data_2H4F # _entry.id 2H4F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2H4F pdb_00002h4f 10.2210/pdb2h4f/pdb RCSB RCSB037916 ? ? WWPDB D_1000037916 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2H4F _pdbx_database_status.recvd_initial_deposition_date 2006-05-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hoff, K.G.' 1 'Avalos, J.L.' 2 'Sens, K.' 3 'Wolberger, C.' 4 # _citation.id primary _citation.title 'Insights into the Sirtuin Mechanism from Ternary Complexes Containing NAD(+) and Acetylated Peptide.' _citation.journal_abbrev Structure _citation.journal_volume 14 _citation.page_first 1231 _citation.page_last 1240 _citation.year 2006 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16905097 _citation.pdbx_database_id_DOI 10.1016/j.str.2006.06.006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hoff, K.G.' 1 ? primary 'Avalos, J.L.' 2 ? primary 'Sens, K.' 3 ? primary 'Wolberger, C.' 4 ? # _cell.entry_id 2H4F _cell.length_a 45.821 _cell.length_b 59.331 _cell.length_c 106.660 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2H4F _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NAD-dependent deacetylase' 27569.793 1 3.5.1.- ? ? ? 2 polymer syn 'Cellular tumor antigen p53' 2139.521 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? 5 water nat water 18.015 70 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Regulatory protein SIR2 homolog' 2 'Tumor suppressor p53, Phosphoprotein p53, Antigen NY-CO-13' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM EEGGIS ; ;MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM EEGGIS ; A ? 2 'polypeptide(L)' no yes 'KKGQSTSRHK(ALY)LMFKTEG' KKGQSTSRHKKLMFKTEG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 MET n 1 4 LYS n 1 5 GLU n 1 6 PHE n 1 7 LEU n 1 8 ASP n 1 9 LEU n 1 10 LEU n 1 11 ASN n 1 12 GLU n 1 13 SER n 1 14 ARG n 1 15 LEU n 1 16 THR n 1 17 VAL n 1 18 THR n 1 19 LEU n 1 20 THR n 1 21 GLY n 1 22 ALA n 1 23 GLY n 1 24 ILE n 1 25 SER n 1 26 THR n 1 27 PRO n 1 28 SER n 1 29 GLY n 1 30 ILE n 1 31 PRO n 1 32 ASP n 1 33 PHE n 1 34 ARG n 1 35 GLY n 1 36 PRO n 1 37 ASN n 1 38 GLY n 1 39 ILE n 1 40 TYR n 1 41 LYS n 1 42 LYS n 1 43 TYR n 1 44 SER n 1 45 GLN n 1 46 ASN n 1 47 VAL n 1 48 PHE n 1 49 ASP n 1 50 ILE n 1 51 ASP n 1 52 PHE n 1 53 PHE n 1 54 TYR n 1 55 SER n 1 56 HIS n 1 57 PRO n 1 58 GLU n 1 59 GLU n 1 60 PHE n 1 61 TYR n 1 62 ARG n 1 63 PHE n 1 64 ALA n 1 65 LYS n 1 66 GLU n 1 67 GLY n 1 68 ILE n 1 69 PHE n 1 70 PRO n 1 71 MET n 1 72 LEU n 1 73 GLN n 1 74 ALA n 1 75 LYS n 1 76 PRO n 1 77 ASN n 1 78 LEU n 1 79 ALA n 1 80 HIS n 1 81 VAL n 1 82 LEU n 1 83 LEU n 1 84 ALA n 1 85 LYS n 1 86 LEU n 1 87 GLU n 1 88 GLU n 1 89 LYS n 1 90 GLY n 1 91 LEU n 1 92 ILE n 1 93 GLU n 1 94 ALA n 1 95 VAL n 1 96 ILE n 1 97 THR n 1 98 GLN n 1 99 ASN n 1 100 ILE n 1 101 ASP n 1 102 ARG n 1 103 LEU n 1 104 HIS n 1 105 GLN n 1 106 ARG n 1 107 ALA n 1 108 GLY n 1 109 SER n 1 110 LYS n 1 111 LYS n 1 112 VAL n 1 113 ILE n 1 114 GLU n 1 115 LEU n 1 116 HIS n 1 117 GLY n 1 118 ASN n 1 119 VAL n 1 120 GLU n 1 121 GLU n 1 122 TYR n 1 123 TYR n 1 124 CYS n 1 125 VAL n 1 126 ARG n 1 127 CYS n 1 128 GLU n 1 129 LYS n 1 130 LYS n 1 131 TYR n 1 132 THR n 1 133 VAL n 1 134 GLU n 1 135 ASP n 1 136 VAL n 1 137 ILE n 1 138 LYS n 1 139 LYS n 1 140 LEU n 1 141 GLU n 1 142 SER n 1 143 SER n 1 144 ASP n 1 145 VAL n 1 146 PRO n 1 147 LEU n 1 148 CYS n 1 149 ASP n 1 150 ASP n 1 151 CYS n 1 152 ASN n 1 153 SER n 1 154 LEU n 1 155 ILE n 1 156 ARG n 1 157 PRO n 1 158 ASN n 1 159 ILE n 1 160 VAL n 1 161 PHE n 1 162 PHE n 1 163 GLY n 1 164 GLU n 1 165 ASN n 1 166 LEU n 1 167 PRO n 1 168 GLN n 1 169 ASP n 1 170 ALA n 1 171 LEU n 1 172 ARG n 1 173 GLU n 1 174 ALA n 1 175 ILE n 1 176 GLY n 1 177 LEU n 1 178 SER n 1 179 SER n 1 180 ARG n 1 181 ALA n 1 182 SER n 1 183 LEU n 1 184 MET n 1 185 ILE n 1 186 VAL n 1 187 LEU n 1 188 GLY n 1 189 SER n 1 190 SER n 1 191 LEU n 1 192 VAL n 1 193 VAL n 1 194 TYR n 1 195 PRO n 1 196 ALA n 1 197 ALA n 1 198 GLU n 1 199 LEU n 1 200 PRO n 1 201 LEU n 1 202 ILE n 1 203 THR n 1 204 VAL n 1 205 ARG n 1 206 SER n 1 207 GLY n 1 208 GLY n 1 209 LYS n 1 210 LEU n 1 211 VAL n 1 212 ILE n 1 213 VAL n 1 214 ASN n 1 215 LEU n 1 216 GLY n 1 217 GLU n 1 218 THR n 1 219 PRO n 1 220 PHE n 1 221 ASP n 1 222 ASP n 1 223 ILE n 1 224 ALA n 1 225 THR n 1 226 LEU n 1 227 LYS n 1 228 TYR n 1 229 ASN n 1 230 MET n 1 231 ASP n 1 232 VAL n 1 233 VAL n 1 234 GLU n 1 235 PHE n 1 236 ALA n 1 237 ARG n 1 238 ARG n 1 239 VAL n 1 240 MET n 1 241 GLU n 1 242 GLU n 1 243 GLY n 1 244 GLY n 1 245 ILE n 1 246 SER n 2 1 LYS n 2 2 LYS n 2 3 GLY n 2 4 GLN n 2 5 SER n 2 6 THR n 2 7 SER n 2 8 ARG n 2 9 HIS n 2 10 LYS n 2 11 ALY n 2 12 LEU n 2 13 MET n 2 14 PHE n 2 15 LYS n 2 16 THR n 2 17 GLU n 2 18 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene npdA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL-21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'F-moc Synthetic construct' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP NPD_THEMA Q9WYW0 1 1 ? ? 2 UNP P53_HUMAN Q9NP68 2 372 ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2H4F A 1 ? 246 ? Q9WYW0 1 ? 246 ? 1 246 2 2 2H4F D 1 ? 18 ? Q9NP68 372 ? 389 ? 1 18 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 2H4F _struct_ref_seq_dif.mon_id ALY _struct_ref_seq_dif.pdbx_pdb_strand_id D _struct_ref_seq_dif.seq_num 11 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9NP68 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 382 _struct_ref_seq_dif.details 'modified residue' _struct_ref_seq_dif.pdbx_auth_seq_num 11 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ALY 'L-peptide linking' n 'N(6)-ACETYLLYSINE' ? 'C8 H16 N2 O3' 188.224 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2H4F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_percent_sol 49.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.6 _exptl_crystal_grow.pdbx_details 'CHES, PEG3350, NAD, pH 9.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 77.36 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-07-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 2H4F _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 20048 _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 2H4F _refine.ls_number_reflns_obs 18976 _refine.ls_number_reflns_all 20000 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 98.35 _refine.ls_R_factor_obs 0.19406 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19226 _refine.ls_R_factor_R_free 0.22823 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1024 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 30.415 _refine.aniso_B[1][1] 0.99 _refine.aniso_B[2][2] 0.36 _refine.aniso_B[3][3] -1.36 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB Entry: 1yc5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.171 _refine.pdbx_overall_ESU_R_Free 0.153 _refine.overall_SU_ML 0.098 _refine.overall_SU_B 3.427 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1933 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 70 _refine_hist.number_atoms_total 2048 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 2014 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.780 2.019 ? 2727 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.858 5.000 ? 243 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.348 24.167 ? 84 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.097 15.000 ? 345 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 28.224 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.144 0.200 ? 314 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1481 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.239 0.200 ? 879 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 1387 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.152 0.200 ? 105 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.231 0.200 ? 44 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.192 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.249 1.500 ? 1279 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.040 2.000 ? 1987 'X-RAY DIFFRACTION' ? r_scbond_it 3.067 3.000 ? 840 'X-RAY DIFFRACTION' ? r_scangle_it 4.953 4.500 ? 740 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.999 _refine_ls_shell.d_res_low 2.051 _refine_ls_shell.number_reflns_R_work 1165 _refine_ls_shell.R_factor_R_work 0.232 _refine_ls_shell.percent_reflns_obs 85.07 _refine_ls_shell.R_factor_R_free 0.244 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2H4F _struct.title 'Sir2-p53 peptide-NAD+' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2H4F _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Sir2 ternary complex, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 3 ? SER A 13 ? MET A 3 SER A 13 1 ? 11 HELX_P HELX_P2 2 ALA A 22 ? GLY A 29 ? ALA A 22 GLY A 29 5 ? 8 HELX_P HELX_P3 3 ASP A 49 ? HIS A 56 ? ASP A 49 HIS A 56 1 ? 8 HELX_P HELX_P4 4 HIS A 56 ? ILE A 68 ? HIS A 56 ILE A 68 1 ? 13 HELX_P HELX_P5 5 PHE A 69 ? ALA A 74 ? PHE A 69 ALA A 74 5 ? 6 HELX_P HELX_P6 6 ASN A 77 ? LYS A 89 ? ASN A 77 LYS A 89 1 ? 13 HELX_P HELX_P7 7 ARG A 102 ? ALA A 107 ? ARG A 102 ALA A 107 1 ? 6 HELX_P HELX_P8 8 VAL A 133 ? LEU A 140 ? VAL A 133 LEU A 140 1 ? 8 HELX_P HELX_P9 9 PRO A 167 ? ALA A 181 ? PRO A 167 ALA A 181 1 ? 15 HELX_P HELX_P10 10 PRO A 195 ? ALA A 197 ? PRO A 195 ALA A 197 5 ? 3 HELX_P HELX_P11 11 GLU A 198 ? GLY A 207 ? GLU A 198 GLY A 207 1 ? 10 HELX_P HELX_P12 12 PHE A 220 ? ALA A 224 ? PHE A 220 ALA A 224 5 ? 5 HELX_P HELX_P13 13 ASP A 231 ? GLY A 243 ? ASP A 231 GLY A 243 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B LYS 10 C ? ? ? 1_555 B ALY 11 N ? ? D LYS 10 D ALY 11 1_555 ? ? ? ? ? ? ? 1.515 ? ? covale2 covale both ? B ALY 11 C ? ? ? 1_555 B LEU 12 N ? ? D ALY 11 D LEU 12 1_555 ? ? ? ? ? ? ? 1.606 ? ? metalc1 metalc ? ? A CYS 124 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 124 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc2 metalc ? ? A CYS 127 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 127 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.120 ? ? metalc3 metalc ? ? A CYS 148 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 148 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc4 metalc ? ? A CYS 151 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 151 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.395 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 194 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 194 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 195 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 195 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.54 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 112 ? GLU A 114 ? VAL A 112 GLU A 114 A 2 ALA A 94 ? THR A 97 ? ALA A 94 THR A 97 A 3 THR A 16 ? THR A 20 ? THR A 16 THR A 20 A 4 LEU A 183 ? LEU A 187 ? LEU A 183 LEU A 187 A 5 LYS A 209 ? VAL A 213 ? LYS A 209 VAL A 213 A 6 LEU A 226 ? TYR A 228 ? LEU A 226 TYR A 228 B 1 LYS A 130 ? THR A 132 ? LYS A 130 THR A 132 B 2 GLY A 117 ? CYS A 124 ? GLY A 117 CYS A 124 B 3 ILE A 155 ? ILE A 159 ? ILE A 155 ILE A 159 C 1 VAL A 193 ? TYR A 194 ? VAL A 193 TYR A 194 C 2 LEU B 12 ? MET B 13 ? LEU D 12 MET D 13 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 113 ? O ILE A 113 N THR A 97 ? N THR A 97 A 2 3 O ILE A 96 ? O ILE A 96 N THR A 18 ? N THR A 18 A 3 4 N LEU A 19 ? N LEU A 19 O ILE A 185 ? O ILE A 185 A 4 5 N VAL A 186 ? N VAL A 186 O VAL A 211 ? O VAL A 211 A 5 6 N ILE A 212 ? N ILE A 212 O TYR A 228 ? O TYR A 228 B 1 2 O TYR A 131 ? O TYR A 131 N TYR A 122 ? N TYR A 122 B 2 3 N GLU A 121 ? N GLU A 121 O ASN A 158 ? O ASN A 158 C 1 2 N TYR A 194 ? N TYR A 194 O LEU B 12 ? O LEU D 12 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 1001 ? 4 'BINDING SITE FOR RESIDUE ZN A 1001' AC2 Software A NAD 702 ? 28 'BINDING SITE FOR RESIDUE NAD A 702' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 124 ? CYS A 124 . ? 1_555 ? 2 AC1 4 CYS A 127 ? CYS A 127 . ? 1_555 ? 3 AC1 4 CYS A 148 ? CYS A 148 . ? 1_555 ? 4 AC1 4 CYS A 151 ? CYS A 151 . ? 1_555 ? 5 AC2 28 GLY A 21 ? GLY A 21 . ? 1_555 ? 6 AC2 28 ALA A 22 ? ALA A 22 . ? 1_555 ? 7 AC2 28 GLY A 23 ? GLY A 23 . ? 1_555 ? 8 AC2 28 THR A 26 ? THR A 26 . ? 1_555 ? 9 AC2 28 PRO A 27 ? PRO A 27 . ? 1_555 ? 10 AC2 28 ILE A 30 ? ILE A 30 . ? 1_555 ? 11 AC2 28 PRO A 31 ? PRO A 31 . ? 1_555 ? 12 AC2 28 ASP A 32 ? ASP A 32 . ? 1_555 ? 13 AC2 28 PHE A 33 ? PHE A 33 . ? 1_555 ? 14 AC2 28 ARG A 34 ? ARG A 34 . ? 1_555 ? 15 AC2 28 GLN A 98 ? GLN A 98 . ? 1_555 ? 16 AC2 28 ASN A 99 ? ASN A 99 . ? 1_555 ? 17 AC2 28 ILE A 100 ? ILE A 100 . ? 1_555 ? 18 AC2 28 ASP A 101 ? ASP A 101 . ? 1_555 ? 19 AC2 28 HIS A 116 ? HIS A 116 . ? 1_555 ? 20 AC2 28 GLY A 188 ? GLY A 188 . ? 1_555 ? 21 AC2 28 SER A 189 ? SER A 189 . ? 1_555 ? 22 AC2 28 SER A 190 ? SER A 190 . ? 1_555 ? 23 AC2 28 ASN A 214 ? ASN A 214 . ? 1_555 ? 24 AC2 28 LEU A 215 ? LEU A 215 . ? 1_555 ? 25 AC2 28 GLY A 216 ? GLY A 216 . ? 1_555 ? 26 AC2 28 MET A 230 ? MET A 230 . ? 1_555 ? 27 AC2 28 ASP A 231 ? ASP A 231 . ? 1_555 ? 28 AC2 28 VAL A 232 ? VAL A 232 . ? 1_555 ? 29 AC2 28 HOH E . ? HOH A 1002 . ? 1_555 ? 30 AC2 28 HOH E . ? HOH A 1010 . ? 1_555 ? 31 AC2 28 HOH E . ? HOH A 1024 . ? 1_555 ? 32 AC2 28 ALY B 11 ? ALY D 11 . ? 1_555 ? # _database_PDB_matrix.entry_id 2H4F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2H4F _atom_sites.fract_transf_matrix[1][1] 0.021824 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016855 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009376 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 ASN 37 37 ? ? ? A . n A 1 38 GLY 38 38 ? ? ? A . n A 1 39 ILE 39 39 ? ? ? A . n A 1 40 TYR 40 40 ? ? ? A . n A 1 41 LYS 41 41 ? ? ? A . n A 1 42 LYS 42 42 ? ? ? A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLU 66 66 66 GLU ALA A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 MET 71 71 71 MET MET A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 HIS 104 104 104 HIS HIS A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 LYS 111 111 111 LYS ALA A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 HIS 116 116 116 HIS HIS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 LYS 138 138 138 LYS ALA A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 CYS 148 148 148 CYS CYS A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 GLN 168 168 168 GLN ALA A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ARG 172 172 172 ARG ALA A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ARG 180 180 180 ARG ARG A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 MET 184 184 184 MET MET A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 SER 190 190 190 SER SER A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 TYR 194 194 194 TYR TYR A . n A 1 195 PRO 195 195 195 PRO PRO A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLU 198 198 198 GLU GLU A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 ARG 205 205 205 ARG ARG A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 VAL 211 211 211 VAL VAL A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 ASN 214 214 214 ASN ASN A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 PRO 219 219 219 PRO PRO A . n A 1 220 PHE 220 220 220 PHE PHE A . n A 1 221 ASP 221 221 221 ASP ASP A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 TYR 228 228 228 TYR TYR A . n A 1 229 ASN 229 229 229 ASN ASN A . n A 1 230 MET 230 230 230 MET MET A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 VAL 233 233 233 VAL VAL A . n A 1 234 GLU 234 234 234 GLU GLU A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 MET 240 240 240 MET MET A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 GLY 244 244 244 GLY GLY A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 SER 246 246 246 SER SER A . n B 2 1 LYS 1 1 ? ? ? D . n B 2 2 LYS 2 2 ? ? ? D . n B 2 3 GLY 3 3 ? ? ? D . n B 2 4 GLN 4 4 ? ? ? D . n B 2 5 SER 5 5 ? ? ? D . n B 2 6 THR 6 6 ? ? ? D . n B 2 7 SER 7 7 7 SER SER D . n B 2 8 ARG 8 8 8 ARG ARG D . n B 2 9 HIS 9 9 9 HIS HIS D . n B 2 10 LYS 10 10 10 LYS LYS D . n B 2 11 ALY 11 11 11 ALY ALY D . n B 2 12 LEU 12 12 12 LEU LEU D . n B 2 13 MET 13 13 13 MET MET D . n B 2 14 PHE 14 14 14 PHE ALA D . n B 2 15 LYS 15 15 ? ? ? D . n B 2 16 THR 16 16 ? ? ? D . n B 2 17 GLU 17 17 ? ? ? D . n B 2 18 GLY 18 18 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 1001 1001 ZN ZN A . D 4 NAD 1 702 702 NAD NAD A . E 5 HOH 1 1002 1 HOH HOH A . E 5 HOH 2 1003 2 HOH HOH A . E 5 HOH 3 1004 3 HOH HOH A . E 5 HOH 4 1005 4 HOH HOH A . E 5 HOH 5 1006 5 HOH HOH A . E 5 HOH 6 1007 6 HOH HOH A . E 5 HOH 7 1008 7 HOH HOH A . E 5 HOH 8 1009 8 HOH HOH A . E 5 HOH 9 1010 9 HOH HOH A . E 5 HOH 10 1011 10 HOH HOH A . E 5 HOH 11 1012 11 HOH HOH A . E 5 HOH 12 1013 14 HOH HOH A . E 5 HOH 13 1014 15 HOH HOH A . E 5 HOH 14 1015 16 HOH HOH A . E 5 HOH 15 1016 17 HOH HOH A . E 5 HOH 16 1017 19 HOH HOH A . E 5 HOH 17 1018 21 HOH HOH A . E 5 HOH 18 1019 22 HOH HOH A . E 5 HOH 19 1020 24 HOH HOH A . E 5 HOH 20 1021 26 HOH HOH A . E 5 HOH 21 1022 28 HOH HOH A . E 5 HOH 22 1023 29 HOH HOH A . E 5 HOH 23 1024 30 HOH HOH A . E 5 HOH 24 1025 32 HOH HOH A . E 5 HOH 25 1026 33 HOH HOH A . E 5 HOH 26 1027 34 HOH HOH A . E 5 HOH 27 1028 36 HOH HOH A . E 5 HOH 28 1029 37 HOH HOH A . E 5 HOH 29 1030 38 HOH HOH A . E 5 HOH 30 1031 39 HOH HOH A . E 5 HOH 31 1032 41 HOH HOH A . E 5 HOH 32 1033 42 HOH HOH A . E 5 HOH 33 1034 44 HOH HOH A . E 5 HOH 34 1035 45 HOH HOH A . E 5 HOH 35 1036 47 HOH HOH A . E 5 HOH 36 1037 48 HOH HOH A . E 5 HOH 37 1038 49 HOH HOH A . E 5 HOH 38 1039 52 HOH HOH A . E 5 HOH 39 1040 53 HOH HOH A . E 5 HOH 40 1041 55 HOH HOH A . E 5 HOH 41 1042 56 HOH HOH A . E 5 HOH 42 1043 57 HOH HOH A . E 5 HOH 43 1044 58 HOH HOH A . E 5 HOH 44 1045 59 HOH HOH A . E 5 HOH 45 1046 60 HOH HOH A . E 5 HOH 46 1047 61 HOH HOH A . E 5 HOH 47 1048 62 HOH HOH A . E 5 HOH 48 1049 64 HOH HOH A . E 5 HOH 49 1050 65 HOH HOH A . E 5 HOH 50 1051 66 HOH HOH A . E 5 HOH 51 1052 69 HOH HOH A . E 5 HOH 52 1053 71 HOH HOH A . E 5 HOH 53 1054 72 HOH HOH A . E 5 HOH 54 1055 73 HOH HOH A . E 5 HOH 55 1056 75 HOH HOH A . E 5 HOH 56 1057 76 HOH HOH A . E 5 HOH 57 1058 77 HOH HOH A . E 5 HOH 58 1059 84 HOH HOH A . E 5 HOH 59 1060 85 HOH HOH A . E 5 HOH 60 1061 86 HOH HOH A . E 5 HOH 61 1062 89 HOH HOH A . E 5 HOH 62 1063 90 HOH HOH A . E 5 HOH 63 1064 91 HOH HOH A . E 5 HOH 64 1065 92 HOH HOH A . E 5 HOH 65 1066 93 HOH HOH A . E 5 HOH 66 1067 95 HOH HOH A . E 5 HOH 67 1068 96 HOH HOH A . F 5 HOH 1 31 31 HOH HOH D . F 5 HOH 2 40 40 HOH HOH D . F 5 HOH 3 94 94 HOH HOH D . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id ALY _pdbx_struct_mod_residue.label_seq_id 11 _pdbx_struct_mod_residue.auth_asym_id D _pdbx_struct_mod_residue.auth_comp_id ALY _pdbx_struct_mod_residue.auth_seq_id 11 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details 'N(6)-ACETYLLYSINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2540 ? 1 MORE -12 ? 1 'SSA (A^2)' 11010 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 124 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 127 ? A CYS 127 ? 1_555 112.4 ? 2 SG ? A CYS 124 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 148 ? A CYS 148 ? 1_555 107.9 ? 3 SG ? A CYS 127 ? A CYS 127 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 148 ? A CYS 148 ? 1_555 106.9 ? 4 SG ? A CYS 124 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 151 ? A CYS 151 ? 1_555 91.9 ? 5 SG ? A CYS 127 ? A CYS 127 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 151 ? A CYS 151 ? 1_555 121.1 ? 6 SG ? A CYS 148 ? A CYS 148 ? 1_555 ZN ? C ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 151 ? A CYS 151 ? 1_555 115.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-05 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 5 'Structure model' 1 4 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.value' 8 4 'Structure model' '_struct_conn.conn_type_id' 9 4 'Structure model' '_struct_conn.id' 10 4 'Structure model' '_struct_conn.pdbx_dist_value' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 26 4 'Structure model' '_struct_conn_type.id' 27 4 'Structure model' '_struct_ref_seq_dif.details' 28 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 31 5 'Structure model' '_chem_comp_atom.atom_id' 32 5 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 Blu-Ice 'data collection' . ? 2 HKL-2000 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C D LYS 10 ? ? N D ALY 11 ? ? 1.515 1.336 0.179 0.023 Y 2 1 C D ALY 11 ? ? N D LEU 12 ? ? 1.606 1.336 0.270 0.023 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 44 ? ? -69.03 69.11 2 1 GLN A 45 ? ? -66.74 -160.92 3 1 ASN A 46 ? ? 3.73 69.89 4 1 VAL A 47 ? ? -48.74 -17.72 5 1 ILE A 68 ? ? -122.11 -53.82 6 1 MET A 71 ? ? -49.45 -19.72 7 1 ARG D 8 ? ? -63.18 43.27 8 1 HIS D 9 ? ? 65.55 62.93 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 SER A 44 ? ? GLN A 45 ? ? -148.26 2 1 GLN A 45 ? ? ASN A 46 ? ? -114.38 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 D _pdbx_validate_polymer_linkage.auth_comp_id_1 ALY _pdbx_validate_polymer_linkage.auth_seq_id_1 11 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 D _pdbx_validate_polymer_linkage.auth_comp_id_2 LEU _pdbx_validate_polymer_linkage.auth_seq_id_2 12 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.61 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 66 ? CG ? A GLU 66 CG 2 1 Y 1 A GLU 66 ? CD ? A GLU 66 CD 3 1 Y 1 A GLU 66 ? OE1 ? A GLU 66 OE1 4 1 Y 1 A GLU 66 ? OE2 ? A GLU 66 OE2 5 1 Y 1 A LYS 111 ? CG ? A LYS 111 CG 6 1 Y 1 A LYS 111 ? CD ? A LYS 111 CD 7 1 Y 1 A LYS 111 ? CE ? A LYS 111 CE 8 1 Y 1 A LYS 111 ? NZ ? A LYS 111 NZ 9 1 Y 1 A LYS 138 ? CG ? A LYS 138 CG 10 1 Y 1 A LYS 138 ? CD ? A LYS 138 CD 11 1 Y 1 A LYS 138 ? CE ? A LYS 138 CE 12 1 Y 1 A LYS 138 ? NZ ? A LYS 138 NZ 13 1 Y 1 A GLN 168 ? CG ? A GLN 168 CG 14 1 Y 1 A GLN 168 ? CD ? A GLN 168 CD 15 1 Y 1 A GLN 168 ? OE1 ? A GLN 168 OE1 16 1 Y 1 A GLN 168 ? NE2 ? A GLN 168 NE2 17 1 Y 1 A ARG 172 ? CG ? A ARG 172 CG 18 1 Y 1 A ARG 172 ? CD ? A ARG 172 CD 19 1 Y 1 A ARG 172 ? NE ? A ARG 172 NE 20 1 Y 1 A ARG 172 ? CZ ? A ARG 172 CZ 21 1 Y 1 A ARG 172 ? NH1 ? A ARG 172 NH1 22 1 Y 1 A ARG 172 ? NH2 ? A ARG 172 NH2 23 1 Y 1 D PHE 14 ? CG ? B PHE 14 CG 24 1 Y 1 D PHE 14 ? CD1 ? B PHE 14 CD1 25 1 Y 1 D PHE 14 ? CD2 ? B PHE 14 CD2 26 1 Y 1 D PHE 14 ? CE1 ? B PHE 14 CE1 27 1 Y 1 D PHE 14 ? CE2 ? B PHE 14 CE2 28 1 Y 1 D PHE 14 ? CZ ? B PHE 14 CZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 37 ? A ASN 37 2 1 Y 1 A GLY 38 ? A GLY 38 3 1 Y 1 A ILE 39 ? A ILE 39 4 1 Y 1 A TYR 40 ? A TYR 40 5 1 Y 1 A LYS 41 ? A LYS 41 6 1 Y 1 A LYS 42 ? A LYS 42 7 1 Y 1 D LYS 1 ? B LYS 1 8 1 Y 1 D LYS 2 ? B LYS 2 9 1 Y 1 D GLY 3 ? B GLY 3 10 1 Y 1 D GLN 4 ? B GLN 4 11 1 Y 1 D SER 5 ? B SER 5 12 1 Y 1 D THR 6 ? B THR 6 13 1 Y 1 D LYS 15 ? B LYS 15 14 1 Y 1 D THR 16 ? B THR 16 15 1 Y 1 D GLU 17 ? B GLU 17 16 1 Y 1 D GLY 18 ? B GLY 18 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ALY OH O N N 14 ALY CH C N N 15 ALY CH3 C N N 16 ALY NZ N N N 17 ALY CE C N N 18 ALY CD C N N 19 ALY CG C N N 20 ALY CB C N N 21 ALY CA C N S 22 ALY N N N N 23 ALY C C N N 24 ALY O O N N 25 ALY OXT O N N 26 ALY HH31 H N N 27 ALY HH32 H N N 28 ALY HH33 H N N 29 ALY HZ H N N 30 ALY HE3 H N N 31 ALY HE2 H N N 32 ALY HD3 H N N 33 ALY HD2 H N N 34 ALY HG3 H N N 35 ALY HG2 H N N 36 ALY HB3 H N N 37 ALY HB2 H N N 38 ALY HA H N N 39 ALY H H N N 40 ALY H2 H N N 41 ALY HXT H N N 42 ARG N N N N 43 ARG CA C N S 44 ARG C C N N 45 ARG O O N N 46 ARG CB C N N 47 ARG CG C N N 48 ARG CD C N N 49 ARG NE N N N 50 ARG CZ C N N 51 ARG NH1 N N N 52 ARG NH2 N N N 53 ARG OXT O N N 54 ARG H H N N 55 ARG H2 H N N 56 ARG HA H N N 57 ARG HB2 H N N 58 ARG HB3 H N N 59 ARG HG2 H N N 60 ARG HG3 H N N 61 ARG HD2 H N N 62 ARG HD3 H N N 63 ARG HE H N N 64 ARG HH11 H N N 65 ARG HH12 H N N 66 ARG HH21 H N N 67 ARG HH22 H N N 68 ARG HXT H N N 69 ASN N N N N 70 ASN CA C N S 71 ASN C C N N 72 ASN O O N N 73 ASN CB C N N 74 ASN CG C N N 75 ASN OD1 O N N 76 ASN ND2 N N N 77 ASN OXT O N N 78 ASN H H N N 79 ASN H2 H N N 80 ASN HA H N N 81 ASN HB2 H N N 82 ASN HB3 H N N 83 ASN HD21 H N N 84 ASN HD22 H N N 85 ASN HXT H N N 86 ASP N N N N 87 ASP CA C N S 88 ASP C C N N 89 ASP O O N N 90 ASP CB C N N 91 ASP CG C N N 92 ASP OD1 O N N 93 ASP OD2 O N N 94 ASP OXT O N N 95 ASP H H N N 96 ASP H2 H N N 97 ASP HA H N N 98 ASP HB2 H N N 99 ASP HB3 H N N 100 ASP HD2 H N N 101 ASP HXT H N N 102 CYS N N N N 103 CYS CA C N R 104 CYS C C N N 105 CYS O O N N 106 CYS CB C N N 107 CYS SG S N N 108 CYS OXT O N N 109 CYS H H N N 110 CYS H2 H N N 111 CYS HA H N N 112 CYS HB2 H N N 113 CYS HB3 H N N 114 CYS HG H N N 115 CYS HXT H N N 116 GLN N N N N 117 GLN CA C N S 118 GLN C C N N 119 GLN O O N N 120 GLN CB C N N 121 GLN CG C N N 122 GLN CD C N N 123 GLN OE1 O N N 124 GLN NE2 N N N 125 GLN OXT O N N 126 GLN H H N N 127 GLN H2 H N N 128 GLN HA H N N 129 GLN HB2 H N N 130 GLN HB3 H N N 131 GLN HG2 H N N 132 GLN HG3 H N N 133 GLN HE21 H N N 134 GLN HE22 H N N 135 GLN HXT H N N 136 GLU N N N N 137 GLU CA C N S 138 GLU C C N N 139 GLU O O N N 140 GLU CB C N N 141 GLU CG C N N 142 GLU CD C N N 143 GLU OE1 O N N 144 GLU OE2 O N N 145 GLU OXT O N N 146 GLU H H N N 147 GLU H2 H N N 148 GLU HA H N N 149 GLU HB2 H N N 150 GLU HB3 H N N 151 GLU HG2 H N N 152 GLU HG3 H N N 153 GLU HE2 H N N 154 GLU HXT H N N 155 GLY N N N N 156 GLY CA C N N 157 GLY C C N N 158 GLY O O N N 159 GLY OXT O N N 160 GLY H H N N 161 GLY H2 H N N 162 GLY HA2 H N N 163 GLY HA3 H N N 164 GLY HXT H N N 165 HIS N N N N 166 HIS CA C N S 167 HIS C C N N 168 HIS O O N N 169 HIS CB C N N 170 HIS CG C Y N 171 HIS ND1 N Y N 172 HIS CD2 C Y N 173 HIS CE1 C Y N 174 HIS NE2 N Y N 175 HIS OXT O N N 176 HIS H H N N 177 HIS H2 H N N 178 HIS HA H N N 179 HIS HB2 H N N 180 HIS HB3 H N N 181 HIS HD1 H N N 182 HIS HD2 H N N 183 HIS HE1 H N N 184 HIS HE2 H N N 185 HIS HXT H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 ILE N N N N 190 ILE CA C N S 191 ILE C C N N 192 ILE O O N N 193 ILE CB C N S 194 ILE CG1 C N N 195 ILE CG2 C N N 196 ILE CD1 C N N 197 ILE OXT O N N 198 ILE H H N N 199 ILE H2 H N N 200 ILE HA H N N 201 ILE HB H N N 202 ILE HG12 H N N 203 ILE HG13 H N N 204 ILE HG21 H N N 205 ILE HG22 H N N 206 ILE HG23 H N N 207 ILE HD11 H N N 208 ILE HD12 H N N 209 ILE HD13 H N N 210 ILE HXT H N N 211 LEU N N N N 212 LEU CA C N S 213 LEU C C N N 214 LEU O O N N 215 LEU CB C N N 216 LEU CG C N N 217 LEU CD1 C N N 218 LEU CD2 C N N 219 LEU OXT O N N 220 LEU H H N N 221 LEU H2 H N N 222 LEU HA H N N 223 LEU HB2 H N N 224 LEU HB3 H N N 225 LEU HG H N N 226 LEU HD11 H N N 227 LEU HD12 H N N 228 LEU HD13 H N N 229 LEU HD21 H N N 230 LEU HD22 H N N 231 LEU HD23 H N N 232 LEU HXT H N N 233 LYS N N N N 234 LYS CA C N S 235 LYS C C N N 236 LYS O O N N 237 LYS CB C N N 238 LYS CG C N N 239 LYS CD C N N 240 LYS CE C N N 241 LYS NZ N N N 242 LYS OXT O N N 243 LYS H H N N 244 LYS H2 H N N 245 LYS HA H N N 246 LYS HB2 H N N 247 LYS HB3 H N N 248 LYS HG2 H N N 249 LYS HG3 H N N 250 LYS HD2 H N N 251 LYS HD3 H N N 252 LYS HE2 H N N 253 LYS HE3 H N N 254 LYS HZ1 H N N 255 LYS HZ2 H N N 256 LYS HZ3 H N N 257 LYS HXT H N N 258 MET N N N N 259 MET CA C N S 260 MET C C N N 261 MET O O N N 262 MET CB C N N 263 MET CG C N N 264 MET SD S N N 265 MET CE C N N 266 MET OXT O N N 267 MET H H N N 268 MET H2 H N N 269 MET HA H N N 270 MET HB2 H N N 271 MET HB3 H N N 272 MET HG2 H N N 273 MET HG3 H N N 274 MET HE1 H N N 275 MET HE2 H N N 276 MET HE3 H N N 277 MET HXT H N N 278 NAD PA P N S 279 NAD O1A O N N 280 NAD O2A O N N 281 NAD O5B O N N 282 NAD C5B C N N 283 NAD C4B C N R 284 NAD O4B O N N 285 NAD C3B C N S 286 NAD O3B O N N 287 NAD C2B C N R 288 NAD O2B O N N 289 NAD C1B C N R 290 NAD N9A N Y N 291 NAD C8A C Y N 292 NAD N7A N Y N 293 NAD C5A C Y N 294 NAD C6A C Y N 295 NAD N6A N N N 296 NAD N1A N Y N 297 NAD C2A C Y N 298 NAD N3A N Y N 299 NAD C4A C Y N 300 NAD O3 O N N 301 NAD PN P N N 302 NAD O1N O N N 303 NAD O2N O N N 304 NAD O5D O N N 305 NAD C5D C N N 306 NAD C4D C N R 307 NAD O4D O N N 308 NAD C3D C N S 309 NAD O3D O N N 310 NAD C2D C N R 311 NAD O2D O N N 312 NAD C1D C N R 313 NAD N1N N Y N 314 NAD C2N C Y N 315 NAD C3N C Y N 316 NAD C7N C N N 317 NAD O7N O N N 318 NAD N7N N N N 319 NAD C4N C Y N 320 NAD C5N C Y N 321 NAD C6N C Y N 322 NAD HOA2 H N N 323 NAD H51A H N N 324 NAD H52A H N N 325 NAD H4B H N N 326 NAD H3B H N N 327 NAD HO3A H N N 328 NAD H2B H N N 329 NAD HO2A H N N 330 NAD H1B H N N 331 NAD H8A H N N 332 NAD H61A H N N 333 NAD H62A H N N 334 NAD H2A H N N 335 NAD H51N H N N 336 NAD H52N H N N 337 NAD H4D H N N 338 NAD H3D H N N 339 NAD HO3N H N N 340 NAD H2D H N N 341 NAD HO2N H N N 342 NAD H1D H N N 343 NAD H2N H N N 344 NAD H71N H N N 345 NAD H72N H N N 346 NAD H4N H N N 347 NAD H5N H N N 348 NAD H6N H N N 349 PHE N N N N 350 PHE CA C N S 351 PHE C C N N 352 PHE O O N N 353 PHE CB C N N 354 PHE CG C Y N 355 PHE CD1 C Y N 356 PHE CD2 C Y N 357 PHE CE1 C Y N 358 PHE CE2 C Y N 359 PHE CZ C Y N 360 PHE OXT O N N 361 PHE H H N N 362 PHE H2 H N N 363 PHE HA H N N 364 PHE HB2 H N N 365 PHE HB3 H N N 366 PHE HD1 H N N 367 PHE HD2 H N N 368 PHE HE1 H N N 369 PHE HE2 H N N 370 PHE HZ H N N 371 PHE HXT H N N 372 PRO N N N N 373 PRO CA C N S 374 PRO C C N N 375 PRO O O N N 376 PRO CB C N N 377 PRO CG C N N 378 PRO CD C N N 379 PRO OXT O N N 380 PRO H H N N 381 PRO HA H N N 382 PRO HB2 H N N 383 PRO HB3 H N N 384 PRO HG2 H N N 385 PRO HG3 H N N 386 PRO HD2 H N N 387 PRO HD3 H N N 388 PRO HXT H N N 389 SER N N N N 390 SER CA C N S 391 SER C C N N 392 SER O O N N 393 SER CB C N N 394 SER OG O N N 395 SER OXT O N N 396 SER H H N N 397 SER H2 H N N 398 SER HA H N N 399 SER HB2 H N N 400 SER HB3 H N N 401 SER HG H N N 402 SER HXT H N N 403 THR N N N N 404 THR CA C N S 405 THR C C N N 406 THR O O N N 407 THR CB C N R 408 THR OG1 O N N 409 THR CG2 C N N 410 THR OXT O N N 411 THR H H N N 412 THR H2 H N N 413 THR HA H N N 414 THR HB H N N 415 THR HG1 H N N 416 THR HG21 H N N 417 THR HG22 H N N 418 THR HG23 H N N 419 THR HXT H N N 420 TYR N N N N 421 TYR CA C N S 422 TYR C C N N 423 TYR O O N N 424 TYR CB C N N 425 TYR CG C Y N 426 TYR CD1 C Y N 427 TYR CD2 C Y N 428 TYR CE1 C Y N 429 TYR CE2 C Y N 430 TYR CZ C Y N 431 TYR OH O N N 432 TYR OXT O N N 433 TYR H H N N 434 TYR H2 H N N 435 TYR HA H N N 436 TYR HB2 H N N 437 TYR HB3 H N N 438 TYR HD1 H N N 439 TYR HD2 H N N 440 TYR HE1 H N N 441 TYR HE2 H N N 442 TYR HH H N N 443 TYR HXT H N N 444 VAL N N N N 445 VAL CA C N S 446 VAL C C N N 447 VAL O O N N 448 VAL CB C N N 449 VAL CG1 C N N 450 VAL CG2 C N N 451 VAL OXT O N N 452 VAL H H N N 453 VAL H2 H N N 454 VAL HA H N N 455 VAL HB H N N 456 VAL HG11 H N N 457 VAL HG12 H N N 458 VAL HG13 H N N 459 VAL HG21 H N N 460 VAL HG22 H N N 461 VAL HG23 H N N 462 VAL HXT H N N 463 ZN ZN ZN N N 464 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ALY OH CH doub N N 13 ALY CH CH3 sing N N 14 ALY CH NZ sing N N 15 ALY CH3 HH31 sing N N 16 ALY CH3 HH32 sing N N 17 ALY CH3 HH33 sing N N 18 ALY NZ CE sing N N 19 ALY NZ HZ sing N N 20 ALY CE CD sing N N 21 ALY CE HE3 sing N N 22 ALY CE HE2 sing N N 23 ALY CD CG sing N N 24 ALY CD HD3 sing N N 25 ALY CD HD2 sing N N 26 ALY CG CB sing N N 27 ALY CG HG3 sing N N 28 ALY CG HG2 sing N N 29 ALY CB CA sing N N 30 ALY CB HB3 sing N N 31 ALY CB HB2 sing N N 32 ALY CA N sing N N 33 ALY CA C sing N N 34 ALY CA HA sing N N 35 ALY N H sing N N 36 ALY N H2 sing N N 37 ALY C O doub N N 38 ALY C OXT sing N N 39 ALY OXT HXT sing N N 40 ARG N CA sing N N 41 ARG N H sing N N 42 ARG N H2 sing N N 43 ARG CA C sing N N 44 ARG CA CB sing N N 45 ARG CA HA sing N N 46 ARG C O doub N N 47 ARG C OXT sing N N 48 ARG CB CG sing N N 49 ARG CB HB2 sing N N 50 ARG CB HB3 sing N N 51 ARG CG CD sing N N 52 ARG CG HG2 sing N N 53 ARG CG HG3 sing N N 54 ARG CD NE sing N N 55 ARG CD HD2 sing N N 56 ARG CD HD3 sing N N 57 ARG NE CZ sing N N 58 ARG NE HE sing N N 59 ARG CZ NH1 sing N N 60 ARG CZ NH2 doub N N 61 ARG NH1 HH11 sing N N 62 ARG NH1 HH12 sing N N 63 ARG NH2 HH21 sing N N 64 ARG NH2 HH22 sing N N 65 ARG OXT HXT sing N N 66 ASN N CA sing N N 67 ASN N H sing N N 68 ASN N H2 sing N N 69 ASN CA C sing N N 70 ASN CA CB sing N N 71 ASN CA HA sing N N 72 ASN C O doub N N 73 ASN C OXT sing N N 74 ASN CB CG sing N N 75 ASN CB HB2 sing N N 76 ASN CB HB3 sing N N 77 ASN CG OD1 doub N N 78 ASN CG ND2 sing N N 79 ASN ND2 HD21 sing N N 80 ASN ND2 HD22 sing N N 81 ASN OXT HXT sing N N 82 ASP N CA sing N N 83 ASP N H sing N N 84 ASP N H2 sing N N 85 ASP CA C sing N N 86 ASP CA CB sing N N 87 ASP CA HA sing N N 88 ASP C O doub N N 89 ASP C OXT sing N N 90 ASP CB CG sing N N 91 ASP CB HB2 sing N N 92 ASP CB HB3 sing N N 93 ASP CG OD1 doub N N 94 ASP CG OD2 sing N N 95 ASP OD2 HD2 sing N N 96 ASP OXT HXT sing N N 97 CYS N CA sing N N 98 CYS N H sing N N 99 CYS N H2 sing N N 100 CYS CA C sing N N 101 CYS CA CB sing N N 102 CYS CA HA sing N N 103 CYS C O doub N N 104 CYS C OXT sing N N 105 CYS CB SG sing N N 106 CYS CB HB2 sing N N 107 CYS CB HB3 sing N N 108 CYS SG HG sing N N 109 CYS OXT HXT sing N N 110 GLN N CA sing N N 111 GLN N H sing N N 112 GLN N H2 sing N N 113 GLN CA C sing N N 114 GLN CA CB sing N N 115 GLN CA HA sing N N 116 GLN C O doub N N 117 GLN C OXT sing N N 118 GLN CB CG sing N N 119 GLN CB HB2 sing N N 120 GLN CB HB3 sing N N 121 GLN CG CD sing N N 122 GLN CG HG2 sing N N 123 GLN CG HG3 sing N N 124 GLN CD OE1 doub N N 125 GLN CD NE2 sing N N 126 GLN NE2 HE21 sing N N 127 GLN NE2 HE22 sing N N 128 GLN OXT HXT sing N N 129 GLU N CA sing N N 130 GLU N H sing N N 131 GLU N H2 sing N N 132 GLU CA C sing N N 133 GLU CA CB sing N N 134 GLU CA HA sing N N 135 GLU C O doub N N 136 GLU C OXT sing N N 137 GLU CB CG sing N N 138 GLU CB HB2 sing N N 139 GLU CB HB3 sing N N 140 GLU CG CD sing N N 141 GLU CG HG2 sing N N 142 GLU CG HG3 sing N N 143 GLU CD OE1 doub N N 144 GLU CD OE2 sing N N 145 GLU OE2 HE2 sing N N 146 GLU OXT HXT sing N N 147 GLY N CA sing N N 148 GLY N H sing N N 149 GLY N H2 sing N N 150 GLY CA C sing N N 151 GLY CA HA2 sing N N 152 GLY CA HA3 sing N N 153 GLY C O doub N N 154 GLY C OXT sing N N 155 GLY OXT HXT sing N N 156 HIS N CA sing N N 157 HIS N H sing N N 158 HIS N H2 sing N N 159 HIS CA C sing N N 160 HIS CA CB sing N N 161 HIS CA HA sing N N 162 HIS C O doub N N 163 HIS C OXT sing N N 164 HIS CB CG sing N N 165 HIS CB HB2 sing N N 166 HIS CB HB3 sing N N 167 HIS CG ND1 sing Y N 168 HIS CG CD2 doub Y N 169 HIS ND1 CE1 doub Y N 170 HIS ND1 HD1 sing N N 171 HIS CD2 NE2 sing Y N 172 HIS CD2 HD2 sing N N 173 HIS CE1 NE2 sing Y N 174 HIS CE1 HE1 sing N N 175 HIS NE2 HE2 sing N N 176 HIS OXT HXT sing N N 177 HOH O H1 sing N N 178 HOH O H2 sing N N 179 ILE N CA sing N N 180 ILE N H sing N N 181 ILE N H2 sing N N 182 ILE CA C sing N N 183 ILE CA CB sing N N 184 ILE CA HA sing N N 185 ILE C O doub N N 186 ILE C OXT sing N N 187 ILE CB CG1 sing N N 188 ILE CB CG2 sing N N 189 ILE CB HB sing N N 190 ILE CG1 CD1 sing N N 191 ILE CG1 HG12 sing N N 192 ILE CG1 HG13 sing N N 193 ILE CG2 HG21 sing N N 194 ILE CG2 HG22 sing N N 195 ILE CG2 HG23 sing N N 196 ILE CD1 HD11 sing N N 197 ILE CD1 HD12 sing N N 198 ILE CD1 HD13 sing N N 199 ILE OXT HXT sing N N 200 LEU N CA sing N N 201 LEU N H sing N N 202 LEU N H2 sing N N 203 LEU CA C sing N N 204 LEU CA CB sing N N 205 LEU CA HA sing N N 206 LEU C O doub N N 207 LEU C OXT sing N N 208 LEU CB CG sing N N 209 LEU CB HB2 sing N N 210 LEU CB HB3 sing N N 211 LEU CG CD1 sing N N 212 LEU CG CD2 sing N N 213 LEU CG HG sing N N 214 LEU CD1 HD11 sing N N 215 LEU CD1 HD12 sing N N 216 LEU CD1 HD13 sing N N 217 LEU CD2 HD21 sing N N 218 LEU CD2 HD22 sing N N 219 LEU CD2 HD23 sing N N 220 LEU OXT HXT sing N N 221 LYS N CA sing N N 222 LYS N H sing N N 223 LYS N H2 sing N N 224 LYS CA C sing N N 225 LYS CA CB sing N N 226 LYS CA HA sing N N 227 LYS C O doub N N 228 LYS C OXT sing N N 229 LYS CB CG sing N N 230 LYS CB HB2 sing N N 231 LYS CB HB3 sing N N 232 LYS CG CD sing N N 233 LYS CG HG2 sing N N 234 LYS CG HG3 sing N N 235 LYS CD CE sing N N 236 LYS CD HD2 sing N N 237 LYS CD HD3 sing N N 238 LYS CE NZ sing N N 239 LYS CE HE2 sing N N 240 LYS CE HE3 sing N N 241 LYS NZ HZ1 sing N N 242 LYS NZ HZ2 sing N N 243 LYS NZ HZ3 sing N N 244 LYS OXT HXT sing N N 245 MET N CA sing N N 246 MET N H sing N N 247 MET N H2 sing N N 248 MET CA C sing N N 249 MET CA CB sing N N 250 MET CA HA sing N N 251 MET C O doub N N 252 MET C OXT sing N N 253 MET CB CG sing N N 254 MET CB HB2 sing N N 255 MET CB HB3 sing N N 256 MET CG SD sing N N 257 MET CG HG2 sing N N 258 MET CG HG3 sing N N 259 MET SD CE sing N N 260 MET CE HE1 sing N N 261 MET CE HE2 sing N N 262 MET CE HE3 sing N N 263 MET OXT HXT sing N N 264 NAD PA O1A doub N N 265 NAD PA O2A sing N N 266 NAD PA O5B sing N N 267 NAD PA O3 sing N N 268 NAD O2A HOA2 sing N N 269 NAD O5B C5B sing N N 270 NAD C5B C4B sing N N 271 NAD C5B H51A sing N N 272 NAD C5B H52A sing N N 273 NAD C4B O4B sing N N 274 NAD C4B C3B sing N N 275 NAD C4B H4B sing N N 276 NAD O4B C1B sing N N 277 NAD C3B O3B sing N N 278 NAD C3B C2B sing N N 279 NAD C3B H3B sing N N 280 NAD O3B HO3A sing N N 281 NAD C2B O2B sing N N 282 NAD C2B C1B sing N N 283 NAD C2B H2B sing N N 284 NAD O2B HO2A sing N N 285 NAD C1B N9A sing N N 286 NAD C1B H1B sing N N 287 NAD N9A C8A sing Y N 288 NAD N9A C4A sing Y N 289 NAD C8A N7A doub Y N 290 NAD C8A H8A sing N N 291 NAD N7A C5A sing Y N 292 NAD C5A C6A sing Y N 293 NAD C5A C4A doub Y N 294 NAD C6A N6A sing N N 295 NAD C6A N1A doub Y N 296 NAD N6A H61A sing N N 297 NAD N6A H62A sing N N 298 NAD N1A C2A sing Y N 299 NAD C2A N3A doub Y N 300 NAD C2A H2A sing N N 301 NAD N3A C4A sing Y N 302 NAD O3 PN sing N N 303 NAD PN O1N doub N N 304 NAD PN O2N sing N N 305 NAD PN O5D sing N N 306 NAD O5D C5D sing N N 307 NAD C5D C4D sing N N 308 NAD C5D H51N sing N N 309 NAD C5D H52N sing N N 310 NAD C4D O4D sing N N 311 NAD C4D C3D sing N N 312 NAD C4D H4D sing N N 313 NAD O4D C1D sing N N 314 NAD C3D O3D sing N N 315 NAD C3D C2D sing N N 316 NAD C3D H3D sing N N 317 NAD O3D HO3N sing N N 318 NAD C2D O2D sing N N 319 NAD C2D C1D sing N N 320 NAD C2D H2D sing N N 321 NAD O2D HO2N sing N N 322 NAD C1D N1N sing N N 323 NAD C1D H1D sing N N 324 NAD N1N C2N sing Y N 325 NAD N1N C6N doub Y N 326 NAD C2N C3N doub Y N 327 NAD C2N H2N sing N N 328 NAD C3N C7N sing N N 329 NAD C3N C4N sing Y N 330 NAD C7N O7N doub N N 331 NAD C7N N7N sing N N 332 NAD N7N H71N sing N N 333 NAD N7N H72N sing N N 334 NAD C4N C5N doub Y N 335 NAD C4N H4N sing N N 336 NAD C5N C6N sing Y N 337 NAD C5N H5N sing N N 338 NAD C6N H6N sing N N 339 PHE N CA sing N N 340 PHE N H sing N N 341 PHE N H2 sing N N 342 PHE CA C sing N N 343 PHE CA CB sing N N 344 PHE CA HA sing N N 345 PHE C O doub N N 346 PHE C OXT sing N N 347 PHE CB CG sing N N 348 PHE CB HB2 sing N N 349 PHE CB HB3 sing N N 350 PHE CG CD1 doub Y N 351 PHE CG CD2 sing Y N 352 PHE CD1 CE1 sing Y N 353 PHE CD1 HD1 sing N N 354 PHE CD2 CE2 doub Y N 355 PHE CD2 HD2 sing N N 356 PHE CE1 CZ doub Y N 357 PHE CE1 HE1 sing N N 358 PHE CE2 CZ sing Y N 359 PHE CE2 HE2 sing N N 360 PHE CZ HZ sing N N 361 PHE OXT HXT sing N N 362 PRO N CA sing N N 363 PRO N CD sing N N 364 PRO N H sing N N 365 PRO CA C sing N N 366 PRO CA CB sing N N 367 PRO CA HA sing N N 368 PRO C O doub N N 369 PRO C OXT sing N N 370 PRO CB CG sing N N 371 PRO CB HB2 sing N N 372 PRO CB HB3 sing N N 373 PRO CG CD sing N N 374 PRO CG HG2 sing N N 375 PRO CG HG3 sing N N 376 PRO CD HD2 sing N N 377 PRO CD HD3 sing N N 378 PRO OXT HXT sing N N 379 SER N CA sing N N 380 SER N H sing N N 381 SER N H2 sing N N 382 SER CA C sing N N 383 SER CA CB sing N N 384 SER CA HA sing N N 385 SER C O doub N N 386 SER C OXT sing N N 387 SER CB OG sing N N 388 SER CB HB2 sing N N 389 SER CB HB3 sing N N 390 SER OG HG sing N N 391 SER OXT HXT sing N N 392 THR N CA sing N N 393 THR N H sing N N 394 THR N H2 sing N N 395 THR CA C sing N N 396 THR CA CB sing N N 397 THR CA HA sing N N 398 THR C O doub N N 399 THR C OXT sing N N 400 THR CB OG1 sing N N 401 THR CB CG2 sing N N 402 THR CB HB sing N N 403 THR OG1 HG1 sing N N 404 THR CG2 HG21 sing N N 405 THR CG2 HG22 sing N N 406 THR CG2 HG23 sing N N 407 THR OXT HXT sing N N 408 TYR N CA sing N N 409 TYR N H sing N N 410 TYR N H2 sing N N 411 TYR CA C sing N N 412 TYR CA CB sing N N 413 TYR CA HA sing N N 414 TYR C O doub N N 415 TYR C OXT sing N N 416 TYR CB CG sing N N 417 TYR CB HB2 sing N N 418 TYR CB HB3 sing N N 419 TYR CG CD1 doub Y N 420 TYR CG CD2 sing Y N 421 TYR CD1 CE1 sing Y N 422 TYR CD1 HD1 sing N N 423 TYR CD2 CE2 doub Y N 424 TYR CD2 HD2 sing N N 425 TYR CE1 CZ doub Y N 426 TYR CE1 HE1 sing N N 427 TYR CE2 CZ sing Y N 428 TYR CE2 HE2 sing N N 429 TYR CZ OH sing N N 430 TYR OH HH sing N N 431 TYR OXT HXT sing N N 432 VAL N CA sing N N 433 VAL N H sing N N 434 VAL N H2 sing N N 435 VAL CA C sing N N 436 VAL CA CB sing N N 437 VAL CA HA sing N N 438 VAL C O doub N N 439 VAL C OXT sing N N 440 VAL CB CG1 sing N N 441 VAL CB CG2 sing N N 442 VAL CB HB sing N N 443 VAL CG1 HG11 sing N N 444 VAL CG1 HG12 sing N N 445 VAL CG1 HG13 sing N N 446 VAL CG2 HG21 sing N N 447 VAL CG2 HG22 sing N N 448 VAL CG2 HG23 sing N N 449 VAL OXT HXT sing N N 450 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YC5 _pdbx_initial_refinement_model.details 'PDB Entry: 1yc5' #