data_2DPJ # _entry.id 2DPJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DPJ pdb_00002dpj 10.2210/pdb2dpj/pdb NDB PD0805 ? ? RCSB RCSB025690 ? ? WWPDB D_1000025690 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1T3N . unspecified PDB 2ALZ . unspecified PDB 2DPI . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DPJ _pdbx_database_status.recvd_initial_deposition_date 2006-05-12 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nair, D.T.' 1 'Johnson, R.E.' 2 'Prakash, L.' 3 'Prakash, S.' 4 'Aggarwal, A.K.' 5 # _citation.id primary _citation.title 'Hoogsteen base pair formation promotes synthesis opposite the 1,N(6)-ethenodeoxyadenosine lesion by human DNA polymerase iota.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 13 _citation.page_first 619 _citation.page_last 625 _citation.year 2006 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16819516 _citation.pdbx_database_id_DOI 10.1038/nsmb1118 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nair, D.T.' 1 ? primary 'Johnson, R.E.' 2 ? primary 'Prakash, L.' 3 ? primary 'Prakash, S.' 4 ? primary 'Aggarwal, A.K.' 5 ? # _cell.entry_id 2DPJ _cell.length_a 98.059 _cell.length_b 98.059 _cell.length_c 203.102 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DPJ _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3'" 2091.414 1 ? ? ? ? 2 polymer syn "5'-D(*TP*(EDA)P*GP*GP*GP*TP*CP*CP*T)-3'" 2770.830 1 ? ? ? ? 3 polymer man 'DNA polymerase iota' 47027.344 1 2.7.7.7 ? 'residues 1-420' ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn "THYMIDINE-5'-TRIPHOSPHATE" 482.168 1 ? ? ? ? 6 water nat water 18.015 127 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'RAD30 homolog B, Eta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DA)(DC)(DC)(DOC)' AGGACCC P ? 2 polydeoxyribonucleotide no yes '(DT)(EDA)(DG)(DG)(DG)(DT)(DC)(DC)(DT)' TAGGGTCCT T ? 3 'polypeptide(L)' no no ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DC n 1 7 DOC n 2 1 DT n 2 2 EDA n 2 3 DG n 2 4 DG n 2 5 DG n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DT n 3 1 MET n 3 2 GLU n 3 3 LEU n 3 4 ALA n 3 5 ASP n 3 6 VAL n 3 7 GLY n 3 8 ALA n 3 9 ALA n 3 10 ALA n 3 11 SER n 3 12 SER n 3 13 GLN n 3 14 GLY n 3 15 VAL n 3 16 HIS n 3 17 ASP n 3 18 GLN n 3 19 VAL n 3 20 LEU n 3 21 PRO n 3 22 THR n 3 23 PRO n 3 24 ASN n 3 25 ALA n 3 26 SER n 3 27 SER n 3 28 ARG n 3 29 VAL n 3 30 ILE n 3 31 VAL n 3 32 HIS n 3 33 VAL n 3 34 ASP n 3 35 LEU n 3 36 ASP n 3 37 CYS n 3 38 PHE n 3 39 TYR n 3 40 ALA n 3 41 GLN n 3 42 VAL n 3 43 GLU n 3 44 MET n 3 45 ILE n 3 46 SER n 3 47 ASN n 3 48 PRO n 3 49 GLU n 3 50 LEU n 3 51 LYS n 3 52 ASP n 3 53 LYS n 3 54 PRO n 3 55 LEU n 3 56 GLY n 3 57 VAL n 3 58 GLN n 3 59 GLN n 3 60 LYS n 3 61 TYR n 3 62 LEU n 3 63 VAL n 3 64 VAL n 3 65 THR n 3 66 CYS n 3 67 ASN n 3 68 TYR n 3 69 GLU n 3 70 ALA n 3 71 ARG n 3 72 LYS n 3 73 LEU n 3 74 GLY n 3 75 VAL n 3 76 LYS n 3 77 LYS n 3 78 LEU n 3 79 MET n 3 80 ASN n 3 81 VAL n 3 82 ARG n 3 83 ASP n 3 84 ALA n 3 85 LYS n 3 86 GLU n 3 87 LYS n 3 88 CYS n 3 89 PRO n 3 90 GLN n 3 91 LEU n 3 92 VAL n 3 93 LEU n 3 94 VAL n 3 95 ASN n 3 96 GLY n 3 97 GLU n 3 98 ASP n 3 99 LEU n 3 100 THR n 3 101 ARG n 3 102 TYR n 3 103 ARG n 3 104 GLU n 3 105 MET n 3 106 SER n 3 107 TYR n 3 108 LYS n 3 109 VAL n 3 110 THR n 3 111 GLU n 3 112 LEU n 3 113 LEU n 3 114 GLU n 3 115 GLU n 3 116 PHE n 3 117 SER n 3 118 PRO n 3 119 VAL n 3 120 VAL n 3 121 GLU n 3 122 ARG n 3 123 LEU n 3 124 GLY n 3 125 PHE n 3 126 ASP n 3 127 GLU n 3 128 ASN n 3 129 PHE n 3 130 VAL n 3 131 ASP n 3 132 LEU n 3 133 THR n 3 134 GLU n 3 135 MET n 3 136 VAL n 3 137 GLU n 3 138 LYS n 3 139 ARG n 3 140 LEU n 3 141 GLN n 3 142 GLN n 3 143 LEU n 3 144 GLN n 3 145 SER n 3 146 ASP n 3 147 GLU n 3 148 LEU n 3 149 SER n 3 150 ALA n 3 151 VAL n 3 152 THR n 3 153 VAL n 3 154 SER n 3 155 GLY n 3 156 HIS n 3 157 VAL n 3 158 TYR n 3 159 ASN n 3 160 ASN n 3 161 GLN n 3 162 SER n 3 163 ILE n 3 164 ASN n 3 165 LEU n 3 166 LEU n 3 167 ASP n 3 168 VAL n 3 169 LEU n 3 170 HIS n 3 171 ILE n 3 172 ARG n 3 173 LEU n 3 174 LEU n 3 175 VAL n 3 176 GLY n 3 177 SER n 3 178 GLN n 3 179 ILE n 3 180 ALA n 3 181 ALA n 3 182 GLU n 3 183 MET n 3 184 ARG n 3 185 GLU n 3 186 ALA n 3 187 MET n 3 188 TYR n 3 189 ASN n 3 190 GLN n 3 191 LEU n 3 192 GLY n 3 193 LEU n 3 194 THR n 3 195 GLY n 3 196 CYS n 3 197 ALA n 3 198 GLY n 3 199 VAL n 3 200 ALA n 3 201 SER n 3 202 ASN n 3 203 LYS n 3 204 LEU n 3 205 LEU n 3 206 ALA n 3 207 LYS n 3 208 LEU n 3 209 VAL n 3 210 SER n 3 211 GLY n 3 212 VAL n 3 213 PHE n 3 214 LYS n 3 215 PRO n 3 216 ASN n 3 217 GLN n 3 218 GLN n 3 219 THR n 3 220 VAL n 3 221 LEU n 3 222 LEU n 3 223 PRO n 3 224 GLU n 3 225 SER n 3 226 CYS n 3 227 GLN n 3 228 HIS n 3 229 LEU n 3 230 ILE n 3 231 HIS n 3 232 SER n 3 233 LEU n 3 234 ASN n 3 235 HIS n 3 236 ILE n 3 237 LYS n 3 238 GLU n 3 239 ILE n 3 240 PRO n 3 241 GLY n 3 242 ILE n 3 243 GLY n 3 244 TYR n 3 245 LYS n 3 246 THR n 3 247 ALA n 3 248 LYS n 3 249 CYS n 3 250 LEU n 3 251 GLU n 3 252 ALA n 3 253 LEU n 3 254 GLY n 3 255 ILE n 3 256 ASN n 3 257 SER n 3 258 VAL n 3 259 ARG n 3 260 ASP n 3 261 LEU n 3 262 GLN n 3 263 THR n 3 264 PHE n 3 265 SER n 3 266 PRO n 3 267 LYS n 3 268 ILE n 3 269 LEU n 3 270 GLU n 3 271 LYS n 3 272 GLU n 3 273 LEU n 3 274 GLY n 3 275 ILE n 3 276 SER n 3 277 VAL n 3 278 ALA n 3 279 GLN n 3 280 ARG n 3 281 ILE n 3 282 GLN n 3 283 LYS n 3 284 LEU n 3 285 SER n 3 286 PHE n 3 287 GLY n 3 288 GLU n 3 289 ASP n 3 290 ASN n 3 291 SER n 3 292 PRO n 3 293 VAL n 3 294 ILE n 3 295 LEU n 3 296 SER n 3 297 GLY n 3 298 PRO n 3 299 PRO n 3 300 GLN n 3 301 SER n 3 302 PHE n 3 303 SER n 3 304 GLU n 3 305 GLU n 3 306 ASP n 3 307 SER n 3 308 PHE n 3 309 LYS n 3 310 LYS n 3 311 CYS n 3 312 SER n 3 313 SER n 3 314 GLU n 3 315 VAL n 3 316 GLU n 3 317 ALA n 3 318 LYS n 3 319 ASN n 3 320 LYS n 3 321 ILE n 3 322 GLU n 3 323 GLU n 3 324 LEU n 3 325 LEU n 3 326 ALA n 3 327 SER n 3 328 LEU n 3 329 LEU n 3 330 ASN n 3 331 ARG n 3 332 VAL n 3 333 CYS n 3 334 GLN n 3 335 ASP n 3 336 GLY n 3 337 ARG n 3 338 LYS n 3 339 PRO n 3 340 HIS n 3 341 THR n 3 342 VAL n 3 343 ARG n 3 344 LEU n 3 345 ILE n 3 346 ILE n 3 347 ARG n 3 348 ARG n 3 349 TYR n 3 350 SER n 3 351 SER n 3 352 GLU n 3 353 LYS n 3 354 HIS n 3 355 TYR n 3 356 GLY n 3 357 ARG n 3 358 GLU n 3 359 SER n 3 360 ARG n 3 361 GLN n 3 362 CYS n 3 363 PRO n 3 364 ILE n 3 365 PRO n 3 366 SER n 3 367 HIS n 3 368 VAL n 3 369 ILE n 3 370 GLN n 3 371 LYS n 3 372 LEU n 3 373 GLY n 3 374 THR n 3 375 GLY n 3 376 ASN n 3 377 TYR n 3 378 ASP n 3 379 VAL n 3 380 MET n 3 381 THR n 3 382 PRO n 3 383 MET n 3 384 VAL n 3 385 ASP n 3 386 ILE n 3 387 LEU n 3 388 MET n 3 389 LYS n 3 390 LEU n 3 391 PHE n 3 392 ARG n 3 393 ASN n 3 394 MET n 3 395 VAL n 3 396 ASN n 3 397 VAL n 3 398 LYS n 3 399 MET n 3 400 PRO n 3 401 PHE n 3 402 HIS n 3 403 LEU n 3 404 THR n 3 405 LEU n 3 406 LEU n 3 407 SER n 3 408 VAL n 3 409 CYS n 3 410 PHE n 3 411 CYS n 3 412 ASN n 3 413 LEU n 3 414 LYS n 3 415 ALA n 3 416 LEU n 3 417 ASN n 3 418 THR n 3 419 ALA n 3 420 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ;baker's yeast ; _entity_src_gen.pdbx_host_org_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4932 _entity_src_gen.host_org_genus Saccharomyces _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Bj5464 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBJ941 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POLI_HUMAN Q9UNA4 3 ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; 1 ? 2 PDB 2DPJ 2DPJ 1 ? ? ? 3 PDB 2DPJ 2DPJ 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DPJ A 1 ? 420 ? Q9UNA4 1 ? 420 ? 1 420 2 2 2DPJ P 1 ? 7 ? 2DPJ 867 ? 873 ? 867 873 3 3 2DPJ T 1 ? 9 ? 2DPJ 839 ? 847 ? 839 847 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDA 'DNA linking' n "3-[2-DEOXY-RIBOFURANOSYL]-3H-1,3,4,5A,8-PENTAAZA-AS-INDACENE-5'-MONOPHOSPHATE" ? 'C12 H14 N5 O6 P' 355.243 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TTP non-polymer . "THYMIDINE-5'-TRIPHOSPHATE" ? 'C10 H17 N2 O14 P3' 482.168 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2DPJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 57.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '16% PEG 5K MME, 0.4M Ammonium Sulfate, 0.1M MES buffer, pH 6.5, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 5K MME' ? ? ? 1 2 1 'Ammonium Sulfate' ? ? ? 1 3 1 MES ? ? ? 1 4 1 HOH ? ? ? 1 5 2 'PEG 5K MME' ? ? ? 1 6 2 'Ammonium Sulfate' ? ? ? 1 7 2 MES ? ? ? 1 8 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-07-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2DPJ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.3 _reflns.number_obs 26535 _reflns.number_all ? _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 45.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.5 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.283 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.9 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2DPJ _refine.ls_number_reflns_obs 22903 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.76 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 93.99 _refine.ls_R_factor_obs 0.2412 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23805 _refine.ls_R_factor_R_free 0.277 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.9 _refine.ls_number_reflns_R_free 1964 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.923 _refine.correlation_coeff_Fo_to_Fc_free 0.901 _refine.B_iso_mean 38.591 _refine.aniso_B[1][1] 0.61 _refine.aniso_B[2][2] 0.61 _refine.aniso_B[3][3] -0.91 _refine.aniso_B[1][2] 0.30 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'the structure was refined also with CNS1.1' _refine.pdbx_starting_model 'PDB entry 2ALZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.342 _refine.pdbx_overall_ESU_R_Free 0.256 _refine.overall_SU_ML 0.188 _refine.overall_SU_B 7.707 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2876 _refine_hist.pdbx_number_atoms_nucleic_acid 323 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 127 _refine_hist.number_atoms_total 3357 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 36.76 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.037 0.022 ? 3306 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.865 2.113 ? 4531 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.612 5.000 ? 370 'X-RAY DIFFRACTION' ? r_chiral_restr 0.197 0.200 ? 517 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.016 0.020 ? 2317 'X-RAY DIFFRACTION' ? r_nbd_refined 0.300 0.200 ? 1339 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.218 0.200 ? 170 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.365 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.310 0.200 ? 8 'X-RAY DIFFRACTION' ? r_mcbond_it 1.796 1.500 ? 1860 'X-RAY DIFFRACTION' ? r_mcangle_it 3.143 2.000 ? 2997 'X-RAY DIFFRACTION' ? r_scbond_it 4.307 3.000 ? 1446 'X-RAY DIFFRACTION' ? r_scangle_it 6.179 4.500 ? 1534 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 1527 _refine_ls_shell.R_factor_R_work 0.278 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 121 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2DPJ _struct.title 'structure of hPoli with DNA and dTTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DPJ _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'DNA dependent DNA Polymerase, ethenodA adduct, lesion bypass, dTTP, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS C 37 ? ASN C 47 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 2 PRO C 48 ? LYS C 51 ? PRO A 48 LYS A 51 5 ? 4 HELX_P HELX_P3 3 ASN C 67 ? LEU C 73 ? ASN A 67 LEU A 73 1 ? 7 HELX_P HELX_P4 4 VAL C 81 ? GLU C 86 ? VAL A 81 GLU A 86 1 ? 6 HELX_P HELX_P5 5 LEU C 99 ? SER C 117 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P6 6 LEU C 132 ? LEU C 143 ? LEU A 132 LEU A 143 1 ? 12 HELX_P HELX_P7 7 ASN C 159 ? GLN C 161 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P8 8 ASP C 167 ? GLY C 192 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P9 9 ASN C 202 ? GLY C 211 ? ASN A 202 GLY A 211 1 ? 10 HELX_P HELX_P10 10 LEU C 222 ? GLU C 224 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P11 11 SER C 225 ? LEU C 233 ? SER A 225 LEU A 233 1 ? 9 HELX_P HELX_P12 12 HIS C 235 ? ILE C 239 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P13 13 THR C 246 ? LEU C 253 ? THR A 246 LEU A 253 1 ? 8 HELX_P HELX_P14 14 SER C 257 ? PHE C 264 ? SER A 257 PHE A 264 1 ? 8 HELX_P HELX_P15 15 SER C 265 ? GLU C 270 ? SER A 265 GLU A 270 1 ? 6 HELX_P HELX_P16 16 LEU C 273 ? PHE C 286 ? LEU A 273 PHE A 286 1 ? 14 HELX_P HELX_P17 17 LYS C 318 ? GLY C 336 ? LYS A 318 GLY A 336 1 ? 19 HELX_P HELX_P18 18 PRO C 365 ? SER C 366 ? PRO A 365 SER A 366 5 ? 2 HELX_P HELX_P19 19 VAL C 368 ? GLN C 370 ? VAL A 368 GLN A 370 5 ? 3 HELX_P HELX_P20 20 MET C 380 ? ASP C 385 ? MET A 380 ASP A 385 1 ? 6 HELX_P HELX_P21 21 LEU C 387 ? MET C 388 ? LEU A 387 MET A 388 5 ? 2 HELX_P HELX_P22 22 LEU C 390 ? ARG C 392 ? LEU A 390 ARG A 392 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 6 "O3'" ? ? ? 1_555 A DOC 7 P ? ? P DC 872 P DOC 873 1_555 ? ? ? ? ? ? ? 1.556 ? ? covale2 covale one ? B DT 1 "O3'" ? ? ? 1_555 B EDA 2 OP1 ? ? T DT 839 T EDA 840 1_555 ? ? ? ? ? ? ? 1.778 ? ? covale3 covale both ? B DT 1 "O3'" ? ? ? 1_555 B EDA 2 P ? ? T DT 839 T EDA 840 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale4 covale both ? B EDA 2 "O3'" ? ? ? 1_555 B DG 3 P ? ? T EDA 840 T DG 841 1_555 ? ? ? ? ? ? ? 1.346 ? ? metalc1 metalc ? ? C ASP 34 OD2 ? ? ? 1_555 D MG . MG ? ? A ASP 34 A MG 871 1_555 ? ? ? ? ? ? ? 2.358 ? ? metalc2 metalc ? ? C ASP 34 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 34 A MG 872 1_555 ? ? ? ? ? ? ? 2.646 ? ? metalc3 metalc ? ? C ASP 34 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 34 A MG 872 1_555 ? ? ? ? ? ? ? 3.028 ? ? metalc4 metalc ? ? C LEU 35 O ? ? ? 1_555 D MG . MG ? ? A LEU 35 A MG 871 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc5 metalc ? ? C ASP 126 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 126 A MG 871 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc6 metalc ? ? C GLU 127 OE2 ? ? ? 1_555 E MG . MG ? ? A GLU 127 A MG 872 1_555 ? ? ? ? ? ? ? 2.501 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 F TTP . O1G ? ? A MG 871 A TTP 875 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 F TTP . O2B ? ? A MG 871 A TTP 875 1_555 ? ? ? ? ? ? ? 2.138 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 F TTP . O1A ? ? A MG 871 A TTP 875 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 F TTP . O1A ? ? A MG 872 A TTP 875 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 872 A HOH 932 1_555 ? ? ? ? ? ? ? 2.805 ? ? hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 9 N3 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 9 O4 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 8 N3 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 8 O2 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 8 N4 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 7 N3 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 7 O2 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 7 N4 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 6 N3 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 6 O4 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 5 N1 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 5 O6 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 5 N2 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 4 N1 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 4 O6 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 4 N2 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DOC 7 N3 ? ? ? 1_555 B DG 3 N1 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DOC 7 N4 ? ? ? 1_555 B DG 3 O6 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DOC 7 O2 ? ? ? 1_555 B DG 3 N2 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 120 ? LEU C 123 ? VAL A 120 LEU A 123 A 2 GLU C 127 ? ASP C 131 ? GLU A 127 ASP A 131 A 3 ILE C 30 ? LEU C 35 ? ILE A 30 LEU A 35 A 4 GLY C 195 ? ALA C 200 ? GLY A 195 ALA A 200 A 5 GLN C 218 ? VAL C 220 ? GLN A 218 VAL A 220 A 6 HIS C 156 ? VAL C 157 ? HIS A 156 VAL A 157 B 1 MET C 79 ? ASN C 80 ? MET A 79 ASN A 80 B 2 LEU C 62 ? CYS C 66 ? LEU A 62 CYS A 66 B 3 LEU C 55 ? GLN C 59 ? LEU A 55 GLN A 59 B 4 VAL C 92 ? ASN C 95 ? VAL A 92 ASN A 95 C 1 SER C 301 ? GLU C 305 ? SER A 301 GLU A 305 C 2 SER C 407 ? CYS C 411 ? SER A 407 CYS A 411 C 3 THR C 341 ? ILE C 346 ? THR A 341 ILE A 346 C 4 GLU C 358 ? PRO C 363 ? GLU A 358 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU C 121 ? N GLU A 121 O PHE C 129 ? O PHE A 129 A 2 3 O ASN C 128 ? O ASN A 128 N VAL C 33 ? N VAL A 33 A 3 4 N ASP C 34 ? N ASP A 34 O CYS C 196 ? O CYS A 196 A 4 5 N VAL C 199 ? N VAL A 199 O THR C 219 ? O THR A 219 A 5 6 O GLN C 218 ? O GLN A 218 N HIS C 156 ? N HIS A 156 B 1 2 O MET C 79 ? O MET A 79 N VAL C 63 ? N VAL A 63 B 2 3 O THR C 65 ? O THR A 65 N VAL C 57 ? N VAL A 57 B 3 4 N GLN C 58 ? N GLN A 58 O VAL C 94 ? O VAL A 94 C 1 2 N PHE C 302 ? N PHE A 302 O PHE C 410 ? O PHE A 410 C 2 3 O CYS C 411 ? O CYS A 411 N THR C 341 ? N THR A 341 C 3 4 N ILE C 346 ? N ILE A 346 O GLU C 358 ? O GLU A 358 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 871 ? 5 'BINDING SITE FOR RESIDUE MG A 871' AC2 Software A MG 872 ? 6 'BINDING SITE FOR RESIDUE MG A 872' AC3 Software A TTP 875 ? 22 'BINDING SITE FOR RESIDUE TTP A 875' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP C 34 ? ASP A 34 . ? 1_555 ? 2 AC1 5 LEU C 35 ? LEU A 35 . ? 1_555 ? 3 AC1 5 ASP C 126 ? ASP A 126 . ? 1_555 ? 4 AC1 5 MG E . ? MG A 872 . ? 1_555 ? 5 AC1 5 TTP F . ? TTP A 875 . ? 1_555 ? 6 AC2 6 ASP C 34 ? ASP A 34 . ? 1_555 ? 7 AC2 6 ASP C 126 ? ASP A 126 . ? 1_555 ? 8 AC2 6 GLU C 127 ? GLU A 127 . ? 1_555 ? 9 AC2 6 MG D . ? MG A 871 . ? 1_555 ? 10 AC2 6 TTP F . ? TTP A 875 . ? 1_555 ? 11 AC2 6 HOH I . ? HOH A 932 . ? 1_555 ? 12 AC3 22 ASP C 34 ? ASP A 34 . ? 1_555 ? 13 AC3 22 LEU C 35 ? LEU A 35 . ? 1_555 ? 14 AC3 22 ASP C 36 ? ASP A 36 . ? 1_555 ? 15 AC3 22 CYS C 37 ? CYS A 37 . ? 1_555 ? 16 AC3 22 PHE C 38 ? PHE A 38 . ? 1_555 ? 17 AC3 22 TYR C 39 ? TYR A 39 . ? 1_555 ? 18 AC3 22 VAL C 64 ? VAL A 64 . ? 1_555 ? 19 AC3 22 THR C 65 ? THR A 65 . ? 1_555 ? 20 AC3 22 TYR C 68 ? TYR A 68 . ? 1_555 ? 21 AC3 22 ARG C 71 ? ARG A 71 . ? 1_555 ? 22 AC3 22 LYS C 77 ? LYS A 77 . ? 1_555 ? 23 AC3 22 ASP C 126 ? ASP A 126 . ? 1_555 ? 24 AC3 22 LYS C 214 ? LYS A 214 . ? 1_555 ? 25 AC3 22 MG D . ? MG A 871 . ? 1_555 ? 26 AC3 22 MG E . ? MG A 872 . ? 1_555 ? 27 AC3 22 HOH I . ? HOH A 921 . ? 1_555 ? 28 AC3 22 HOH I . ? HOH A 929 . ? 1_555 ? 29 AC3 22 HOH I . ? HOH A 932 . ? 1_555 ? 30 AC3 22 DOC A 7 ? DOC P 873 . ? 1_555 ? 31 AC3 22 EDA B 2 ? EDA T 840 . ? 1_555 ? 32 AC3 22 DG B 3 ? DG T 841 . ? 1_555 ? 33 AC3 22 HOH H . ? HOH T 903 . ? 1_555 ? # _database_PDB_matrix.entry_id 2DPJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DPJ _atom_sites.fract_transf_matrix[1][1] 0.010198 _atom_sites.fract_transf_matrix[1][2] 0.005888 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011776 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004924 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 867 867 DA A P . n A 1 2 DG 2 868 868 DG G P . n A 1 3 DG 3 869 869 DG G P . n A 1 4 DA 4 870 870 DA A P . n A 1 5 DC 5 871 871 DC C P . n A 1 6 DC 6 872 872 DC C P . n A 1 7 DOC 7 873 873 DOC DOC P . n B 2 1 DT 1 839 839 DT T T . n B 2 2 EDA 2 840 840 EDA EDA T . n B 2 3 DG 3 841 841 DG G T . n B 2 4 DG 4 842 842 DG G T . n B 2 5 DG 5 843 843 DG G T . n B 2 6 DT 6 844 844 DT T T . n B 2 7 DC 7 845 845 DC C T . n B 2 8 DC 8 846 846 DC C T . n B 2 9 DT 9 847 847 DT T T . n C 3 1 MET 1 1 ? ? ? A . n C 3 2 GLU 2 2 ? ? ? A . n C 3 3 LEU 3 3 ? ? ? A . n C 3 4 ALA 4 4 ? ? ? A . n C 3 5 ASP 5 5 ? ? ? A . n C 3 6 VAL 6 6 ? ? ? A . n C 3 7 GLY 7 7 ? ? ? A . n C 3 8 ALA 8 8 ? ? ? A . n C 3 9 ALA 9 9 ? ? ? A . n C 3 10 ALA 10 10 ? ? ? A . n C 3 11 SER 11 11 ? ? ? A . n C 3 12 SER 12 12 ? ? ? A . n C 3 13 GLN 13 13 ? ? ? A . n C 3 14 GLY 14 14 ? ? ? A . n C 3 15 VAL 15 15 ? ? ? A . n C 3 16 HIS 16 16 ? ? ? A . n C 3 17 ASP 17 17 ? ? ? A . n C 3 18 GLN 18 18 ? ? ? A . n C 3 19 VAL 19 19 ? ? ? A . n C 3 20 LEU 20 20 ? ? ? A . n C 3 21 PRO 21 21 ? ? ? A . n C 3 22 THR 22 22 ? ? ? A . n C 3 23 PRO 23 23 ? ? ? A . n C 3 24 ASN 24 24 ? ? ? A . n C 3 25 ALA 25 25 25 ALA ALA A . n C 3 26 SER 26 26 26 SER SER A . n C 3 27 SER 27 27 27 SER SER A . n C 3 28 ARG 28 28 28 ARG ARG A . n C 3 29 VAL 29 29 29 VAL VAL A . n C 3 30 ILE 30 30 30 ILE ILE A . n C 3 31 VAL 31 31 31 VAL VAL A . n C 3 32 HIS 32 32 32 HIS HIS A . n C 3 33 VAL 33 33 33 VAL VAL A . n C 3 34 ASP 34 34 34 ASP ASP A . n C 3 35 LEU 35 35 35 LEU LEU A . n C 3 36 ASP 36 36 36 ASP ASP A . n C 3 37 CYS 37 37 37 CYS CYS A . n C 3 38 PHE 38 38 38 PHE PHE A . n C 3 39 TYR 39 39 39 TYR TYR A . n C 3 40 ALA 40 40 40 ALA ALA A . n C 3 41 GLN 41 41 41 GLN GLN A . n C 3 42 VAL 42 42 42 VAL VAL A . n C 3 43 GLU 43 43 43 GLU GLU A . n C 3 44 MET 44 44 44 MET MET A . n C 3 45 ILE 45 45 45 ILE ILE A . n C 3 46 SER 46 46 46 SER SER A . n C 3 47 ASN 47 47 47 ASN ASN A . n C 3 48 PRO 48 48 48 PRO PRO A . n C 3 49 GLU 49 49 49 GLU GLU A . n C 3 50 LEU 50 50 50 LEU LEU A . n C 3 51 LYS 51 51 51 LYS LYS A . n C 3 52 ASP 52 52 52 ASP ASP A . n C 3 53 LYS 53 53 53 LYS LYS A . n C 3 54 PRO 54 54 54 PRO PRO A . n C 3 55 LEU 55 55 55 LEU LEU A . n C 3 56 GLY 56 56 56 GLY GLY A . n C 3 57 VAL 57 57 57 VAL VAL A . n C 3 58 GLN 58 58 58 GLN GLN A . n C 3 59 GLN 59 59 59 GLN GLN A . n C 3 60 LYS 60 60 60 LYS LYS A . n C 3 61 TYR 61 61 61 TYR TYR A . n C 3 62 LEU 62 62 62 LEU LEU A . n C 3 63 VAL 63 63 63 VAL VAL A . n C 3 64 VAL 64 64 64 VAL VAL A . n C 3 65 THR 65 65 65 THR THR A . n C 3 66 CYS 66 66 66 CYS CYS A . n C 3 67 ASN 67 67 67 ASN ASN A . n C 3 68 TYR 68 68 68 TYR TYR A . n C 3 69 GLU 69 69 69 GLU GLU A . n C 3 70 ALA 70 70 70 ALA ALA A . n C 3 71 ARG 71 71 71 ARG ARG A . n C 3 72 LYS 72 72 72 LYS LYS A . n C 3 73 LEU 73 73 73 LEU LEU A . n C 3 74 GLY 74 74 74 GLY GLY A . n C 3 75 VAL 75 75 75 VAL VAL A . n C 3 76 LYS 76 76 76 LYS LYS A . n C 3 77 LYS 77 77 77 LYS LYS A . n C 3 78 LEU 78 78 78 LEU LEU A . n C 3 79 MET 79 79 79 MET MET A . n C 3 80 ASN 80 80 80 ASN ASN A . n C 3 81 VAL 81 81 81 VAL VAL A . n C 3 82 ARG 82 82 82 ARG ARG A . n C 3 83 ASP 83 83 83 ASP ASP A . n C 3 84 ALA 84 84 84 ALA ALA A . n C 3 85 LYS 85 85 85 LYS LYS A . n C 3 86 GLU 86 86 86 GLU GLU A . n C 3 87 LYS 87 87 87 LYS LYS A . n C 3 88 CYS 88 88 88 CYS CYS A . n C 3 89 PRO 89 89 89 PRO PRO A . n C 3 90 GLN 90 90 90 GLN GLN A . n C 3 91 LEU 91 91 91 LEU LEU A . n C 3 92 VAL 92 92 92 VAL VAL A . n C 3 93 LEU 93 93 93 LEU LEU A . n C 3 94 VAL 94 94 94 VAL VAL A . n C 3 95 ASN 95 95 95 ASN ASN A . n C 3 96 GLY 96 96 96 GLY GLY A . n C 3 97 GLU 97 97 97 GLU GLU A . n C 3 98 ASP 98 98 98 ASP ASP A . n C 3 99 LEU 99 99 99 LEU LEU A . n C 3 100 THR 100 100 100 THR THR A . n C 3 101 ARG 101 101 101 ARG ARG A . n C 3 102 TYR 102 102 102 TYR TYR A . n C 3 103 ARG 103 103 103 ARG ARG A . n C 3 104 GLU 104 104 104 GLU GLU A . n C 3 105 MET 105 105 105 MET MET A . n C 3 106 SER 106 106 106 SER SER A . n C 3 107 TYR 107 107 107 TYR TYR A . n C 3 108 LYS 108 108 108 LYS LYS A . n C 3 109 VAL 109 109 109 VAL VAL A . n C 3 110 THR 110 110 110 THR THR A . n C 3 111 GLU 111 111 111 GLU GLU A . n C 3 112 LEU 112 112 112 LEU LEU A . n C 3 113 LEU 113 113 113 LEU LEU A . n C 3 114 GLU 114 114 114 GLU GLU A . n C 3 115 GLU 115 115 115 GLU GLU A . n C 3 116 PHE 116 116 116 PHE PHE A . n C 3 117 SER 117 117 117 SER SER A . n C 3 118 PRO 118 118 118 PRO PRO A . n C 3 119 VAL 119 119 119 VAL VAL A . n C 3 120 VAL 120 120 120 VAL VAL A . n C 3 121 GLU 121 121 121 GLU GLU A . n C 3 122 ARG 122 122 122 ARG ARG A . n C 3 123 LEU 123 123 123 LEU LEU A . n C 3 124 GLY 124 124 124 GLY GLY A . n C 3 125 PHE 125 125 125 PHE PHE A . n C 3 126 ASP 126 126 126 ASP ASP A . n C 3 127 GLU 127 127 127 GLU GLU A . n C 3 128 ASN 128 128 128 ASN ASN A . n C 3 129 PHE 129 129 129 PHE PHE A . n C 3 130 VAL 130 130 130 VAL VAL A . n C 3 131 ASP 131 131 131 ASP ASP A . n C 3 132 LEU 132 132 132 LEU LEU A . n C 3 133 THR 133 133 133 THR THR A . n C 3 134 GLU 134 134 134 GLU GLU A . n C 3 135 MET 135 135 135 MET MET A . n C 3 136 VAL 136 136 136 VAL VAL A . n C 3 137 GLU 137 137 137 GLU GLU A . n C 3 138 LYS 138 138 138 LYS LYS A . n C 3 139 ARG 139 139 139 ARG ARG A . n C 3 140 LEU 140 140 140 LEU LEU A . n C 3 141 GLN 141 141 141 GLN GLN A . n C 3 142 GLN 142 142 142 GLN GLN A . n C 3 143 LEU 143 143 143 LEU LEU A . n C 3 144 GLN 144 144 144 GLN GLN A . n C 3 145 SER 145 145 145 SER SER A . n C 3 146 ASP 146 146 146 ASP ALA A . n C 3 147 GLU 147 147 147 GLU GLU A . n C 3 148 LEU 148 148 148 LEU LEU A . n C 3 149 SER 149 149 149 SER SER A . n C 3 150 ALA 150 150 150 ALA ALA A . n C 3 151 VAL 151 151 151 VAL VAL A . n C 3 152 THR 152 152 152 THR THR A . n C 3 153 VAL 153 153 153 VAL VAL A . n C 3 154 SER 154 154 154 SER SER A . n C 3 155 GLY 155 155 155 GLY GLY A . n C 3 156 HIS 156 156 156 HIS HIS A . n C 3 157 VAL 157 157 157 VAL VAL A . n C 3 158 TYR 158 158 158 TYR TYR A . n C 3 159 ASN 159 159 159 ASN ASN A . n C 3 160 ASN 160 160 160 ASN ASN A . n C 3 161 GLN 161 161 161 GLN GLN A . n C 3 162 SER 162 162 162 SER SER A . n C 3 163 ILE 163 163 163 ILE ILE A . n C 3 164 ASN 164 164 164 ASN ASN A . n C 3 165 LEU 165 165 165 LEU LEU A . n C 3 166 LEU 166 166 166 LEU LEU A . n C 3 167 ASP 167 167 167 ASP ASP A . n C 3 168 VAL 168 168 168 VAL VAL A . n C 3 169 LEU 169 169 169 LEU LEU A . n C 3 170 HIS 170 170 170 HIS HIS A . n C 3 171 ILE 171 171 171 ILE ILE A . n C 3 172 ARG 172 172 172 ARG ARG A . n C 3 173 LEU 173 173 173 LEU LEU A . n C 3 174 LEU 174 174 174 LEU LEU A . n C 3 175 VAL 175 175 175 VAL VAL A . n C 3 176 GLY 176 176 176 GLY GLY A . n C 3 177 SER 177 177 177 SER SER A . n C 3 178 GLN 178 178 178 GLN GLN A . n C 3 179 ILE 179 179 179 ILE ILE A . n C 3 180 ALA 180 180 180 ALA ALA A . n C 3 181 ALA 181 181 181 ALA ALA A . n C 3 182 GLU 182 182 182 GLU GLU A . n C 3 183 MET 183 183 183 MET MET A . n C 3 184 ARG 184 184 184 ARG ARG A . n C 3 185 GLU 185 185 185 GLU GLU A . n C 3 186 ALA 186 186 186 ALA ALA A . n C 3 187 MET 187 187 187 MET MET A . n C 3 188 TYR 188 188 188 TYR TYR A . n C 3 189 ASN 189 189 189 ASN ASN A . n C 3 190 GLN 190 190 190 GLN GLN A . n C 3 191 LEU 191 191 191 LEU LEU A . n C 3 192 GLY 192 192 192 GLY GLY A . n C 3 193 LEU 193 193 193 LEU LEU A . n C 3 194 THR 194 194 194 THR THR A . n C 3 195 GLY 195 195 195 GLY GLY A . n C 3 196 CYS 196 196 196 CYS CYS A . n C 3 197 ALA 197 197 197 ALA ALA A . n C 3 198 GLY 198 198 198 GLY GLY A . n C 3 199 VAL 199 199 199 VAL VAL A . n C 3 200 ALA 200 200 200 ALA ALA A . n C 3 201 SER 201 201 201 SER SER A . n C 3 202 ASN 202 202 202 ASN ASN A . n C 3 203 LYS 203 203 203 LYS LYS A . n C 3 204 LEU 204 204 204 LEU LEU A . n C 3 205 LEU 205 205 205 LEU LEU A . n C 3 206 ALA 206 206 206 ALA ALA A . n C 3 207 LYS 207 207 207 LYS LYS A . n C 3 208 LEU 208 208 208 LEU LEU A . n C 3 209 VAL 209 209 209 VAL VAL A . n C 3 210 SER 210 210 210 SER SER A . n C 3 211 GLY 211 211 211 GLY GLY A . n C 3 212 VAL 212 212 212 VAL VAL A . n C 3 213 PHE 213 213 213 PHE PHE A . n C 3 214 LYS 214 214 214 LYS LYS A . n C 3 215 PRO 215 215 215 PRO PRO A . n C 3 216 ASN 216 216 216 ASN ASN A . n C 3 217 GLN 217 217 217 GLN GLN A . n C 3 218 GLN 218 218 218 GLN GLN A . n C 3 219 THR 219 219 219 THR THR A . n C 3 220 VAL 220 220 220 VAL VAL A . n C 3 221 LEU 221 221 221 LEU LEU A . n C 3 222 LEU 222 222 222 LEU LEU A . n C 3 223 PRO 223 223 223 PRO PRO A . n C 3 224 GLU 224 224 224 GLU GLU A . n C 3 225 SER 225 225 225 SER SER A . n C 3 226 CYS 226 226 226 CYS CYS A . n C 3 227 GLN 227 227 227 GLN GLN A . n C 3 228 HIS 228 228 228 HIS HIS A . n C 3 229 LEU 229 229 229 LEU LEU A . n C 3 230 ILE 230 230 230 ILE ILE A . n C 3 231 HIS 231 231 231 HIS HIS A . n C 3 232 SER 232 232 232 SER SER A . n C 3 233 LEU 233 233 233 LEU LEU A . n C 3 234 ASN 234 234 234 ASN ASN A . n C 3 235 HIS 235 235 235 HIS HIS A . n C 3 236 ILE 236 236 236 ILE ILE A . n C 3 237 LYS 237 237 237 LYS LYS A . n C 3 238 GLU 238 238 238 GLU GLU A . n C 3 239 ILE 239 239 239 ILE ILE A . n C 3 240 PRO 240 240 240 PRO PRO A . n C 3 241 GLY 241 241 241 GLY GLY A . n C 3 242 ILE 242 242 242 ILE ILE A . n C 3 243 GLY 243 243 243 GLY GLY A . n C 3 244 TYR 244 244 244 TYR TYR A . n C 3 245 LYS 245 245 245 LYS ALA A . n C 3 246 THR 246 246 246 THR THR A . n C 3 247 ALA 247 247 247 ALA ALA A . n C 3 248 LYS 248 248 248 LYS LYS A . n C 3 249 CYS 249 249 249 CYS CYS A . n C 3 250 LEU 250 250 250 LEU LEU A . n C 3 251 GLU 251 251 251 GLU GLU A . n C 3 252 ALA 252 252 252 ALA ALA A . n C 3 253 LEU 253 253 253 LEU LEU A . n C 3 254 GLY 254 254 254 GLY GLY A . n C 3 255 ILE 255 255 255 ILE ILE A . n C 3 256 ASN 256 256 256 ASN ASN A . n C 3 257 SER 257 257 257 SER SER A . n C 3 258 VAL 258 258 258 VAL VAL A . n C 3 259 ARG 259 259 259 ARG ARG A . n C 3 260 ASP 260 260 260 ASP ASP A . n C 3 261 LEU 261 261 261 LEU LEU A . n C 3 262 GLN 262 262 262 GLN GLN A . n C 3 263 THR 263 263 263 THR THR A . n C 3 264 PHE 264 264 264 PHE PHE A . n C 3 265 SER 265 265 265 SER SER A . n C 3 266 PRO 266 266 266 PRO PRO A . n C 3 267 LYS 267 267 267 LYS LYS A . n C 3 268 ILE 268 268 268 ILE ILE A . n C 3 269 LEU 269 269 269 LEU LEU A . n C 3 270 GLU 270 270 270 GLU GLU A . n C 3 271 LYS 271 271 271 LYS ALA A . n C 3 272 GLU 272 272 272 GLU GLU A . n C 3 273 LEU 273 273 273 LEU LEU A . n C 3 274 GLY 274 274 274 GLY GLY A . n C 3 275 ILE 275 275 275 ILE ILE A . n C 3 276 SER 276 276 276 SER SER A . n C 3 277 VAL 277 277 277 VAL VAL A . n C 3 278 ALA 278 278 278 ALA ALA A . n C 3 279 GLN 279 279 279 GLN GLN A . n C 3 280 ARG 280 280 280 ARG ARG A . n C 3 281 ILE 281 281 281 ILE ILE A . n C 3 282 GLN 282 282 282 GLN GLN A . n C 3 283 LYS 283 283 283 LYS LYS A . n C 3 284 LEU 284 284 284 LEU LEU A . n C 3 285 SER 285 285 285 SER SER A . n C 3 286 PHE 286 286 286 PHE PHE A . n C 3 287 GLY 287 287 287 GLY GLY A . n C 3 288 GLU 288 288 288 GLU GLU A . n C 3 289 ASP 289 289 289 ASP ASP A . n C 3 290 ASN 290 290 290 ASN ASN A . n C 3 291 SER 291 291 291 SER SER A . n C 3 292 PRO 292 292 292 PRO PRO A . n C 3 293 VAL 293 293 293 VAL VAL A . n C 3 294 ILE 294 294 294 ILE ILE A . n C 3 295 LEU 295 295 295 LEU LEU A . n C 3 296 SER 296 296 296 SER SER A . n C 3 297 GLY 297 297 297 GLY GLY A . n C 3 298 PRO 298 298 298 PRO PRO A . n C 3 299 PRO 299 299 299 PRO PRO A . n C 3 300 GLN 300 300 300 GLN GLN A . n C 3 301 SER 301 301 301 SER SER A . n C 3 302 PHE 302 302 302 PHE PHE A . n C 3 303 SER 303 303 303 SER SER A . n C 3 304 GLU 304 304 304 GLU GLU A . n C 3 305 GLU 305 305 305 GLU GLU A . n C 3 306 ASP 306 306 306 ASP ASP A . n C 3 307 SER 307 307 307 SER SER A . n C 3 308 PHE 308 308 308 PHE PHE A . n C 3 309 LYS 309 309 309 LYS LYS A . n C 3 310 LYS 310 310 310 LYS LYS A . n C 3 311 CYS 311 311 311 CYS CYS A . n C 3 312 SER 312 312 312 SER SER A . n C 3 313 SER 313 313 313 SER SER A . n C 3 314 GLU 314 314 314 GLU GLU A . n C 3 315 VAL 315 315 315 VAL ALA A . n C 3 316 GLU 316 316 316 GLU ALA A . n C 3 317 ALA 317 317 317 ALA ALA A . n C 3 318 LYS 318 318 318 LYS LYS A . n C 3 319 ASN 319 319 319 ASN ASN A . n C 3 320 LYS 320 320 320 LYS LYS A . n C 3 321 ILE 321 321 321 ILE ILE A . n C 3 322 GLU 322 322 322 GLU GLU A . n C 3 323 GLU 323 323 323 GLU GLU A . n C 3 324 LEU 324 324 324 LEU LEU A . n C 3 325 LEU 325 325 325 LEU LEU A . n C 3 326 ALA 326 326 326 ALA ALA A . n C 3 327 SER 327 327 327 SER SER A . n C 3 328 LEU 328 328 328 LEU LEU A . n C 3 329 LEU 329 329 329 LEU LEU A . n C 3 330 ASN 330 330 330 ASN ASN A . n C 3 331 ARG 331 331 331 ARG ARG A . n C 3 332 VAL 332 332 332 VAL VAL A . n C 3 333 CYS 333 333 333 CYS CYS A . n C 3 334 GLN 334 334 334 GLN GLN A . n C 3 335 ASP 335 335 335 ASP ASP A . n C 3 336 GLY 336 336 336 GLY GLY A . n C 3 337 ARG 337 337 337 ARG ARG A . n C 3 338 LYS 338 338 338 LYS ALA A . n C 3 339 PRO 339 339 339 PRO PRO A . n C 3 340 HIS 340 340 340 HIS HIS A . n C 3 341 THR 341 341 341 THR THR A . n C 3 342 VAL 342 342 342 VAL VAL A . n C 3 343 ARG 343 343 343 ARG ARG A . n C 3 344 LEU 344 344 344 LEU LEU A . n C 3 345 ILE 345 345 345 ILE ILE A . n C 3 346 ILE 346 346 346 ILE ILE A . n C 3 347 ARG 347 347 347 ARG ARG A . n C 3 348 ARG 348 348 348 ARG ARG A . n C 3 349 TYR 349 349 349 TYR ALA A . n C 3 350 SER 350 350 350 SER ALA A . n C 3 351 SER 351 351 351 SER ALA A . n C 3 352 GLU 352 352 352 GLU ALA A . n C 3 353 LYS 353 353 353 LYS ALA A . n C 3 354 HIS 354 354 354 HIS ALA A . n C 3 355 TYR 355 355 355 TYR ALA A . n C 3 356 GLY 356 356 356 GLY GLY A . n C 3 357 ARG 357 357 357 ARG ARG A . n C 3 358 GLU 358 358 358 GLU GLU A . n C 3 359 SER 359 359 359 SER SER A . n C 3 360 ARG 360 360 360 ARG ARG A . n C 3 361 GLN 361 361 361 GLN GLN A . n C 3 362 CYS 362 362 362 CYS CYS A . n C 3 363 PRO 363 363 363 PRO PRO A . n C 3 364 ILE 364 364 364 ILE ILE A . n C 3 365 PRO 365 365 365 PRO PRO A . n C 3 366 SER 366 366 366 SER SER A . n C 3 367 HIS 367 367 367 HIS ALA A . n C 3 368 VAL 368 368 368 VAL VAL A . n C 3 369 ILE 369 369 369 ILE ILE A . n C 3 370 GLN 370 370 370 GLN GLN A . n C 3 371 LYS 371 371 ? ? ? A . n C 3 372 LEU 372 372 ? ? ? A . n C 3 373 GLY 373 373 ? ? ? A . n C 3 374 THR 374 374 ? ? ? A . n C 3 375 GLY 375 375 ? ? ? A . n C 3 376 ASN 376 376 ? ? ? A . n C 3 377 TYR 377 377 ? ? ? A . n C 3 378 ASP 378 378 ? ? ? A . n C 3 379 VAL 379 379 379 VAL ALA A . n C 3 380 MET 380 380 380 MET MET A . n C 3 381 THR 381 381 381 THR THR A . n C 3 382 PRO 382 382 382 PRO PRO A . n C 3 383 MET 383 383 383 MET MET A . n C 3 384 VAL 384 384 384 VAL VAL A . n C 3 385 ASP 385 385 385 ASP ASP A . n C 3 386 ILE 386 386 386 ILE ALA A . n C 3 387 LEU 387 387 387 LEU LEU A . n C 3 388 MET 388 388 388 MET MET A . n C 3 389 LYS 389 389 389 LYS ALA A . n C 3 390 LEU 390 390 390 LEU LEU A . n C 3 391 PHE 391 391 391 PHE PHE A . n C 3 392 ARG 392 392 392 ARG ARG A . n C 3 393 ASN 393 393 393 ASN ASN A . n C 3 394 MET 394 394 394 MET MET A . n C 3 395 VAL 395 395 ? ? ? A . n C 3 396 ASN 396 396 ? ? ? A . n C 3 397 VAL 397 397 ? ? ? A . n C 3 398 LYS 398 398 ? ? ? A . n C 3 399 MET 399 399 ? ? ? A . n C 3 400 PRO 400 400 ? ? ? A . n C 3 401 PHE 401 401 ? ? ? A . n C 3 402 HIS 402 402 ? ? ? A . n C 3 403 LEU 403 403 ? ? ? A . n C 3 404 THR 404 404 404 THR THR A . n C 3 405 LEU 405 405 405 LEU ALA A . n C 3 406 LEU 406 406 406 LEU LEU A . n C 3 407 SER 407 407 407 SER SER A . n C 3 408 VAL 408 408 408 VAL VAL A . n C 3 409 CYS 409 409 409 CYS CYS A . n C 3 410 PHE 410 410 410 PHE PHE A . n C 3 411 CYS 411 411 411 CYS CYS A . n C 3 412 ASN 412 412 412 ASN ASN A . n C 3 413 LEU 413 413 413 LEU LEU A . n C 3 414 LYS 414 414 414 LYS LYS A . n C 3 415 ALA 415 415 ? ? ? A . n C 3 416 LEU 416 416 ? ? ? A . n C 3 417 ASN 417 417 ? ? ? A . n C 3 418 THR 418 418 ? ? ? A . n C 3 419 ALA 419 419 ? ? ? A . n C 3 420 LYS 420 420 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 871 871 MG MG A . E 4 MG 1 872 872 MG MG A . F 5 TTP 1 875 875 TTP TTP A . G 6 HOH 1 914 914 HOH HOH P . G 6 HOH 2 927 927 HOH HOH P . G 6 HOH 3 972 972 HOH HOH P . H 6 HOH 1 900 900 HOH HOH T . H 6 HOH 2 903 903 HOH HOH T . H 6 HOH 3 907 907 HOH HOH T . H 6 HOH 4 908 908 HOH HOH T . H 6 HOH 5 937 937 HOH HOH T . H 6 HOH 6 938 938 HOH HOH T . H 6 HOH 7 942 942 HOH HOH T . H 6 HOH 8 944 944 HOH HOH T . H 6 HOH 9 957 957 HOH HOH T . H 6 HOH 10 969 969 HOH HOH T . H 6 HOH 11 971 971 HOH HOH T . H 6 HOH 12 975 975 HOH HOH T . H 6 HOH 13 985 985 HOH HOH T . H 6 HOH 14 992 992 HOH HOH T . I 6 HOH 1 901 901 HOH HOH A . I 6 HOH 2 902 902 HOH HOH A . I 6 HOH 3 904 904 HOH HOH A . I 6 HOH 4 905 905 HOH HOH A . I 6 HOH 5 906 906 HOH HOH A . I 6 HOH 6 909 909 HOH HOH A . I 6 HOH 7 910 910 HOH HOH A . I 6 HOH 8 911 911 HOH HOH A . I 6 HOH 9 912 912 HOH HOH A . I 6 HOH 10 913 913 HOH HOH A . I 6 HOH 11 915 915 HOH HOH A . I 6 HOH 12 916 916 HOH HOH A . I 6 HOH 13 918 918 HOH HOH A . I 6 HOH 14 919 919 HOH HOH A . I 6 HOH 15 920 920 HOH HOH A . I 6 HOH 16 921 921 HOH HOH A . I 6 HOH 17 923 923 HOH HOH A . I 6 HOH 18 924 924 HOH HOH A . I 6 HOH 19 925 925 HOH HOH A . I 6 HOH 20 926 926 HOH HOH A . I 6 HOH 21 928 928 HOH HOH A . I 6 HOH 22 929 929 HOH HOH A . I 6 HOH 23 930 930 HOH HOH A . I 6 HOH 24 931 931 HOH HOH A . I 6 HOH 25 932 932 HOH HOH A . I 6 HOH 26 933 933 HOH HOH A . I 6 HOH 27 934 934 HOH HOH A . I 6 HOH 28 935 935 HOH HOH A . I 6 HOH 29 936 936 HOH HOH A . I 6 HOH 30 939 939 HOH HOH A . I 6 HOH 31 940 940 HOH HOH A . I 6 HOH 32 941 941 HOH HOH A . I 6 HOH 33 946 946 HOH HOH A . I 6 HOH 34 948 948 HOH HOH A . I 6 HOH 35 949 949 HOH HOH A . I 6 HOH 36 950 950 HOH HOH A . I 6 HOH 37 951 951 HOH HOH A . I 6 HOH 38 953 953 HOH HOH A . I 6 HOH 39 954 954 HOH HOH A . I 6 HOH 40 955 955 HOH HOH A . I 6 HOH 41 956 956 HOH HOH A . I 6 HOH 42 958 958 HOH HOH A . I 6 HOH 43 959 959 HOH HOH A . I 6 HOH 44 960 960 HOH HOH A . I 6 HOH 45 961 961 HOH HOH A . I 6 HOH 46 962 962 HOH HOH A . I 6 HOH 47 963 963 HOH HOH A . I 6 HOH 48 964 964 HOH HOH A . I 6 HOH 49 965 965 HOH HOH A . I 6 HOH 50 966 966 HOH HOH A . I 6 HOH 51 967 967 HOH HOH A . I 6 HOH 52 968 968 HOH HOH A . I 6 HOH 53 970 970 HOH HOH A . I 6 HOH 54 973 973 HOH HOH A . I 6 HOH 55 974 974 HOH HOH A . I 6 HOH 56 976 976 HOH HOH A . I 6 HOH 57 978 978 HOH HOH A . I 6 HOH 58 979 979 HOH HOH A . I 6 HOH 59 980 980 HOH HOH A . I 6 HOH 60 981 981 HOH HOH A . I 6 HOH 61 983 983 HOH HOH A . I 6 HOH 62 984 984 HOH HOH A . I 6 HOH 63 986 986 HOH HOH A . I 6 HOH 64 988 988 HOH HOH A . I 6 HOH 65 989 989 HOH HOH A . I 6 HOH 66 990 990 HOH HOH A . I 6 HOH 67 991 991 HOH HOH A . I 6 HOH 68 993 993 HOH HOH A . I 6 HOH 69 994 994 HOH HOH A . I 6 HOH 70 995 995 HOH HOH A . I 6 HOH 71 996 996 HOH HOH A . I 6 HOH 72 997 997 HOH HOH A . I 6 HOH 73 998 998 HOH HOH A . I 6 HOH 74 999 999 HOH HOH A . I 6 HOH 75 1000 1000 HOH HOH A . I 6 HOH 76 1003 1003 HOH HOH A . I 6 HOH 77 1004 1004 HOH HOH A . I 6 HOH 78 1005 1005 HOH HOH A . I 6 HOH 79 1006 1006 HOH HOH A . I 6 HOH 80 1007 1007 HOH HOH A . I 6 HOH 81 1008 1008 HOH HOH A . I 6 HOH 82 1009 1009 HOH HOH A . I 6 HOH 83 1010 1010 HOH HOH A . I 6 HOH 84 1011 1011 HOH HOH A . I 6 HOH 85 1012 1012 HOH HOH A . I 6 HOH 86 1013 1013 HOH HOH A . I 6 HOH 87 1014 1014 HOH HOH A . I 6 HOH 88 1015 1015 HOH HOH A . I 6 HOH 89 1016 1016 HOH HOH A . I 6 HOH 90 1018 1018 HOH HOH A . I 6 HOH 91 1019 1019 HOH HOH A . I 6 HOH 92 1020 1020 HOH HOH A . I 6 HOH 93 1021 1021 HOH HOH A . I 6 HOH 94 1022 1022 HOH HOH A . I 6 HOH 95 1023 1023 HOH HOH A . I 6 HOH 96 1025 1025 HOH HOH A . I 6 HOH 97 1026 1026 HOH HOH A . I 6 HOH 98 1027 1027 HOH HOH A . I 6 HOH 99 1028 1028 HOH HOH A . I 6 HOH 100 1029 1029 HOH HOH A . I 6 HOH 101 1030 1030 HOH HOH A . I 6 HOH 102 1031 1031 HOH HOH A . I 6 HOH 103 1032 1032 HOH HOH A . I 6 HOH 104 1034 1034 HOH HOH A . I 6 HOH 105 1036 1036 HOH HOH A . I 6 HOH 106 1037 1037 HOH HOH A . I 6 HOH 107 1039 1039 HOH HOH A . I 6 HOH 108 1040 1040 HOH HOH A . I 6 HOH 109 1041 1041 HOH HOH A . I 6 HOH 110 1042 1042 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A DOC 7 P DOC 873 ? DC "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" 2 B EDA 2 T EDA 840 ? DA ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 49.0295000000 -0.8660254038 -0.5000000000 0.0000000000 84.9215850697 0.0000000000 0.0000000000 -1.0000000000 33.8503333333 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O ? C LEU 35 ? A LEU 35 ? 1_555 84.2 ? 2 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 86.3 ? 3 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 90.3 ? 4 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1G ? F TTP . ? A TTP 875 ? 1_555 101.1 ? 5 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1G ? F TTP . ? A TTP 875 ? 1_555 96.3 ? 6 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1G ? F TTP . ? A TTP 875 ? 1_555 170.5 ? 7 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 173.2 ? 8 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 91.1 ? 9 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 88.8 ? 10 O1G ? F TTP . ? A TTP 875 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 84.3 ? 11 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 103.4 ? 12 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 168.2 ? 13 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 81.3 ? 14 O1G ? F TTP . ? A TTP 875 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 91.2 ? 15 O2B ? F TTP . ? A TTP 875 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 80.5 ? 16 OD1 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 44.5 ? 17 OD1 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 OE2 ? C GLU 127 ? A GLU 127 ? 1_555 94.2 ? 18 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 OE2 ? C GLU 127 ? A GLU 127 ? 1_555 112.0 ? 19 OD1 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 123.5 ? 20 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 87.5 ? 21 OE2 ? C GLU 127 ? A GLU 127 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 137.4 ? 22 OD1 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O ? I HOH . ? A HOH 932 ? 1_555 64.9 ? 23 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O ? I HOH . ? A HOH 932 ? 1_555 82.8 ? 24 OE2 ? C GLU 127 ? A GLU 127 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O ? I HOH . ? A HOH 932 ? 1_555 133.2 ? 25 O1A ? F TTP . ? A TTP 875 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O ? I HOH . ? A HOH 932 ? 1_555 84.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-07-04 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.conn_type_id' 17 4 'Structure model' '_struct_conn.id' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 4 'Structure model' '_struct_conn_type.id' 35 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 16.1742 16.6531 6.0704 0.3552 0.3587 0.2650 0.0205 -0.0293 0.0046 0.1125 0.7021 1.6540 0.1630 0.0852 0.4779 0.0515 0.0174 -0.0296 -0.0149 -0.0904 0.0305 0.0951 0.1960 0.0389 'X-RAY DIFFRACTION' 2 ? refined -5.0835 16.2253 23.7223 0.3333 0.3270 0.3458 -0.1790 0.0679 -0.0418 1.6038 3.0709 4.2375 -0.1424 -0.7810 0.7510 0.1035 -0.0819 -0.1373 0.1821 -0.1590 0.4805 0.4428 -0.3791 0.0555 'X-RAY DIFFRACTION' 3 ? refined 0.2036 35.5023 -3.3046 0.3269 0.2564 0.4778 0.0060 -0.2184 -0.0304 3.6034 2.1649 3.4880 -0.6315 2.8764 0.7745 -0.5834 -0.0730 0.8525 -0.1225 -0.1885 -0.1288 -0.2702 -0.1665 0.7719 'X-RAY DIFFRACTION' 4 ? refined 7.0497 41.3332 32.9066 0.4633 0.1735 0.3578 -0.2712 0.2629 -0.2093 2.9095 6.8502 3.9023 1.9998 -1.1995 0.0894 0.9063 -0.2384 0.4146 1.1320 -0.6700 0.8768 -0.2941 0.2720 -0.2363 'X-RAY DIFFRACTION' 5 ? refined 4.3321 36.8890 17.2732 0.3420 0.2985 0.4967 -0.1273 -0.0394 -0.0452 1.3952 1.6560 0.5579 -0.0858 -1.1398 -0.4785 0.0607 -0.0815 0.5780 -0.0049 -0.0886 0.5145 0.0134 0.1891 0.0279 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 26 C 26 A 37 C 37 ? 'X-RAY DIFFRACTION' ? 2 1 A 99 C 99 A 224 C 224 ? 'X-RAY DIFFRACTION' ? 3 2 A 38 C 38 A 98 C 98 ? 'X-RAY DIFFRACTION' ? 4 3 A 225 C 225 A 287 C 287 ? 'X-RAY DIFFRACTION' ? 5 4 A 298 C 298 A 414 C 414 ? 'X-RAY DIFFRACTION' ? 6 5 T 839 B 1 T 847 B 9 ? 'X-RAY DIFFRACTION' ? 7 5 P 867 A 1 P 873 A 7 ? 'X-RAY DIFFRACTION' ? 8 5 A 875 F 1 A 875 F 1 ? 'X-RAY DIFFRACTION' ? 9 5 A 871 D 1 A 872 E 1 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 ADSC 'data collection' . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O5'" _pdbx_validate_symm_contact.auth_asym_id_1 P _pdbx_validate_symm_contact.auth_comp_id_1 DA _pdbx_validate_symm_contact.auth_seq_id_1 867 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O3'" _pdbx_validate_symm_contact.auth_asym_id_2 T _pdbx_validate_symm_contact.auth_comp_id_2 DT _pdbx_validate_symm_contact.auth_seq_id_2 847 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 10_665 _pdbx_validate_symm_contact.dist 1.91 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C5 P DG 868 ? ? N7 P DG 868 ? ? 1.442 1.388 0.054 0.006 N 2 1 C5 P DG 869 ? ? N7 P DG 869 ? ? 1.451 1.388 0.063 0.006 N 3 1 "C2'" P DC 871 ? ? "C1'" P DC 871 ? ? 1.591 1.519 0.072 0.010 N 4 1 "O4'" P DC 871 ? ? "C1'" P DC 871 ? ? 1.346 1.418 -0.072 0.012 N 5 1 P P DC 872 ? ? OP2 P DC 872 ? ? 1.370 1.485 -0.115 0.017 N 6 1 "O3'" P DC 872 ? ? "C3'" P DC 872 ? ? 1.339 1.419 -0.080 0.006 N 7 1 "C5'" T DT 839 ? ? "C4'" T DT 839 ? ? 1.589 1.512 0.077 0.007 N 8 1 "O4'" T DT 839 ? ? "C4'" T DT 839 ? ? 1.510 1.449 0.061 0.009 N 9 1 "C1'" T DT 839 ? ? N1 T DT 839 ? ? 1.588 1.488 0.100 0.013 N 10 1 C5 T DT 839 ? ? C6 T DT 839 ? ? 1.388 1.339 0.049 0.007 N 11 1 C6 T DT 839 ? ? N1 T DT 839 ? ? 1.428 1.378 0.050 0.007 N 12 1 C5 T DT 839 ? ? C7 T DT 839 ? ? 1.534 1.496 0.038 0.006 N 13 1 "O3'" T DT 839 ? ? P T EDA 840 ? ? 1.346 1.607 -0.261 0.012 Y 14 1 "O3'" T EDA 840 ? ? P T DG 841 ? ? 1.346 1.607 -0.261 0.012 Y 15 1 P T DG 841 ? ? "O5'" T DG 841 ? ? 1.709 1.593 0.116 0.010 N 16 1 "O3'" T DG 841 ? ? "C3'" T DG 841 ? ? 1.371 1.419 -0.048 0.006 N 17 1 C2 T DG 841 ? ? N3 T DG 841 ? ? 1.378 1.323 0.055 0.008 N 18 1 C6 T DG 841 ? ? N1 T DG 841 ? ? 1.455 1.391 0.064 0.007 N 19 1 "O3'" T DG 842 ? ? "C3'" T DG 842 ? ? 1.372 1.419 -0.047 0.006 N 20 1 P T DG 843 ? ? OP2 T DG 843 ? ? 1.383 1.485 -0.102 0.017 N 21 1 P T DG 843 ? ? "O5'" T DG 843 ? ? 1.716 1.593 0.123 0.010 N 22 1 "C5'" T DG 843 ? ? "C4'" T DG 843 ? ? 1.438 1.509 -0.071 0.011 N 23 1 "C3'" T DG 843 ? ? "C2'" T DG 843 ? ? 1.457 1.516 -0.059 0.008 N 24 1 "O4'" T DG 843 ? ? "C1'" T DG 843 ? ? 1.310 1.418 -0.108 0.012 N 25 1 C6 T DG 843 ? ? N1 T DG 843 ? ? 1.450 1.391 0.059 0.007 N 26 1 "O3'" T DT 844 ? ? "C3'" T DT 844 ? ? 1.327 1.419 -0.092 0.006 N 27 1 N1 T DT 844 ? ? C2 T DT 844 ? ? 1.326 1.376 -0.050 0.008 N 28 1 C2 T DT 844 ? ? O2 T DT 844 ? ? 1.167 1.220 -0.053 0.008 N 29 1 "C4'" T DC 845 ? ? "C3'" T DC 845 ? ? 1.590 1.529 0.061 0.010 N 30 1 N1 T DC 845 ? ? C6 T DC 845 ? ? 1.324 1.367 -0.043 0.006 N 31 1 "C1'" T DT 847 ? ? N1 T DT 847 ? ? 1.579 1.488 0.091 0.013 N 32 1 CA A ALA 25 ? ? CB A ALA 25 ? ? 1.660 1.520 0.140 0.021 N 33 1 CB A VAL 29 ? ? CG1 A VAL 29 ? ? 1.651 1.524 0.127 0.021 N 34 1 CB A VAL 64 ? ? CG2 A VAL 64 ? ? 1.386 1.524 -0.138 0.021 N 35 1 CE2 A TYR 68 ? ? CD2 A TYR 68 ? ? 1.281 1.389 -0.108 0.015 N 36 1 CZ A ARG 103 ? ? NH2 A ARG 103 ? ? 1.436 1.326 0.110 0.013 N 37 1 CD A GLU 104 ? ? OE2 A GLU 104 ? ? 1.339 1.252 0.087 0.011 N 38 1 CG A ARG 122 ? ? CD A ARG 122 ? ? 1.719 1.515 0.204 0.025 N 39 1 CD A ARG 122 ? ? NE A ARG 122 ? ? 1.355 1.460 -0.105 0.017 N 40 1 CD A GLU 134 ? ? OE1 A GLU 134 ? ? 1.333 1.252 0.081 0.011 N 41 1 CE A LYS 207 ? ? NZ A LYS 207 ? ? 1.231 1.486 -0.255 0.025 N 42 1 CE A LYS 214 ? ? NZ A LYS 214 ? ? 1.326 1.486 -0.160 0.025 N 43 1 CA A LYS 214 ? ? C A LYS 214 ? ? 1.348 1.525 -0.177 0.026 N 44 1 N A ASN 216 ? ? CA A ASN 216 ? ? 1.600 1.459 0.141 0.020 N 45 1 CB A CYS 249 ? ? SG A CYS 249 ? ? 1.923 1.818 0.105 0.017 N 46 1 CB A SER 313 ? ? OG A SER 313 ? ? 1.812 1.418 0.394 0.013 N 47 1 CE A LYS 318 ? ? NZ A LYS 318 ? ? 1.843 1.486 0.357 0.025 N 48 1 C A ASN 319 ? ? O A ASN 319 ? ? 1.412 1.229 0.183 0.019 N 49 1 CG A ASP 385 ? ? OD1 A ASP 385 ? ? 1.427 1.249 0.178 0.023 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" P DA 867 ? ? "C5'" P DA 867 ? ? "C4'" P DA 867 ? ? 140.53 111.00 29.53 2.50 N 2 1 "O4'" P DA 867 ? ? "C4'" P DA 867 ? ? "C3'" P DA 867 ? ? 98.83 104.50 -5.67 0.40 N 3 1 "C1'" P DA 867 ? ? "O4'" P DA 867 ? ? "C4'" P DA 867 ? ? 117.73 110.30 7.43 0.70 N 4 1 "O4'" P DA 867 ? ? "C1'" P DA 867 ? ? N9 P DA 867 ? ? 111.77 108.30 3.47 0.30 N 5 1 "O4'" P DG 868 ? ? "C1'" P DG 868 ? ? N9 P DG 868 ? ? 112.26 108.30 3.96 0.30 N 6 1 "O4'" P DG 869 ? ? "C1'" P DG 869 ? ? N9 P DG 869 ? ? 116.21 108.30 7.91 0.30 N 7 1 "C3'" P DG 869 ? ? "O3'" P DG 869 ? ? P P DA 870 ? ? 111.12 119.70 -8.58 1.20 Y 8 1 "O5'" P DA 870 ? ? P P DA 870 ? ? OP2 P DA 870 ? ? 95.29 105.70 -10.41 0.90 N 9 1 "O4'" P DA 870 ? ? "C4'" P DA 870 ? ? "C3'" P DA 870 ? ? 114.66 106.00 8.66 0.60 N 10 1 "O4'" P DA 870 ? ? "C1'" P DA 870 ? ? "C2'" P DA 870 ? ? 110.79 106.80 3.99 0.50 N 11 1 "O4'" P DA 870 ? ? "C1'" P DA 870 ? ? N9 P DA 870 ? ? 118.57 108.30 10.27 0.30 N 12 1 C6 P DA 870 ? ? N1 P DA 870 ? ? C2 P DA 870 ? ? 114.91 118.60 -3.69 0.60 N 13 1 N1 P DA 870 ? ? C2 P DA 870 ? ? N3 P DA 870 ? ? 134.25 129.30 4.95 0.50 N 14 1 OP1 P DC 871 ? ? P P DC 871 ? ? OP2 P DC 871 ? ? 106.87 119.60 -12.73 1.50 N 15 1 "O4'" P DC 871 ? ? "C4'" P DC 871 ? ? "C3'" P DC 871 ? ? 111.65 106.00 5.65 0.60 N 16 1 "O4'" P DC 872 ? ? "C4'" P DC 872 ? ? "C3'" P DC 872 ? ? 112.31 106.00 6.31 0.60 N 17 1 "O4'" P DC 872 ? ? "C1'" P DC 872 ? ? N1 P DC 872 ? ? 102.95 108.00 -5.05 0.70 N 18 1 C5 P DC 872 ? ? C6 P DC 872 ? ? N1 P DC 872 ? ? 117.82 121.00 -3.18 0.50 N 19 1 "O4'" T DT 839 ? ? "C4'" T DT 839 ? ? "C3'" T DT 839 ? ? 100.57 104.50 -3.93 0.40 N 20 1 "C5'" T DT 839 ? ? "C4'" T DT 839 ? ? "O4'" T DT 839 ? ? 123.72 109.80 13.92 1.10 N 21 1 "O4'" T DT 839 ? ? "C1'" T DT 839 ? ? N1 T DT 839 ? ? 113.41 108.30 5.11 0.30 N 22 1 C6 T DT 839 ? ? N1 T DT 839 ? ? C2 T DT 839 ? ? 118.18 121.30 -3.12 0.50 N 23 1 "O3'" T DT 839 ? ? P T EDA 840 ? ? OP2 T EDA 840 ? ? 134.22 110.50 23.72 1.10 Y 24 1 "O3'" T DT 839 ? ? P T EDA 840 ? ? OP1 T EDA 840 ? ? 77.44 105.20 -27.76 2.20 Y 25 1 "C3'" T EDA 840 ? ? "O3'" T EDA 840 ? ? P T DG 841 ? ? 140.25 119.70 20.55 1.20 Y 26 1 "O3'" T EDA 840 ? ? P T DG 841 ? ? OP1 T DG 841 ? ? 117.78 110.50 7.28 1.10 Y 27 1 C5 T DG 841 ? ? C6 T DG 841 ? ? N1 T DG 841 ? ? 114.52 111.50 3.02 0.50 N 28 1 C5 T DG 841 ? ? C6 T DG 841 ? ? O6 T DG 841 ? ? 124.50 128.60 -4.10 0.60 N 29 1 "C1'" T DG 842 ? ? "O4'" T DG 842 ? ? "C4'" T DG 842 ? ? 115.62 110.30 5.32 0.70 N 30 1 "C4'" T DG 842 ? ? "C3'" T DG 842 ? ? "O3'" T DG 842 ? ? 126.25 112.30 13.95 2.00 N 31 1 "C3'" T DG 842 ? ? "C2'" T DG 842 ? ? "C1'" T DG 842 ? ? 110.04 102.50 7.54 1.20 N 32 1 "O4'" T DG 842 ? ? "C1'" T DG 842 ? ? "C2'" T DG 842 ? ? 97.84 105.90 -8.06 0.80 N 33 1 "O4'" T DG 842 ? ? "C1'" T DG 842 ? ? N9 T DG 842 ? ? 99.98 108.00 -8.02 0.70 N 34 1 "O4'" T DG 843 ? ? "C4'" T DG 843 ? ? "C3'" T DG 843 ? ? 111.65 106.00 5.65 0.60 N 35 1 "C4'" T DG 843 ? ? "C3'" T DG 843 ? ? "C2'" T DG 843 ? ? 91.17 102.20 -11.03 0.70 N 36 1 "C3'" T DG 843 ? ? "C2'" T DG 843 ? ? "C1'" T DG 843 ? ? 110.31 102.50 7.81 1.20 N 37 1 "O4'" T DG 843 ? ? "C1'" T DG 843 ? ? "C2'" T DG 843 ? ? 94.24 105.90 -11.66 0.80 N 38 1 N9 T DG 843 ? ? "C1'" T DG 843 ? ? "C2'" T DG 843 ? ? 98.52 112.60 -14.08 1.90 N 39 1 "O4'" T DG 843 ? ? "C1'" T DG 843 ? ? N9 T DG 843 ? ? 102.30 108.00 -5.70 0.70 N 40 1 C6 T DG 843 ? ? N1 T DG 843 ? ? C2 T DG 843 ? ? 121.05 125.10 -4.05 0.60 N 41 1 C2 T DG 843 ? ? N3 T DG 843 ? ? C4 T DG 843 ? ? 115.03 111.90 3.13 0.50 N 42 1 C4 T DG 843 ? ? C5 T DG 843 ? ? N7 T DG 843 ? ? 107.92 110.80 -2.88 0.40 N 43 1 C8 T DG 843 ? ? N9 T DG 843 ? ? C4 T DG 843 ? ? 103.76 106.40 -2.64 0.40 N 44 1 N9 T DG 843 ? ? C4 T DG 843 ? ? C5 T DG 843 ? ? 108.80 105.40 3.40 0.40 N 45 1 "C5'" T DT 844 ? ? "C4'" T DT 844 ? ? "C3'" T DT 844 ? ? 102.56 114.10 -11.54 1.80 N 46 1 C6 T DT 844 ? ? N1 T DT 844 ? ? C2 T DT 844 ? ? 117.45 121.30 -3.85 0.50 N 47 1 N1 T DT 844 ? ? C2 T DT 844 ? ? N3 T DT 844 ? ? 119.23 114.60 4.63 0.60 N 48 1 C4 T DT 844 ? ? C5 T DT 844 ? ? C7 T DT 844 ? ? 123.87 119.00 4.87 0.60 N 49 1 C6 T DT 844 ? ? C5 T DT 844 ? ? C7 T DT 844 ? ? 119.24 122.90 -3.66 0.60 N 50 1 "O4'" T DC 846 ? ? "C4'" T DC 846 ? ? "C3'" T DC 846 ? ? 100.77 104.50 -3.73 0.40 N 51 1 "C4'" T DC 846 ? ? "C3'" T DC 846 ? ? "C2'" T DC 846 ? ? 109.28 103.10 6.18 0.90 N 52 1 "O4'" T DC 846 ? ? "C1'" T DC 846 ? ? N1 T DC 846 ? ? 101.44 108.00 -6.56 0.70 N 53 1 C6 T DC 846 ? ? N1 T DC 846 ? ? C2 T DC 846 ? ? 117.40 120.30 -2.90 0.40 N 54 1 C5 T DC 846 ? ? C6 T DC 846 ? ? N1 T DC 846 ? ? 125.33 121.00 4.33 0.50 N 55 1 "O4'" T DT 847 ? ? "C1'" T DT 847 ? ? N1 T DT 847 ? ? 103.77 108.00 -4.23 0.70 N 56 1 N1 T DT 847 ? ? C2 T DT 847 ? ? N3 T DT 847 ? ? 119.46 114.60 4.86 0.60 N 57 1 C2 T DT 847 ? ? N3 T DT 847 ? ? C4 T DT 847 ? ? 120.16 127.20 -7.04 0.60 N 58 1 N3 T DT 847 ? ? C4 T DT 847 ? ? C5 T DT 847 ? ? 119.16 115.20 3.96 0.60 N 59 1 C4 T DT 847 ? ? C5 T DT 847 ? ? C7 T DT 847 ? ? 123.25 119.00 4.25 0.60 N 60 1 C6 T DT 847 ? ? C5 T DT 847 ? ? C7 T DT 847 ? ? 118.87 122.90 -4.03 0.60 N 61 1 CB A ASP 52 ? ? CG A ASP 52 ? ? OD2 A ASP 52 ? ? 124.37 118.30 6.07 0.90 N 62 1 NE A ARG 71 ? ? CZ A ARG 71 ? ? NH1 A ARG 71 ? ? 124.24 120.30 3.94 0.50 N 63 1 NE A ARG 71 ? ? CZ A ARG 71 ? ? NH2 A ARG 71 ? ? 116.52 120.30 -3.78 0.50 N 64 1 CB A LEU 73 ? ? CG A LEU 73 ? ? CD1 A LEU 73 ? ? 125.29 111.00 14.29 1.70 N 65 1 CB A ASP 83 ? ? CG A ASP 83 ? ? OD2 A ASP 83 ? ? 124.44 118.30 6.14 0.90 N 66 1 NH1 A ARG 103 ? ? CZ A ARG 103 ? ? NH2 A ARG 103 ? ? 126.57 119.40 7.17 1.10 N 67 1 NE A ARG 103 ? ? CZ A ARG 103 ? ? NH2 A ARG 103 ? ? 115.78 120.30 -4.52 0.50 N 68 1 CG A ARG 122 ? ? CD A ARG 122 ? ? NE A ARG 122 ? ? 96.61 111.80 -15.19 2.10 N 69 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH2 A ARG 122 ? ? 115.08 120.30 -5.22 0.50 N 70 1 NE A ARG 172 ? ? CZ A ARG 172 ? ? NH2 A ARG 172 ? ? 116.87 120.30 -3.43 0.50 N 71 1 CB A LEU 205 ? ? CG A LEU 205 ? ? CD1 A LEU 205 ? ? 122.16 111.00 11.16 1.70 N 72 1 N A PRO 215 ? ? CD A PRO 215 ? ? CG A PRO 215 ? ? 90.47 103.20 -12.73 1.50 N 73 1 O A PRO 215 ? ? C A PRO 215 ? ? N A ASN 216 ? ? 113.10 122.70 -9.60 1.60 Y 74 1 NE A ARG 331 ? ? CZ A ARG 331 ? ? NH1 A ARG 331 ? ? 123.56 120.30 3.26 0.50 N 75 1 NE A ARG 343 ? ? CZ A ARG 343 ? ? NH1 A ARG 343 ? ? 123.36 120.30 3.06 0.50 N 76 1 NE A ARG 343 ? ? CZ A ARG 343 ? ? NH2 A ARG 343 ? ? 116.54 120.30 -3.76 0.50 N 77 1 CB A ASP 385 ? ? CG A ASP 385 ? ? OD1 A ASP 385 ? ? 125.05 118.30 6.75 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 26 ? ? -103.78 -78.70 2 1 CYS A 37 ? ? 30.01 52.99 3 1 GLU A 49 ? ? -58.46 -9.63 4 1 ASP A 52 ? ? 52.53 -8.91 5 1 LYS A 60 ? ? 65.20 -126.89 6 1 CYS A 88 ? ? -155.08 83.23 7 1 SER A 145 ? ? -65.48 48.87 8 1 ASP A 146 ? ? -155.34 -58.52 9 1 PRO A 215 ? ? -61.71 -81.45 10 1 LYS A 271 ? ? -83.77 45.81 11 1 GLU A 272 ? ? -159.86 -13.07 12 1 LEU A 273 ? ? -144.86 -2.19 13 1 ASP A 289 ? ? -166.43 110.73 14 1 PHE A 308 ? ? 170.69 96.81 15 1 LYS A 310 ? ? 82.07 -0.97 16 1 GLU A 314 ? ? 151.18 38.19 17 1 VAL A 315 ? ? 168.47 -30.68 18 1 LYS A 318 ? ? -146.75 -25.28 19 1 CYS A 333 ? ? -40.13 -86.45 20 1 GLN A 334 ? ? -22.87 -47.25 21 1 ARG A 337 ? ? -30.15 148.34 22 1 SER A 350 ? ? -176.29 -72.01 23 1 LYS A 353 ? ? -47.38 84.03 24 1 ASN A 393 ? ? -44.06 -9.37 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 PHE A 213 ? ? LYS A 214 ? ? -144.11 2 1 ILE A 346 ? ? ARG A 347 ? ? 149.16 3 1 MET A 380 ? ? THR A 381 ? ? -149.18 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id T _pdbx_validate_planes.auth_seq_id 843 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.058 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 "O3'" T DT 839 ? ? P T EDA 840 ? ? 1.35 2 1 "O3'" T EDA 840 ? ? P T DG 841 ? ? 1.35 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 146 ? CG ? C ASP 146 CG 2 1 Y 1 A ASP 146 ? OD1 ? C ASP 146 OD1 3 1 Y 1 A ASP 146 ? OD2 ? C ASP 146 OD2 4 1 Y 1 A LYS 245 ? CG ? C LYS 245 CG 5 1 Y 1 A LYS 245 ? CD ? C LYS 245 CD 6 1 Y 1 A LYS 245 ? CE ? C LYS 245 CE 7 1 Y 1 A LYS 245 ? NZ ? C LYS 245 NZ 8 1 Y 1 A LYS 271 ? CG ? C LYS 271 CG 9 1 Y 1 A LYS 271 ? CD ? C LYS 271 CD 10 1 Y 1 A LYS 271 ? CE ? C LYS 271 CE 11 1 Y 1 A LYS 271 ? NZ ? C LYS 271 NZ 12 1 Y 1 A VAL 315 ? CG1 ? C VAL 315 CG1 13 1 Y 1 A VAL 315 ? CG2 ? C VAL 315 CG2 14 1 Y 1 A GLU 316 ? CG ? C GLU 316 CG 15 1 Y 1 A GLU 316 ? CD ? C GLU 316 CD 16 1 Y 1 A GLU 316 ? OE1 ? C GLU 316 OE1 17 1 Y 1 A GLU 316 ? OE2 ? C GLU 316 OE2 18 1 Y 1 A LYS 338 ? CG ? C LYS 338 CG 19 1 Y 1 A LYS 338 ? CD ? C LYS 338 CD 20 1 Y 1 A LYS 338 ? CE ? C LYS 338 CE 21 1 Y 1 A LYS 338 ? NZ ? C LYS 338 NZ 22 1 Y 1 A TYR 349 ? CG ? C TYR 349 CG 23 1 Y 1 A TYR 349 ? CD1 ? C TYR 349 CD1 24 1 Y 1 A TYR 349 ? CD2 ? C TYR 349 CD2 25 1 Y 1 A TYR 349 ? CE1 ? C TYR 349 CE1 26 1 Y 1 A TYR 349 ? CE2 ? C TYR 349 CE2 27 1 Y 1 A TYR 349 ? CZ ? C TYR 349 CZ 28 1 Y 1 A TYR 349 ? OH ? C TYR 349 OH 29 1 Y 1 A SER 350 ? OG ? C SER 350 OG 30 1 Y 1 A SER 351 ? OG ? C SER 351 OG 31 1 Y 1 A GLU 352 ? CG ? C GLU 352 CG 32 1 Y 1 A GLU 352 ? CD ? C GLU 352 CD 33 1 Y 1 A GLU 352 ? OE1 ? C GLU 352 OE1 34 1 Y 1 A GLU 352 ? OE2 ? C GLU 352 OE2 35 1 Y 1 A LYS 353 ? CG ? C LYS 353 CG 36 1 Y 1 A LYS 353 ? CD ? C LYS 353 CD 37 1 Y 1 A LYS 353 ? CE ? C LYS 353 CE 38 1 Y 1 A LYS 353 ? NZ ? C LYS 353 NZ 39 1 Y 1 A HIS 354 ? CG ? C HIS 354 CG 40 1 Y 1 A HIS 354 ? ND1 ? C HIS 354 ND1 41 1 Y 1 A HIS 354 ? CD2 ? C HIS 354 CD2 42 1 Y 1 A HIS 354 ? CE1 ? C HIS 354 CE1 43 1 Y 1 A HIS 354 ? NE2 ? C HIS 354 NE2 44 1 Y 1 A TYR 355 ? CG ? C TYR 355 CG 45 1 Y 1 A TYR 355 ? CD1 ? C TYR 355 CD1 46 1 Y 1 A TYR 355 ? CD2 ? C TYR 355 CD2 47 1 Y 1 A TYR 355 ? CE1 ? C TYR 355 CE1 48 1 Y 1 A TYR 355 ? CE2 ? C TYR 355 CE2 49 1 Y 1 A TYR 355 ? CZ ? C TYR 355 CZ 50 1 Y 1 A TYR 355 ? OH ? C TYR 355 OH 51 1 Y 1 A HIS 367 ? CG ? C HIS 367 CG 52 1 Y 1 A HIS 367 ? ND1 ? C HIS 367 ND1 53 1 Y 1 A HIS 367 ? CD2 ? C HIS 367 CD2 54 1 Y 1 A HIS 367 ? CE1 ? C HIS 367 CE1 55 1 Y 1 A HIS 367 ? NE2 ? C HIS 367 NE2 56 1 Y 1 A VAL 379 ? CG1 ? C VAL 379 CG1 57 1 Y 1 A VAL 379 ? CG2 ? C VAL 379 CG2 58 1 Y 1 A ILE 386 ? CG1 ? C ILE 386 CG1 59 1 Y 1 A ILE 386 ? CG2 ? C ILE 386 CG2 60 1 Y 1 A ILE 386 ? CD1 ? C ILE 386 CD1 61 1 Y 1 A LYS 389 ? CG ? C LYS 389 CG 62 1 Y 1 A LYS 389 ? CD ? C LYS 389 CD 63 1 Y 1 A LYS 389 ? CE ? C LYS 389 CE 64 1 Y 1 A LYS 389 ? NZ ? C LYS 389 NZ 65 1 Y 1 A LEU 405 ? CG ? C LEU 405 CG 66 1 Y 1 A LEU 405 ? CD1 ? C LEU 405 CD1 67 1 Y 1 A LEU 405 ? CD2 ? C LEU 405 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? C MET 1 2 1 Y 1 A GLU 2 ? C GLU 2 3 1 Y 1 A LEU 3 ? C LEU 3 4 1 Y 1 A ALA 4 ? C ALA 4 5 1 Y 1 A ASP 5 ? C ASP 5 6 1 Y 1 A VAL 6 ? C VAL 6 7 1 Y 1 A GLY 7 ? C GLY 7 8 1 Y 1 A ALA 8 ? C ALA 8 9 1 Y 1 A ALA 9 ? C ALA 9 10 1 Y 1 A ALA 10 ? C ALA 10 11 1 Y 1 A SER 11 ? C SER 11 12 1 Y 1 A SER 12 ? C SER 12 13 1 Y 1 A GLN 13 ? C GLN 13 14 1 Y 1 A GLY 14 ? C GLY 14 15 1 Y 1 A VAL 15 ? C VAL 15 16 1 Y 1 A HIS 16 ? C HIS 16 17 1 Y 1 A ASP 17 ? C ASP 17 18 1 Y 1 A GLN 18 ? C GLN 18 19 1 Y 1 A VAL 19 ? C VAL 19 20 1 Y 1 A LEU 20 ? C LEU 20 21 1 Y 1 A PRO 21 ? C PRO 21 22 1 Y 1 A THR 22 ? C THR 22 23 1 Y 1 A PRO 23 ? C PRO 23 24 1 Y 1 A ASN 24 ? C ASN 24 25 1 Y 1 A LYS 371 ? C LYS 371 26 1 Y 1 A LEU 372 ? C LEU 372 27 1 Y 1 A GLY 373 ? C GLY 373 28 1 Y 1 A THR 374 ? C THR 374 29 1 Y 1 A GLY 375 ? C GLY 375 30 1 Y 1 A ASN 376 ? C ASN 376 31 1 Y 1 A TYR 377 ? C TYR 377 32 1 Y 1 A ASP 378 ? C ASP 378 33 1 Y 1 A VAL 395 ? C VAL 395 34 1 Y 1 A ASN 396 ? C ASN 396 35 1 Y 1 A VAL 397 ? C VAL 397 36 1 Y 1 A LYS 398 ? C LYS 398 37 1 Y 1 A MET 399 ? C MET 399 38 1 Y 1 A PRO 400 ? C PRO 400 39 1 Y 1 A PHE 401 ? C PHE 401 40 1 Y 1 A HIS 402 ? C HIS 402 41 1 Y 1 A LEU 403 ? C LEU 403 42 1 Y 1 A ALA 415 ? C ALA 415 43 1 Y 1 A LEU 416 ? C LEU 416 44 1 Y 1 A ASN 417 ? C ASN 417 45 1 Y 1 A THR 418 ? C THR 418 46 1 Y 1 A ALA 419 ? C ALA 419 47 1 Y 1 A LYS 420 ? C LYS 420 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DOC N1 N N N 195 DOC C2 C N N 196 DOC N3 N N N 197 DOC C4 C N N 198 DOC C5 C N N 199 DOC C6 C N N 200 DOC O2 O N N 201 DOC N4 N N N 202 DOC "C1'" C N R 203 DOC "C2'" C N N 204 DOC "C3'" C N N 205 DOC "C4'" C N S 206 DOC "O4'" O N N 207 DOC "C5'" C N N 208 DOC "O5'" O N N 209 DOC P P N N 210 DOC OP1 O N N 211 DOC OP2 O N N 212 DOC OP3 O N N 213 DOC H5 H N N 214 DOC H6 H N N 215 DOC HN41 H N N 216 DOC HN42 H N N 217 DOC "H1'" H N N 218 DOC "H2'" H N N 219 DOC "H2''" H N N 220 DOC "H3'1" H N N 221 DOC "H3'2" H N N 222 DOC "H4'" H N N 223 DOC "H5'" H N N 224 DOC "H5''" H N N 225 DOC HOP2 H N N 226 DOC HOP3 H N N 227 DT OP3 O N N 228 DT P P N N 229 DT OP1 O N N 230 DT OP2 O N N 231 DT "O5'" O N N 232 DT "C5'" C N N 233 DT "C4'" C N R 234 DT "O4'" O N N 235 DT "C3'" C N S 236 DT "O3'" O N N 237 DT "C2'" C N N 238 DT "C1'" C N R 239 DT N1 N N N 240 DT C2 C N N 241 DT O2 O N N 242 DT N3 N N N 243 DT C4 C N N 244 DT O4 O N N 245 DT C5 C N N 246 DT C7 C N N 247 DT C6 C N N 248 DT HOP3 H N N 249 DT HOP2 H N N 250 DT "H5'" H N N 251 DT "H5''" H N N 252 DT "H4'" H N N 253 DT "H3'" H N N 254 DT "HO3'" H N N 255 DT "H2'" H N N 256 DT "H2''" H N N 257 DT "H1'" H N N 258 DT H3 H N N 259 DT H71 H N N 260 DT H72 H N N 261 DT H73 H N N 262 DT H6 H N N 263 EDA P P N N 264 EDA OP1 O N N 265 EDA OP2 O N N 266 EDA OP3 O N N 267 EDA "O5'" O N N 268 EDA N9 N Y N 269 EDA C4 C Y N 270 EDA N3 N Y N 271 EDA C2 C Y N 272 EDA N1 N Y N 273 EDA C6 C Y N 274 EDA C10 C Y N 275 EDA C11 C Y N 276 EDA N6 N Y N 277 EDA C5 C Y N 278 EDA N7 N Y N 279 EDA C8 C Y N 280 EDA "C2'" C N N 281 EDA "C5'" C N N 282 EDA "C4'" C N R 283 EDA "O4'" O N N 284 EDA "C1'" C N R 285 EDA "C3'" C N S 286 EDA "O3'" O N N 287 EDA HOP2 H N N 288 EDA HOP3 H N N 289 EDA H2 H N N 290 EDA H10 H N N 291 EDA H11 H N N 292 EDA H8 H N N 293 EDA "H2'" H N N 294 EDA "H2''" H N N 295 EDA "H5'" H N N 296 EDA "H5''" H N N 297 EDA "H4'" H N N 298 EDA "H1'" H N N 299 EDA "H3'" H N N 300 EDA "HO3'" H N N 301 GLN N N N N 302 GLN CA C N S 303 GLN C C N N 304 GLN O O N N 305 GLN CB C N N 306 GLN CG C N N 307 GLN CD C N N 308 GLN OE1 O N N 309 GLN NE2 N N N 310 GLN OXT O N N 311 GLN H H N N 312 GLN H2 H N N 313 GLN HA H N N 314 GLN HB2 H N N 315 GLN HB3 H N N 316 GLN HG2 H N N 317 GLN HG3 H N N 318 GLN HE21 H N N 319 GLN HE22 H N N 320 GLN HXT H N N 321 GLU N N N N 322 GLU CA C N S 323 GLU C C N N 324 GLU O O N N 325 GLU CB C N N 326 GLU CG C N N 327 GLU CD C N N 328 GLU OE1 O N N 329 GLU OE2 O N N 330 GLU OXT O N N 331 GLU H H N N 332 GLU H2 H N N 333 GLU HA H N N 334 GLU HB2 H N N 335 GLU HB3 H N N 336 GLU HG2 H N N 337 GLU HG3 H N N 338 GLU HE2 H N N 339 GLU HXT H N N 340 GLY N N N N 341 GLY CA C N N 342 GLY C C N N 343 GLY O O N N 344 GLY OXT O N N 345 GLY H H N N 346 GLY H2 H N N 347 GLY HA2 H N N 348 GLY HA3 H N N 349 GLY HXT H N N 350 HIS N N N N 351 HIS CA C N S 352 HIS C C N N 353 HIS O O N N 354 HIS CB C N N 355 HIS CG C Y N 356 HIS ND1 N Y N 357 HIS CD2 C Y N 358 HIS CE1 C Y N 359 HIS NE2 N Y N 360 HIS OXT O N N 361 HIS H H N N 362 HIS H2 H N N 363 HIS HA H N N 364 HIS HB2 H N N 365 HIS HB3 H N N 366 HIS HD1 H N N 367 HIS HD2 H N N 368 HIS HE1 H N N 369 HIS HE2 H N N 370 HIS HXT H N N 371 HOH O O N N 372 HOH H1 H N N 373 HOH H2 H N N 374 ILE N N N N 375 ILE CA C N S 376 ILE C C N N 377 ILE O O N N 378 ILE CB C N S 379 ILE CG1 C N N 380 ILE CG2 C N N 381 ILE CD1 C N N 382 ILE OXT O N N 383 ILE H H N N 384 ILE H2 H N N 385 ILE HA H N N 386 ILE HB H N N 387 ILE HG12 H N N 388 ILE HG13 H N N 389 ILE HG21 H N N 390 ILE HG22 H N N 391 ILE HG23 H N N 392 ILE HD11 H N N 393 ILE HD12 H N N 394 ILE HD13 H N N 395 ILE HXT H N N 396 LEU N N N N 397 LEU CA C N S 398 LEU C C N N 399 LEU O O N N 400 LEU CB C N N 401 LEU CG C N N 402 LEU CD1 C N N 403 LEU CD2 C N N 404 LEU OXT O N N 405 LEU H H N N 406 LEU H2 H N N 407 LEU HA H N N 408 LEU HB2 H N N 409 LEU HB3 H N N 410 LEU HG H N N 411 LEU HD11 H N N 412 LEU HD12 H N N 413 LEU HD13 H N N 414 LEU HD21 H N N 415 LEU HD22 H N N 416 LEU HD23 H N N 417 LEU HXT H N N 418 LYS N N N N 419 LYS CA C N S 420 LYS C C N N 421 LYS O O N N 422 LYS CB C N N 423 LYS CG C N N 424 LYS CD C N N 425 LYS CE C N N 426 LYS NZ N N N 427 LYS OXT O N N 428 LYS H H N N 429 LYS H2 H N N 430 LYS HA H N N 431 LYS HB2 H N N 432 LYS HB3 H N N 433 LYS HG2 H N N 434 LYS HG3 H N N 435 LYS HD2 H N N 436 LYS HD3 H N N 437 LYS HE2 H N N 438 LYS HE3 H N N 439 LYS HZ1 H N N 440 LYS HZ2 H N N 441 LYS HZ3 H N N 442 LYS HXT H N N 443 MET N N N N 444 MET CA C N S 445 MET C C N N 446 MET O O N N 447 MET CB C N N 448 MET CG C N N 449 MET SD S N N 450 MET CE C N N 451 MET OXT O N N 452 MET H H N N 453 MET H2 H N N 454 MET HA H N N 455 MET HB2 H N N 456 MET HB3 H N N 457 MET HG2 H N N 458 MET HG3 H N N 459 MET HE1 H N N 460 MET HE2 H N N 461 MET HE3 H N N 462 MET HXT H N N 463 MG MG MG N N 464 PHE N N N N 465 PHE CA C N S 466 PHE C C N N 467 PHE O O N N 468 PHE CB C N N 469 PHE CG C Y N 470 PHE CD1 C Y N 471 PHE CD2 C Y N 472 PHE CE1 C Y N 473 PHE CE2 C Y N 474 PHE CZ C Y N 475 PHE OXT O N N 476 PHE H H N N 477 PHE H2 H N N 478 PHE HA H N N 479 PHE HB2 H N N 480 PHE HB3 H N N 481 PHE HD1 H N N 482 PHE HD2 H N N 483 PHE HE1 H N N 484 PHE HE2 H N N 485 PHE HZ H N N 486 PHE HXT H N N 487 PRO N N N N 488 PRO CA C N S 489 PRO C C N N 490 PRO O O N N 491 PRO CB C N N 492 PRO CG C N N 493 PRO CD C N N 494 PRO OXT O N N 495 PRO H H N N 496 PRO HA H N N 497 PRO HB2 H N N 498 PRO HB3 H N N 499 PRO HG2 H N N 500 PRO HG3 H N N 501 PRO HD2 H N N 502 PRO HD3 H N N 503 PRO HXT H N N 504 SER N N N N 505 SER CA C N S 506 SER C C N N 507 SER O O N N 508 SER CB C N N 509 SER OG O N N 510 SER OXT O N N 511 SER H H N N 512 SER H2 H N N 513 SER HA H N N 514 SER HB2 H N N 515 SER HB3 H N N 516 SER HG H N N 517 SER HXT H N N 518 THR N N N N 519 THR CA C N S 520 THR C C N N 521 THR O O N N 522 THR CB C N R 523 THR OG1 O N N 524 THR CG2 C N N 525 THR OXT O N N 526 THR H H N N 527 THR H2 H N N 528 THR HA H N N 529 THR HB H N N 530 THR HG1 H N N 531 THR HG21 H N N 532 THR HG22 H N N 533 THR HG23 H N N 534 THR HXT H N N 535 TTP PA P N S 536 TTP O1A O N N 537 TTP O2A O N N 538 TTP O3A O N N 539 TTP PB P N S 540 TTP O1B O N N 541 TTP O2B O N N 542 TTP O3B O N N 543 TTP PG P N N 544 TTP O1G O N N 545 TTP O2G O N N 546 TTP O3G O N N 547 TTP "O5'" O N N 548 TTP "C5'" C N N 549 TTP "C4'" C N R 550 TTP "O4'" O N N 551 TTP "C3'" C N S 552 TTP "O3'" O N N 553 TTP "C2'" C N N 554 TTP "C1'" C N R 555 TTP N1 N N N 556 TTP C2 C N N 557 TTP O2 O N N 558 TTP N3 N N N 559 TTP C4 C N N 560 TTP O4 O N N 561 TTP C5 C N N 562 TTP C5M C N N 563 TTP C6 C N N 564 TTP HOA2 H N N 565 TTP HOB2 H N N 566 TTP HOG2 H N N 567 TTP HOG3 H N N 568 TTP "H5'1" H N N 569 TTP "H5'2" H N N 570 TTP "H4'" H N N 571 TTP "H3'" H N N 572 TTP "HO3'" H N N 573 TTP "H2'1" H N N 574 TTP "H2'2" H N N 575 TTP "H1'" H N N 576 TTP HN3 H N N 577 TTP HM51 H N N 578 TTP HM52 H N N 579 TTP HM53 H N N 580 TTP H6 H N N 581 TYR N N N N 582 TYR CA C N S 583 TYR C C N N 584 TYR O O N N 585 TYR CB C N N 586 TYR CG C Y N 587 TYR CD1 C Y N 588 TYR CD2 C Y N 589 TYR CE1 C Y N 590 TYR CE2 C Y N 591 TYR CZ C Y N 592 TYR OH O N N 593 TYR OXT O N N 594 TYR H H N N 595 TYR H2 H N N 596 TYR HA H N N 597 TYR HB2 H N N 598 TYR HB3 H N N 599 TYR HD1 H N N 600 TYR HD2 H N N 601 TYR HE1 H N N 602 TYR HE2 H N N 603 TYR HH H N N 604 TYR HXT H N N 605 VAL N N N N 606 VAL CA C N S 607 VAL C C N N 608 VAL O O N N 609 VAL CB C N N 610 VAL CG1 C N N 611 VAL CG2 C N N 612 VAL OXT O N N 613 VAL H H N N 614 VAL H2 H N N 615 VAL HA H N N 616 VAL HB H N N 617 VAL HG11 H N N 618 VAL HG12 H N N 619 VAL HG13 H N N 620 VAL HG21 H N N 621 VAL HG22 H N N 622 VAL HG23 H N N 623 VAL HXT H N N 624 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DOC N1 C2 sing N N 195 DOC N1 C6 sing N N 196 DOC N1 "C1'" sing N N 197 DOC C2 N3 sing N N 198 DOC C2 O2 doub N N 199 DOC N3 C4 doub N N 200 DOC C4 C5 sing N N 201 DOC C4 N4 sing N N 202 DOC C5 C6 doub N N 203 DOC C5 H5 sing N N 204 DOC C6 H6 sing N N 205 DOC N4 HN41 sing N N 206 DOC N4 HN42 sing N N 207 DOC "C1'" "C2'" sing N N 208 DOC "C1'" "O4'" sing N N 209 DOC "C1'" "H1'" sing N N 210 DOC "C2'" "C3'" sing N N 211 DOC "C2'" "H2'" sing N N 212 DOC "C2'" "H2''" sing N N 213 DOC "C3'" "C4'" sing N N 214 DOC "C3'" "H3'1" sing N N 215 DOC "C3'" "H3'2" sing N N 216 DOC "C4'" "O4'" sing N N 217 DOC "C4'" "C5'" sing N N 218 DOC "C4'" "H4'" sing N N 219 DOC "C5'" "O5'" sing N N 220 DOC "C5'" "H5'" sing N N 221 DOC "C5'" "H5''" sing N N 222 DOC "O5'" P sing N N 223 DOC P OP1 doub N N 224 DOC P OP2 sing N N 225 DOC P OP3 sing N N 226 DOC OP2 HOP2 sing N N 227 DOC OP3 HOP3 sing N N 228 DT OP3 P sing N N 229 DT OP3 HOP3 sing N N 230 DT P OP1 doub N N 231 DT P OP2 sing N N 232 DT P "O5'" sing N N 233 DT OP2 HOP2 sing N N 234 DT "O5'" "C5'" sing N N 235 DT "C5'" "C4'" sing N N 236 DT "C5'" "H5'" sing N N 237 DT "C5'" "H5''" sing N N 238 DT "C4'" "O4'" sing N N 239 DT "C4'" "C3'" sing N N 240 DT "C4'" "H4'" sing N N 241 DT "O4'" "C1'" sing N N 242 DT "C3'" "O3'" sing N N 243 DT "C3'" "C2'" sing N N 244 DT "C3'" "H3'" sing N N 245 DT "O3'" "HO3'" sing N N 246 DT "C2'" "C1'" sing N N 247 DT "C2'" "H2'" sing N N 248 DT "C2'" "H2''" sing N N 249 DT "C1'" N1 sing N N 250 DT "C1'" "H1'" sing N N 251 DT N1 C2 sing N N 252 DT N1 C6 sing N N 253 DT C2 O2 doub N N 254 DT C2 N3 sing N N 255 DT N3 C4 sing N N 256 DT N3 H3 sing N N 257 DT C4 O4 doub N N 258 DT C4 C5 sing N N 259 DT C5 C7 sing N N 260 DT C5 C6 doub N N 261 DT C7 H71 sing N N 262 DT C7 H72 sing N N 263 DT C7 H73 sing N N 264 DT C6 H6 sing N N 265 EDA P OP1 doub N N 266 EDA P OP2 sing N N 267 EDA P OP3 sing N N 268 EDA P "O5'" sing N N 269 EDA OP2 HOP2 sing N N 270 EDA OP3 HOP3 sing N N 271 EDA "O5'" "C5'" sing N N 272 EDA N9 C4 sing Y N 273 EDA N9 C8 sing Y N 274 EDA N9 "C1'" sing N N 275 EDA C4 N3 sing Y N 276 EDA C4 C5 doub Y N 277 EDA N3 C2 doub Y N 278 EDA C2 N1 sing Y N 279 EDA C2 H2 sing N N 280 EDA N1 C6 sing Y N 281 EDA N1 C10 sing Y N 282 EDA C6 N6 doub Y N 283 EDA C6 C5 sing Y N 284 EDA C10 C11 doub Y N 285 EDA C10 H10 sing N N 286 EDA C11 N6 sing Y N 287 EDA C11 H11 sing N N 288 EDA C5 N7 sing Y N 289 EDA N7 C8 doub Y N 290 EDA C8 H8 sing N N 291 EDA "C2'" "C1'" sing N N 292 EDA "C2'" "C3'" sing N N 293 EDA "C2'" "H2'" sing N N 294 EDA "C2'" "H2''" sing N N 295 EDA "C5'" "C4'" sing N N 296 EDA "C5'" "H5'" sing N N 297 EDA "C5'" "H5''" sing N N 298 EDA "C4'" "O4'" sing N N 299 EDA "C4'" "C3'" sing N N 300 EDA "C4'" "H4'" sing N N 301 EDA "O4'" "C1'" sing N N 302 EDA "C1'" "H1'" sing N N 303 EDA "C3'" "O3'" sing N N 304 EDA "C3'" "H3'" sing N N 305 EDA "O3'" "HO3'" sing N N 306 GLN N CA sing N N 307 GLN N H sing N N 308 GLN N H2 sing N N 309 GLN CA C sing N N 310 GLN CA CB sing N N 311 GLN CA HA sing N N 312 GLN C O doub N N 313 GLN C OXT sing N N 314 GLN CB CG sing N N 315 GLN CB HB2 sing N N 316 GLN CB HB3 sing N N 317 GLN CG CD sing N N 318 GLN CG HG2 sing N N 319 GLN CG HG3 sing N N 320 GLN CD OE1 doub N N 321 GLN CD NE2 sing N N 322 GLN NE2 HE21 sing N N 323 GLN NE2 HE22 sing N N 324 GLN OXT HXT sing N N 325 GLU N CA sing N N 326 GLU N H sing N N 327 GLU N H2 sing N N 328 GLU CA C sing N N 329 GLU CA CB sing N N 330 GLU CA HA sing N N 331 GLU C O doub N N 332 GLU C OXT sing N N 333 GLU CB CG sing N N 334 GLU CB HB2 sing N N 335 GLU CB HB3 sing N N 336 GLU CG CD sing N N 337 GLU CG HG2 sing N N 338 GLU CG HG3 sing N N 339 GLU CD OE1 doub N N 340 GLU CD OE2 sing N N 341 GLU OE2 HE2 sing N N 342 GLU OXT HXT sing N N 343 GLY N CA sing N N 344 GLY N H sing N N 345 GLY N H2 sing N N 346 GLY CA C sing N N 347 GLY CA HA2 sing N N 348 GLY CA HA3 sing N N 349 GLY C O doub N N 350 GLY C OXT sing N N 351 GLY OXT HXT sing N N 352 HIS N CA sing N N 353 HIS N H sing N N 354 HIS N H2 sing N N 355 HIS CA C sing N N 356 HIS CA CB sing N N 357 HIS CA HA sing N N 358 HIS C O doub N N 359 HIS C OXT sing N N 360 HIS CB CG sing N N 361 HIS CB HB2 sing N N 362 HIS CB HB3 sing N N 363 HIS CG ND1 sing Y N 364 HIS CG CD2 doub Y N 365 HIS ND1 CE1 doub Y N 366 HIS ND1 HD1 sing N N 367 HIS CD2 NE2 sing Y N 368 HIS CD2 HD2 sing N N 369 HIS CE1 NE2 sing Y N 370 HIS CE1 HE1 sing N N 371 HIS NE2 HE2 sing N N 372 HIS OXT HXT sing N N 373 HOH O H1 sing N N 374 HOH O H2 sing N N 375 ILE N CA sing N N 376 ILE N H sing N N 377 ILE N H2 sing N N 378 ILE CA C sing N N 379 ILE CA CB sing N N 380 ILE CA HA sing N N 381 ILE C O doub N N 382 ILE C OXT sing N N 383 ILE CB CG1 sing N N 384 ILE CB CG2 sing N N 385 ILE CB HB sing N N 386 ILE CG1 CD1 sing N N 387 ILE CG1 HG12 sing N N 388 ILE CG1 HG13 sing N N 389 ILE CG2 HG21 sing N N 390 ILE CG2 HG22 sing N N 391 ILE CG2 HG23 sing N N 392 ILE CD1 HD11 sing N N 393 ILE CD1 HD12 sing N N 394 ILE CD1 HD13 sing N N 395 ILE OXT HXT sing N N 396 LEU N CA sing N N 397 LEU N H sing N N 398 LEU N H2 sing N N 399 LEU CA C sing N N 400 LEU CA CB sing N N 401 LEU CA HA sing N N 402 LEU C O doub N N 403 LEU C OXT sing N N 404 LEU CB CG sing N N 405 LEU CB HB2 sing N N 406 LEU CB HB3 sing N N 407 LEU CG CD1 sing N N 408 LEU CG CD2 sing N N 409 LEU CG HG sing N N 410 LEU CD1 HD11 sing N N 411 LEU CD1 HD12 sing N N 412 LEU CD1 HD13 sing N N 413 LEU CD2 HD21 sing N N 414 LEU CD2 HD22 sing N N 415 LEU CD2 HD23 sing N N 416 LEU OXT HXT sing N N 417 LYS N CA sing N N 418 LYS N H sing N N 419 LYS N H2 sing N N 420 LYS CA C sing N N 421 LYS CA CB sing N N 422 LYS CA HA sing N N 423 LYS C O doub N N 424 LYS C OXT sing N N 425 LYS CB CG sing N N 426 LYS CB HB2 sing N N 427 LYS CB HB3 sing N N 428 LYS CG CD sing N N 429 LYS CG HG2 sing N N 430 LYS CG HG3 sing N N 431 LYS CD CE sing N N 432 LYS CD HD2 sing N N 433 LYS CD HD3 sing N N 434 LYS CE NZ sing N N 435 LYS CE HE2 sing N N 436 LYS CE HE3 sing N N 437 LYS NZ HZ1 sing N N 438 LYS NZ HZ2 sing N N 439 LYS NZ HZ3 sing N N 440 LYS OXT HXT sing N N 441 MET N CA sing N N 442 MET N H sing N N 443 MET N H2 sing N N 444 MET CA C sing N N 445 MET CA CB sing N N 446 MET CA HA sing N N 447 MET C O doub N N 448 MET C OXT sing N N 449 MET CB CG sing N N 450 MET CB HB2 sing N N 451 MET CB HB3 sing N N 452 MET CG SD sing N N 453 MET CG HG2 sing N N 454 MET CG HG3 sing N N 455 MET SD CE sing N N 456 MET CE HE1 sing N N 457 MET CE HE2 sing N N 458 MET CE HE3 sing N N 459 MET OXT HXT sing N N 460 PHE N CA sing N N 461 PHE N H sing N N 462 PHE N H2 sing N N 463 PHE CA C sing N N 464 PHE CA CB sing N N 465 PHE CA HA sing N N 466 PHE C O doub N N 467 PHE C OXT sing N N 468 PHE CB CG sing N N 469 PHE CB HB2 sing N N 470 PHE CB HB3 sing N N 471 PHE CG CD1 doub Y N 472 PHE CG CD2 sing Y N 473 PHE CD1 CE1 sing Y N 474 PHE CD1 HD1 sing N N 475 PHE CD2 CE2 doub Y N 476 PHE CD2 HD2 sing N N 477 PHE CE1 CZ doub Y N 478 PHE CE1 HE1 sing N N 479 PHE CE2 CZ sing Y N 480 PHE CE2 HE2 sing N N 481 PHE CZ HZ sing N N 482 PHE OXT HXT sing N N 483 PRO N CA sing N N 484 PRO N CD sing N N 485 PRO N H sing N N 486 PRO CA C sing N N 487 PRO CA CB sing N N 488 PRO CA HA sing N N 489 PRO C O doub N N 490 PRO C OXT sing N N 491 PRO CB CG sing N N 492 PRO CB HB2 sing N N 493 PRO CB HB3 sing N N 494 PRO CG CD sing N N 495 PRO CG HG2 sing N N 496 PRO CG HG3 sing N N 497 PRO CD HD2 sing N N 498 PRO CD HD3 sing N N 499 PRO OXT HXT sing N N 500 SER N CA sing N N 501 SER N H sing N N 502 SER N H2 sing N N 503 SER CA C sing N N 504 SER CA CB sing N N 505 SER CA HA sing N N 506 SER C O doub N N 507 SER C OXT sing N N 508 SER CB OG sing N N 509 SER CB HB2 sing N N 510 SER CB HB3 sing N N 511 SER OG HG sing N N 512 SER OXT HXT sing N N 513 THR N CA sing N N 514 THR N H sing N N 515 THR N H2 sing N N 516 THR CA C sing N N 517 THR CA CB sing N N 518 THR CA HA sing N N 519 THR C O doub N N 520 THR C OXT sing N N 521 THR CB OG1 sing N N 522 THR CB CG2 sing N N 523 THR CB HB sing N N 524 THR OG1 HG1 sing N N 525 THR CG2 HG21 sing N N 526 THR CG2 HG22 sing N N 527 THR CG2 HG23 sing N N 528 THR OXT HXT sing N N 529 TTP PA O1A doub N N 530 TTP PA O2A sing N N 531 TTP PA O3A sing N N 532 TTP PA "O5'" sing N N 533 TTP O2A HOA2 sing N N 534 TTP O3A PB sing N N 535 TTP PB O1B doub N N 536 TTP PB O2B sing N N 537 TTP PB O3B sing N N 538 TTP O2B HOB2 sing N N 539 TTP O3B PG sing N N 540 TTP PG O1G doub N N 541 TTP PG O2G sing N N 542 TTP PG O3G sing N N 543 TTP O2G HOG2 sing N N 544 TTP O3G HOG3 sing N N 545 TTP "O5'" "C5'" sing N N 546 TTP "C5'" "C4'" sing N N 547 TTP "C5'" "H5'1" sing N N 548 TTP "C5'" "H5'2" sing N N 549 TTP "C4'" "O4'" sing N N 550 TTP "C4'" "C3'" sing N N 551 TTP "C4'" "H4'" sing N N 552 TTP "O4'" "C1'" sing N N 553 TTP "C3'" "O3'" sing N N 554 TTP "C3'" "C2'" sing N N 555 TTP "C3'" "H3'" sing N N 556 TTP "O3'" "HO3'" sing N N 557 TTP "C2'" "C1'" sing N N 558 TTP "C2'" "H2'1" sing N N 559 TTP "C2'" "H2'2" sing N N 560 TTP "C1'" N1 sing N N 561 TTP "C1'" "H1'" sing N N 562 TTP N1 C2 sing N N 563 TTP N1 C6 sing N N 564 TTP C2 O2 doub N N 565 TTP C2 N3 sing N N 566 TTP N3 C4 sing N N 567 TTP N3 HN3 sing N N 568 TTP C4 O4 doub N N 569 TTP C4 C5 sing N N 570 TTP C5 C5M sing N N 571 TTP C5 C6 doub N N 572 TTP C5M HM51 sing N N 573 TTP C5M HM52 sing N N 574 TTP C5M HM53 sing N N 575 TTP C6 H6 sing N N 576 TYR N CA sing N N 577 TYR N H sing N N 578 TYR N H2 sing N N 579 TYR CA C sing N N 580 TYR CA CB sing N N 581 TYR CA HA sing N N 582 TYR C O doub N N 583 TYR C OXT sing N N 584 TYR CB CG sing N N 585 TYR CB HB2 sing N N 586 TYR CB HB3 sing N N 587 TYR CG CD1 doub Y N 588 TYR CG CD2 sing Y N 589 TYR CD1 CE1 sing Y N 590 TYR CD1 HD1 sing N N 591 TYR CD2 CE2 doub Y N 592 TYR CD2 HD2 sing N N 593 TYR CE1 CZ doub Y N 594 TYR CE1 HE1 sing N N 595 TYR CE2 CZ sing Y N 596 TYR CE2 HE2 sing N N 597 TYR CZ OH sing N N 598 TYR OH HH sing N N 599 TYR OXT HXT sing N N 600 VAL N CA sing N N 601 VAL N H sing N N 602 VAL N H2 sing N N 603 VAL CA C sing N N 604 VAL CA CB sing N N 605 VAL CA HA sing N N 606 VAL C O doub N N 607 VAL C OXT sing N N 608 VAL CB CG1 sing N N 609 VAL CB CG2 sing N N 610 VAL CB HB sing N N 611 VAL CG1 HG11 sing N N 612 VAL CG1 HG12 sing N N 613 VAL CG1 HG13 sing N N 614 VAL CG2 HG21 sing N N 615 VAL CG2 HG22 sing N N 616 VAL CG2 HG23 sing N N 617 VAL OXT HXT sing N N 618 # _ndb_struct_conf_na.entry_id 2DPJ _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 9 1_555 0.017 -0.238 -0.408 4.306 -3.987 -0.767 1 P_DA867:DT847_T P 867 ? T 847 ? 20 1 1 A DG 2 1_555 B DC 8 1_555 -0.080 -0.063 -0.219 9.004 -1.699 1.578 2 P_DG868:DC846_T P 868 ? T 846 ? 19 1 1 A DG 3 1_555 B DC 7 1_555 -0.060 -0.027 -0.487 -1.452 -4.511 0.030 3 P_DG869:DC845_T P 869 ? T 845 ? 19 1 1 A DA 4 1_555 B DT 6 1_555 0.133 -0.132 -0.145 10.614 -6.062 -3.162 4 P_DA870:DT844_T P 870 ? T 844 ? 20 1 1 A DC 5 1_555 B DG 5 1_555 -0.007 -0.145 -0.466 14.421 -9.306 -2.490 5 P_DC871:DG843_T P 871 ? T 843 ? 19 1 1 A DC 6 1_555 B DG 4 1_555 0.064 -0.157 -0.242 4.880 -11.261 -1.389 6 P_DC872:DG842_T P 872 ? T 842 ? 19 1 1 A DOC 7 1_555 B DG 3 1_555 0.142 -0.217 -0.157 -3.951 -1.469 -1.800 7 P_DOC873:DG841_T P 873 ? T 841 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 9 1_555 A DG 2 1_555 B DC 8 1_555 0.636 -0.392 3.221 -1.040 2.435 29.026 -1.298 -1.487 3.154 4.846 2.070 29.144 1 PP_DA867DG868:DC846DT847_TT P 867 ? T 847 ? P 868 ? T 846 ? 1 A DG 2 1_555 B DC 8 1_555 A DG 3 1_555 B DC 7 1_555 0.088 -0.672 3.726 3.197 0.033 36.661 -1.070 0.356 3.720 0.053 -5.071 36.795 2 PP_DG868DG869:DC845DC846_TT P 868 ? T 846 ? P 869 ? T 845 ? 1 A DG 3 1_555 B DC 7 1_555 A DA 4 1_555 B DT 6 1_555 -0.021 -0.342 3.096 -3.216 5.598 29.766 -1.700 -0.563 2.969 10.738 6.169 30.443 3 PP_DG869DA870:DT844DC845_TT P 869 ? T 845 ? P 870 ? T 844 ? 1 A DA 4 1_555 B DT 6 1_555 A DC 5 1_555 B DG 5 1_555 0.664 -1.060 3.168 -0.264 3.941 32.160 -2.559 -1.234 3.015 7.080 0.475 32.396 4 PP_DA870DC871:DG843DT844_TT P 870 ? T 844 ? P 871 ? T 843 ? 1 A DC 5 1_555 B DG 5 1_555 A DC 6 1_555 B DG 4 1_555 -0.410 -1.527 3.662 -3.189 10.271 30.206 -4.720 0.137 3.021 18.969 5.890 32.022 5 PP_DC871DC872:DG842DG843_TT P 871 ? T 843 ? P 872 ? T 842 ? 1 A DC 6 1_555 B DG 4 1_555 A DOC 7 1_555 B DG 3 1_555 -0.450 -1.433 3.676 0.281 3.199 26.536 -4.012 1.054 3.477 6.936 -0.609 26.726 6 PP_DC872DOC873:DG841DG842_TT P 872 ? T 842 ? P 873 ? T 841 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 "THYMIDINE-5'-TRIPHOSPHATE" TTP 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ALZ _pdbx_initial_refinement_model.details 'PDB entry 2ALZ' #