE A 22 A 2 SER A 89 ? ARG A 96 ? SER A 89 ARG A 96 A 3 HIS A 62 ? ILE A 66 ? HIS A 62 ILE A 66 B 1 PHE A 30 ? VAL A 33 ? PHE A 30 VAL A 33 B 2 VAL A 41 ? ILE A 45 ? VAL A 41 ILE A 45 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 21 ? N LEU A 21 O VAL A 90 ? O VAL A 90 A 2 3 O LEU A 93 ? O LEU A 93 N LEU A 64 ? N LEU A 64 B 1 2 N GLY A 31 ? N GLY A 31 O THR A 44 ? O THR A 44 # _database_PDB_matrix.entry_id 2DLU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DLU _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 CYS 86 86 86 CYS CYS A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 MET 92 92 92 MET MET A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLY 111 111 111 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 12 ? ? -47.68 103.80 2 1 ASP A 24 ? ? -99.23 38.30 3 1 VAL A 46 ? ? -37.28 129.13 4 1 HIS A 62 ? ? -53.88 101.16 5 1 GLN A 72 ? ? -49.83 92.10 6 2 THR A 10 ? ? -101.08 63.55 7 2 CYS A 12 ? ? -99.80 41.65 8 2 ASP A 24 ? ? -85.84 43.72 9 2 LYS A 36 ? ? -79.30 47.62 10 2 LEU A 50 ? ? -120.61 -60.59 11 2 HIS A 62 ? ? -60.68 99.55 12 2 GLN A 72 ? ? -67.62 85.70 13 2 VAL A 104 ? ? -171.39 141.53 14 3 PRO A 8 ? ? -69.81 2.65 15 3 GLU A 9 ? ? -104.31 41.45 16 3 CYS A 12 ? ? -40.50 104.92 17 3 HIS A 15 ? ? -163.11 119.66 18 3 SER A 26 ? ? -93.50 43.14 19 3 VAL A 46 ? ? -35.54 133.87 20 3 HIS A 62 ? ? -54.28 106.49 21 3 GLN A 72 ? ? -60.24 80.51 22 3 VAL A 104 ? ? -34.05 129.53 23 3 PRO A 108 ? ? -69.78 90.14 24 4 PRO A 8 ? ? -69.79 84.94 25 4 VAL A 46 ? ? -36.79 138.38 26 4 HIS A 62 ? ? -66.36 90.22 27 4 ASN A 88 ? ? -100.47 -64.34 28 4 ALA A 99 ? ? -39.17 150.09 29 5 THR A 10 ? ? -79.95 44.10 30 5 VAL A 11 ? ? -41.81 -70.68 31 5 SER A 26 ? ? 38.30 31.30 32 5 PRO A 98 ? ? -69.74 -170.92 33 6 PRO A 8 ? ? -69.83 -177.21 34 6 VAL A 11 ? ? -94.08 -67.29 35 6 ASP A 24 ? ? -88.60 38.59 36 6 VAL A 46 ? ? -34.42 129.76 37 7 SER A 2 ? ? 38.22 42.05 38 7 SER A 5 ? ? -170.55 144.34 39 7 HIS A 15 ? ? -163.79 107.74 40 7 SER A 26 ? ? -112.72 75.87 41 7 PHE A 30 ? ? -175.03 130.73 42 7 THR A 37 ? ? -133.89 -48.48 43 7 VAL A 46 ? ? -34.83 118.26 44 7 HIS A 62 ? ? -53.67 94.55 45 7 ASP A 97 ? ? 74.25 54.94 46 7 ALA A 99 ? ? -53.85 170.31 47 8 THR A 10 ? ? -44.68 101.57 48 8 CYS A 12 ? ? -46.30 109.42 49 8 HIS A 15 ? ? -163.79 107.92 50 8 ASN A 23 ? ? -65.37 90.02 51 8 LYS A 36 ? ? -130.04 -43.41 52 8 THR A 37 ? ? -130.49 -50.48 53 8 SER A 38 ? ? -56.74 170.43 54 8 VAL A 46 ? ? -34.47 125.18 55 8 LEU A 50 ? ? -99.20 -61.89 56 8 ASP A 97 ? ? 71.58 54.49 57 9 SER A 6 ? ? -44.71 160.66 58 9 PHE A 30 ? ? -171.45 135.21 59 9 THR A 37 ? ? -122.33 -61.58 60 9 SER A 38 ? ? -45.06 168.32 61 9 VAL A 46 ? ? -39.93 130.61 62 9 GLN A 72 ? ? -59.58 78.41 63 9 ARG A 96 ? ? -130.48 -36.45 64 9 PRO A 98 ? ? -69.80 -164.07 65 9 SER A 103 ? ? -56.57 90.45 66 9 THR A 105 ? ? -174.98 147.20 67 10 SER A 5 ? ? -132.36 -54.16 68 10 CYS A 12 ? ? -40.14 104.72 69 10 HIS A 15 ? ? -162.37 113.95 70 10 VAL A 46 ? ? -34.31 127.37 71 10 ASN A 88 ? ? -89.13 -70.97 72 10 ALA A 99 ? ? -35.81 112.91 73 11 SER A 3 ? ? -39.08 132.97 74 11 PHE A 30 ? ? -174.45 138.60 75 11 VAL A 46 ? ? -35.79 124.33 76 11 VAL A 104 ? ? 32.35 51.11 77 11 THR A 105 ? ? -59.39 107.66 78 12 PRO A 8 ? ? -69.79 -176.69 79 12 CYS A 12 ? ? -54.00 109.69 80 12 ASP A 24 ? ? -107.42 42.41 81 12 THR A 37 ? ? -43.40 154.90 82 12 VAL A 46 ? ? -34.09 132.96 83 12 GLN A 72 ? ? -60.43 97.97 84 13 SER A 3 ? ? -38.14 140.60 85 13 PRO A 8 ? ? -69.81 -175.61 86 13 VAL A 11 ? ? -93.29 -64.75 87 13 LYS A 36 ? ? -105.53 79.48 88 13 THR A 37 ? ? 32.25 45.37 89 13 SER A 38 ? ? -173.73 124.52 90 13 VAL A 46 ? ? -34.52 121.26 91 14 SER A 6 ? ? -48.91 158.09 92 14 GLU A 9 ? ? -170.30 131.35 93 14 CYS A 12 ? ? -42.69 104.05 94 14 ASP A 24 ? ? -82.85 41.49 95 14 LYS A 36 ? ? -48.43 177.67 96 14 THR A 37 ? ? -33.96 -39.26 97 14 SER A 38 ? ? -36.86 154.06 98 14 VAL A 46 ? ? -33.96 125.08 99 14 HIS A 62 ? ? -53.96 104.55 100 14 VAL A 104 ? ? -35.74 136.26 101 15 GLU A 9 ? ? -35.54 135.84 102 15 THR A 37 ? ? -54.66 173.07 103 15 VAL A 46 ? ? -34.73 121.70 104 15 LEU A 50 ? ? -122.45 -51.70 105 15 HIS A 62 ? ? -60.24 89.06 106 15 GLN A 72 ? ? -67.51 77.10 107 15 SER A 106 ? ? -165.82 116.04 108 15 SER A 109 ? ? -48.34 169.64 109 16 GLU A 9 ? ? -58.59 101.28 110 16 SER A 26 ? ? 39.56 26.09 111 16 SER A 38 ? ? 37.40 29.41 112 16 VAL A 46 ? ? -37.45 135.00 113 16 ASP A 97 ? ? 74.78 54.28 114 16 ALA A 99 ? ? -52.20 106.56 115 17 CYS A 12 ? ? -41.56 105.68 116 17 HIS A 15 ? ? -174.63 121.89 117 17 ASP A 24 ? ? -87.19 41.46 118 17 LYS A 36 ? ? -65.11 -179.00 119 17 VAL A 46 ? ? -35.05 125.66 120 17 ALA A 99 ? ? -34.45 106.54 121 18 SER A 2 ? ? 38.25 42.09 122 18 LYS A 36 ? ? -87.85 49.50 123 18 SER A 38 ? ? -41.61 97.68 124 18 ASP A 61 ? ? -69.57 -177.41 125 18 LEU A 83 ? ? -39.25 -33.96 126 19 THR A 37 ? ? 32.64 44.37 127 19 VAL A 46 ? ? -35.19 124.95 128 19 HIS A 62 ? ? -57.59 103.37 129 19 GLN A 72 ? ? -58.62 102.03 130 19 PRO A 108 ? ? -69.68 96.38 131 20 THR A 10 ? ? -45.40 102.12 132 20 VAL A 11 ? ? -66.86 -176.02 133 20 ASP A 24 ? ? -95.76 41.53 134 20 ASP A 61 ? ? -59.35 171.52 135 20 ASN A 88 ? ? -107.77 -68.96 136 20 THR A 105 ? ? -174.22 140.92 137 20 PRO A 108 ? ? -69.81 2.82 138 20 SER A 109 ? ? -34.54 104.22 #