data_2GS4 # _entry.id 2GS4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2GS4 RCSB RCSB037486 WWPDB D_1000037486 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2GS4 _pdbx_database_status.recvd_initial_deposition_date 2006-04-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hindupur, A.' 1 'Liu, D.' 2 'Zhao, Y.' 3 'Bellamy, H.D.' 4 'White, M.A.' 5 'Fox, R.O.' 6 # _citation.id primary _citation.title 'The crystal structure of the E. coli stress protein YciF.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 15 _citation.page_first 2605 _citation.page_last 2611 _citation.year 2006 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17001035 _citation.pdbx_database_id_DOI 10.1110/ps.062307706 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hindupur, A.' 1 primary 'Liu, D.' 2 primary 'Zhao, Y.' 3 primary 'Bellamy, H.D.' 4 primary 'White, M.A.' 5 primary 'Fox, R.O.' 6 # _cell.entry_id 2GS4 _cell.length_a 79.87 _cell.length_b 79.87 _cell.length_c 131.24 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2GS4 _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein yciF' 18812.756 2 ? ? ? ? 2 water nat water 18.015 118 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)N(MSE)KTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKR (MSE)KCVA(MSE)EGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEK ATDIKLTDLAINNVNKKAENKA ; _entity_poly.pdbx_seq_one_letter_code_can ;MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEG LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNK KAENKA ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ASN n 1 3 MSE n 1 4 LYS n 1 5 THR n 1 6 ILE n 1 7 GLU n 1 8 ASP n 1 9 VAL n 1 10 PHE n 1 11 ILE n 1 12 HIS n 1 13 LEU n 1 14 LEU n 1 15 SER n 1 16 ASP n 1 17 THR n 1 18 TYR n 1 19 SER n 1 20 ALA n 1 21 GLU n 1 22 LYS n 1 23 GLN n 1 24 LEU n 1 25 THR n 1 26 ARG n 1 27 ALA n 1 28 LEU n 1 29 ALA n 1 30 LYS n 1 31 LEU n 1 32 ALA n 1 33 ARG n 1 34 ALA n 1 35 THR n 1 36 SER n 1 37 ASN n 1 38 GLU n 1 39 LYS n 1 40 LEU n 1 41 SER n 1 42 GLN n 1 43 ALA n 1 44 PHE n 1 45 HIS n 1 46 ALA n 1 47 HIS n 1 48 LEU n 1 49 GLU n 1 50 GLU n 1 51 THR n 1 52 HIS n 1 53 GLY n 1 54 GLN n 1 55 ILE n 1 56 GLU n 1 57 ARG n 1 58 ILE n 1 59 ASP n 1 60 GLN n 1 61 VAL n 1 62 VAL n 1 63 GLU n 1 64 SER n 1 65 GLU n 1 66 SER n 1 67 ASN n 1 68 LEU n 1 69 LYS n 1 70 ILE n 1 71 LYS n 1 72 ARG n 1 73 MSE n 1 74 LYS n 1 75 CYS n 1 76 VAL n 1 77 ALA n 1 78 MSE n 1 79 GLU n 1 80 GLY n 1 81 LEU n 1 82 ILE n 1 83 GLU n 1 84 GLU n 1 85 ALA n 1 86 ASN n 1 87 GLU n 1 88 VAL n 1 89 ILE n 1 90 GLU n 1 91 SER n 1 92 THR n 1 93 GLU n 1 94 LYS n 1 95 ASN n 1 96 GLU n 1 97 VAL n 1 98 ARG n 1 99 ASP n 1 100 ALA n 1 101 ALA n 1 102 LEU n 1 103 ILE n 1 104 ALA n 1 105 ALA n 1 106 ALA n 1 107 GLN n 1 108 LYS n 1 109 VAL n 1 110 GLU n 1 111 HIS n 1 112 TYR n 1 113 GLU n 1 114 ILE n 1 115 ALA n 1 116 SER n 1 117 TYR n 1 118 GLY n 1 119 THR n 1 120 LEU n 1 121 ALA n 1 122 THR n 1 123 LEU n 1 124 ALA n 1 125 GLU n 1 126 GLN n 1 127 LEU n 1 128 GLY n 1 129 TYR n 1 130 ARG n 1 131 LYS n 1 132 ALA n 1 133 ALA n 1 134 LYS n 1 135 LEU n 1 136 LEU n 1 137 LYS n 1 138 GLU n 1 139 THR n 1 140 LEU n 1 141 GLU n 1 142 GLU n 1 143 GLU n 1 144 LYS n 1 145 ALA n 1 146 THR n 1 147 ASP n 1 148 ILE n 1 149 LYS n 1 150 LEU n 1 151 THR n 1 152 ASP n 1 153 LEU n 1 154 ALA n 1 155 ILE n 1 156 ASN n 1 157 ASN n 1 158 VAL n 1 159 ASN n 1 160 LYS n 1 161 LYS n 1 162 ALA n 1 163 GLU n 1 164 ASN n 1 165 LYS n 1 166 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene yciF _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'K-12 MG1655' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli str. K-12 substr. DH10B' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 316385 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain DH10B _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p215 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YCIF_ECOLI _struct_ref.pdbx_db_accession P21362 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEG LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNK KAENKA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2GS4 A 1 ? 166 ? P21362 1 ? 166 ? 1 166 2 1 2GS4 B 1 ? 166 ? P21362 1 ? 166 ? 1 166 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2GS4 MSE A 1 ? UNP P21362 MET 1 'MODIFIED RESIDUE' 1 1 1 2GS4 MSE A 3 ? UNP P21362 MET 3 'MODIFIED RESIDUE' 3 2 1 2GS4 MSE A 73 ? UNP P21362 MET 73 'MODIFIED RESIDUE' 73 3 1 2GS4 MSE A 78 ? UNP P21362 MET 78 'MODIFIED RESIDUE' 78 4 2 2GS4 MSE B 1 ? UNP P21362 MET 1 'MODIFIED RESIDUE' 1 5 2 2GS4 MSE B 3 ? UNP P21362 MET 3 'MODIFIED RESIDUE' 3 6 2 2GS4 MSE B 73 ? UNP P21362 MET 73 'MODIFIED RESIDUE' 73 7 2 2GS4 MSE B 78 ? UNP P21362 MET 78 'MODIFIED RESIDUE' 78 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2GS4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.pdbx_details '0.1M citric acid pH 3.5-4.0, 1.9-2.1M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-08-28 _diffrn_detector.details 'Channel Cut Monochromator' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) Channel Cut' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9794 1.0 2 0.9797 1.0 3 0.9252 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CAMD BEAMLINE GCPCC' _diffrn_source.pdbx_synchrotron_site CAMD _diffrn_source.pdbx_synchrotron_beamline GCPCC _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9794, 0.9797, 0.9252' # _reflns.entry_id 2GS4 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 19196 _reflns.number_all 19196 _reflns.percent_possible_obs 91.0 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rsym_value 0.073 _reflns.pdbx_netI_over_sigmaI 22.6 _reflns.B_iso_Wilson_estimate 31.0 _reflns.pdbx_redundancy 3.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 91.6 _reflns_shell.Rmerge_I_obs 0.199 _reflns_shell.pdbx_Rsym_value 0.199 _reflns_shell.meanI_over_sigI_obs 5.3 _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1913 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2GS4 _refine.ls_number_reflns_obs 19178 _refine.ls_number_reflns_all 19196 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 3476612.91 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.49 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 91.0 _refine.ls_R_factor_obs 0.183 _refine.ls_R_factor_all 0.217 _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.224 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 907 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 30.8 _refine.aniso_B[1][1] -0.02 _refine.aniso_B[2][2] -0.02 _refine.aniso_B[3][3] 0.04 _refine.aniso_B[1][2] 1.25 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.398518 _refine.solvent_model_param_bsol 58.9908 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model RESOLVE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model variable _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details SHELLS _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2GS4 _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.11 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.25 _refine_analyze.Luzzati_sigma_a_free 0.15 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2459 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 118 _refine_hist.number_atoms_total 2577 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 29.49 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 17.7 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.82 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.03 _refine_ls_shell.number_reflns_R_work 880 _refine_ls_shell.R_factor_R_work 0.402 _refine_ls_shell.percent_reflns_obs 90.7 _refine_ls_shell.R_factor_R_free 0.361 _refine_ls_shell.R_factor_R_free_error 0.049 _refine_ls_shell.percent_reflns_R_free 5.9 _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 880 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 ligand.param ligand.top 'X-RAY DIFFRACTION' # _struct.entry_id 2GS4 _struct.title 'The crystal structure of the E.coli stress protein YciF.' _struct.pdbx_descriptor 'Protein yciF' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2GS4 _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'STRESS PROTEINS, RUBRERYTHRIN, Metal Binding Protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 5 ? ALA A 34 ? THR A 5 ALA A 34 1 ? 30 HELX_P HELX_P2 2 ASN A 37 ? SER A 64 ? ASN A 37 SER A 64 1 ? 28 HELX_P HELX_P3 3 CYS A 75 ? GLU A 90 ? CYS A 75 GLU A 90 1 ? 16 HELX_P HELX_P4 4 LYS A 94 ? LEU A 127 ? LYS A 94 LEU A 127 1 ? 34 HELX_P HELX_P5 5 TYR A 129 ? LYS A 160 ? TYR A 129 LYS A 160 1 ? 32 HELX_P HELX_P6 6 THR B 5 ? THR B 35 ? THR B 5 THR B 35 1 ? 31 HELX_P HELX_P7 7 ASN B 37 ? SER B 64 ? ASN B 37 SER B 64 1 ? 28 HELX_P HELX_P8 8 CYS B 75 ? SER B 91 ? CYS B 75 SER B 91 1 ? 17 HELX_P HELX_P9 9 ASN B 95 ? GLY B 128 ? ASN B 95 GLY B 128 1 ? 34 HELX_P HELX_P10 10 TYR B 129 ? ASN B 156 ? TYR B 129 ASN B 156 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 3 C ? ? ? 1_555 A LYS 4 N ? ? A MSE 3 A LYS 4 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? A ARG 72 C ? ? ? 1_555 A MSE 73 N ? ? A ARG 72 A MSE 73 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A MSE 73 C ? ? ? 1_555 A LYS 74 N ? ? A MSE 73 A LYS 74 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? A ALA 77 C ? ? ? 1_555 A MSE 78 N ? ? A ALA 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale ? ? A MSE 78 C ? ? ? 1_555 A GLU 79 N ? ? A MSE 78 A GLU 79 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? B ARG 72 C ? ? ? 1_555 B MSE 73 N ? ? B ARG 72 B MSE 73 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? B MSE 73 C ? ? ? 1_555 B LYS 74 N ? ? B MSE 73 B LYS 74 1_555 ? ? ? ? ? ? ? 1.323 ? covale8 covale ? ? B ALA 77 C ? ? ? 1_555 B MSE 78 N ? ? B ALA 77 B MSE 78 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale ? ? B MSE 78 C ? ? ? 1_555 B GLU 79 N ? ? B MSE 78 B GLU 79 1_555 ? ? ? ? ? ? ? 1.336 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2GS4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2GS4 _atom_sites.fract_transf_matrix[1][1] 0.012520 _atom_sites.fract_transf_matrix[1][2] 0.007229 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014457 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007620 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 ASN 2 2 ? ? ? A . n A 1 3 MSE 3 3 3 MSE MSE A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 HIS 47 47 47 HIS HIS A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 MSE 73 73 73 MSE MSE A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 MSE 78 78 78 MSE MSE A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 TYR 112 112 112 TYR TYR A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 TYR 117 117 117 TYR TYR A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 ASN 157 157 157 ASN ASN A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 ALA 162 162 ? ? ? A . n A 1 163 GLU 163 163 ? ? ? A . n A 1 164 ASN 164 164 ? ? ? A . n A 1 165 LYS 165 165 ? ? ? A . n A 1 166 ALA 166 166 ? ? ? A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 ASN 2 2 ? ? ? B . n B 1 3 MSE 3 3 ? ? ? B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 PHE 10 10 10 PHE PHE B . n B 1 11 ILE 11 11 11 ILE ILE B . n B 1 12 HIS 12 12 12 HIS HIS B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 THR 17 17 17 THR THR B . n B 1 18 TYR 18 18 18 TYR TYR B . n B 1 19 SER 19 19 19 SER SER B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 GLN 23 23 23 GLN GLN B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 ALA 32 32 32 ALA ALA B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 THR 35 35 35 THR THR B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 GLN 42 42 42 GLN GLN B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 PHE 44 44 44 PHE PHE B . n B 1 45 HIS 45 45 45 HIS HIS B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 HIS 47 47 47 HIS HIS B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 THR 51 51 51 THR THR B . n B 1 52 HIS 52 52 52 HIS HIS B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 GLN 54 54 54 GLN GLN B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 ASP 59 59 59 ASP ASP B . n B 1 60 GLN 60 60 60 GLN GLN B . n B 1 61 VAL 61 61 61 VAL VAL B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 SER 66 66 66 SER SER B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 LYS 69 69 69 LYS LYS B . n B 1 70 ILE 70 70 70 ILE ILE B . n B 1 71 LYS 71 71 71 LYS LYS B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 MSE 73 73 73 MSE MSE B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 CYS 75 75 75 CYS CYS B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 ALA 77 77 77 ALA ALA B . n B 1 78 MSE 78 78 78 MSE MSE B . n B 1 79 GLU 79 79 79 GLU GLU B . n B 1 80 GLY 80 80 80 GLY GLY B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 GLU 83 83 83 GLU GLU B . n B 1 84 GLU 84 84 84 GLU GLU B . n B 1 85 ALA 85 85 85 ALA ALA B . n B 1 86 ASN 86 86 86 ASN ASN B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 ILE 89 89 89 ILE ILE B . n B 1 90 GLU 90 90 90 GLU GLU B . n B 1 91 SER 91 91 91 SER SER B . n B 1 92 THR 92 92 92 THR THR B . n B 1 93 GLU 93 93 93 GLU GLU B . n B 1 94 LYS 94 94 94 LYS LYS B . n B 1 95 ASN 95 95 95 ASN ASN B . n B 1 96 GLU 96 96 96 GLU GLU B . n B 1 97 VAL 97 97 97 VAL VAL B . n B 1 98 ARG 98 98 98 ARG ARG B . n B 1 99 ASP 99 99 99 ASP ASP B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 LEU 102 102 102 LEU LEU B . n B 1 103 ILE 103 103 103 ILE ILE B . n B 1 104 ALA 104 104 104 ALA ALA B . n B 1 105 ALA 105 105 105 ALA ALA B . n B 1 106 ALA 106 106 106 ALA ALA B . n B 1 107 GLN 107 107 107 GLN GLN B . n B 1 108 LYS 108 108 108 LYS LYS B . n B 1 109 VAL 109 109 109 VAL VAL B . n B 1 110 GLU 110 110 110 GLU GLU B . n B 1 111 HIS 111 111 111 HIS HIS B . n B 1 112 TYR 112 112 112 TYR TYR B . n B 1 113 GLU 113 113 113 GLU GLU B . n B 1 114 ILE 114 114 114 ILE ILE B . n B 1 115 ALA 115 115 115 ALA ALA B . n B 1 116 SER 116 116 116 SER SER B . n B 1 117 TYR 117 117 117 TYR TYR B . n B 1 118 GLY 118 118 118 GLY GLY B . n B 1 119 THR 119 119 119 THR THR B . n B 1 120 LEU 120 120 120 LEU LEU B . n B 1 121 ALA 121 121 121 ALA ALA B . n B 1 122 THR 122 122 122 THR THR B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 GLU 125 125 125 GLU GLU B . n B 1 126 GLN 126 126 126 GLN GLN B . n B 1 127 LEU 127 127 127 LEU LEU B . n B 1 128 GLY 128 128 128 GLY GLY B . n B 1 129 TYR 129 129 129 TYR TYR B . n B 1 130 ARG 130 130 130 ARG ARG B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 ALA 132 132 132 ALA ALA B . n B 1 133 ALA 133 133 133 ALA ALA B . n B 1 134 LYS 134 134 134 LYS LYS B . n B 1 135 LEU 135 135 135 LEU LEU B . n B 1 136 LEU 136 136 136 LEU LEU B . n B 1 137 LYS 137 137 137 LYS LYS B . n B 1 138 GLU 138 138 138 GLU GLU B . n B 1 139 THR 139 139 139 THR THR B . n B 1 140 LEU 140 140 140 LEU LEU B . n B 1 141 GLU 141 141 141 GLU GLU B . n B 1 142 GLU 142 142 142 GLU GLU B . n B 1 143 GLU 143 143 143 GLU GLU B . n B 1 144 LYS 144 144 144 LYS LYS B . n B 1 145 ALA 145 145 145 ALA ALA B . n B 1 146 THR 146 146 146 THR THR B . n B 1 147 ASP 147 147 147 ASP ASP B . n B 1 148 ILE 148 148 148 ILE ILE B . n B 1 149 LYS 149 149 149 LYS LYS B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 THR 151 151 151 THR THR B . n B 1 152 ASP 152 152 152 ASP ASP B . n B 1 153 LEU 153 153 153 LEU LEU B . n B 1 154 ALA 154 154 154 ALA ALA B . n B 1 155 ILE 155 155 155 ILE ILE B . n B 1 156 ASN 156 156 156 ASN ASN B . n B 1 157 ASN 157 157 157 ASN ASN B . n B 1 158 VAL 158 158 ? ? ? B . n B 1 159 ASN 159 159 ? ? ? B . n B 1 160 LYS 160 160 ? ? ? B . n B 1 161 LYS 161 161 ? ? ? B . n B 1 162 ALA 162 162 ? ? ? B . n B 1 163 GLU 163 163 ? ? ? B . n B 1 164 ASN 164 164 ? ? ? B . n B 1 165 LYS 165 165 ? ? ? B . n B 1 166 ALA 166 166 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 405 405 HOH HOH A . C 2 HOH 2 406 406 HOH HOH A . C 2 HOH 3 409 409 HOH HOH A . C 2 HOH 4 411 411 HOH HOH A . C 2 HOH 5 412 412 HOH HOH A . C 2 HOH 6 413 413 HOH HOH A . C 2 HOH 7 414 414 HOH HOH A . C 2 HOH 8 417 417 HOH HOH A . C 2 HOH 9 423 423 HOH HOH A . C 2 HOH 10 426 426 HOH HOH A . C 2 HOH 11 427 427 HOH HOH A . C 2 HOH 12 429 429 HOH HOH A . C 2 HOH 13 440 440 HOH HOH A . C 2 HOH 14 441 441 HOH HOH A . C 2 HOH 15 443 443 HOH HOH A . C 2 HOH 16 444 444 HOH HOH A . C 2 HOH 17 447 447 HOH HOH A . C 2 HOH 18 450 450 HOH HOH A . C 2 HOH 19 451 451 HOH HOH A . C 2 HOH 20 452 452 HOH HOH A . C 2 HOH 21 454 454 HOH HOH A . C 2 HOH 22 455 455 HOH HOH A . C 2 HOH 23 459 459 HOH HOH A . C 2 HOH 24 460 460 HOH HOH A . C 2 HOH 25 461 461 HOH HOH A . C 2 HOH 26 462 462 HOH HOH A . C 2 HOH 27 464 464 HOH HOH A . C 2 HOH 28 465 465 HOH HOH A . C 2 HOH 29 467 467 HOH HOH A . C 2 HOH 30 468 468 HOH HOH A . C 2 HOH 31 469 469 HOH HOH A . C 2 HOH 32 470 470 HOH HOH A . C 2 HOH 33 471 471 HOH HOH A . C 2 HOH 34 476 476 HOH HOH A . C 2 HOH 35 477 477 HOH HOH A . C 2 HOH 36 490 490 HOH HOH A . C 2 HOH 37 492 492 HOH HOH A . C 2 HOH 38 494 494 HOH HOH A . C 2 HOH 39 496 496 HOH HOH A . C 2 HOH 40 499 499 HOH HOH A . C 2 HOH 41 500 500 HOH HOH A . C 2 HOH 42 504 504 HOH HOH A . C 2 HOH 43 505 505 HOH HOH A . C 2 HOH 44 506 506 HOH HOH A . C 2 HOH 45 507 507 HOH HOH A . C 2 HOH 46 514 514 HOH HOH A . C 2 HOH 47 516 516 HOH HOH A . C 2 HOH 48 518 518 HOH HOH A . D 2 HOH 1 401 401 HOH HOH B . D 2 HOH 2 402 402 HOH HOH B . D 2 HOH 3 403 403 HOH HOH B . D 2 HOH 4 404 404 HOH HOH B . D 2 HOH 5 407 407 HOH HOH B . D 2 HOH 6 408 408 HOH HOH B . D 2 HOH 7 410 410 HOH HOH B . D 2 HOH 8 415 415 HOH HOH B . D 2 HOH 9 416 416 HOH HOH B . D 2 HOH 10 418 418 HOH HOH B . D 2 HOH 11 419 419 HOH HOH B . D 2 HOH 12 420 420 HOH HOH B . D 2 HOH 13 421 421 HOH HOH B . D 2 HOH 14 422 422 HOH HOH B . D 2 HOH 15 424 424 HOH HOH B . D 2 HOH 16 425 425 HOH HOH B . D 2 HOH 17 428 428 HOH HOH B . D 2 HOH 18 430 430 HOH HOH B . D 2 HOH 19 431 431 HOH HOH B . D 2 HOH 20 432 432 HOH HOH B . D 2 HOH 21 433 433 HOH HOH B . D 2 HOH 22 434 434 HOH HOH B . D 2 HOH 23 435 435 HOH HOH B . D 2 HOH 24 436 436 HOH HOH B . D 2 HOH 25 437 437 HOH HOH B . D 2 HOH 26 438 438 HOH HOH B . D 2 HOH 27 439 439 HOH HOH B . D 2 HOH 28 442 442 HOH HOH B . D 2 HOH 29 445 445 HOH HOH B . D 2 HOH 30 446 446 HOH HOH B . D 2 HOH 31 448 448 HOH HOH B . D 2 HOH 32 449 449 HOH HOH B . D 2 HOH 33 453 453 HOH HOH B . D 2 HOH 34 456 456 HOH HOH B . D 2 HOH 35 457 457 HOH HOH B . D 2 HOH 36 458 458 HOH HOH B . D 2 HOH 37 463 463 HOH HOH B . D 2 HOH 38 466 466 HOH HOH B . D 2 HOH 39 472 472 HOH HOH B . D 2 HOH 40 473 473 HOH HOH B . D 2 HOH 41 474 474 HOH HOH B . D 2 HOH 42 475 475 HOH HOH B . D 2 HOH 43 478 478 HOH HOH B . D 2 HOH 44 479 479 HOH HOH B . D 2 HOH 45 480 480 HOH HOH B . D 2 HOH 46 481 481 HOH HOH B . D 2 HOH 47 482 482 HOH HOH B . D 2 HOH 48 483 483 HOH HOH B . D 2 HOH 49 484 484 HOH HOH B . D 2 HOH 50 485 485 HOH HOH B . D 2 HOH 51 486 486 HOH HOH B . D 2 HOH 52 487 487 HOH HOH B . D 2 HOH 53 488 488 HOH HOH B . D 2 HOH 54 489 489 HOH HOH B . D 2 HOH 55 491 491 HOH HOH B . D 2 HOH 56 493 493 HOH HOH B . D 2 HOH 57 495 495 HOH HOH B . D 2 HOH 58 497 497 HOH HOH B . D 2 HOH 59 498 498 HOH HOH B . D 2 HOH 60 501 501 HOH HOH B . D 2 HOH 61 502 502 HOH HOH B . D 2 HOH 62 503 503 HOH HOH B . D 2 HOH 63 508 508 HOH HOH B . D 2 HOH 64 509 509 HOH HOH B . D 2 HOH 65 510 510 HOH HOH B . D 2 HOH 66 511 511 HOH HOH B . D 2 HOH 67 512 512 HOH HOH B . D 2 HOH 68 513 513 HOH HOH B . D 2 HOH 69 515 515 HOH HOH B . D 2 HOH 70 517 517 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 3 A MSE 3 ? MET SELENOMETHIONINE 2 A MSE 73 A MSE 73 ? MET SELENOMETHIONINE 3 A MSE 78 A MSE 78 ? MET SELENOMETHIONINE 4 B MSE 73 B MSE 73 ? MET SELENOMETHIONINE 5 B MSE 78 B MSE 78 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA hexameric 6 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2,3 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2070 ? 1 MORE -15 ? 1 'SSA (A^2)' 14800 ? 2 'ABSA (A^2)' 12890 ? 2 MORE -61 ? 2 'SSA (A^2)' 37720 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 39.9350000000 0.8660254038 -0.5000000000 0.0000000000 69.1694490003 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -39.9350000000 -0.8660254038 -0.5000000000 0.0000000000 69.1694490003 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-17 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 4 ? ? -150.50 -26.46 2 1 ASN A 95 ? ? 33.59 -114.35 3 1 ASN B 156 ? ? -98.32 55.56 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A ASN 2 ? A ASN 2 3 1 Y 1 A ALA 162 ? A ALA 162 4 1 Y 1 A GLU 163 ? A GLU 163 5 1 Y 1 A ASN 164 ? A ASN 164 6 1 Y 1 A LYS 165 ? A LYS 165 7 1 Y 1 A ALA 166 ? A ALA 166 8 1 Y 1 B MSE 1 ? B MSE 1 9 1 Y 1 B ASN 2 ? B ASN 2 10 1 Y 1 B MSE 3 ? B MSE 3 11 1 Y 1 B VAL 158 ? B VAL 158 12 1 Y 1 B ASN 159 ? B ASN 159 13 1 Y 1 B LYS 160 ? B LYS 160 14 1 Y 1 B LYS 161 ? B LYS 161 15 1 Y 1 B ALA 162 ? B ALA 162 16 1 Y 1 B GLU 163 ? B GLU 163 17 1 Y 1 B ASN 164 ? B ASN 164 18 1 Y 1 B LYS 165 ? B LYS 165 19 1 Y 1 B ALA 166 ? B ALA 166 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #