data_2G91 # _entry.id 2G91 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2G91 pdb_00002g91 10.2210/pdb2g91/pdb NDB AR0069 ? ? RCSB RCSB036840 ? ? WWPDB D_1000036840 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-03 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.value' 10 4 'Structure model' '_struct_conn.conn_type_id' 11 4 'Structure model' '_struct_conn.id' 12 4 'Structure model' '_struct_conn.pdbx_dist_value' 13 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 22 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2G91 _pdbx_database_status.recvd_initial_deposition_date 2006-03-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shi, K.' 1 'Pan, B.' 2 'Sundaralingam, M.' 3 # _citation.id primary _citation.title 'Crystal Structure of an RNA nonamer r(GGUGCGC)d(BrC)r(C) at 1.5 A resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, K.' 1 ? primary 'Pan, B.' 2 ? primary 'Sundaralingam, M.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*GP*GP*UP*GP*CP*GP*CP*(CBR)P*C-3'" 2925.655 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 water nat water 18.015 88 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GGUGCGC(CBR)C' _entity_poly.pdbx_seq_one_letter_code_can GGUGCGCCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 G n 1 5 C n 1 6 G n 1 7 C n 1 8 CBR n 1 9 C n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CBR 'DNA linking' n "5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 Br N3 O7 P' 386.093 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GUA A . n A 1 2 G 2 2 2 G GUA A . n A 1 3 U 3 3 3 U URI A . n A 1 4 G 4 4 4 G GUA A . n A 1 5 C 5 5 5 C CYT A . n A 1 6 G 6 6 6 G GUA A . n A 1 7 C 7 7 7 C CYT A . n A 1 8 CBR 8 8 8 CBR CYT A . n A 1 9 C 9 9 9 C CYT A . n B 1 1 G 1 10 10 G GUA B . n B 1 2 G 2 11 11 G GUA B . n B 1 3 U 3 12 12 U URI B . n B 1 4 G 4 13 13 G GUA B . n B 1 5 C 5 14 14 C CYT B . n B 1 6 G 6 15 15 G GUA B . n B 1 7 C 7 16 16 C CYT B . n B 1 8 CBR 8 17 17 CBR CYT B . n B 1 9 C 9 18 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 191 191 MG MG2 A . D 2 MG 1 192 192 MG MG2 B . E 3 HOH 1 107 107 HOH WAT A . E 3 HOH 2 108 108 HOH WAT A . E 3 HOH 3 109 109 HOH WAT A . E 3 HOH 4 110 110 HOH WAT A . E 3 HOH 5 111 111 HOH WAT A . E 3 HOH 6 112 112 HOH WAT A . E 3 HOH 7 113 113 HOH WAT A . E 3 HOH 8 114 114 HOH WAT A . E 3 HOH 9 115 115 HOH WAT A . E 3 HOH 10 116 116 HOH WAT A . E 3 HOH 11 117 117 HOH WAT A . E 3 HOH 12 118 118 HOH WAT A . E 3 HOH 13 119 119 HOH WAT A . E 3 HOH 14 120 120 HOH WAT A . E 3 HOH 15 121 121 HOH WAT A . E 3 HOH 16 127 127 HOH WAT A . E 3 HOH 17 131 131 HOH WAT A . E 3 HOH 18 132 132 HOH WAT A . E 3 HOH 19 133 133 HOH WAT A . E 3 HOH 20 135 135 HOH WAT A . E 3 HOH 21 137 137 HOH WAT A . E 3 HOH 22 139 139 HOH WAT A . E 3 HOH 23 140 140 HOH WAT A . E 3 HOH 24 144 144 HOH WAT A . E 3 HOH 25 145 145 HOH WAT A . E 3 HOH 26 148 148 HOH WAT A . E 3 HOH 27 149 149 HOH WAT A . E 3 HOH 28 150 150 HOH WAT A . E 3 HOH 29 151 151 HOH WAT A . E 3 HOH 30 152 152 HOH WAT A . E 3 HOH 31 153 153 HOH WAT A . E 3 HOH 32 154 154 HOH WAT A . E 3 HOH 33 155 155 HOH WAT A . E 3 HOH 34 156 156 HOH WAT A . E 3 HOH 35 162 162 HOH WAT A . E 3 HOH 36 165 165 HOH WAT A . E 3 HOH 37 168 168 HOH WAT A . E 3 HOH 38 170 170 HOH WAT A . E 3 HOH 39 171 171 HOH WAT A . E 3 HOH 40 172 172 HOH WAT A . E 3 HOH 41 175 175 HOH WAT A . E 3 HOH 42 176 176 HOH WAT A . E 3 HOH 43 177 177 HOH WAT A . E 3 HOH 44 179 179 HOH WAT A . E 3 HOH 45 180 180 HOH WAT A . E 3 HOH 46 183 183 HOH WAT A . E 3 HOH 47 184 184 HOH WAT A . E 3 HOH 48 186 186 HOH WAT A . F 3 HOH 1 101 101 HOH WAT B . F 3 HOH 2 102 102 HOH WAT B . F 3 HOH 3 103 103 HOH WAT B . F 3 HOH 4 104 104 HOH WAT B . F 3 HOH 5 105 105 HOH WAT B . F 3 HOH 6 106 106 HOH WAT B . F 3 HOH 7 122 122 HOH WAT B . F 3 HOH 8 123 123 HOH WAT B . F 3 HOH 9 124 124 HOH WAT B . F 3 HOH 10 125 125 HOH WAT B . F 3 HOH 11 126 126 HOH WAT B . F 3 HOH 12 128 128 HOH WAT B . F 3 HOH 13 129 129 HOH WAT B . F 3 HOH 14 130 130 HOH WAT B . F 3 HOH 15 134 134 HOH WAT B . F 3 HOH 16 136 136 HOH WAT B . F 3 HOH 17 138 138 HOH WAT B . F 3 HOH 18 141 141 HOH WAT B . F 3 HOH 19 142 142 HOH WAT B . F 3 HOH 20 143 143 HOH WAT B . F 3 HOH 21 157 157 HOH WAT B . F 3 HOH 22 158 158 HOH WAT B . F 3 HOH 23 159 159 HOH WAT B . F 3 HOH 24 160 160 HOH WAT B . F 3 HOH 25 161 161 HOH WAT B . F 3 HOH 26 163 163 HOH WAT B . F 3 HOH 27 164 164 HOH WAT B . F 3 HOH 28 166 166 HOH WAT B . F 3 HOH 29 167 167 HOH WAT B . F 3 HOH 30 169 169 HOH WAT B . F 3 HOH 31 173 173 HOH WAT B . F 3 HOH 32 174 174 HOH WAT B . F 3 HOH 33 178 178 HOH WAT B . F 3 HOH 34 181 181 HOH WAT B . F 3 HOH 35 182 182 HOH WAT B . F 3 HOH 36 185 185 HOH WAT B . F 3 HOH 37 187 187 HOH WAT B . F 3 HOH 38 188 188 HOH WAT B . F 3 HOH 39 189 189 HOH WAT B . F 3 HOH 40 190 190 HOH WAT B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' . ? 3 CNS refinement 1.0 ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 2G91 _cell.length_a 44.830 _cell.length_b 44.830 _cell.length_c 125.910 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2G91 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2G91 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 298.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 2000-12-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2G91 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 10 _reflns.d_resolution_high 1.5 _reflns.number_obs 7557 _reflns.number_all 8097 _reflns.percent_possible_obs 91.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.56 _reflns_shell.percent_possible_all 73.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2G91 _refine.ls_number_reflns_obs 6599 _refine.ls_number_reflns_all 7382 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10 _refine.ls_d_res_high 1.5 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1902 _refine.ls_R_factor_all 0.1945 _refine.ls_R_factor_R_work 0.1868 _refine.ls_R_factor_R_free 0.2289 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 783 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 358 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 448 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low 10 # _database_PDB_matrix.entry_id 2G91 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2G91 _struct.title 'Crystal Structure Analysis of the an RNA nonamer r(GGUGCGC)d(BrC)r(C)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2G91 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA DOUBLE HELIX, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2G91 _struct_ref.pdbx_db_accession 2G91 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2G91 A 1 ? 9 ? 2G91 1 ? 9 ? 1 9 2 1 2G91 B 1 ? 9 ? 2G91 10 ? 18 ? 10 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C 7 "O3'" ? ? ? 1_555 A CBR 8 P ? ? A C 7 A CBR 8 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale2 covale both ? A CBR 8 "O3'" ? ? ? 1_555 A C 9 P ? ? A CBR 8 A C 9 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale3 covale both ? B C 7 "O3'" ? ? ? 1_555 B CBR 8 P ? ? B C 16 B CBR 17 1_555 ? ? ? ? ? ? ? 1.609 ? ? metalc1 metalc ? ? E HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 116 A MG 191 1_555 ? ? ? ? ? ? ? 1.963 ? ? metalc2 metalc ? ? E HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 120 A MG 191 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc3 metalc ? ? E HOH . O ? ? ? 1_555 D MG . MG ? ? A HOH 139 B MG 192 1_555 ? ? ? ? ? ? ? 2.038 ? ? metalc4 metalc ? ? E HOH . O ? ? ? 1_555 D MG . MG ? ? A HOH 140 B MG 192 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc5 metalc ? ? E HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 162 A MG 191 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc6 metalc ? ? E HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 180 A MG 191 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc7 metalc ? ? E HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 184 A MG 191 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 191 B HOH 122 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc9 metalc ? ? F HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 138 B MG 192 1_555 ? ? ? ? ? ? ? 2.052 ? ? metalc10 metalc ? ? F HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 141 B MG 192 1_555 ? ? ? ? ? ? ? 2.096 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B CBR 8 N3 ? ? A G 1 B CBR 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B CBR 8 O2 ? ? A G 1 B CBR 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B CBR 8 N4 ? ? A G 1 B CBR 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 7 N3 ? ? A G 2 B C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 7 O2 ? ? A G 2 B C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 7 N4 ? ? A G 2 B C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 B G 6 O6 ? ? A U 3 B G 15 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A U 3 O2 ? ? ? 1_555 B G 6 N1 ? ? A U 3 B G 15 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 4 B C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 4 B C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 4 B C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 5 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 5 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 5 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N1 ? ? ? 1_555 B U 3 O2 ? ? A G 6 B U 12 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 B U 3 N3 ? ? A G 6 B U 12 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 7 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 7 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 7 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A CBR 8 N3 ? ? ? 1_555 B G 1 N1 ? ? A CBR 8 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A CBR 8 N4 ? ? ? 1_555 B G 1 O6 ? ? A CBR 8 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A CBR 8 O2 ? ? ? 1_555 B G 1 N2 ? ? A CBR 8 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 116 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 120 ? 1_555 87.6 ? 2 O ? E HOH . ? A HOH 116 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 162 ? 1_555 89.6 ? 3 O ? E HOH . ? A HOH 120 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 162 ? 1_555 102.4 ? 4 O ? E HOH . ? A HOH 116 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 180 ? 1_555 91.7 ? 5 O ? E HOH . ? A HOH 120 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 180 ? 1_555 97.2 ? 6 O ? E HOH . ? A HOH 162 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 180 ? 1_555 160.3 ? 7 O ? E HOH . ? A HOH 116 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 184 ? 1_555 110.2 ? 8 O ? E HOH . ? A HOH 120 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 184 ? 1_555 161.2 ? 9 O ? E HOH . ? A HOH 162 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 184 ? 1_555 84.3 ? 10 O ? E HOH . ? A HOH 180 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? E HOH . ? A HOH 184 ? 1_555 76.8 ? 11 O ? E HOH . ? A HOH 116 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? F HOH . ? B HOH 122 ? 1_555 173.0 ? 12 O ? E HOH . ? A HOH 120 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? F HOH . ? B HOH 122 ? 1_555 89.3 ? 13 O ? E HOH . ? A HOH 162 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? F HOH . ? B HOH 122 ? 1_555 85.0 ? 14 O ? E HOH . ? A HOH 180 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? F HOH . ? B HOH 122 ? 1_555 94.9 ? 15 O ? E HOH . ? A HOH 184 ? 1_555 MG ? C MG . ? A MG 191 ? 1_555 O ? F HOH . ? B HOH 122 ? 1_555 73.7 ? 16 O ? E HOH . ? A HOH 139 ? 1_555 MG ? D MG . ? B MG 192 ? 1_555 O ? E HOH . ? A HOH 140 ? 1_555 85.1 ? 17 O ? E HOH . ? A HOH 139 ? 1_555 MG ? D MG . ? B MG 192 ? 1_555 O ? F HOH . ? B HOH 138 ? 1_555 165.8 ? 18 O ? E HOH . ? A HOH 140 ? 1_555 MG ? D MG . ? B MG 192 ? 1_555 O ? F HOH . ? B HOH 138 ? 1_555 90.3 ? 19 O ? E HOH . ? A HOH 139 ? 1_555 MG ? D MG . ? B MG 192 ? 1_555 O ? F HOH . ? B HOH 141 ? 1_555 95.2 ? 20 O ? E HOH . ? A HOH 140 ? 1_555 MG ? D MG . ? B MG 192 ? 1_555 O ? F HOH . ? B HOH 141 ? 1_555 177.0 ? 21 O ? F HOH . ? B HOH 138 ? 1_555 MG ? D MG . ? B MG 192 ? 1_555 O ? F HOH . ? B HOH 141 ? 1_555 88.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 191 ? 6 'BINDING SITE FOR RESIDUE MG A 191' AC2 Software B MG 192 ? 4 'BINDING SITE FOR RESIDUE MG B 192' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH E . ? HOH A 116 . ? 1_555 ? 2 AC1 6 HOH E . ? HOH A 120 . ? 1_555 ? 3 AC1 6 HOH E . ? HOH A 162 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH A 180 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH A 184 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH B 122 . ? 1_555 ? 7 AC2 4 HOH E . ? HOH A 139 . ? 1_555 ? 8 AC2 4 HOH E . ? HOH A 140 . ? 1_555 ? 9 AC2 4 HOH F . ? HOH B 138 . ? 1_555 ? 10 AC2 4 HOH F . ? HOH B 141 . ? 1_555 ? # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CBR 8 A CBR 8 ? DC ? 2 B CBR 8 B CBR 17 ? DC ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id C _pdbx_unobs_or_zero_occ_residues.auth_seq_id 18 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id C _pdbx_unobs_or_zero_occ_residues.label_seq_id 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal C OP3 O N N 1 C P P N N 2 C OP1 O N N 3 C OP2 O N N 4 C "O5'" O N N 5 C "C5'" C N N 6 C "C4'" C N R 7 C "O4'" O N N 8 C "C3'" C N S 9 C "O3'" O N N 10 C "C2'" C N R 11 C "O2'" O N N 12 C "C1'" C N R 13 C N1 N N N 14 C C2 C N N 15 C O2 O N N 16 C N3 N N N 17 C C4 C N N 18 C N4 N N N 19 C C5 C N N 20 C C6 C N N 21 C HOP3 H N N 22 C HOP2 H N N 23 C "H5'" H N N 24 C "H5''" H N N 25 C "H4'" H N N 26 C "H3'" H N N 27 C "HO3'" H N N 28 C "H2'" H N N 29 C "HO2'" H N N 30 C "H1'" H N N 31 C H41 H N N 32 C H42 H N N 33 C H5 H N N 34 C H6 H N N 35 CBR BR BR N N 36 CBR P P N N 37 CBR OP1 O N N 38 CBR OP2 O N N 39 CBR "O5'" O N N 40 CBR N1 N N N 41 CBR C6 C N N 42 CBR C2 C N N 43 CBR O2 O N N 44 CBR N3 N N N 45 CBR C4 C N N 46 CBR N4 N N N 47 CBR C5 C N N 48 CBR "C2'" C N N 49 CBR "C5'" C N N 50 CBR "C4'" C N R 51 CBR "O4'" O N N 52 CBR "C1'" C N R 53 CBR "C3'" C N S 54 CBR "O3'" O N N 55 CBR OP3 O N N 56 CBR HOP2 H N N 57 CBR H6 H N N 58 CBR H41 H N N 59 CBR H42 H N N 60 CBR "H2'" H N N 61 CBR "H2''" H N N 62 CBR "H5'" H N N 63 CBR "H5''" H N N 64 CBR "H4'" H N N 65 CBR "H1'" H N N 66 CBR "H3'" H N N 67 CBR "HO3'" H N N 68 CBR HOP3 H N N 69 G OP3 O N N 70 G P P N N 71 G OP1 O N N 72 G OP2 O N N 73 G "O5'" O N N 74 G "C5'" C N N 75 G "C4'" C N R 76 G "O4'" O N N 77 G "C3'" C N S 78 G "O3'" O N N 79 G "C2'" C N R 80 G "O2'" O N N 81 G "C1'" C N R 82 G N9 N Y N 83 G C8 C Y N 84 G N7 N Y N 85 G C5 C Y N 86 G C6 C N N 87 G O6 O N N 88 G N1 N N N 89 G C2 C N N 90 G N2 N N N 91 G N3 N N N 92 G C4 C Y N 93 G HOP3 H N N 94 G HOP2 H N N 95 G "H5'" H N N 96 G "H5''" H N N 97 G "H4'" H N N 98 G "H3'" H N N 99 G "HO3'" H N N 100 G "H2'" H N N 101 G "HO2'" H N N 102 G "H1'" H N N 103 G H8 H N N 104 G H1 H N N 105 G H21 H N N 106 G H22 H N N 107 HOH O O N N 108 HOH H1 H N N 109 HOH H2 H N N 110 MG MG MG N N 111 U OP3 O N N 112 U P P N N 113 U OP1 O N N 114 U OP2 O N N 115 U "O5'" O N N 116 U "C5'" C N N 117 U "C4'" C N R 118 U "O4'" O N N 119 U "C3'" C N S 120 U "O3'" O N N 121 U "C2'" C N R 122 U "O2'" O N N 123 U "C1'" C N R 124 U N1 N N N 125 U C2 C N N 126 U O2 O N N 127 U N3 N N N 128 U C4 C N N 129 U O4 O N N 130 U C5 C N N 131 U C6 C N N 132 U HOP3 H N N 133 U HOP2 H N N 134 U "H5'" H N N 135 U "H5''" H N N 136 U "H4'" H N N 137 U "H3'" H N N 138 U "HO3'" H N N 139 U "H2'" H N N 140 U "HO2'" H N N 141 U "H1'" H N N 142 U H3 H N N 143 U H5 H N N 144 U H6 H N N 145 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C OP3 P sing N N 1 C OP3 HOP3 sing N N 2 C P OP1 doub N N 3 C P OP2 sing N N 4 C P "O5'" sing N N 5 C OP2 HOP2 sing N N 6 C "O5'" "C5'" sing N N 7 C "C5'" "C4'" sing N N 8 C "C5'" "H5'" sing N N 9 C "C5'" "H5''" sing N N 10 C "C4'" "O4'" sing N N 11 C "C4'" "C3'" sing N N 12 C "C4'" "H4'" sing N N 13 C "O4'" "C1'" sing N N 14 C "C3'" "O3'" sing N N 15 C "C3'" "C2'" sing N N 16 C "C3'" "H3'" sing N N 17 C "O3'" "HO3'" sing N N 18 C "C2'" "O2'" sing N N 19 C "C2'" "C1'" sing N N 20 C "C2'" "H2'" sing N N 21 C "O2'" "HO2'" sing N N 22 C "C1'" N1 sing N N 23 C "C1'" "H1'" sing N N 24 C N1 C2 sing N N 25 C N1 C6 sing N N 26 C C2 O2 doub N N 27 C C2 N3 sing N N 28 C N3 C4 doub N N 29 C C4 N4 sing N N 30 C C4 C5 sing N N 31 C N4 H41 sing N N 32 C N4 H42 sing N N 33 C C5 C6 doub N N 34 C C5 H5 sing N N 35 C C6 H6 sing N N 36 CBR BR C5 sing N N 37 CBR P OP1 doub N N 38 CBR P OP2 sing N N 39 CBR P "O5'" sing N N 40 CBR P OP3 sing N N 41 CBR OP2 HOP2 sing N N 42 CBR "O5'" "C5'" sing N N 43 CBR N1 C6 sing N N 44 CBR N1 C2 sing N N 45 CBR N1 "C1'" sing N N 46 CBR C6 C5 doub N N 47 CBR C6 H6 sing N N 48 CBR C2 O2 doub N N 49 CBR C2 N3 sing N N 50 CBR N3 C4 doub N N 51 CBR C4 N4 sing N N 52 CBR C4 C5 sing N N 53 CBR N4 H41 sing N N 54 CBR N4 H42 sing N N 55 CBR "C2'" "C1'" sing N N 56 CBR "C2'" "C3'" sing N N 57 CBR "C2'" "H2'" sing N N 58 CBR "C2'" "H2''" sing N N 59 CBR "C5'" "C4'" sing N N 60 CBR "C5'" "H5'" sing N N 61 CBR "C5'" "H5''" sing N N 62 CBR "C4'" "O4'" sing N N 63 CBR "C4'" "C3'" sing N N 64 CBR "C4'" "H4'" sing N N 65 CBR "O4'" "C1'" sing N N 66 CBR "C1'" "H1'" sing N N 67 CBR "C3'" "O3'" sing N N 68 CBR "C3'" "H3'" sing N N 69 CBR "O3'" "HO3'" sing N N 70 CBR OP3 HOP3 sing N N 71 G OP3 P sing N N 72 G OP3 HOP3 sing N N 73 G P OP1 doub N N 74 G P OP2 sing N N 75 G P "O5'" sing N N 76 G OP2 HOP2 sing N N 77 G "O5'" "C5'" sing N N 78 G "C5'" "C4'" sing N N 79 G "C5'" "H5'" sing N N 80 G "C5'" "H5''" sing N N 81 G "C4'" "O4'" sing N N 82 G "C4'" "C3'" sing N N 83 G "C4'" "H4'" sing N N 84 G "O4'" "C1'" sing N N 85 G "C3'" "O3'" sing N N 86 G "C3'" "C2'" sing N N 87 G "C3'" "H3'" sing N N 88 G "O3'" "HO3'" sing N N 89 G "C2'" "O2'" sing N N 90 G "C2'" "C1'" sing N N 91 G "C2'" "H2'" sing N N 92 G "O2'" "HO2'" sing N N 93 G "C1'" N9 sing N N 94 G "C1'" "H1'" sing N N 95 G N9 C8 sing Y N 96 G N9 C4 sing Y N 97 G C8 N7 doub Y N 98 G C8 H8 sing N N 99 G N7 C5 sing Y N 100 G C5 C6 sing N N 101 G C5 C4 doub Y N 102 G C6 O6 doub N N 103 G C6 N1 sing N N 104 G N1 C2 sing N N 105 G N1 H1 sing N N 106 G C2 N2 sing N N 107 G C2 N3 doub N N 108 G N2 H21 sing N N 109 G N2 H22 sing N N 110 G N3 C4 sing N N 111 HOH O H1 sing N N 112 HOH O H2 sing N N 113 U OP3 P sing N N 114 U OP3 HOP3 sing N N 115 U P OP1 doub N N 116 U P OP2 sing N N 117 U P "O5'" sing N N 118 U OP2 HOP2 sing N N 119 U "O5'" "C5'" sing N N 120 U "C5'" "C4'" sing N N 121 U "C5'" "H5'" sing N N 122 U "C5'" "H5''" sing N N 123 U "C4'" "O4'" sing N N 124 U "C4'" "C3'" sing N N 125 U "C4'" "H4'" sing N N 126 U "O4'" "C1'" sing N N 127 U "C3'" "O3'" sing N N 128 U "C3'" "C2'" sing N N 129 U "C3'" "H3'" sing N N 130 U "O3'" "HO3'" sing N N 131 U "C2'" "O2'" sing N N 132 U "C2'" "C1'" sing N N 133 U "C2'" "H2'" sing N N 134 U "O2'" "HO2'" sing N N 135 U "C1'" N1 sing N N 136 U "C1'" "H1'" sing N N 137 U N1 C2 sing N N 138 U N1 C6 sing N N 139 U C2 O2 doub N N 140 U C2 N3 sing N N 141 U N3 C4 sing N N 142 U N3 H3 sing N N 143 U C4 O4 doub N N 144 U C4 C5 sing N N 145 U C5 C6 doub N N 146 U C5 H5 sing N N 147 U C6 H6 sing N N 148 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2G91 'a-form double helix' 2G91 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B CBR 8 1_555 -0.279 -0.067 0.208 1.141 -8.670 -2.120 1 A_G1:CBR17_B A 1 ? B 17 ? 19 1 1 A G 2 1_555 B C 7 1_555 -0.226 -0.080 0.050 -0.379 -15.326 1.715 2 A_G2:C16_B A 2 ? B 16 ? 19 1 1 A U 3 1_555 B G 6 1_555 2.336 -0.412 0.236 -3.415 -15.631 2.439 3 A_U3:G15_B A 3 ? B 15 ? 28 ? 1 A G 4 1_555 B C 5 1_555 -0.195 -0.066 -0.004 -2.455 -11.588 -0.105 4 A_G4:C14_B A 4 ? B 14 ? 19 1 1 A C 5 1_555 B G 4 1_555 0.246 -0.074 0.050 1.873 -8.597 -2.461 5 A_C5:G13_B A 5 ? B 13 ? 19 1 1 A G 6 1_555 B U 3 1_555 -2.281 -0.466 0.072 0.539 -16.413 1.924 6 A_G6:U12_B A 6 ? B 12 ? 28 ? 1 A C 7 1_555 B G 2 1_555 0.175 -0.010 0.126 -0.438 -15.839 2.882 7 A_C7:G11_B A 7 ? B 11 ? 19 1 1 A CBR 8 1_555 B G 1 1_555 0.199 -0.099 0.023 -0.648 -12.655 -1.297 8 A_CBR8:G10_B A 8 ? B 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B CBR 8 1_555 A G 2 1_555 B C 7 1_555 0.423 -1.908 3.302 -1.414 5.751 34.538 -4.002 -0.907 2.937 9.599 2.361 35.027 1 AA_G1G2:C16CBR17_BB A 1 ? B 17 ? A 2 ? B 16 ? 1 A G 2 1_555 B C 7 1_555 A U 3 1_555 B G 6 1_555 -0.052 -1.400 3.375 0.098 5.557 41.512 -2.542 0.083 3.170 7.798 -0.137 41.866 2 AA_G2U3:G15C16_BB A 2 ? B 16 ? A 3 ? B 15 ? 1 A U 3 1_555 B G 6 1_555 A G 4 1_555 B C 5 1_555 -0.758 -1.584 2.938 3.964 15.843 23.775 -5.821 2.183 1.473 33.818 -8.462 28.777 3 AA_U3G4:C14G15_BB A 3 ? B 15 ? A 4 ? B 14 ? 1 A G 4 1_555 B C 5 1_555 A C 5 1_555 B G 4 1_555 0.087 -1.229 3.229 0.598 8.187 31.562 -3.533 -0.058 2.831 14.741 -1.076 32.585 4 AA_G4C5:G13C14_BB A 4 ? B 14 ? A 5 ? B 13 ? 1 A C 5 1_555 B G 4 1_555 A G 6 1_555 B U 3 1_555 1.786 -2.301 3.132 2.182 13.647 19.842 -8.865 -3.732 1.452 34.683 -5.546 24.141 5 AA_C5G6:U12G13_BB A 5 ? B 13 ? A 6 ? B 12 ? 1 A G 6 1_555 B U 3 1_555 A C 7 1_555 B G 2 1_555 -0.196 -1.400 3.361 -1.175 0.882 41.004 -2.096 0.149 3.335 1.259 1.676 41.029 6 AA_G6C7:G11U12_BB A 6 ? B 12 ? A 7 ? B 11 ? 1 A C 7 1_555 B G 2 1_555 A CBR 8 1_555 B G 1 1_555 -0.648 -1.608 3.261 0.702 4.708 32.471 -3.624 1.264 2.990 8.363 -1.247 32.809 7 AA_C7CBR8:G10G11_BB A 7 ? B 11 ? A 8 ? B 10 ? # _atom_sites.entry_id 2G91 _atom_sites.fract_transf_matrix[1][1] 0.022306 _atom_sites.fract_transf_matrix[1][2] 0.012879 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025757 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007942 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O P # loop_