data_2HAG # _entry.id 2HAG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HAG pdb_00002hag 10.2210/pdb2hag/pdb RCSB RCSB038131 ? ? WWPDB D_1000038131 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 360890 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2HAG _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-06-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif.' _citation.journal_abbrev Proteins _citation.journal_volume 69 _citation.page_first 223 _citation.page_last 233 _citation.year 2007 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17654545 _citation.pdbx_database_id_DOI 10.1002/prot.21550 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zubieta, C.' 1 ? primary 'Krishna, S.S.' 2 ? primary 'Kapoor, M.' 3 ? primary 'Kozbial, P.' 4 ? primary 'McMullan, D.' 5 ? primary 'Axelrod, H.L.' 6 ? primary 'Miller, M.D.' 7 ? primary 'Abdubek, P.' 8 ? primary 'Ambing, E.' 9 ? primary 'Astakhova, T.' 10 ? primary 'Carlton, D.' 11 ? primary 'Chiu, H.J.' 12 ? primary 'Clayton, T.' 13 ? primary 'Deller, M.C.' 14 ? primary 'Duan, L.' 15 ? primary 'Elsliger, M.A.' 16 ? primary 'Feuerhelm, J.' 17 ? primary 'Grzechnik, S.K.' 18 ? primary 'Hale, J.' 19 ? primary 'Hampton, E.' 20 ? primary 'Han, G.W.' 21 ? primary 'Jaroszewski, L.' 22 ? primary 'Jin, K.K.' 23 ? primary 'Klock, H.E.' 24 ? primary 'Knuth, M.W.' 25 ? primary 'Kumar, A.' 26 ? primary 'Marciano, D.' 27 ? primary 'Morse, A.T.' 28 ? primary 'Nigoghossian, E.' 29 ? primary 'Okach, L.' 30 ? primary 'Oommachen, S.' 31 ? primary 'Reyes, R.' 32 ? primary 'Rife, C.L.' 33 ? primary 'Schimmel, P.' 34 ? primary 'van den Bedem, H.' 35 ? primary 'Weekes, D.' 36 ? primary 'White, A.' 37 ? primary 'Xu, Q.' 38 ? primary 'Hodgson, K.O.' 39 ? primary 'Wooley, J.' 40 ? primary 'Deacon, A.M.' 41 ? primary 'Godzik, A.' 42 ? primary 'Lesley, S.A.' 43 ? primary 'Wilson, I.A.' 44 ? # _cell.entry_id 2HAG _cell.length_a 94.310 _cell.length_b 94.310 _cell.length_c 113.680 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HAG _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Melanin biosynthesis protein TyrA, putative' 36469.797 1 ? ? ? ? 2 water nat water 18.015 48 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)DIQN(MSE)PREQLGVCAEGNLHSVYL(MSE)FNANDNVESQLRPCIANVAQYIYELTDQYSDSAFNGFVAIGA NYWDSLYPESRPE(MSE)LKPFPA(MSE)QEGNREAPAIEYDLFVHLRCDRYDILHLVANEISQ(MSE)FEDLVELVEEE RGFRF(MSE)DSRDLTGFVDGTENPKGRHRQEVALVGSEDPEFKGGSYIHVQKYAHNLSKWHRLPLKKQEDIIGRTKQDN IEYESEDKPLTSHIKRVNLKDENGKSIEILRQS(MSE)PYGSLKEQGL(MSE)FISTCRTPDHFEK(MSE)LHS(MSE)V FGDGAGNHDHL(MSE)HFTSALTGSSFFAPSLDFL(MSE)QFDN ; _entity_poly.pdbx_seq_one_letter_code_can ;GMDIQNMPREQLGVCAEGNLHSVYLMFNANDNVESQLRPCIANVAQYIYELTDQYSDSAFNGFVAIGANYWDSLYPESRP EMLKPFPAMQEGNREAPAIEYDLFVHLRCDRYDILHLVANEISQMFEDLVELVEEERGFRFMDSRDLTGFVDGTENPKGR HRQEVALVGSEDPEFKGGSYIHVQKYAHNLSKWHRLPLKKQEDIIGRTKQDNIEYESEDKPLTSHIKRVNLKDENGKSIE ILRQSMPYGSLKEQGLMFISTCRTPDHFEKMLHSMVFGDGAGNHDHLMHFTSALTGSSFFAPSLDFLMQFDN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 360890 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ASP n 1 4 ILE n 1 5 GLN n 1 6 ASN n 1 7 MSE n 1 8 PRO n 1 9 ARG n 1 10 GLU n 1 11 GLN n 1 12 LEU n 1 13 GLY n 1 14 VAL n 1 15 CYS n 1 16 ALA n 1 17 GLU n 1 18 GLY n 1 19 ASN n 1 20 LEU n 1 21 HIS n 1 22 SER n 1 23 VAL n 1 24 TYR n 1 25 LEU n 1 26 MSE n 1 27 PHE n 1 28 ASN n 1 29 ALA n 1 30 ASN n 1 31 ASP n 1 32 ASN n 1 33 VAL n 1 34 GLU n 1 35 SER n 1 36 GLN n 1 37 LEU n 1 38 ARG n 1 39 PRO n 1 40 CYS n 1 41 ILE n 1 42 ALA n 1 43 ASN n 1 44 VAL n 1 45 ALA n 1 46 GLN n 1 47 TYR n 1 48 ILE n 1 49 TYR n 1 50 GLU n 1 51 LEU n 1 52 THR n 1 53 ASP n 1 54 GLN n 1 55 TYR n 1 56 SER n 1 57 ASP n 1 58 SER n 1 59 ALA n 1 60 PHE n 1 61 ASN n 1 62 GLY n 1 63 PHE n 1 64 VAL n 1 65 ALA n 1 66 ILE n 1 67 GLY n 1 68 ALA n 1 69 ASN n 1 70 TYR n 1 71 TRP n 1 72 ASP n 1 73 SER n 1 74 LEU n 1 75 TYR n 1 76 PRO n 1 77 GLU n 1 78 SER n 1 79 ARG n 1 80 PRO n 1 81 GLU n 1 82 MSE n 1 83 LEU n 1 84 LYS n 1 85 PRO n 1 86 PHE n 1 87 PRO n 1 88 ALA n 1 89 MSE n 1 90 GLN n 1 91 GLU n 1 92 GLY n 1 93 ASN n 1 94 ARG n 1 95 GLU n 1 96 ALA n 1 97 PRO n 1 98 ALA n 1 99 ILE n 1 100 GLU n 1 101 TYR n 1 102 ASP n 1 103 LEU n 1 104 PHE n 1 105 VAL n 1 106 HIS n 1 107 LEU n 1 108 ARG n 1 109 CYS n 1 110 ASP n 1 111 ARG n 1 112 TYR n 1 113 ASP n 1 114 ILE n 1 115 LEU n 1 116 HIS n 1 117 LEU n 1 118 VAL n 1 119 ALA n 1 120 ASN n 1 121 GLU n 1 122 ILE n 1 123 SER n 1 124 GLN n 1 125 MSE n 1 126 PHE n 1 127 GLU n 1 128 ASP n 1 129 LEU n 1 130 VAL n 1 131 GLU n 1 132 LEU n 1 133 VAL n 1 134 GLU n 1 135 GLU n 1 136 GLU n 1 137 ARG n 1 138 GLY n 1 139 PHE n 1 140 ARG n 1 141 PHE n 1 142 MSE n 1 143 ASP n 1 144 SER n 1 145 ARG n 1 146 ASP n 1 147 LEU n 1 148 THR n 1 149 GLY n 1 150 PHE n 1 151 VAL n 1 152 ASP n 1 153 GLY n 1 154 THR n 1 155 GLU n 1 156 ASN n 1 157 PRO n 1 158 LYS n 1 159 GLY n 1 160 ARG n 1 161 HIS n 1 162 ARG n 1 163 GLN n 1 164 GLU n 1 165 VAL n 1 166 ALA n 1 167 LEU n 1 168 VAL n 1 169 GLY n 1 170 SER n 1 171 GLU n 1 172 ASP n 1 173 PRO n 1 174 GLU n 1 175 PHE n 1 176 LYS n 1 177 GLY n 1 178 GLY n 1 179 SER n 1 180 TYR n 1 181 ILE n 1 182 HIS n 1 183 VAL n 1 184 GLN n 1 185 LYS n 1 186 TYR n 1 187 ALA n 1 188 HIS n 1 189 ASN n 1 190 LEU n 1 191 SER n 1 192 LYS n 1 193 TRP n 1 194 HIS n 1 195 ARG n 1 196 LEU n 1 197 PRO n 1 198 LEU n 1 199 LYS n 1 200 LYS n 1 201 GLN n 1 202 GLU n 1 203 ASP n 1 204 ILE n 1 205 ILE n 1 206 GLY n 1 207 ARG n 1 208 THR n 1 209 LYS n 1 210 GLN n 1 211 ASP n 1 212 ASN n 1 213 ILE n 1 214 GLU n 1 215 TYR n 1 216 GLU n 1 217 SER n 1 218 GLU n 1 219 ASP n 1 220 LYS n 1 221 PRO n 1 222 LEU n 1 223 THR n 1 224 SER n 1 225 HIS n 1 226 ILE n 1 227 LYS n 1 228 ARG n 1 229 VAL n 1 230 ASN n 1 231 LEU n 1 232 LYS n 1 233 ASP n 1 234 GLU n 1 235 ASN n 1 236 GLY n 1 237 LYS n 1 238 SER n 1 239 ILE n 1 240 GLU n 1 241 ILE n 1 242 LEU n 1 243 ARG n 1 244 GLN n 1 245 SER n 1 246 MSE n 1 247 PRO n 1 248 TYR n 1 249 GLY n 1 250 SER n 1 251 LEU n 1 252 LYS n 1 253 GLU n 1 254 GLN n 1 255 GLY n 1 256 LEU n 1 257 MSE n 1 258 PHE n 1 259 ILE n 1 260 SER n 1 261 THR n 1 262 CYS n 1 263 ARG n 1 264 THR n 1 265 PRO n 1 266 ASP n 1 267 HIS n 1 268 PHE n 1 269 GLU n 1 270 LYS n 1 271 MSE n 1 272 LEU n 1 273 HIS n 1 274 SER n 1 275 MSE n 1 276 VAL n 1 277 PHE n 1 278 GLY n 1 279 ASP n 1 280 GLY n 1 281 ALA n 1 282 GLY n 1 283 ASN n 1 284 HIS n 1 285 ASP n 1 286 HIS n 1 287 LEU n 1 288 MSE n 1 289 HIS n 1 290 PHE n 1 291 THR n 1 292 SER n 1 293 ALA n 1 294 LEU n 1 295 THR n 1 296 GLY n 1 297 SER n 1 298 SER n 1 299 PHE n 1 300 PHE n 1 301 ALA n 1 302 PRO n 1 303 SER n 1 304 LEU n 1 305 ASP n 1 306 PHE n 1 307 LEU n 1 308 MSE n 1 309 GLN n 1 310 PHE n 1 311 ASP n 1 312 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Shewanella _entity_src_gen.pdbx_gene_src_gene np_716371.1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella oneidensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 70863 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8EIU4_SHEON _struct_ref.pdbx_db_accession Q8EIU4 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HAG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 312 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8EIU4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 311 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 311 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HAG GLY A 1 ? UNP Q8EIU4 ? ? 'expression tag' 0 1 1 2HAG MSE A 2 ? UNP Q8EIU4 MET 1 'modified residue' 1 2 1 2HAG MSE A 7 ? UNP Q8EIU4 MET 6 'modified residue' 6 3 1 2HAG MSE A 26 ? UNP Q8EIU4 MET 25 'modified residue' 25 4 1 2HAG MSE A 82 ? UNP Q8EIU4 MET 81 'modified residue' 81 5 1 2HAG MSE A 89 ? UNP Q8EIU4 MET 88 'modified residue' 88 6 1 2HAG MSE A 125 ? UNP Q8EIU4 MET 124 'modified residue' 124 7 1 2HAG MSE A 142 ? UNP Q8EIU4 MET 141 'modified residue' 141 8 1 2HAG MSE A 246 ? UNP Q8EIU4 MET 245 'modified residue' 245 9 1 2HAG MSE A 257 ? UNP Q8EIU4 MET 256 'modified residue' 256 10 1 2HAG MSE A 271 ? UNP Q8EIU4 MET 270 'modified residue' 270 11 1 2HAG MSE A 275 ? UNP Q8EIU4 MET 274 'modified residue' 274 12 1 2HAG MSE A 288 ? UNP Q8EIU4 MET 287 'modified residue' 287 13 1 2HAG MSE A 308 ? UNP Q8EIU4 MET 307 'modified residue' 307 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2HAG # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 65.66 _exptl_crystal.density_Matthews 3.61 _exptl_crystal.description ;AFTER THE INITIAL TRACE, A MODEL OF A HOMOLOGOUS PROTEIN (PDB ENTRY 2GVK) WAS USED TO FACILITATE COMPLETION OF THE MODEL. ; _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '5.0% iso-Propanol, 20.0% PEG-4000, 0.1M HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2006-04-24 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979291 1.0 2 0.918370 1.0 3 0.978940 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.979291, 0.918370, 0.978940' _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2HAG _reflns.d_resolution_high 2.750 _reflns.d_resolution_low 29.54 _reflns.number_obs 13932 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_netI_over_sigmaI 10.850 _reflns.percent_possible_obs 95.400 _reflns.B_iso_Wilson_estimate 58.902 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.75 2.85 8805 ? ? 0.835 1.7 ? ? ? ? 2297 86.70 1 1 2.85 2.96 8529 ? ? 0.671 2.2 ? ? ? ? 2214 89.80 2 1 2.96 3.10 9500 ? ? 0.543 2.7 ? ? ? ? 2459 92.10 3 1 3.10 3.26 9309 ? ? 0.4 3.6 ? ? ? ? 2415 94.50 4 1 3.26 3.46 9345 ? ? 0.266 5.3 ? ? ? ? 2423 96.80 5 1 3.46 3.73 9908 ? ? 0.152 8.5 ? ? ? ? 2573 98.40 6 1 3.73 4.10 9809 ? ? 0.083 13.9 ? ? ? ? 2542 99.30 7 1 4.10 4.69 9839 ? ? 0.056 18.6 ? ? ? ? 2559 99.30 8 1 4.69 ? 9792 ? ? 0.057 19.1 ? ? ? ? 2569 99.60 9 1 # _refine.entry_id 2HAG _refine.ls_d_res_high 2.750 _refine.ls_d_res_low 29.54 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.720 _refine.ls_number_reflns_obs 13888 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.7 TO ACCOUNT FOR THE REDUCED SCATTERING DUE TO PARTIAL S-MET INCORPORATION. 3. ADDITIONAL ELECTRON DENSITY WAS NOTED ADJACENT TO RESIDUE A20 BUT NOT MODELLED. 4. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.229 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 691 _refine.B_iso_mean 58.485 _refine.aniso_B[1][1] -2.000 _refine.aniso_B[2][2] -2.000 _refine.aniso_B[3][3] 3.990 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.pdbx_overall_ESU_R 0.474 _refine.pdbx_overall_ESU_R_Free 0.279 _refine.overall_SU_ML 0.213 _refine.overall_SU_B 22.648 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.193 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2453 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 2501 _refine_hist.d_res_high 2.750 _refine_hist.d_res_low 29.54 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2513 0.010 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 2179 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3394 1.134 1.947 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 5081 0.615 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 306 6.927 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 133 35.040 24.361 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 424 15.824 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15 12.404 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 352 0.063 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2843 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 526 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 600 0.228 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 2312 0.212 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1241 0.198 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1414 0.093 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 130 0.146 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 9 0.146 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 32 0.215 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 8 0.203 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1578 2.670 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 622 0.532 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2452 3.803 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1064 2.574 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 942 3.761 5.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.749 _refine_ls_shell.d_res_low 2.820 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.110 _refine_ls_shell.number_reflns_R_work 953 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.34 _refine_ls_shell.R_factor_R_free 0.375 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 54 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1007 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HAG _struct.title 'Crystal structure of a putative dyp-type peroxidase protein (so_0740) from shewanella oneidensis at 2.75 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Ferredoxin-like fold, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, hydrolase ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 2HAG # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 33 ? TYR A 55 ? VAL A 32 TYR A 54 1 ? 23 HELX_P HELX_P2 2 SER A 56 ? ALA A 59 ? SER A 55 ALA A 58 5 ? 4 HELX_P HELX_P3 3 TYR A 70 ? TYR A 75 ? TYR A 69 TYR A 74 1 ? 6 HELX_P HELX_P4 4 ARG A 111 ? GLU A 127 ? ARG A 110 GLU A 126 1 ? 17 HELX_P HELX_P5 5 ARG A 160 ? LEU A 167 ? ARG A 159 LEU A 166 1 ? 8 HELX_P HELX_P6 6 ASP A 172 ? LYS A 176 ? ASP A 171 LYS A 175 5 ? 5 HELX_P HELX_P7 7 ASN A 189 ? HIS A 194 ? ASN A 188 HIS A 193 1 ? 6 HELX_P HELX_P8 8 PRO A 197 ? GLY A 206 ? PRO A 196 GLY A 205 1 ? 10 HELX_P HELX_P9 9 SER A 224 ? ASN A 230 ? SER A 223 ASN A 229 1 ? 7 HELX_P HELX_P10 10 PRO A 265 ? PHE A 277 ? PRO A 264 PHE A 276 1 ? 13 HELX_P HELX_P11 11 ASP A 285 ? HIS A 289 ? ASP A 284 HIS A 288 5 ? 5 HELX_P HELX_P12 12 SER A 303 ? GLN A 309 ? SER A 302 GLN A 308 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 6 C ? ? ? 1_555 A MSE 7 N ? ? A ASN 5 A MSE 6 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A MSE 7 C ? ? ? 1_555 A PRO 8 N ? ? A MSE 6 A PRO 7 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale3 covale both ? A LEU 25 C ? ? ? 1_555 A MSE 26 N ? ? A LEU 24 A MSE 25 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale4 covale both ? A MSE 26 C ? ? ? 1_555 A PHE 27 N ? ? A MSE 25 A PHE 26 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale5 covale both ? A GLU 81 C ? ? ? 1_555 A MSE 82 N ? ? A GLU 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale6 covale both ? A MSE 82 C ? ? ? 1_555 A LEU 83 N ? ? A MSE 81 A LEU 82 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? A ALA 88 C ? ? ? 1_555 A MSE 89 N ? ? A ALA 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale8 covale both ? A MSE 89 C ? ? ? 1_555 A GLN 90 N ? ? A MSE 88 A GLN 89 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? A GLN 124 C ? ? ? 1_555 A MSE 125 N ? ? A GLN 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A MSE 125 C ? ? ? 1_555 A PHE 126 N ? ? A MSE 124 A PHE 125 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale11 covale both ? A PHE 141 C ? ? ? 1_555 A MSE 142 N ? ? A PHE 140 A MSE 141 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale12 covale both ? A MSE 142 C ? ? ? 1_555 A ASP 143 N ? ? A MSE 141 A ASP 142 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? A SER 245 C ? ? ? 1_555 A MSE 246 N ? ? A SER 244 A MSE 245 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale both ? A MSE 246 C ? ? ? 1_555 A PRO 247 N ? ? A MSE 245 A PRO 246 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale15 covale both ? A LEU 256 C ? ? ? 1_555 A MSE 257 N ? ? A LEU 255 A MSE 256 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale16 covale both ? A MSE 257 C ? ? ? 1_555 A PHE 258 N ? ? A MSE 256 A PHE 257 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale17 covale both ? A LYS 270 C ? ? ? 1_555 A MSE 271 N ? ? A LYS 269 A MSE 270 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale18 covale both ? A MSE 271 C ? ? ? 1_555 A LEU 272 N ? ? A MSE 270 A LEU 271 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale19 covale both ? A SER 274 C ? ? ? 1_555 A MSE 275 N ? ? A SER 273 A MSE 274 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale20 covale both ? A MSE 275 C ? ? ? 1_555 A VAL 276 N ? ? A MSE 274 A VAL 275 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale21 covale both ? A LEU 287 C ? ? ? 1_555 A MSE 288 N ? ? A LEU 286 A MSE 287 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale22 covale both ? A MSE 288 C ? ? ? 1_555 A HIS 289 N ? ? A MSE 287 A HIS 288 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale23 covale both ? A LEU 307 C ? ? ? 1_555 A MSE 308 N ? ? A LEU 306 A MSE 307 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale24 covale both ? A MSE 308 C ? ? ? 1_555 A GLN 309 N ? ? A MSE 307 A GLN 308 1_555 ? ? ? ? ? ? ? 1.322 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 242 ? ARG A 243 ? LEU A 241 ARG A 242 A 2 GLU A 253 ? CYS A 262 ? GLU A 252 CYS A 261 A 3 MSE A 246 ? SER A 250 ? MSE A 245 SER A 249 A 4 VAL A 130 ? PHE A 139 ? VAL A 129 PHE A 138 A 5 HIS A 21 ? ALA A 29 ? HIS A 20 ALA A 28 A 6 LEU A 103 ? CYS A 109 ? LEU A 102 CYS A 108 A 7 ASN A 61 ? GLY A 67 ? ASN A 60 GLY A 66 A 8 THR A 291 ? ALA A 301 ? THR A 290 ALA A 300 A 9 SER A 179 ? HIS A 188 ? SER A 178 HIS A 187 A 10 GLU A 253 ? CYS A 262 ? GLU A 252 CYS A 261 B 1 MSE A 89 ? GLU A 91 ? MSE A 88 GLU A 90 B 2 ARG A 94 ? ALA A 96 ? ARG A 93 ALA A 95 C 1 LEU A 231 ? LYS A 232 ? LEU A 230 LYS A 231 C 2 SER A 238 ? ILE A 239 ? SER A 237 ILE A 238 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 242 ? N LEU A 241 O THR A 261 ? O THR A 260 A 2 3 O MSE A 257 ? O MSE A 256 N MSE A 246 ? N MSE A 245 A 3 4 O PRO A 247 ? O PRO A 246 N PHE A 139 ? N PHE A 138 A 4 5 O VAL A 133 ? O VAL A 132 N MSE A 26 ? N MSE A 25 A 5 6 N VAL A 23 ? N VAL A 22 O LEU A 107 ? O LEU A 106 A 6 7 O ARG A 108 ? O ARG A 107 N ASN A 61 ? N ASN A 60 A 7 8 N ILE A 66 ? N ILE A 65 O PHE A 300 ? O PHE A 299 A 8 9 O SER A 292 ? O SER A 291 N ALA A 187 ? N ALA A 186 A 9 10 N HIS A 182 ? N HIS A 181 O SER A 260 ? O SER A 259 B 1 2 N MSE A 89 ? N MSE A 88 O ALA A 96 ? O ALA A 95 C 1 2 N LEU A 231 ? N LEU A 230 O ILE A 239 ? O ILE A 238 # _atom_sites.entry_id 2HAG _atom_sites.fract_transf_matrix[1][1] 0.01060 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01060 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00880 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 ASP 3 2 ? ? ? A . n A 1 4 ILE 4 3 ? ? ? A . n A 1 5 GLN 5 4 ? ? ? A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 MSE 7 6 6 MSE MSE A . n A 1 8 PRO 8 7 7 PRO PRO A . n A 1 9 ARG 9 8 8 ARG ARG A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 GLN 11 10 10 GLN GLN A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 CYS 15 14 14 CYS CYS A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 HIS 21 20 20 HIS HIS A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 VAL 23 22 22 VAL VAL A . n A 1 24 TYR 24 23 23 TYR TYR A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 MSE 26 25 25 MSE MSE A . n A 1 27 PHE 27 26 26 PHE PHE A . n A 1 28 ASN 28 27 27 ASN ASN A . n A 1 29 ALA 29 28 28 ALA ALA A . n A 1 30 ASN 30 29 29 ASN ASN A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 ASN 32 31 31 ASN ASN A . n A 1 33 VAL 33 32 32 VAL VAL A . n A 1 34 GLU 34 33 33 GLU GLU A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 GLN 36 35 35 GLN GLN A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 ARG 38 37 37 ARG ARG A . n A 1 39 PRO 39 38 38 PRO PRO A . n A 1 40 CYS 40 39 39 CYS CYS A . n A 1 41 ILE 41 40 40 ILE ILE A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 ASN 43 42 42 ASN ASN A . n A 1 44 VAL 44 43 43 VAL VAL A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 GLN 46 45 45 GLN GLN A . n A 1 47 TYR 47 46 46 TYR TYR A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 TYR 49 48 48 TYR TYR A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 ASP 53 52 52 ASP ASP A . n A 1 54 GLN 54 53 53 GLN GLN A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 ASP 57 56 56 ASP ASP A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 PHE 60 59 59 PHE PHE A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 PHE 63 62 62 PHE PHE A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 ALA 65 64 64 ALA ALA A . n A 1 66 ILE 66 65 65 ILE ILE A . n A 1 67 GLY 67 66 66 GLY GLY A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 ASN 69 68 68 ASN ASN A . n A 1 70 TYR 70 69 69 TYR TYR A . n A 1 71 TRP 71 70 70 TRP TRP A . n A 1 72 ASP 72 71 71 ASP ASP A . n A 1 73 SER 73 72 72 SER SER A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 TYR 75 74 74 TYR TYR A . n A 1 76 PRO 76 75 75 PRO PRO A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 SER 78 77 77 SER SER A . n A 1 79 ARG 79 78 78 ARG ARG A . n A 1 80 PRO 80 79 79 PRO PRO A . n A 1 81 GLU 81 80 80 GLU GLU A . n A 1 82 MSE 82 81 81 MSE MSE A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 LYS 84 83 83 LYS LYS A . n A 1 85 PRO 85 84 84 PRO PRO A . n A 1 86 PHE 86 85 85 PHE PHE A . n A 1 87 PRO 87 86 86 PRO PRO A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 MSE 89 88 88 MSE MSE A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 ASN 93 92 92 ASN ASN A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 TYR 101 100 100 TYR TYR A . n A 1 102 ASP 102 101 101 ASP ASP A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 PHE 104 103 103 PHE PHE A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 HIS 106 105 105 HIS HIS A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 ARG 108 107 107 ARG ARG A . n A 1 109 CYS 109 108 108 CYS CYS A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 ARG 111 110 110 ARG ARG A . n A 1 112 TYR 112 111 111 TYR TYR A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 ILE 114 113 113 ILE ILE A . n A 1 115 LEU 115 114 114 LEU LEU A . n A 1 116 HIS 116 115 115 HIS HIS A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 VAL 118 117 117 VAL VAL A . n A 1 119 ALA 119 118 118 ALA ALA A . n A 1 120 ASN 120 119 119 ASN ASN A . n A 1 121 GLU 121 120 120 GLU GLU A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 SER 123 122 122 SER SER A . n A 1 124 GLN 124 123 123 GLN GLN A . n A 1 125 MSE 125 124 124 MSE MSE A . n A 1 126 PHE 126 125 125 PHE PHE A . n A 1 127 GLU 127 126 126 GLU GLU A . n A 1 128 ASP 128 127 127 ASP ASP A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 VAL 130 129 129 VAL VAL A . n A 1 131 GLU 131 130 130 GLU GLU A . n A 1 132 LEU 132 131 131 LEU LEU A . n A 1 133 VAL 133 132 132 VAL VAL A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 GLU 135 134 134 GLU GLU A . n A 1 136 GLU 136 135 135 GLU GLU A . n A 1 137 ARG 137 136 136 ARG ARG A . n A 1 138 GLY 138 137 137 GLY GLY A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 ARG 140 139 139 ARG ARG A . n A 1 141 PHE 141 140 140 PHE PHE A . n A 1 142 MSE 142 141 141 MSE MSE A . n A 1 143 ASP 143 142 142 ASP ASP A . n A 1 144 SER 144 143 143 SER SER A . n A 1 145 ARG 145 144 144 ARG ARG A . n A 1 146 ASP 146 145 145 ASP ASP A . n A 1 147 LEU 147 146 146 LEU LEU A . n A 1 148 THR 148 147 147 THR THR A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 PHE 150 149 149 PHE PHE A . n A 1 151 VAL 151 150 150 VAL VAL A . n A 1 152 ASP 152 151 151 ASP ASP A . n A 1 153 GLY 153 152 152 GLY GLY A . n A 1 154 THR 154 153 153 THR THR A . n A 1 155 GLU 155 154 154 GLU GLU A . n A 1 156 ASN 156 155 155 ASN ASN A . n A 1 157 PRO 157 156 156 PRO PRO A . n A 1 158 LYS 158 157 157 LYS LYS A . n A 1 159 GLY 159 158 158 GLY GLY A . n A 1 160 ARG 160 159 159 ARG ARG A . n A 1 161 HIS 161 160 160 HIS HIS A . n A 1 162 ARG 162 161 161 ARG ARG A . n A 1 163 GLN 163 162 162 GLN GLN A . n A 1 164 GLU 164 163 163 GLU GLU A . n A 1 165 VAL 165 164 164 VAL VAL A . n A 1 166 ALA 166 165 165 ALA ALA A . n A 1 167 LEU 167 166 166 LEU LEU A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 SER 170 169 169 SER SER A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 ASP 172 171 171 ASP ASP A . n A 1 173 PRO 173 172 172 PRO PRO A . n A 1 174 GLU 174 173 173 GLU GLU A . n A 1 175 PHE 175 174 174 PHE PHE A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 GLY 178 177 177 GLY GLY A . n A 1 179 SER 179 178 178 SER SER A . n A 1 180 TYR 180 179 179 TYR TYR A . n A 1 181 ILE 181 180 180 ILE ILE A . n A 1 182 HIS 182 181 181 HIS HIS A . n A 1 183 VAL 183 182 182 VAL VAL A . n A 1 184 GLN 184 183 183 GLN GLN A . n A 1 185 LYS 185 184 184 LYS LYS A . n A 1 186 TYR 186 185 185 TYR TYR A . n A 1 187 ALA 187 186 186 ALA ALA A . n A 1 188 HIS 188 187 187 HIS HIS A . n A 1 189 ASN 189 188 188 ASN ASN A . n A 1 190 LEU 190 189 189 LEU LEU A . n A 1 191 SER 191 190 190 SER SER A . n A 1 192 LYS 192 191 191 LYS LYS A . n A 1 193 TRP 193 192 192 TRP TRP A . n A 1 194 HIS 194 193 193 HIS HIS A . n A 1 195 ARG 195 194 194 ARG ARG A . n A 1 196 LEU 196 195 195 LEU LEU A . n A 1 197 PRO 197 196 196 PRO PRO A . n A 1 198 LEU 198 197 197 LEU LEU A . n A 1 199 LYS 199 198 198 LYS LYS A . n A 1 200 LYS 200 199 199 LYS LYS A . n A 1 201 GLN 201 200 200 GLN GLN A . n A 1 202 GLU 202 201 201 GLU GLU A . n A 1 203 ASP 203 202 202 ASP ASP A . n A 1 204 ILE 204 203 203 ILE ILE A . n A 1 205 ILE 205 204 204 ILE ILE A . n A 1 206 GLY 206 205 205 GLY GLY A . n A 1 207 ARG 207 206 206 ARG ARG A . n A 1 208 THR 208 207 207 THR THR A . n A 1 209 LYS 209 208 208 LYS LYS A . n A 1 210 GLN 210 209 209 GLN GLN A . n A 1 211 ASP 211 210 210 ASP ASP A . n A 1 212 ASN 212 211 211 ASN ASN A . n A 1 213 ILE 213 212 212 ILE ILE A . n A 1 214 GLU 214 213 213 GLU GLU A . n A 1 215 TYR 215 214 214 TYR TYR A . n A 1 216 GLU 216 215 215 GLU GLU A . n A 1 217 SER 217 216 216 SER SER A . n A 1 218 GLU 218 217 217 GLU GLU A . n A 1 219 ASP 219 218 218 ASP ASP A . n A 1 220 LYS 220 219 219 LYS LYS A . n A 1 221 PRO 221 220 220 PRO PRO A . n A 1 222 LEU 222 221 221 LEU LEU A . n A 1 223 THR 223 222 222 THR THR A . n A 1 224 SER 224 223 223 SER SER A . n A 1 225 HIS 225 224 224 HIS HIS A . n A 1 226 ILE 226 225 225 ILE ILE A . n A 1 227 LYS 227 226 226 LYS LYS A . n A 1 228 ARG 228 227 227 ARG ARG A . n A 1 229 VAL 229 228 228 VAL VAL A . n A 1 230 ASN 230 229 229 ASN ASN A . n A 1 231 LEU 231 230 230 LEU LEU A . n A 1 232 LYS 232 231 231 LYS LYS A . n A 1 233 ASP 233 232 232 ASP ASP A . n A 1 234 GLU 234 233 233 GLU GLU A . n A 1 235 ASN 235 234 234 ASN ASN A . n A 1 236 GLY 236 235 235 GLY GLY A . n A 1 237 LYS 237 236 236 LYS LYS A . n A 1 238 SER 238 237 237 SER SER A . n A 1 239 ILE 239 238 238 ILE ILE A . n A 1 240 GLU 240 239 239 GLU GLU A . n A 1 241 ILE 241 240 240 ILE ILE A . n A 1 242 LEU 242 241 241 LEU LEU A . n A 1 243 ARG 243 242 242 ARG ARG A . n A 1 244 GLN 244 243 243 GLN GLN A . n A 1 245 SER 245 244 244 SER SER A . n A 1 246 MSE 246 245 245 MSE MSE A . n A 1 247 PRO 247 246 246 PRO PRO A . n A 1 248 TYR 248 247 247 TYR TYR A . n A 1 249 GLY 249 248 248 GLY GLY A . n A 1 250 SER 250 249 249 SER SER A . n A 1 251 LEU 251 250 250 LEU LEU A . n A 1 252 LYS 252 251 251 LYS LYS A . n A 1 253 GLU 253 252 252 GLU GLU A . n A 1 254 GLN 254 253 253 GLN GLN A . n A 1 255 GLY 255 254 254 GLY GLY A . n A 1 256 LEU 256 255 255 LEU LEU A . n A 1 257 MSE 257 256 256 MSE MSE A . n A 1 258 PHE 258 257 257 PHE PHE A . n A 1 259 ILE 259 258 258 ILE ILE A . n A 1 260 SER 260 259 259 SER SER A . n A 1 261 THR 261 260 260 THR THR A . n A 1 262 CYS 262 261 261 CYS CYS A . n A 1 263 ARG 263 262 262 ARG ARG A . n A 1 264 THR 264 263 263 THR THR A . n A 1 265 PRO 265 264 264 PRO PRO A . n A 1 266 ASP 266 265 265 ASP ASP A . n A 1 267 HIS 267 266 266 HIS HIS A . n A 1 268 PHE 268 267 267 PHE PHE A . n A 1 269 GLU 269 268 268 GLU GLU A . n A 1 270 LYS 270 269 269 LYS LYS A . n A 1 271 MSE 271 270 270 MSE MSE A . n A 1 272 LEU 272 271 271 LEU LEU A . n A 1 273 HIS 273 272 272 HIS HIS A . n A 1 274 SER 274 273 273 SER SER A . n A 1 275 MSE 275 274 274 MSE MSE A . n A 1 276 VAL 276 275 275 VAL VAL A . n A 1 277 PHE 277 276 276 PHE PHE A . n A 1 278 GLY 278 277 277 GLY GLY A . n A 1 279 ASP 279 278 278 ASP ASP A . n A 1 280 GLY 280 279 279 GLY GLY A . n A 1 281 ALA 281 280 280 ALA ALA A . n A 1 282 GLY 282 281 281 GLY GLY A . n A 1 283 ASN 283 282 282 ASN ASN A . n A 1 284 HIS 284 283 283 HIS HIS A . n A 1 285 ASP 285 284 284 ASP ASP A . n A 1 286 HIS 286 285 285 HIS HIS A . n A 1 287 LEU 287 286 286 LEU LEU A . n A 1 288 MSE 288 287 287 MSE MSE A . n A 1 289 HIS 289 288 288 HIS HIS A . n A 1 290 PHE 290 289 289 PHE PHE A . n A 1 291 THR 291 290 290 THR THR A . n A 1 292 SER 292 291 291 SER SER A . n A 1 293 ALA 293 292 292 ALA ALA A . n A 1 294 LEU 294 293 293 LEU LEU A . n A 1 295 THR 295 294 294 THR THR A . n A 1 296 GLY 296 295 295 GLY GLY A . n A 1 297 SER 297 296 296 SER SER A . n A 1 298 SER 298 297 297 SER SER A . n A 1 299 PHE 299 298 298 PHE PHE A . n A 1 300 PHE 300 299 299 PHE PHE A . n A 1 301 ALA 301 300 300 ALA ALA A . n A 1 302 PRO 302 301 301 PRO PRO A . n A 1 303 SER 303 302 302 SER SER A . n A 1 304 LEU 304 303 303 LEU LEU A . n A 1 305 ASP 305 304 304 ASP ASP A . n A 1 306 PHE 306 305 305 PHE PHE A . n A 1 307 LEU 307 306 306 LEU LEU A . n A 1 308 MSE 308 307 307 MSE MSE A . n A 1 309 GLN 309 308 308 GLN GLN A . n A 1 310 PHE 310 309 309 PHE PHE A . n A 1 311 ASP 311 310 310 ASP ASP A . n A 1 312 ASN 312 311 311 ASN ASN A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 312 1 HOH HOH A . B 2 HOH 2 313 2 HOH HOH A . B 2 HOH 3 314 3 HOH HOH A . B 2 HOH 4 315 4 HOH HOH A . B 2 HOH 5 316 5 HOH HOH A . B 2 HOH 6 317 6 HOH HOH A . B 2 HOH 7 318 7 HOH HOH A . B 2 HOH 8 319 8 HOH HOH A . B 2 HOH 9 320 9 HOH HOH A . B 2 HOH 10 321 10 HOH HOH A . B 2 HOH 11 322 11 HOH HOH A . B 2 HOH 12 323 12 HOH HOH A . B 2 HOH 13 324 13 HOH HOH A . B 2 HOH 14 325 14 HOH HOH A . B 2 HOH 15 326 15 HOH HOH A . B 2 HOH 16 327 16 HOH HOH A . B 2 HOH 17 328 17 HOH HOH A . B 2 HOH 18 329 18 HOH HOH A . B 2 HOH 19 330 19 HOH HOH A . B 2 HOH 20 331 20 HOH HOH A . B 2 HOH 21 332 21 HOH HOH A . B 2 HOH 22 333 22 HOH HOH A . B 2 HOH 23 334 23 HOH HOH A . B 2 HOH 24 335 24 HOH HOH A . B 2 HOH 25 336 25 HOH HOH A . B 2 HOH 26 337 26 HOH HOH A . B 2 HOH 27 338 27 HOH HOH A . B 2 HOH 28 339 28 HOH HOH A . B 2 HOH 29 340 29 HOH HOH A . B 2 HOH 30 341 30 HOH HOH A . B 2 HOH 31 342 31 HOH HOH A . B 2 HOH 32 343 32 HOH HOH A . B 2 HOH 33 344 33 HOH HOH A . B 2 HOH 34 345 34 HOH HOH A . B 2 HOH 35 346 35 HOH HOH A . B 2 HOH 36 347 36 HOH HOH A . B 2 HOH 37 348 37 HOH HOH A . B 2 HOH 38 349 38 HOH HOH A . B 2 HOH 39 350 39 HOH HOH A . B 2 HOH 40 351 40 HOH HOH A . B 2 HOH 41 352 41 HOH HOH A . B 2 HOH 42 353 43 HOH HOH A . B 2 HOH 43 354 44 HOH HOH A . B 2 HOH 44 355 45 HOH HOH A . B 2 HOH 45 356 46 HOH HOH A . B 2 HOH 46 357 47 HOH HOH A . B 2 HOH 47 358 48 HOH HOH A . B 2 HOH 48 359 49 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 7 A MSE 6 ? MET SELENOMETHIONINE 2 A MSE 26 A MSE 25 ? MET SELENOMETHIONINE 3 A MSE 82 A MSE 81 ? MET SELENOMETHIONINE 4 A MSE 89 A MSE 88 ? MET SELENOMETHIONINE 5 A MSE 125 A MSE 124 ? MET SELENOMETHIONINE 6 A MSE 142 A MSE 141 ? MET SELENOMETHIONINE 7 A MSE 246 A MSE 245 ? MET SELENOMETHIONINE 8 A MSE 257 A MSE 256 ? MET SELENOMETHIONINE 9 A MSE 271 A MSE 270 ? MET SELENOMETHIONINE 10 A MSE 275 A MSE 274 ? MET SELENOMETHIONINE 11 A MSE 288 A MSE 287 ? MET SELENOMETHIONINE 12 A MSE 308 A MSE 307 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 113.6800000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-08 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 27.6410 _pdbx_refine_tls.origin_y 27.5140 _pdbx_refine_tls.origin_z 38.5230 _pdbx_refine_tls.T[1][1] -0.0295 _pdbx_refine_tls.T[2][2] -0.0528 _pdbx_refine_tls.T[3][3] -0.2081 _pdbx_refine_tls.T[1][2] -0.0812 _pdbx_refine_tls.T[1][3] 0.0601 _pdbx_refine_tls.T[2][3] 0.0299 _pdbx_refine_tls.L[1][1] 1.3060 _pdbx_refine_tls.L[2][2] 2.2233 _pdbx_refine_tls.L[3][3] 2.4529 _pdbx_refine_tls.L[1][2] -0.3974 _pdbx_refine_tls.L[1][3] -0.1321 _pdbx_refine_tls.L[2][3] -0.2717 _pdbx_refine_tls.S[1][1] 0.0486 _pdbx_refine_tls.S[2][2] -0.1279 _pdbx_refine_tls.S[3][3] 0.0794 _pdbx_refine_tls.S[1][2] 0.3797 _pdbx_refine_tls.S[1][3] 0.1498 _pdbx_refine_tls.S[2][3] -0.1833 _pdbx_refine_tls.S[2][1] -0.3947 _pdbx_refine_tls.S[3][1] -0.0518 _pdbx_refine_tls.S[3][2] 0.1326 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 6 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 312 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 5 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 311 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 REFMAC 5.2.0005 ? ? 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 2 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 SOLVE . ? ? ? ? phasing ? ? ? 6 RESOLVE . ? ? ? ? phasing ? ? ? 7 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 84 ? ? -53.78 172.92 2 1 GLN A 89 ? ? -171.93 146.72 3 1 ASN A 92 ? ? -66.62 17.76 4 1 GLU A 126 ? ? 56.32 -126.11 5 1 MSE A 141 ? ? 60.94 -141.53 6 1 ASP A 171 ? ? -150.77 72.60 7 1 ASP A 232 ? ? -66.99 -169.79 8 1 GLU A 252 ? ? -177.61 124.07 9 1 CYS A 261 ? ? -172.21 145.47 10 1 ASP A 310 ? ? -71.83 -168.83 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 PHE _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 309 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASP _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 310 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 139.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 5 ? CB ? A ASN 6 CB 2 1 Y 1 A ASN 5 ? CG ? A ASN 6 CG 3 1 Y 1 A ASN 5 ? OD1 ? A ASN 6 OD1 4 1 Y 1 A ASN 5 ? ND2 ? A ASN 6 ND2 5 1 Y 1 A SER 34 ? OG ? A SER 35 OG 6 1 Y 1 A ASP 127 ? OD1 ? A ASP 128 OD1 7 1 Y 1 A ASP 127 ? OD2 ? A ASP 128 OD2 8 1 Y 1 A GLU 154 ? OE1 ? A GLU 155 OE1 9 1 Y 1 A GLU 154 ? OE2 ? A GLU 155 OE2 10 1 Y 1 A LYS 157 ? CE ? A LYS 158 CE 11 1 Y 1 A LYS 157 ? NZ ? A LYS 158 NZ 12 1 Y 1 A ARG 159 ? CD ? A ARG 160 CD 13 1 Y 1 A ARG 159 ? NE ? A ARG 160 NE 14 1 Y 1 A ARG 159 ? CZ ? A ARG 160 CZ 15 1 Y 1 A ARG 159 ? NH1 ? A ARG 160 NH1 16 1 Y 1 A ARG 159 ? NH2 ? A ARG 160 NH2 17 1 Y 1 A GLU 233 ? OE1 ? A GLU 234 OE1 18 1 Y 1 A GLU 233 ? OE2 ? A GLU 234 OE2 19 1 Y 1 A LYS 236 ? CE ? A LYS 237 CE 20 1 Y 1 A LYS 236 ? NZ ? A LYS 237 NZ 21 1 Y 1 A ILE 238 ? CD1 ? A ILE 239 CD1 22 1 Y 1 A LYS 269 ? CD ? A LYS 270 CD 23 1 Y 1 A LYS 269 ? CE ? A LYS 270 CE 24 1 Y 1 A LYS 269 ? NZ ? A LYS 270 NZ 25 1 Y 1 A ASN 311 ? CG ? A ASN 312 CG 26 1 Y 1 A ASN 311 ? OD1 ? A ASN 312 OD1 27 1 Y 1 A ASN 311 ? ND2 ? A ASN 312 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A ASP 2 ? A ASP 3 4 1 Y 1 A ILE 3 ? A ILE 4 5 1 Y 1 A GLN 4 ? A GLN 5 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #