data_2G8V # _entry.id 2G8V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2G8V pdb_00002g8v 10.2210/pdb2g8v/pdb NDB PH0024 ? ? RCSB RCSB036834 ? ? WWPDB D_1000036834 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1ZBF . unspecified PDB 1ZBI . unspecified PDB 1ZBL . unspecified PDB 2G8F . unspecified PDB 2G8H . unspecified PDB 2G8I . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2G8V _pdbx_database_status.recvd_initial_deposition_date 2006-03-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nowotny, M.' 1 'Yang, W.' 2 # _citation.id primary _citation.title 'Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 25 _citation.page_first 1924 _citation.page_last 1933 _citation.year 2006 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16601679 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7601076 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nowotny, M.' 1 ? primary 'Yang, W.' 2 ? # _cell.entry_id 2G8V _cell.length_a 81.871 _cell.length_b 36.809 _cell.length_c 62.144 _cell.angle_alpha 90.00 _cell.angle_beta 97.17 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2G8V _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(P*UP*CP*GP*AP*CP*A)-3'" 1875.189 1 ? ? ? ? 2 polymer syn "5'-D(*AP*TP*GP*TP*CP*G)-3'" 1824.228 1 ? ? ? ? 3 polymer man 'Ribonuclease H' 16272.427 1 3.1.26.4 E188A 'Bh-RNase HC' ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn ETHANOL 46.068 2 ? ? ? ? 6 water nat water 18.015 159 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'RNase H' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no UCGACA UCGACA B ? 2 polydeoxyribonucleotide no no '(DA)(DT)(DG)(DT)(DC)(DG)' ATGTCG C ? 3 'polypeptide(L)' no no ;GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGAIKADYGRK ; ;GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGAIKADYGRK ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 C n 1 3 G n 1 4 A n 1 5 C n 1 6 A n 2 1 DA n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DC n 2 6 DG n 3 1 GLY n 3 2 SER n 3 3 HIS n 3 4 MET n 3 5 ALA n 3 6 LYS n 3 7 GLU n 3 8 GLU n 3 9 ILE n 3 10 ILE n 3 11 TRP n 3 12 GLU n 3 13 SER n 3 14 LEU n 3 15 SER n 3 16 VAL n 3 17 ASP n 3 18 VAL n 3 19 GLY n 3 20 SER n 3 21 GLN n 3 22 GLY n 3 23 ASN n 3 24 PRO n 3 25 GLY n 3 26 ILE n 3 27 VAL n 3 28 GLU n 3 29 TYR n 3 30 LYS n 3 31 GLY n 3 32 VAL n 3 33 ASP n 3 34 THR n 3 35 LYS n 3 36 THR n 3 37 GLY n 3 38 GLU n 3 39 VAL n 3 40 LEU n 3 41 PHE n 3 42 GLU n 3 43 ARG n 3 44 GLU n 3 45 PRO n 3 46 ILE n 3 47 PRO n 3 48 ILE n 3 49 GLY n 3 50 THR n 3 51 ASN n 3 52 ASN n 3 53 MET n 3 54 GLY n 3 55 GLU n 3 56 PHE n 3 57 LEU n 3 58 ALA n 3 59 ILE n 3 60 VAL n 3 61 HIS n 3 62 GLY n 3 63 LEU n 3 64 ARG n 3 65 TYR n 3 66 LEU n 3 67 LYS n 3 68 GLU n 3 69 ARG n 3 70 ASN n 3 71 SER n 3 72 ARG n 3 73 LYS n 3 74 PRO n 3 75 ILE n 3 76 TYR n 3 77 SER n 3 78 ASP n 3 79 SER n 3 80 GLN n 3 81 THR n 3 82 ALA n 3 83 ILE n 3 84 LYS n 3 85 TRP n 3 86 VAL n 3 87 LYS n 3 88 ASP n 3 89 LYS n 3 90 LYS n 3 91 ALA n 3 92 LYS n 3 93 SER n 3 94 THR n 3 95 LEU n 3 96 VAL n 3 97 ARG n 3 98 ASN n 3 99 GLU n 3 100 GLU n 3 101 THR n 3 102 ALA n 3 103 LEU n 3 104 ILE n 3 105 TRP n 3 106 LYS n 3 107 LEU n 3 108 VAL n 3 109 ASP n 3 110 GLU n 3 111 ALA n 3 112 GLU n 3 113 GLU n 3 114 TRP n 3 115 LEU n 3 116 ASN n 3 117 THR n 3 118 HIS n 3 119 THR n 3 120 TYR n 3 121 GLU n 3 122 THR n 3 123 PRO n 3 124 ILE n 3 125 LEU n 3 126 LYS n 3 127 TRP n 3 128 GLN n 3 129 THR n 3 130 ASP n 3 131 LYS n 3 132 TRP n 3 133 GLY n 3 134 ALA n 3 135 ILE n 3 136 LYS n 3 137 ALA n 3 138 ASP n 3 139 TYR n 3 140 GLY n 3 141 ARG n 3 142 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene rnhA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus halodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 86665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector pET15b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RNH1_BACHD Q9KEI9 3 ;AKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQTAIK WVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK ; 59 ? 2 PDB 2G8V 2G8V 1 ? ? ? 3 PDB 2G8V 2G8V 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2G8V A 5 ? 142 ? Q9KEI9 59 ? 196 ? 59 196 2 2 2G8V B 1 ? 6 ? 2G8V 1 ? 6 ? 1 6 3 3 2G8V C 1 ? 6 ? 2G8V 1 ? 6 ? 1 6 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2G8V GLY A 1 ? UNP Q9KEI9 ? ? 'cloning artifact' 55 1 1 2G8V SER A 2 ? UNP Q9KEI9 ? ? 'cloning artifact' 56 2 1 2G8V HIS A 3 ? UNP Q9KEI9 ? ? 'cloning artifact' 57 3 1 2G8V MET A 4 ? UNP Q9KEI9 ? ? 'cloning artifact' 58 4 1 2G8V ALA A 134 ? UNP Q9KEI9 GLU 188 'engineered mutation' 188 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2G8V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_percent_sol 46.93 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '20% EtOH, 0.1 M Tris pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 278K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 EtOH ? ? ? 1 2 1 Tris ? ? ? 1 3 1 H2O ? ? ? 1 4 2 EtOH ? ? ? 1 5 2 Tris ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2005-03-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2G8V _reflns.observed_criterion_sigma_I 2.4 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.85 _reflns.number_obs 14810 _reflns.number_all 15940 _reflns.percent_possible_obs 92.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.92 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2G8V _refine.ls_number_reflns_obs 14810 _refine.ls_number_reflns_all 15940 _refine.pdbx_ls_sigma_I 2.4 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.198 _refine.ls_R_factor_R_free 0.24 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1504 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1ZBI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1077 _refine_hist.pdbx_number_atoms_nucleic_acid 287 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 1531 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.13 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2G8V _struct.title 'B. halodurans RNase H catalytic domain E188A mutant in complex with Mg2+ and RNA/DNA hybrid (reaction product)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2G8V _struct_keywords.pdbx_keywords HYDROLASE/RNA/DNA _struct_keywords.text 'RNase H, Ribonuclease H, RNA/DNA hybrid, HYDROLASE-RNA-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 50 ? ARG C 69 ? THR A 104 ARG A 123 1 ? 20 HELX_P HELX_P2 2 SER C 79 ? LYS C 89 ? SER A 133 LYS A 143 1 ? 11 HELX_P HELX_P3 3 ASN C 98 ? GLU C 100 ? ASN A 152 GLU A 154 5 ? 3 HELX_P HELX_P4 4 THR C 101 ? HIS C 118 ? THR A 155 HIS A 172 1 ? 18 HELX_P HELX_P5 5 GLN C 128 ? GLY C 133 ? GLN A 182 GLY A 187 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A A 6 "O3'" ? ? ? 1_555 D MG . MG ? ? B A 6 A MG 401 1_555 ? ? ? ? ? ? ? 2.641 ? ? metalc2 metalc ? ? H HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 7 A MG 402 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc3 metalc ? ? C ASP 17 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 71 A MG 401 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc4 metalc ? ? C GLU 55 OE2 ? ? ? 1_555 D MG . MG ? ? A GLU 109 A MG 401 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc5 metalc ? ? C ASP 78 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 132 A MG 401 1_555 ? ? ? ? ? ? ? 2.656 ? ? metalc6 metalc ? ? C ASP 138 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 192 A MG 402 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 401 A HOH 506 1_555 ? ? ? ? ? ? ? 2.649 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 401 A HOH 537 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 402 A HOH 503 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 402 A HOH 505 1_555 ? ? ? ? ? ? ? 2.270 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 402 A HOH 506 1_555 ? ? ? ? ? ? ? 2.436 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 402 A HOH 507 1_555 ? ? ? ? ? ? ? 2.291 ? ? hydrog1 hydrog ? ? A C 2 N3 ? ? ? 1_555 B DG 6 N1 ? ? B C 2 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 2 N4 ? ? ? 1_555 B DG 6 O6 ? ? B C 2 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 O2 ? ? ? 1_555 B DG 6 N2 ? ? B C 2 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 3 N1 ? ? ? 1_555 B DC 5 N3 ? ? B G 3 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 3 N2 ? ? ? 1_555 B DC 5 O2 ? ? B G 3 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 O6 ? ? ? 1_555 B DC 5 N4 ? ? B G 3 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 4 N1 ? ? ? 1_555 B DT 4 N3 ? ? B A 4 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 4 N6 ? ? ? 1_555 B DT 4 O4 ? ? B A 4 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 5 N3 ? ? ? 1_555 B DG 3 N1 ? ? B C 5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 5 N4 ? ? ? 1_555 B DG 3 O6 ? ? B C 5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 O2 ? ? ? 1_555 B DG 3 N2 ? ? B C 5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 6 N1 ? ? ? 1_555 B DT 2 N3 A ? B A 6 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N6 ? ? ? 1_555 B DT 2 O4 A ? B A 6 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 23 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 77 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 24 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 78 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.30 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 39 ? GLY C 49 ? VAL A 93 GLY A 103 A 2 GLY C 25 ? ASP C 33 ? GLY A 79 ASP A 87 A 3 LEU C 14 ? GLN C 21 ? LEU A 68 GLN A 75 A 4 ILE C 75 ? SER C 77 ? ILE A 129 SER A 131 A 5 ILE C 124 ? LYS C 126 ? ILE A 178 LYS A 180 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE C 46 ? O ILE A 100 N VAL C 27 ? N VAL A 81 A 2 3 O GLU C 28 ? O GLU A 82 N GLY C 19 ? N GLY A 73 A 3 4 N LEU C 14 ? N LEU A 68 O TYR C 76 ? O TYR A 130 A 4 5 N ILE C 75 ? N ILE A 129 O LEU C 125 ? O LEU A 179 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 6 'BINDING SITE FOR RESIDUE MG A 401' AC2 Software A MG 402 ? 7 'BINDING SITE FOR RESIDUE MG A 402' AC3 Software A EOH 501 ? 4 'BINDING SITE FOR RESIDUE EOH A 501' AC4 Software A EOH 502 ? 4 'BINDING SITE FOR RESIDUE EOH A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP C 17 ? ASP A 71 . ? 1_555 ? 2 AC1 6 GLU C 55 ? GLU A 109 . ? 1_555 ? 3 AC1 6 ASP C 78 ? ASP A 132 . ? 1_555 ? 4 AC1 6 HOH J . ? HOH A 506 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH A 537 . ? 1_555 ? 6 AC1 6 A A 6 ? A B 6 . ? 1_555 ? 7 AC2 7 ASP C 138 ? ASP A 192 . ? 1_555 ? 8 AC2 7 HOH J . ? HOH A 503 . ? 1_555 ? 9 AC2 7 HOH J . ? HOH A 505 . ? 1_555 ? 10 AC2 7 HOH J . ? HOH A 506 . ? 1_555 ? 11 AC2 7 HOH J . ? HOH A 507 . ? 1_555 ? 12 AC2 7 U A 1 ? U B 1 . ? 4_546 ? 13 AC2 7 HOH H . ? HOH B 7 . ? 1_555 ? 14 AC3 4 GLN C 80 ? GLN A 134 . ? 1_555 ? 15 AC3 4 LYS C 126 ? LYS A 180 . ? 1_555 ? 16 AC3 4 HOH J . ? HOH A 520 . ? 1_555 ? 17 AC3 4 HOH J . ? HOH A 620 . ? 1_555 ? 18 AC4 4 GLU C 12 ? GLU A 66 . ? 1_555 ? 19 AC4 4 LYS C 35 ? LYS A 89 . ? 1_555 ? 20 AC4 4 LYS C 73 ? LYS A 127 . ? 1_555 ? 21 AC4 4 HOH J . ? HOH A 614 . ? 1_555 ? # _database_PDB_matrix.entry_id 2G8V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2G8V _atom_sites.fract_transf_matrix[1][1] 0.012214 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001537 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027167 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016218 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U URI B . n A 1 2 C 2 2 2 C CYT B . n A 1 3 G 3 3 3 G GUA B . n A 1 4 A 4 4 4 A ADE B . n A 1 5 C 5 5 5 C CYT B . n A 1 6 A 6 6 6 A ADE B . n B 2 1 DA 1 1 1 DA ADE C . n B 2 2 DT 2 2 2 DT THY C . n B 2 3 DG 3 3 3 DG GUA C . n B 2 4 DT 4 4 4 DT THY C . n B 2 5 DC 5 5 5 DC CYT C . n B 2 6 DG 6 6 6 DG GUA C . n C 3 1 GLY 1 55 ? ? ? A . n C 3 2 SER 2 56 ? ? ? A . n C 3 3 HIS 3 57 ? ? ? A . n C 3 4 MET 4 58 ? ? ? A . n C 3 5 ALA 5 59 ? ? ? A . n C 3 6 LYS 6 60 ? ? ? A . n C 3 7 GLU 7 61 61 GLU ALA A . n C 3 8 GLU 8 62 62 GLU GLU A . n C 3 9 ILE 9 63 63 ILE ILE A . n C 3 10 ILE 10 64 64 ILE ILE A . n C 3 11 TRP 11 65 65 TRP TRP A . n C 3 12 GLU 12 66 66 GLU GLU A . n C 3 13 SER 13 67 67 SER SER A . n C 3 14 LEU 14 68 68 LEU LEU A . n C 3 15 SER 15 69 69 SER SER A . n C 3 16 VAL 16 70 70 VAL VAL A . n C 3 17 ASP 17 71 71 ASP ASP A . n C 3 18 VAL 18 72 72 VAL VAL A . n C 3 19 GLY 19 73 73 GLY GLY A . n C 3 20 SER 20 74 74 SER SER A . n C 3 21 GLN 21 75 75 GLN GLN A . n C 3 22 GLY 22 76 76 GLY GLY A . n C 3 23 ASN 23 77 77 ASN ASN A . n C 3 24 PRO 24 78 78 PRO PRO A . n C 3 25 GLY 25 79 79 GLY GLY A . n C 3 26 ILE 26 80 80 ILE ILE A . n C 3 27 VAL 27 81 81 VAL VAL A . n C 3 28 GLU 28 82 82 GLU GLU A . n C 3 29 TYR 29 83 83 TYR TYR A . n C 3 30 LYS 30 84 84 LYS LYS A . n C 3 31 GLY 31 85 85 GLY GLY A . n C 3 32 VAL 32 86 86 VAL VAL A . n C 3 33 ASP 33 87 87 ASP ASP A . n C 3 34 THR 34 88 88 THR THR A . n C 3 35 LYS 35 89 89 LYS LYS A . n C 3 36 THR 36 90 90 THR THR A . n C 3 37 GLY 37 91 91 GLY GLY A . n C 3 38 GLU 38 92 92 GLU GLU A . n C 3 39 VAL 39 93 93 VAL VAL A . n C 3 40 LEU 40 94 94 LEU LEU A . n C 3 41 PHE 41 95 95 PHE PHE A . n C 3 42 GLU 42 96 96 GLU GLU A . n C 3 43 ARG 43 97 97 ARG ARG A . n C 3 44 GLU 44 98 98 GLU GLU A . n C 3 45 PRO 45 99 99 PRO PRO A . n C 3 46 ILE 46 100 100 ILE ILE A . n C 3 47 PRO 47 101 101 PRO PRO A . n C 3 48 ILE 48 102 102 ILE ILE A . n C 3 49 GLY 49 103 103 GLY GLY A . n C 3 50 THR 50 104 104 THR THR A . n C 3 51 ASN 51 105 105 ASN ASN A . n C 3 52 ASN 52 106 106 ASN ASN A . n C 3 53 MET 53 107 107 MET MET A . n C 3 54 GLY 54 108 108 GLY GLY A . n C 3 55 GLU 55 109 109 GLU GLU A . n C 3 56 PHE 56 110 110 PHE PHE A . n C 3 57 LEU 57 111 111 LEU LEU A . n C 3 58 ALA 58 112 112 ALA ALA A . n C 3 59 ILE 59 113 113 ILE ILE A . n C 3 60 VAL 60 114 114 VAL VAL A . n C 3 61 HIS 61 115 115 HIS HIS A . n C 3 62 GLY 62 116 116 GLY GLY A . n C 3 63 LEU 63 117 117 LEU LEU A . n C 3 64 ARG 64 118 118 ARG ARG A . n C 3 65 TYR 65 119 119 TYR TYR A . n C 3 66 LEU 66 120 120 LEU LEU A . n C 3 67 LYS 67 121 121 LYS LYS A . n C 3 68 GLU 68 122 122 GLU GLU A . n C 3 69 ARG 69 123 123 ARG ARG A . n C 3 70 ASN 70 124 124 ASN ASN A . n C 3 71 SER 71 125 125 SER SER A . n C 3 72 ARG 72 126 126 ARG ARG A . n C 3 73 LYS 73 127 127 LYS LYS A . n C 3 74 PRO 74 128 128 PRO PRO A . n C 3 75 ILE 75 129 129 ILE ILE A . n C 3 76 TYR 76 130 130 TYR TYR A . n C 3 77 SER 77 131 131 SER SER A . n C 3 78 ASP 78 132 132 ASP ASP A . n C 3 79 SER 79 133 133 SER SER A . n C 3 80 GLN 80 134 134 GLN GLN A . n C 3 81 THR 81 135 135 THR THR A . n C 3 82 ALA 82 136 136 ALA ALA A . n C 3 83 ILE 83 137 137 ILE ILE A . n C 3 84 LYS 84 138 138 LYS LYS A . n C 3 85 TRP 85 139 139 TRP TRP A . n C 3 86 VAL 86 140 140 VAL VAL A . n C 3 87 LYS 87 141 141 LYS LYS A . n C 3 88 ASP 88 142 142 ASP ASP A . n C 3 89 LYS 89 143 143 LYS LYS A . n C 3 90 LYS 90 144 144 LYS LYS A . n C 3 91 ALA 91 145 145 ALA ALA A . n C 3 92 LYS 92 146 146 LYS LYS A . n C 3 93 SER 93 147 147 SER SER A . n C 3 94 THR 94 148 148 THR THR A . n C 3 95 LEU 95 149 149 LEU LEU A . n C 3 96 VAL 96 150 150 VAL VAL A . n C 3 97 ARG 97 151 151 ARG ARG A . n C 3 98 ASN 98 152 152 ASN ASN A . n C 3 99 GLU 99 153 153 GLU GLU A . n C 3 100 GLU 100 154 154 GLU GLU A . n C 3 101 THR 101 155 155 THR THR A . n C 3 102 ALA 102 156 156 ALA ALA A . n C 3 103 LEU 103 157 157 LEU LEU A . n C 3 104 ILE 104 158 158 ILE ILE A . n C 3 105 TRP 105 159 159 TRP TRP A . n C 3 106 LYS 106 160 160 LYS LYS A . n C 3 107 LEU 107 161 161 LEU LEU A . n C 3 108 VAL 108 162 162 VAL VAL A . n C 3 109 ASP 109 163 163 ASP ASP A . n C 3 110 GLU 110 164 164 GLU GLU A . n C 3 111 ALA 111 165 165 ALA ALA A . n C 3 112 GLU 112 166 166 GLU GLU A . n C 3 113 GLU 113 167 167 GLU GLU A . n C 3 114 TRP 114 168 168 TRP TRP A . n C 3 115 LEU 115 169 169 LEU LEU A . n C 3 116 ASN 116 170 170 ASN ASN A . n C 3 117 THR 117 171 171 THR THR A . n C 3 118 HIS 118 172 172 HIS HIS A . n C 3 119 THR 119 173 173 THR THR A . n C 3 120 TYR 120 174 174 TYR TYR A . n C 3 121 GLU 121 175 175 GLU GLU A . n C 3 122 THR 122 176 176 THR THR A . n C 3 123 PRO 123 177 177 PRO PRO A . n C 3 124 ILE 124 178 178 ILE ILE A . n C 3 125 LEU 125 179 179 LEU LEU A . n C 3 126 LYS 126 180 180 LYS LYS A . n C 3 127 TRP 127 181 181 TRP TRP A . n C 3 128 GLN 128 182 182 GLN GLN A . n C 3 129 THR 129 183 183 THR THR A . n C 3 130 ASP 130 184 184 ASP ASP A . n C 3 131 LYS 131 185 185 LYS LYS A . n C 3 132 TRP 132 186 186 TRP TRP A . n C 3 133 GLY 133 187 187 GLY GLY A . n C 3 134 ALA 134 188 188 ALA ALA A . n C 3 135 ILE 135 189 189 ILE ILE A . n C 3 136 LYS 136 190 190 LYS LYS A . n C 3 137 ALA 137 191 191 ALA ALA A . n C 3 138 ASP 138 192 192 ASP ASP A . n C 3 139 TYR 139 193 193 TYR TYR A . n C 3 140 GLY 140 194 ? ? ? A . n C 3 141 ARG 141 195 ? ? ? A . n C 3 142 LYS 142 196 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 401 1 MG MG2 A . E 4 MG 1 402 2 MG MG2 A . F 5 EOH 1 501 1 EOH EOH A . G 5 EOH 1 502 2 EOH EOH A . H 6 HOH 1 7 7 HOH HOH B . H 6 HOH 2 28 28 HOH HOH B . H 6 HOH 3 36 36 HOH HOH B . H 6 HOH 4 48 48 HOH HOH B . H 6 HOH 5 67 67 HOH HOH B . H 6 HOH 6 72 72 HOH HOH B . H 6 HOH 7 88 88 HOH HOH B . H 6 HOH 8 89 89 HOH HOH B . H 6 HOH 9 129 129 HOH HOH B . I 6 HOH 1 27 27 HOH HOH C . I 6 HOH 2 32 32 HOH HOH C . I 6 HOH 3 38 38 HOH HOH C . I 6 HOH 4 44 44 HOH HOH C . I 6 HOH 5 45 45 HOH HOH C . I 6 HOH 6 46 46 HOH HOH C . I 6 HOH 7 49 49 HOH HOH C . I 6 HOH 8 58 58 HOH HOH C . I 6 HOH 9 60 60 HOH HOH C . I 6 HOH 10 74 74 HOH HOH C . I 6 HOH 11 91 91 HOH HOH C . I 6 HOH 12 107 107 HOH HOH C . I 6 HOH 13 114 114 HOH HOH C . I 6 HOH 14 116 116 HOH HOH C . I 6 HOH 15 121 121 HOH HOH C . I 6 HOH 16 122 122 HOH HOH C . I 6 HOH 17 133 133 HOH HOH C . I 6 HOH 18 136 136 HOH HOH C . I 6 HOH 19 140 140 HOH HOH C . I 6 HOH 20 153 153 HOH HOH C . I 6 HOH 21 156 156 HOH HOH C . I 6 HOH 22 159 159 HOH HOH C . J 6 HOH 1 503 1 HOH HOH A . J 6 HOH 2 504 2 HOH HOH A . J 6 HOH 3 505 3 HOH HOH A . J 6 HOH 4 506 4 HOH HOH A . J 6 HOH 5 507 5 HOH HOH A . J 6 HOH 6 508 6 HOH HOH A . J 6 HOH 7 509 8 HOH HOH A . J 6 HOH 8 510 9 HOH HOH A . J 6 HOH 9 511 10 HOH HOH A . J 6 HOH 10 512 11 HOH HOH A . J 6 HOH 11 513 12 HOH HOH A . J 6 HOH 12 514 13 HOH HOH A . J 6 HOH 13 515 14 HOH HOH A . J 6 HOH 14 516 15 HOH HOH A . J 6 HOH 15 517 16 HOH HOH A . J 6 HOH 16 518 17 HOH HOH A . J 6 HOH 17 519 18 HOH HOH A . J 6 HOH 18 520 19 HOH HOH A . J 6 HOH 19 521 20 HOH HOH A . J 6 HOH 20 522 21 HOH HOH A . J 6 HOH 21 523 22 HOH HOH A . J 6 HOH 22 524 23 HOH HOH A . J 6 HOH 23 525 24 HOH HOH A . J 6 HOH 24 526 25 HOH HOH A . J 6 HOH 25 527 26 HOH HOH A . J 6 HOH 26 528 29 HOH HOH A . J 6 HOH 27 529 30 HOH HOH A . J 6 HOH 28 530 31 HOH HOH A . J 6 HOH 29 531 33 HOH HOH A . J 6 HOH 30 532 34 HOH HOH A . J 6 HOH 31 533 35 HOH HOH A . J 6 HOH 32 534 37 HOH HOH A . J 6 HOH 33 535 39 HOH HOH A . J 6 HOH 34 536 40 HOH HOH A . J 6 HOH 35 537 41 HOH HOH A . J 6 HOH 36 538 42 HOH HOH A . J 6 HOH 37 539 43 HOH HOH A . J 6 HOH 38 540 47 HOH HOH A . J 6 HOH 39 541 50 HOH HOH A . J 6 HOH 40 542 51 HOH HOH A . J 6 HOH 41 543 52 HOH HOH A . J 6 HOH 42 544 53 HOH HOH A . J 6 HOH 43 545 54 HOH HOH A . J 6 HOH 44 546 55 HOH HOH A . J 6 HOH 45 547 56 HOH HOH A . J 6 HOH 46 548 57 HOH HOH A . J 6 HOH 47 549 59 HOH HOH A . J 6 HOH 48 550 61 HOH HOH A . J 6 HOH 49 551 62 HOH HOH A . J 6 HOH 50 552 63 HOH HOH A . J 6 HOH 51 553 64 HOH HOH A . J 6 HOH 52 554 65 HOH HOH A . J 6 HOH 53 555 66 HOH HOH A . J 6 HOH 54 556 68 HOH HOH A . J 6 HOH 55 557 69 HOH HOH A . J 6 HOH 56 558 70 HOH HOH A . J 6 HOH 57 559 71 HOH HOH A . J 6 HOH 58 560 73 HOH HOH A . J 6 HOH 59 561 75 HOH HOH A . J 6 HOH 60 562 76 HOH HOH A . J 6 HOH 61 563 77 HOH HOH A . J 6 HOH 62 564 78 HOH HOH A . J 6 HOH 63 565 79 HOH HOH A . J 6 HOH 64 566 80 HOH HOH A . J 6 HOH 65 567 81 HOH HOH A . J 6 HOH 66 568 82 HOH HOH A . J 6 HOH 67 569 83 HOH HOH A . J 6 HOH 68 570 84 HOH HOH A . J 6 HOH 69 571 85 HOH HOH A . J 6 HOH 70 572 86 HOH HOH A . J 6 HOH 71 573 87 HOH HOH A . J 6 HOH 72 574 90 HOH HOH A . J 6 HOH 73 575 92 HOH HOH A . J 6 HOH 74 576 93 HOH HOH A . J 6 HOH 75 577 94 HOH HOH A . J 6 HOH 76 578 95 HOH HOH A . J 6 HOH 77 579 96 HOH HOH A . J 6 HOH 78 580 97 HOH HOH A . J 6 HOH 79 581 98 HOH HOH A . J 6 HOH 80 582 99 HOH HOH A . J 6 HOH 81 583 100 HOH HOH A . J 6 HOH 82 584 101 HOH HOH A . J 6 HOH 83 585 102 HOH HOH A . J 6 HOH 84 586 103 HOH HOH A . J 6 HOH 85 587 104 HOH HOH A . J 6 HOH 86 588 105 HOH HOH A . J 6 HOH 87 589 106 HOH HOH A . J 6 HOH 88 590 108 HOH HOH A . J 6 HOH 89 591 109 HOH HOH A . J 6 HOH 90 592 110 HOH HOH A . J 6 HOH 91 593 111 HOH HOH A . J 6 HOH 92 594 112 HOH HOH A . J 6 HOH 93 595 113 HOH HOH A . J 6 HOH 94 596 115 HOH HOH A . J 6 HOH 95 597 117 HOH HOH A . J 6 HOH 96 598 118 HOH HOH A . J 6 HOH 97 599 119 HOH HOH A . J 6 HOH 98 600 120 HOH HOH A . J 6 HOH 99 601 123 HOH HOH A . J 6 HOH 100 602 124 HOH HOH A . J 6 HOH 101 603 125 HOH HOH A . J 6 HOH 102 604 126 HOH HOH A . J 6 HOH 103 605 127 HOH HOH A . J 6 HOH 104 606 128 HOH HOH A . J 6 HOH 105 607 130 HOH HOH A . J 6 HOH 106 608 131 HOH HOH A . J 6 HOH 107 609 132 HOH HOH A . J 6 HOH 108 610 134 HOH HOH A . J 6 HOH 109 611 135 HOH HOH A . J 6 HOH 110 612 137 HOH HOH A . J 6 HOH 111 613 138 HOH HOH A . J 6 HOH 112 614 139 HOH HOH A . J 6 HOH 113 615 141 HOH HOH A . J 6 HOH 114 616 142 HOH HOH A . J 6 HOH 115 617 143 HOH HOH A . J 6 HOH 116 618 144 HOH HOH A . J 6 HOH 117 619 145 HOH HOH A . J 6 HOH 118 620 146 HOH HOH A . J 6 HOH 119 621 147 HOH HOH A . J 6 HOH 120 622 148 HOH HOH A . J 6 HOH 121 623 149 HOH HOH A . J 6 HOH 122 624 150 HOH HOH A . J 6 HOH 123 625 151 HOH HOH A . J 6 HOH 124 626 152 HOH HOH A . J 6 HOH 125 627 154 HOH HOH A . J 6 HOH 126 628 155 HOH HOH A . J 6 HOH 127 629 157 HOH HOH A . J 6 HOH 128 630 158 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? A A 6 ? B A 6 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 141.5 ? 2 "O3'" ? A A 6 ? B A 6 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 115.5 ? 3 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 95.2 ? 4 "O3'" ? A A 6 ? B A 6 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 99.1 ? 5 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 102.8 ? 6 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 91.4 ? 7 "O3'" ? A A 6 ? B A 6 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 77.5 ? 8 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 69.6 ? 9 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 164.5 ? 10 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 94.9 ? 11 "O3'" ? A A 6 ? B A 6 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 537 ? 1_555 78.4 ? 12 OD1 ? C ASP 17 ? A ASP 71 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 537 ? 1_555 77.6 ? 13 OE2 ? C GLU 55 ? A GLU 109 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 537 ? 1_555 92.6 ? 14 OD1 ? C ASP 78 ? A ASP 132 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 537 ? 1_555 175.9 ? 15 O ? J HOH . ? A HOH 506 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 537 ? 1_555 81.5 ? 16 O ? H HOH . ? B HOH 7 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OD2 ? C ASP 138 ? A ASP 192 ? 1_555 163.2 ? 17 O ? H HOH . ? B HOH 7 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 503 ? 1_555 107.0 ? 18 OD2 ? C ASP 138 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 503 ? 1_555 89.7 ? 19 O ? H HOH . ? B HOH 7 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 105.0 ? 20 OD2 ? C ASP 138 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 73.2 ? 21 O ? J HOH . ? A HOH 503 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 92.9 ? 22 O ? H HOH . ? B HOH 7 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 78.1 ? 23 OD2 ? C ASP 138 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 102.5 ? 24 O ? J HOH . ? A HOH 503 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 90.4 ? 25 O ? J HOH . ? A HOH 505 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 506 ? 1_555 174.5 ? 26 O ? H HOH . ? B HOH 7 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 507 ? 1_555 77.5 ? 27 OD2 ? C ASP 138 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 507 ? 1_555 85.8 ? 28 O ? J HOH . ? A HOH 503 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 507 ? 1_555 171.9 ? 29 O ? J HOH . ? A HOH 505 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 507 ? 1_555 79.4 ? 30 O ? J HOH . ? A HOH 506 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? J HOH . ? A HOH 507 ? 1_555 97.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-04-25 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 33 4 'Structure model' '_struct_ref_seq_dif.details' 34 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 CNS phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 U _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 U _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.521 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.086 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 61 ? CG ? C GLU 7 CG 2 1 Y 1 A GLU 61 ? CD ? C GLU 7 CD 3 1 Y 1 A GLU 61 ? OE1 ? C GLU 7 OE1 4 1 Y 1 A GLU 61 ? OE2 ? C GLU 7 OE2 5 1 Y 0 A LYS 146 ? CD ? C LYS 92 CD 6 1 Y 0 A LYS 146 ? CE ? C LYS 92 CE 7 1 Y 0 A LYS 146 ? NZ ? C LYS 92 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 55 ? C GLY 1 2 1 Y 1 A SER 56 ? C SER 2 3 1 Y 1 A HIS 57 ? C HIS 3 4 1 Y 1 A MET 58 ? C MET 4 5 1 Y 1 A ALA 59 ? C ALA 5 6 1 Y 1 A LYS 60 ? C LYS 6 7 1 Y 1 A GLY 194 ? C GLY 140 8 1 Y 1 A ARG 195 ? C ARG 141 9 1 Y 1 A LYS 196 ? C LYS 142 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 DA OP3 O N N 146 DA P P N N 147 DA OP1 O N N 148 DA OP2 O N N 149 DA "O5'" O N N 150 DA "C5'" C N N 151 DA "C4'" C N R 152 DA "O4'" O N N 153 DA "C3'" C N S 154 DA "O3'" O N N 155 DA "C2'" C N N 156 DA "C1'" C N R 157 DA N9 N Y N 158 DA C8 C Y N 159 DA N7 N Y N 160 DA C5 C Y N 161 DA C6 C Y N 162 DA N6 N N N 163 DA N1 N Y N 164 DA C2 C Y N 165 DA N3 N Y N 166 DA C4 C Y N 167 DA HOP3 H N N 168 DA HOP2 H N N 169 DA "H5'" H N N 170 DA "H5''" H N N 171 DA "H4'" H N N 172 DA "H3'" H N N 173 DA "HO3'" H N N 174 DA "H2'" H N N 175 DA "H2''" H N N 176 DA "H1'" H N N 177 DA H8 H N N 178 DA H61 H N N 179 DA H62 H N N 180 DA H2 H N N 181 DC OP3 O N N 182 DC P P N N 183 DC OP1 O N N 184 DC OP2 O N N 185 DC "O5'" O N N 186 DC "C5'" C N N 187 DC "C4'" C N R 188 DC "O4'" O N N 189 DC "C3'" C N S 190 DC "O3'" O N N 191 DC "C2'" C N N 192 DC "C1'" C N R 193 DC N1 N N N 194 DC C2 C N N 195 DC O2 O N N 196 DC N3 N N N 197 DC C4 C N N 198 DC N4 N N N 199 DC C5 C N N 200 DC C6 C N N 201 DC HOP3 H N N 202 DC HOP2 H N N 203 DC "H5'" H N N 204 DC "H5''" H N N 205 DC "H4'" H N N 206 DC "H3'" H N N 207 DC "HO3'" H N N 208 DC "H2'" H N N 209 DC "H2''" H N N 210 DC "H1'" H N N 211 DC H41 H N N 212 DC H42 H N N 213 DC H5 H N N 214 DC H6 H N N 215 DG OP3 O N N 216 DG P P N N 217 DG OP1 O N N 218 DG OP2 O N N 219 DG "O5'" O N N 220 DG "C5'" C N N 221 DG "C4'" C N R 222 DG "O4'" O N N 223 DG "C3'" C N S 224 DG "O3'" O N N 225 DG "C2'" C N N 226 DG "C1'" C N R 227 DG N9 N Y N 228 DG C8 C Y N 229 DG N7 N Y N 230 DG C5 C Y N 231 DG C6 C N N 232 DG O6 O N N 233 DG N1 N N N 234 DG C2 C N N 235 DG N2 N N N 236 DG N3 N N N 237 DG C4 C Y N 238 DG HOP3 H N N 239 DG HOP2 H N N 240 DG "H5'" H N N 241 DG "H5''" H N N 242 DG "H4'" H N N 243 DG "H3'" H N N 244 DG "HO3'" H N N 245 DG "H2'" H N N 246 DG "H2''" H N N 247 DG "H1'" H N N 248 DG H8 H N N 249 DG H1 H N N 250 DG H21 H N N 251 DG H22 H N N 252 DT OP3 O N N 253 DT P P N N 254 DT OP1 O N N 255 DT OP2 O N N 256 DT "O5'" O N N 257 DT "C5'" C N N 258 DT "C4'" C N R 259 DT "O4'" O N N 260 DT "C3'" C N S 261 DT "O3'" O N N 262 DT "C2'" C N N 263 DT "C1'" C N R 264 DT N1 N N N 265 DT C2 C N N 266 DT O2 O N N 267 DT N3 N N N 268 DT C4 C N N 269 DT O4 O N N 270 DT C5 C N N 271 DT C7 C N N 272 DT C6 C N N 273 DT HOP3 H N N 274 DT HOP2 H N N 275 DT "H5'" H N N 276 DT "H5''" H N N 277 DT "H4'" H N N 278 DT "H3'" H N N 279 DT "HO3'" H N N 280 DT "H2'" H N N 281 DT "H2''" H N N 282 DT "H1'" H N N 283 DT H3 H N N 284 DT H71 H N N 285 DT H72 H N N 286 DT H73 H N N 287 DT H6 H N N 288 EOH C1 C N N 289 EOH C2 C N N 290 EOH O O N N 291 EOH H11 H N N 292 EOH H12 H N N 293 EOH H21 H N N 294 EOH H22 H N N 295 EOH H23 H N N 296 EOH HO H N N 297 G OP3 O N N 298 G P P N N 299 G OP1 O N N 300 G OP2 O N N 301 G "O5'" O N N 302 G "C5'" C N N 303 G "C4'" C N R 304 G "O4'" O N N 305 G "C3'" C N S 306 G "O3'" O N N 307 G "C2'" C N R 308 G "O2'" O N N 309 G "C1'" C N R 310 G N9 N Y N 311 G C8 C Y N 312 G N7 N Y N 313 G C5 C Y N 314 G C6 C N N 315 G O6 O N N 316 G N1 N N N 317 G C2 C N N 318 G N2 N N N 319 G N3 N N N 320 G C4 C Y N 321 G HOP3 H N N 322 G HOP2 H N N 323 G "H5'" H N N 324 G "H5''" H N N 325 G "H4'" H N N 326 G "H3'" H N N 327 G "HO3'" H N N 328 G "H2'" H N N 329 G "HO2'" H N N 330 G "H1'" H N N 331 G H8 H N N 332 G H1 H N N 333 G H21 H N N 334 G H22 H N N 335 GLN N N N N 336 GLN CA C N S 337 GLN C C N N 338 GLN O O N N 339 GLN CB C N N 340 GLN CG C N N 341 GLN CD C N N 342 GLN OE1 O N N 343 GLN NE2 N N N 344 GLN OXT O N N 345 GLN H H N N 346 GLN H2 H N N 347 GLN HA H N N 348 GLN HB2 H N N 349 GLN HB3 H N N 350 GLN HG2 H N N 351 GLN HG3 H N N 352 GLN HE21 H N N 353 GLN HE22 H N N 354 GLN HXT H N N 355 GLU N N N N 356 GLU CA C N S 357 GLU C C N N 358 GLU O O N N 359 GLU CB C N N 360 GLU CG C N N 361 GLU CD C N N 362 GLU OE1 O N N 363 GLU OE2 O N N 364 GLU OXT O N N 365 GLU H H N N 366 GLU H2 H N N 367 GLU HA H N N 368 GLU HB2 H N N 369 GLU HB3 H N N 370 GLU HG2 H N N 371 GLU HG3 H N N 372 GLU HE2 H N N 373 GLU HXT H N N 374 GLY N N N N 375 GLY CA C N N 376 GLY C C N N 377 GLY O O N N 378 GLY OXT O N N 379 GLY H H N N 380 GLY H2 H N N 381 GLY HA2 H N N 382 GLY HA3 H N N 383 GLY HXT H N N 384 HIS N N N N 385 HIS CA C N S 386 HIS C C N N 387 HIS O O N N 388 HIS CB C N N 389 HIS CG C Y N 390 HIS ND1 N Y N 391 HIS CD2 C Y N 392 HIS CE1 C Y N 393 HIS NE2 N Y N 394 HIS OXT O N N 395 HIS H H N N 396 HIS H2 H N N 397 HIS HA H N N 398 HIS HB2 H N N 399 HIS HB3 H N N 400 HIS HD1 H N N 401 HIS HD2 H N N 402 HIS HE1 H N N 403 HIS HE2 H N N 404 HIS HXT H N N 405 HOH O O N N 406 HOH H1 H N N 407 HOH H2 H N N 408 ILE N N N N 409 ILE CA C N S 410 ILE C C N N 411 ILE O O N N 412 ILE CB C N S 413 ILE CG1 C N N 414 ILE CG2 C N N 415 ILE CD1 C N N 416 ILE OXT O N N 417 ILE H H N N 418 ILE H2 H N N 419 ILE HA H N N 420 ILE HB H N N 421 ILE HG12 H N N 422 ILE HG13 H N N 423 ILE HG21 H N N 424 ILE HG22 H N N 425 ILE HG23 H N N 426 ILE HD11 H N N 427 ILE HD12 H N N 428 ILE HD13 H N N 429 ILE HXT H N N 430 LEU N N N N 431 LEU CA C N S 432 LEU C C N N 433 LEU O O N N 434 LEU CB C N N 435 LEU CG C N N 436 LEU CD1 C N N 437 LEU CD2 C N N 438 LEU OXT O N N 439 LEU H H N N 440 LEU H2 H N N 441 LEU HA H N N 442 LEU HB2 H N N 443 LEU HB3 H N N 444 LEU HG H N N 445 LEU HD11 H N N 446 LEU HD12 H N N 447 LEU HD13 H N N 448 LEU HD21 H N N 449 LEU HD22 H N N 450 LEU HD23 H N N 451 LEU HXT H N N 452 LYS N N N N 453 LYS CA C N S 454 LYS C C N N 455 LYS O O N N 456 LYS CB C N N 457 LYS CG C N N 458 LYS CD C N N 459 LYS CE C N N 460 LYS NZ N N N 461 LYS OXT O N N 462 LYS H H N N 463 LYS H2 H N N 464 LYS HA H N N 465 LYS HB2 H N N 466 LYS HB3 H N N 467 LYS HG2 H N N 468 LYS HG3 H N N 469 LYS HD2 H N N 470 LYS HD3 H N N 471 LYS HE2 H N N 472 LYS HE3 H N N 473 LYS HZ1 H N N 474 LYS HZ2 H N N 475 LYS HZ3 H N N 476 LYS HXT H N N 477 MET N N N N 478 MET CA C N S 479 MET C C N N 480 MET O O N N 481 MET CB C N N 482 MET CG C N N 483 MET SD S N N 484 MET CE C N N 485 MET OXT O N N 486 MET H H N N 487 MET H2 H N N 488 MET HA H N N 489 MET HB2 H N N 490 MET HB3 H N N 491 MET HG2 H N N 492 MET HG3 H N N 493 MET HE1 H N N 494 MET HE2 H N N 495 MET HE3 H N N 496 MET HXT H N N 497 MG MG MG N N 498 PHE N N N N 499 PHE CA C N S 500 PHE C C N N 501 PHE O O N N 502 PHE CB C N N 503 PHE CG C Y N 504 PHE CD1 C Y N 505 PHE CD2 C Y N 506 PHE CE1 C Y N 507 PHE CE2 C Y N 508 PHE CZ C Y N 509 PHE OXT O N N 510 PHE H H N N 511 PHE H2 H N N 512 PHE HA H N N 513 PHE HB2 H N N 514 PHE HB3 H N N 515 PHE HD1 H N N 516 PHE HD2 H N N 517 PHE HE1 H N N 518 PHE HE2 H N N 519 PHE HZ H N N 520 PHE HXT H N N 521 PRO N N N N 522 PRO CA C N S 523 PRO C C N N 524 PRO O O N N 525 PRO CB C N N 526 PRO CG C N N 527 PRO CD C N N 528 PRO OXT O N N 529 PRO H H N N 530 PRO HA H N N 531 PRO HB2 H N N 532 PRO HB3 H N N 533 PRO HG2 H N N 534 PRO HG3 H N N 535 PRO HD2 H N N 536 PRO HD3 H N N 537 PRO HXT H N N 538 SER N N N N 539 SER CA C N S 540 SER C C N N 541 SER O O N N 542 SER CB C N N 543 SER OG O N N 544 SER OXT O N N 545 SER H H N N 546 SER H2 H N N 547 SER HA H N N 548 SER HB2 H N N 549 SER HB3 H N N 550 SER HG H N N 551 SER HXT H N N 552 THR N N N N 553 THR CA C N S 554 THR C C N N 555 THR O O N N 556 THR CB C N R 557 THR OG1 O N N 558 THR CG2 C N N 559 THR OXT O N N 560 THR H H N N 561 THR H2 H N N 562 THR HA H N N 563 THR HB H N N 564 THR HG1 H N N 565 THR HG21 H N N 566 THR HG22 H N N 567 THR HG23 H N N 568 THR HXT H N N 569 TRP N N N N 570 TRP CA C N S 571 TRP C C N N 572 TRP O O N N 573 TRP CB C N N 574 TRP CG C Y N 575 TRP CD1 C Y N 576 TRP CD2 C Y N 577 TRP NE1 N Y N 578 TRP CE2 C Y N 579 TRP CE3 C Y N 580 TRP CZ2 C Y N 581 TRP CZ3 C Y N 582 TRP CH2 C Y N 583 TRP OXT O N N 584 TRP H H N N 585 TRP H2 H N N 586 TRP HA H N N 587 TRP HB2 H N N 588 TRP HB3 H N N 589 TRP HD1 H N N 590 TRP HE1 H N N 591 TRP HE3 H N N 592 TRP HZ2 H N N 593 TRP HZ3 H N N 594 TRP HH2 H N N 595 TRP HXT H N N 596 TYR N N N N 597 TYR CA C N S 598 TYR C C N N 599 TYR O O N N 600 TYR CB C N N 601 TYR CG C Y N 602 TYR CD1 C Y N 603 TYR CD2 C Y N 604 TYR CE1 C Y N 605 TYR CE2 C Y N 606 TYR CZ C Y N 607 TYR OH O N N 608 TYR OXT O N N 609 TYR H H N N 610 TYR H2 H N N 611 TYR HA H N N 612 TYR HB2 H N N 613 TYR HB3 H N N 614 TYR HD1 H N N 615 TYR HD2 H N N 616 TYR HE1 H N N 617 TYR HE2 H N N 618 TYR HH H N N 619 TYR HXT H N N 620 U OP3 O N N 621 U P P N N 622 U OP1 O N N 623 U OP2 O N N 624 U "O5'" O N N 625 U "C5'" C N N 626 U "C4'" C N R 627 U "O4'" O N N 628 U "C3'" C N S 629 U "O3'" O N N 630 U "C2'" C N R 631 U "O2'" O N N 632 U "C1'" C N R 633 U N1 N N N 634 U C2 C N N 635 U O2 O N N 636 U N3 N N N 637 U C4 C N N 638 U O4 O N N 639 U C5 C N N 640 U C6 C N N 641 U HOP3 H N N 642 U HOP2 H N N 643 U "H5'" H N N 644 U "H5''" H N N 645 U "H4'" H N N 646 U "H3'" H N N 647 U "HO3'" H N N 648 U "H2'" H N N 649 U "HO2'" H N N 650 U "H1'" H N N 651 U H3 H N N 652 U H5 H N N 653 U H6 H N N 654 VAL N N N N 655 VAL CA C N S 656 VAL C C N N 657 VAL O O N N 658 VAL CB C N N 659 VAL CG1 C N N 660 VAL CG2 C N N 661 VAL OXT O N N 662 VAL H H N N 663 VAL H2 H N N 664 VAL HA H N N 665 VAL HB H N N 666 VAL HG11 H N N 667 VAL HG12 H N N 668 VAL HG13 H N N 669 VAL HG21 H N N 670 VAL HG22 H N N 671 VAL HG23 H N N 672 VAL HXT H N N 673 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 DA OP3 P sing N N 145 DA OP3 HOP3 sing N N 146 DA P OP1 doub N N 147 DA P OP2 sing N N 148 DA P "O5'" sing N N 149 DA OP2 HOP2 sing N N 150 DA "O5'" "C5'" sing N N 151 DA "C5'" "C4'" sing N N 152 DA "C5'" "H5'" sing N N 153 DA "C5'" "H5''" sing N N 154 DA "C4'" "O4'" sing N N 155 DA "C4'" "C3'" sing N N 156 DA "C4'" "H4'" sing N N 157 DA "O4'" "C1'" sing N N 158 DA "C3'" "O3'" sing N N 159 DA "C3'" "C2'" sing N N 160 DA "C3'" "H3'" sing N N 161 DA "O3'" "HO3'" sing N N 162 DA "C2'" "C1'" sing N N 163 DA "C2'" "H2'" sing N N 164 DA "C2'" "H2''" sing N N 165 DA "C1'" N9 sing N N 166 DA "C1'" "H1'" sing N N 167 DA N9 C8 sing Y N 168 DA N9 C4 sing Y N 169 DA C8 N7 doub Y N 170 DA C8 H8 sing N N 171 DA N7 C5 sing Y N 172 DA C5 C6 sing Y N 173 DA C5 C4 doub Y N 174 DA C6 N6 sing N N 175 DA C6 N1 doub Y N 176 DA N6 H61 sing N N 177 DA N6 H62 sing N N 178 DA N1 C2 sing Y N 179 DA C2 N3 doub Y N 180 DA C2 H2 sing N N 181 DA N3 C4 sing Y N 182 DC OP3 P sing N N 183 DC OP3 HOP3 sing N N 184 DC P OP1 doub N N 185 DC P OP2 sing N N 186 DC P "O5'" sing N N 187 DC OP2 HOP2 sing N N 188 DC "O5'" "C5'" sing N N 189 DC "C5'" "C4'" sing N N 190 DC "C5'" "H5'" sing N N 191 DC "C5'" "H5''" sing N N 192 DC "C4'" "O4'" sing N N 193 DC "C4'" "C3'" sing N N 194 DC "C4'" "H4'" sing N N 195 DC "O4'" "C1'" sing N N 196 DC "C3'" "O3'" sing N N 197 DC "C3'" "C2'" sing N N 198 DC "C3'" "H3'" sing N N 199 DC "O3'" "HO3'" sing N N 200 DC "C2'" "C1'" sing N N 201 DC "C2'" "H2'" sing N N 202 DC "C2'" "H2''" sing N N 203 DC "C1'" N1 sing N N 204 DC "C1'" "H1'" sing N N 205 DC N1 C2 sing N N 206 DC N1 C6 sing N N 207 DC C2 O2 doub N N 208 DC C2 N3 sing N N 209 DC N3 C4 doub N N 210 DC C4 N4 sing N N 211 DC C4 C5 sing N N 212 DC N4 H41 sing N N 213 DC N4 H42 sing N N 214 DC C5 C6 doub N N 215 DC C5 H5 sing N N 216 DC C6 H6 sing N N 217 DG OP3 P sing N N 218 DG OP3 HOP3 sing N N 219 DG P OP1 doub N N 220 DG P OP2 sing N N 221 DG P "O5'" sing N N 222 DG OP2 HOP2 sing N N 223 DG "O5'" "C5'" sing N N 224 DG "C5'" "C4'" sing N N 225 DG "C5'" "H5'" sing N N 226 DG "C5'" "H5''" sing N N 227 DG "C4'" "O4'" sing N N 228 DG "C4'" "C3'" sing N N 229 DG "C4'" "H4'" sing N N 230 DG "O4'" "C1'" sing N N 231 DG "C3'" "O3'" sing N N 232 DG "C3'" "C2'" sing N N 233 DG "C3'" "H3'" sing N N 234 DG "O3'" "HO3'" sing N N 235 DG "C2'" "C1'" sing N N 236 DG "C2'" "H2'" sing N N 237 DG "C2'" "H2''" sing N N 238 DG "C1'" N9 sing N N 239 DG "C1'" "H1'" sing N N 240 DG N9 C8 sing Y N 241 DG N9 C4 sing Y N 242 DG C8 N7 doub Y N 243 DG C8 H8 sing N N 244 DG N7 C5 sing Y N 245 DG C5 C6 sing N N 246 DG C5 C4 doub Y N 247 DG C6 O6 doub N N 248 DG C6 N1 sing N N 249 DG N1 C2 sing N N 250 DG N1 H1 sing N N 251 DG C2 N2 sing N N 252 DG C2 N3 doub N N 253 DG N2 H21 sing N N 254 DG N2 H22 sing N N 255 DG N3 C4 sing N N 256 DT OP3 P sing N N 257 DT OP3 HOP3 sing N N 258 DT P OP1 doub N N 259 DT P OP2 sing N N 260 DT P "O5'" sing N N 261 DT OP2 HOP2 sing N N 262 DT "O5'" "C5'" sing N N 263 DT "C5'" "C4'" sing N N 264 DT "C5'" "H5'" sing N N 265 DT "C5'" "H5''" sing N N 266 DT "C4'" "O4'" sing N N 267 DT "C4'" "C3'" sing N N 268 DT "C4'" "H4'" sing N N 269 DT "O4'" "C1'" sing N N 270 DT "C3'" "O3'" sing N N 271 DT "C3'" "C2'" sing N N 272 DT "C3'" "H3'" sing N N 273 DT "O3'" "HO3'" sing N N 274 DT "C2'" "C1'" sing N N 275 DT "C2'" "H2'" sing N N 276 DT "C2'" "H2''" sing N N 277 DT "C1'" N1 sing N N 278 DT "C1'" "H1'" sing N N 279 DT N1 C2 sing N N 280 DT N1 C6 sing N N 281 DT C2 O2 doub N N 282 DT C2 N3 sing N N 283 DT N3 C4 sing N N 284 DT N3 H3 sing N N 285 DT C4 O4 doub N N 286 DT C4 C5 sing N N 287 DT C5 C7 sing N N 288 DT C5 C6 doub N N 289 DT C7 H71 sing N N 290 DT C7 H72 sing N N 291 DT C7 H73 sing N N 292 DT C6 H6 sing N N 293 EOH C1 C2 sing N N 294 EOH C1 O sing N N 295 EOH C1 H11 sing N N 296 EOH C1 H12 sing N N 297 EOH C2 H21 sing N N 298 EOH C2 H22 sing N N 299 EOH C2 H23 sing N N 300 EOH O HO sing N N 301 G OP3 P sing N N 302 G OP3 HOP3 sing N N 303 G P OP1 doub N N 304 G P OP2 sing N N 305 G P "O5'" sing N N 306 G OP2 HOP2 sing N N 307 G "O5'" "C5'" sing N N 308 G "C5'" "C4'" sing N N 309 G "C5'" "H5'" sing N N 310 G "C5'" "H5''" sing N N 311 G "C4'" "O4'" sing N N 312 G "C4'" "C3'" sing N N 313 G "C4'" "H4'" sing N N 314 G "O4'" "C1'" sing N N 315 G "C3'" "O3'" sing N N 316 G "C3'" "C2'" sing N N 317 G "C3'" "H3'" sing N N 318 G "O3'" "HO3'" sing N N 319 G "C2'" "O2'" sing N N 320 G "C2'" "C1'" sing N N 321 G "C2'" "H2'" sing N N 322 G "O2'" "HO2'" sing N N 323 G "C1'" N9 sing N N 324 G "C1'" "H1'" sing N N 325 G N9 C8 sing Y N 326 G N9 C4 sing Y N 327 G C8 N7 doub Y N 328 G C8 H8 sing N N 329 G N7 C5 sing Y N 330 G C5 C6 sing N N 331 G C5 C4 doub Y N 332 G C6 O6 doub N N 333 G C6 N1 sing N N 334 G N1 C2 sing N N 335 G N1 H1 sing N N 336 G C2 N2 sing N N 337 G C2 N3 doub N N 338 G N2 H21 sing N N 339 G N2 H22 sing N N 340 G N3 C4 sing N N 341 GLN N CA sing N N 342 GLN N H sing N N 343 GLN N H2 sing N N 344 GLN CA C sing N N 345 GLN CA CB sing N N 346 GLN CA HA sing N N 347 GLN C O doub N N 348 GLN C OXT sing N N 349 GLN CB CG sing N N 350 GLN CB HB2 sing N N 351 GLN CB HB3 sing N N 352 GLN CG CD sing N N 353 GLN CG HG2 sing N N 354 GLN CG HG3 sing N N 355 GLN CD OE1 doub N N 356 GLN CD NE2 sing N N 357 GLN NE2 HE21 sing N N 358 GLN NE2 HE22 sing N N 359 GLN OXT HXT sing N N 360 GLU N CA sing N N 361 GLU N H sing N N 362 GLU N H2 sing N N 363 GLU CA C sing N N 364 GLU CA CB sing N N 365 GLU CA HA sing N N 366 GLU C O doub N N 367 GLU C OXT sing N N 368 GLU CB CG sing N N 369 GLU CB HB2 sing N N 370 GLU CB HB3 sing N N 371 GLU CG CD sing N N 372 GLU CG HG2 sing N N 373 GLU CG HG3 sing N N 374 GLU CD OE1 doub N N 375 GLU CD OE2 sing N N 376 GLU OE2 HE2 sing N N 377 GLU OXT HXT sing N N 378 GLY N CA sing N N 379 GLY N H sing N N 380 GLY N H2 sing N N 381 GLY CA C sing N N 382 GLY CA HA2 sing N N 383 GLY CA HA3 sing N N 384 GLY C O doub N N 385 GLY C OXT sing N N 386 GLY OXT HXT sing N N 387 HIS N CA sing N N 388 HIS N H sing N N 389 HIS N H2 sing N N 390 HIS CA C sing N N 391 HIS CA CB sing N N 392 HIS CA HA sing N N 393 HIS C O doub N N 394 HIS C OXT sing N N 395 HIS CB CG sing N N 396 HIS CB HB2 sing N N 397 HIS CB HB3 sing N N 398 HIS CG ND1 sing Y N 399 HIS CG CD2 doub Y N 400 HIS ND1 CE1 doub Y N 401 HIS ND1 HD1 sing N N 402 HIS CD2 NE2 sing Y N 403 HIS CD2 HD2 sing N N 404 HIS CE1 NE2 sing Y N 405 HIS CE1 HE1 sing N N 406 HIS NE2 HE2 sing N N 407 HIS OXT HXT sing N N 408 HOH O H1 sing N N 409 HOH O H2 sing N N 410 ILE N CA sing N N 411 ILE N H sing N N 412 ILE N H2 sing N N 413 ILE CA C sing N N 414 ILE CA CB sing N N 415 ILE CA HA sing N N 416 ILE C O doub N N 417 ILE C OXT sing N N 418 ILE CB CG1 sing N N 419 ILE CB CG2 sing N N 420 ILE CB HB sing N N 421 ILE CG1 CD1 sing N N 422 ILE CG1 HG12 sing N N 423 ILE CG1 HG13 sing N N 424 ILE CG2 HG21 sing N N 425 ILE CG2 HG22 sing N N 426 ILE CG2 HG23 sing N N 427 ILE CD1 HD11 sing N N 428 ILE CD1 HD12 sing N N 429 ILE CD1 HD13 sing N N 430 ILE OXT HXT sing N N 431 LEU N CA sing N N 432 LEU N H sing N N 433 LEU N H2 sing N N 434 LEU CA C sing N N 435 LEU CA CB sing N N 436 LEU CA HA sing N N 437 LEU C O doub N N 438 LEU C OXT sing N N 439 LEU CB CG sing N N 440 LEU CB HB2 sing N N 441 LEU CB HB3 sing N N 442 LEU CG CD1 sing N N 443 LEU CG CD2 sing N N 444 LEU CG HG sing N N 445 LEU CD1 HD11 sing N N 446 LEU CD1 HD12 sing N N 447 LEU CD1 HD13 sing N N 448 LEU CD2 HD21 sing N N 449 LEU CD2 HD22 sing N N 450 LEU CD2 HD23 sing N N 451 LEU OXT HXT sing N N 452 LYS N CA sing N N 453 LYS N H sing N N 454 LYS N H2 sing N N 455 LYS CA C sing N N 456 LYS CA CB sing N N 457 LYS CA HA sing N N 458 LYS C O doub N N 459 LYS C OXT sing N N 460 LYS CB CG sing N N 461 LYS CB HB2 sing N N 462 LYS CB HB3 sing N N 463 LYS CG CD sing N N 464 LYS CG HG2 sing N N 465 LYS CG HG3 sing N N 466 LYS CD CE sing N N 467 LYS CD HD2 sing N N 468 LYS CD HD3 sing N N 469 LYS CE NZ sing N N 470 LYS CE HE2 sing N N 471 LYS CE HE3 sing N N 472 LYS NZ HZ1 sing N N 473 LYS NZ HZ2 sing N N 474 LYS NZ HZ3 sing N N 475 LYS OXT HXT sing N N 476 MET N CA sing N N 477 MET N H sing N N 478 MET N H2 sing N N 479 MET CA C sing N N 480 MET CA CB sing N N 481 MET CA HA sing N N 482 MET C O doub N N 483 MET C OXT sing N N 484 MET CB CG sing N N 485 MET CB HB2 sing N N 486 MET CB HB3 sing N N 487 MET CG SD sing N N 488 MET CG HG2 sing N N 489 MET CG HG3 sing N N 490 MET SD CE sing N N 491 MET CE HE1 sing N N 492 MET CE HE2 sing N N 493 MET CE HE3 sing N N 494 MET OXT HXT sing N N 495 PHE N CA sing N N 496 PHE N H sing N N 497 PHE N H2 sing N N 498 PHE CA C sing N N 499 PHE CA CB sing N N 500 PHE CA HA sing N N 501 PHE C O doub N N 502 PHE C OXT sing N N 503 PHE CB CG sing N N 504 PHE CB HB2 sing N N 505 PHE CB HB3 sing N N 506 PHE CG CD1 doub Y N 507 PHE CG CD2 sing Y N 508 PHE CD1 CE1 sing Y N 509 PHE CD1 HD1 sing N N 510 PHE CD2 CE2 doub Y N 511 PHE CD2 HD2 sing N N 512 PHE CE1 CZ doub Y N 513 PHE CE1 HE1 sing N N 514 PHE CE2 CZ sing Y N 515 PHE CE2 HE2 sing N N 516 PHE CZ HZ sing N N 517 PHE OXT HXT sing N N 518 PRO N CA sing N N 519 PRO N CD sing N N 520 PRO N H sing N N 521 PRO CA C sing N N 522 PRO CA CB sing N N 523 PRO CA HA sing N N 524 PRO C O doub N N 525 PRO C OXT sing N N 526 PRO CB CG sing N N 527 PRO CB HB2 sing N N 528 PRO CB HB3 sing N N 529 PRO CG CD sing N N 530 PRO CG HG2 sing N N 531 PRO CG HG3 sing N N 532 PRO CD HD2 sing N N 533 PRO CD HD3 sing N N 534 PRO OXT HXT sing N N 535 SER N CA sing N N 536 SER N H sing N N 537 SER N H2 sing N N 538 SER CA C sing N N 539 SER CA CB sing N N 540 SER CA HA sing N N 541 SER C O doub N N 542 SER C OXT sing N N 543 SER CB OG sing N N 544 SER CB HB2 sing N N 545 SER CB HB3 sing N N 546 SER OG HG sing N N 547 SER OXT HXT sing N N 548 THR N CA sing N N 549 THR N H sing N N 550 THR N H2 sing N N 551 THR CA C sing N N 552 THR CA CB sing N N 553 THR CA HA sing N N 554 THR C O doub N N 555 THR C OXT sing N N 556 THR CB OG1 sing N N 557 THR CB CG2 sing N N 558 THR CB HB sing N N 559 THR OG1 HG1 sing N N 560 THR CG2 HG21 sing N N 561 THR CG2 HG22 sing N N 562 THR CG2 HG23 sing N N 563 THR OXT HXT sing N N 564 TRP N CA sing N N 565 TRP N H sing N N 566 TRP N H2 sing N N 567 TRP CA C sing N N 568 TRP CA CB sing N N 569 TRP CA HA sing N N 570 TRP C O doub N N 571 TRP C OXT sing N N 572 TRP CB CG sing N N 573 TRP CB HB2 sing N N 574 TRP CB HB3 sing N N 575 TRP CG CD1 doub Y N 576 TRP CG CD2 sing Y N 577 TRP CD1 NE1 sing Y N 578 TRP CD1 HD1 sing N N 579 TRP CD2 CE2 doub Y N 580 TRP CD2 CE3 sing Y N 581 TRP NE1 CE2 sing Y N 582 TRP NE1 HE1 sing N N 583 TRP CE2 CZ2 sing Y N 584 TRP CE3 CZ3 doub Y N 585 TRP CE3 HE3 sing N N 586 TRP CZ2 CH2 doub Y N 587 TRP CZ2 HZ2 sing N N 588 TRP CZ3 CH2 sing Y N 589 TRP CZ3 HZ3 sing N N 590 TRP CH2 HH2 sing N N 591 TRP OXT HXT sing N N 592 TYR N CA sing N N 593 TYR N H sing N N 594 TYR N H2 sing N N 595 TYR CA C sing N N 596 TYR CA CB sing N N 597 TYR CA HA sing N N 598 TYR C O doub N N 599 TYR C OXT sing N N 600 TYR CB CG sing N N 601 TYR CB HB2 sing N N 602 TYR CB HB3 sing N N 603 TYR CG CD1 doub Y N 604 TYR CG CD2 sing Y N 605 TYR CD1 CE1 sing Y N 606 TYR CD1 HD1 sing N N 607 TYR CD2 CE2 doub Y N 608 TYR CD2 HD2 sing N N 609 TYR CE1 CZ doub Y N 610 TYR CE1 HE1 sing N N 611 TYR CE2 CZ sing Y N 612 TYR CE2 HE2 sing N N 613 TYR CZ OH sing N N 614 TYR OH HH sing N N 615 TYR OXT HXT sing N N 616 U OP3 P sing N N 617 U OP3 HOP3 sing N N 618 U P OP1 doub N N 619 U P OP2 sing N N 620 U P "O5'" sing N N 621 U OP2 HOP2 sing N N 622 U "O5'" "C5'" sing N N 623 U "C5'" "C4'" sing N N 624 U "C5'" "H5'" sing N N 625 U "C5'" "H5''" sing N N 626 U "C4'" "O4'" sing N N 627 U "C4'" "C3'" sing N N 628 U "C4'" "H4'" sing N N 629 U "O4'" "C1'" sing N N 630 U "C3'" "O3'" sing N N 631 U "C3'" "C2'" sing N N 632 U "C3'" "H3'" sing N N 633 U "O3'" "HO3'" sing N N 634 U "C2'" "O2'" sing N N 635 U "C2'" "C1'" sing N N 636 U "C2'" "H2'" sing N N 637 U "O2'" "HO2'" sing N N 638 U "C1'" N1 sing N N 639 U "C1'" "H1'" sing N N 640 U N1 C2 sing N N 641 U N1 C6 sing N N 642 U C2 O2 doub N N 643 U C2 N3 sing N N 644 U N3 C4 sing N N 645 U N3 H3 sing N N 646 U C4 O4 doub N N 647 U C4 C5 sing N N 648 U C5 C6 doub N N 649 U C5 H5 sing N N 650 U C6 H6 sing N N 651 VAL N CA sing N N 652 VAL N H sing N N 653 VAL N H2 sing N N 654 VAL CA C sing N N 655 VAL CA CB sing N N 656 VAL CA HA sing N N 657 VAL C O doub N N 658 VAL C OXT sing N N 659 VAL CB CG1 sing N N 660 VAL CB CG2 sing N N 661 VAL CB HB sing N N 662 VAL CG1 HG11 sing N N 663 VAL CG1 HG12 sing N N 664 VAL CG1 HG13 sing N N 665 VAL CG2 HG21 sing N N 666 VAL CG2 HG22 sing N N 667 VAL CG2 HG23 sing N N 668 VAL OXT HXT sing N N 669 # _ndb_struct_conf_na.entry_id 2G8V _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 2 1_555 B DG 6 1_555 0.211 -0.131 0.149 -4.396 -11.743 0.685 1 B_C2:DG6_C B 2 ? C 6 ? 19 1 1 A G 3 1_555 B DC 5 1_555 -0.260 -0.171 -0.533 -21.985 -11.591 1.695 2 B_G3:DC5_C B 3 ? C 5 ? 19 1 1 A A 4 1_555 B DT 4 1_555 0.112 -0.098 -0.455 -16.420 -9.517 3.937 3 B_A4:DT4_C B 4 ? C 4 ? 20 1 1 A C 5 1_555 B DG 3 1_555 0.091 -0.136 0.238 -9.975 -10.438 0.774 4 B_C5:DG3_C B 5 ? C 3 ? 19 1 1 A A 6 1_555 B DT 2 1_555 0.245 -0.020 -0.390 -9.820 -3.375 2.072 5 B_A6:DT2_C B 6 ? C 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 2 1_555 B DG 6 1_555 A G 3 1_555 B DC 5 1_555 0.445 -1.025 3.627 6.037 9.818 34.975 -3.072 0.184 3.261 15.813 -9.723 36.768 1 BB_C2G3:DC5DG6_CC B 2 ? C 6 ? B 3 ? C 5 ? 1 A G 3 1_555 B DC 5 1_555 A A 4 1_555 B DT 4 1_555 0.675 -1.219 3.303 3.358 4.199 33.769 -2.735 -0.618 3.183 7.172 -5.736 34.182 2 BB_G3A4:DT4DC5_CC B 3 ? C 5 ? B 4 ? C 4 ? 1 A A 4 1_555 B DT 4 1_555 A C 5 1_555 B DG 3 1_555 -0.623 -1.236 3.142 -3.910 10.733 27.514 -4.445 0.472 2.553 21.434 7.808 29.748 3 BB_A4C5:DG3DT4_CC B 4 ? C 4 ? B 5 ? C 3 ? 1 A C 5 1_555 B DG 3 1_555 A A 6 1_555 B DT 2 1_555 0.879 -1.657 3.421 7.196 4.451 26.827 -4.500 -0.050 3.231 9.304 -15.042 28.107 4 BB_C5A6:DT2DG3_CC B 5 ? C 3 ? B 6 ? C 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 ETHANOL EOH 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZBI _pdbx_initial_refinement_model.details 'PDB ENTRY 1ZBI' #