data_2J61 # _entry.id 2J61 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2J61 pdb_00002j61 10.2210/pdb2j61/pdb PDBE EBI-30027 ? ? WWPDB D_1290030027 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2J0G unspecified 'L-FICOLIN COMPLEXED TO N-ACETYL-MANNOSAMINE' PDB 2J0H unspecified 'L-FICOLIN COMPLEXED TO ACETYL-CHOLINE' PDB 2J0Y unspecified 'L-FICOLIN COMPLEXED TO B-1,3-D-GLUCAN' PDB 2J1G unspecified 'L-FICOLIN COMPLEXED TO N-ACETYL-CYSTEIN' PDB 2J2P unspecified 'L-FICOLIN COMPLEXED TO N-ACETYL-CYSTEIN (50MM)' PDB 2J3F unspecified 'L-FICOLIN COMPLEXED TO N-ACETYL-D- GALACTOSAMIN' PDB 2J3G unspecified L-FICOLIN PDB 2J3O unspecified 'L-FICOLIN COMPLEXED TO N-ACETYL-D- GLUCOSAMIN' PDB 2J3U unspecified 'L-FICOLIN COMPLEXED TO GALACTOSE' PDB 2J60 unspecified 'H-FICOLIN COMPLEXED TO D-FUCOSE' PDB 2J5Z unspecified 'H-FICOLIN COMPLEXED TO GALACTOSE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2J61 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-09-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Garlatti, V.' 1 'Gaboriaud, C.' 2 # _citation.id primary _citation.title 'Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 26 _citation.page_first 623 _citation.page_last ? _citation.year 2007 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17215869 _citation.pdbx_database_id_DOI 10.1038/SJ.EMBOJ.7601500 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Garlatti, V.' 1 ? primary 'Belloy, N.' 2 ? primary 'Martin, L.' 3 ? primary 'Lacroix, M.' 4 ? primary 'Matsushita, M.' 5 ? primary 'Endo, Y.' 6 ? primary 'Fujita, T.' 7 ? primary 'Fontecilla-Camps, J.C.' 8 ? primary 'Arlaud, G.J.' 9 ? primary 'Thielens, N.M.' 10 ? primary 'Gaboriaud, C.' 11 ? # _cell.entry_id 2J61 _cell.length_a 79.591 _cell.length_b 79.591 _cell.length_c 172.040 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J61 _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man FICOLIN-2 24757.332 1 ? ? 'BINDING DOMAIN, RESIDUES 97-313' ? 2 polymer man FICOLIN-2 24729.318 1 ? ? 'BINDING DOMAIN, RESIDUES 97-313' ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 water nat water 18.015 62 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'COLLAGEN/FIBRINOGEN DOMAIN-CONTAINING PROTEIN 2, FICOLIN-B, FICOLIN B, SERUM LECTIN P35, EBP-37, HUCOLIN, L-FICOLIN' 2 'COLLAGEN/FIBRINOGEN DOMAIN-CONTAINING PROTEIN 2, FICOLIN-B, FICOLIN B, SERUM LECTIN P35, EBP-37, HUCOLIN, L-FICOLIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NPCLTGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWL GNDNIHALTAQGTSELRTDLVDFEDNYQFAKYRSFRVADEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTG NCAVMFQGAWWYKNCHTSNLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA ; ;NPCLTGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWL GNDNIHALTAQGTSELRTDLVDFEDNYQFAKYRSFRVADEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTG NCAVMFQGAWWYKNCHTSNLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA ; A ? 2 'polypeptide(L)' no no ;NPCLTGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWL GNDNIHALTAQGTSELRTDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTG NCAVMFQGAWWYKNCHTSNLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA ; ;NPCLTGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWL GNDNIHALTAQGTSELRTDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTG NCAVMFQGAWWYKNCHTSNLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 PRO n 1 3 CYS n 1 4 LEU n 1 5 THR n 1 6 GLY n 1 7 PRO n 1 8 ARG n 1 9 THR n 1 10 CYS n 1 11 LYS n 1 12 ASP n 1 13 LEU n 1 14 LEU n 1 15 ASP n 1 16 ARG n 1 17 GLY n 1 18 HIS n 1 19 PHE n 1 20 LEU n 1 21 SER n 1 22 GLY n 1 23 TRP n 1 24 HIS n 1 25 THR n 1 26 ILE n 1 27 TYR n 1 28 LEU n 1 29 PRO n 1 30 ASP n 1 31 CYS n 1 32 ARG n 1 33 PRO n 1 34 LEU n 1 35 THR n 1 36 VAL n 1 37 LEU n 1 38 CYS n 1 39 ASP n 1 40 MET n 1 41 ASP n 1 42 THR n 1 43 ASP n 1 44 GLY n 1 45 GLY n 1 46 GLY n 1 47 TRP n 1 48 THR n 1 49 VAL n 1 50 PHE n 1 51 GLN n 1 52 ARG n 1 53 ARG n 1 54 VAL n 1 55 ASP n 1 56 GLY n 1 57 SER n 1 58 VAL n 1 59 ASP n 1 60 PHE n 1 61 TYR n 1 62 ARG n 1 63 ASP n 1 64 TRP n 1 65 ALA n 1 66 THR n 1 67 TYR n 1 68 LYS n 1 69 GLN n 1 70 GLY n 1 71 PHE n 1 72 GLY n 1 73 SER n 1 74 ARG n 1 75 LEU n 1 76 GLY n 1 77 GLU n 1 78 PHE n 1 79 TRP n 1 80 LEU n 1 81 GLY n 1 82 ASN n 1 83 ASP n 1 84 ASN n 1 85 ILE n 1 86 HIS n 1 87 ALA n 1 88 LEU n 1 89 THR n 1 90 ALA n 1 91 GLN n 1 92 GLY n 1 93 THR n 1 94 SER n 1 95 GLU n 1 96 LEU n 1 97 ARG n 1 98 THR n 1 99 ASP n 1 100 LEU n 1 101 VAL n 1 102 ASP n 1 103 PHE n 1 104 GLU n 1 105 ASP n 1 106 ASN n 1 107 TYR n 1 108 GLN n 1 109 PHE n 1 110 ALA n 1 111 LYS n 1 112 TYR n 1 113 ARG n 1 114 SER n 1 115 PHE n 1 116 ARG n 1 117 VAL n 1 118 ALA n 1 119 ASP n 1 120 GLU n 1 121 ALA n 1 122 GLU n 1 123 LYS n 1 124 TYR n 1 125 ASN n 1 126 LEU n 1 127 VAL n 1 128 LEU n 1 129 GLY n 1 130 ALA n 1 131 PHE n 1 132 VAL n 1 133 GLU n 1 134 GLY n 1 135 SER n 1 136 ALA n 1 137 GLY n 1 138 ASP n 1 139 SER n 1 140 LEU n 1 141 THR n 1 142 PHE n 1 143 HIS n 1 144 ASN n 1 145 ASN n 1 146 GLN n 1 147 SER n 1 148 PHE n 1 149 SER n 1 150 THR n 1 151 LYS n 1 152 ASP n 1 153 GLN n 1 154 ASP n 1 155 ASN n 1 156 ASP n 1 157 LEU n 1 158 ASN n 1 159 THR n 1 160 GLY n 1 161 ASN n 1 162 CYS n 1 163 ALA n 1 164 VAL n 1 165 MET n 1 166 PHE n 1 167 GLN n 1 168 GLY n 1 169 ALA n 1 170 TRP n 1 171 TRP n 1 172 TYR n 1 173 LYS n 1 174 ASN n 1 175 CYS n 1 176 HIS n 1 177 THR n 1 178 SER n 1 179 ASN n 1 180 LEU n 1 181 ASN n 1 182 GLY n 1 183 ARG n 1 184 TYR n 1 185 LEU n 1 186 ARG n 1 187 GLY n 1 188 THR n 1 189 HIS n 1 190 GLY n 1 191 SER n 1 192 PHE n 1 193 ALA n 1 194 ASN n 1 195 GLY n 1 196 ILE n 1 197 ASN n 1 198 TRP n 1 199 LYS n 1 200 SER n 1 201 GLY n 1 202 LYS n 1 203 GLY n 1 204 TYR n 1 205 ASN n 1 206 TYR n 1 207 SER n 1 208 TYR n 1 209 LYS n 1 210 VAL n 1 211 SER n 1 212 GLU n 1 213 MET n 1 214 LYS n 1 215 VAL n 1 216 ARG n 1 217 PRO n 1 218 ALA n 2 1 ASN n 2 2 PRO n 2 3 CYS n 2 4 LEU n 2 5 THR n 2 6 GLY n 2 7 PRO n 2 8 ARG n 2 9 THR n 2 10 CYS n 2 11 LYS n 2 12 ASP n 2 13 LEU n 2 14 LEU n 2 15 ASP n 2 16 ARG n 2 17 GLY n 2 18 HIS n 2 19 PHE n 2 20 LEU n 2 21 SER n 2 22 GLY n 2 23 TRP n 2 24 HIS n 2 25 THR n 2 26 ILE n 2 27 TYR n 2 28 LEU n 2 29 PRO n 2 30 ASP n 2 31 CYS n 2 32 ARG n 2 33 PRO n 2 34 LEU n 2 35 THR n 2 36 VAL n 2 37 LEU n 2 38 CYS n 2 39 ASP n 2 40 MET n 2 41 ASP n 2 42 THR n 2 43 ASP n 2 44 GLY n 2 45 GLY n 2 46 GLY n 2 47 TRP n 2 48 THR n 2 49 VAL n 2 50 PHE n 2 51 GLN n 2 52 ARG n 2 53 ARG n 2 54 VAL n 2 55 ASP n 2 56 GLY n 2 57 SER n 2 58 VAL n 2 59 ASP n 2 60 PHE n 2 61 TYR n 2 62 ARG n 2 63 ASP n 2 64 TRP n 2 65 ALA n 2 66 THR n 2 67 TYR n 2 68 LYS n 2 69 GLN n 2 70 GLY n 2 71 PHE n 2 72 GLY n 2 73 SER n 2 74 ARG n 2 75 LEU n 2 76 GLY n 2 77 GLU n 2 78 PHE n 2 79 TRP n 2 80 LEU n 2 81 GLY n 2 82 ASN n 2 83 ASP n 2 84 ASN n 2 85 ILE n 2 86 HIS n 2 87 ALA n 2 88 LEU n 2 89 THR n 2 90 ALA n 2 91 GLN n 2 92 GLY n 2 93 THR n 2 94 SER n 2 95 GLU n 2 96 LEU n 2 97 ARG n 2 98 THR n 2 99 ASP n 2 100 LEU n 2 101 VAL n 2 102 ASP n 2 103 PHE n 2 104 GLU n 2 105 ASP n 2 106 ASN n 2 107 TYR n 2 108 GLN n 2 109 PHE n 2 110 ALA n 2 111 LYS n 2 112 TYR n 2 113 ARG n 2 114 SER n 2 115 PHE n 2 116 LYS n 2 117 VAL n 2 118 ALA n 2 119 ASP n 2 120 GLU n 2 121 ALA n 2 122 GLU n 2 123 LYS n 2 124 TYR n 2 125 ASN n 2 126 LEU n 2 127 VAL n 2 128 LEU n 2 129 GLY n 2 130 ALA n 2 131 PHE n 2 132 VAL n 2 133 GLU n 2 134 GLY n 2 135 SER n 2 136 ALA n 2 137 GLY n 2 138 ASP n 2 139 SER n 2 140 LEU n 2 141 THR n 2 142 PHE n 2 143 HIS n 2 144 ASN n 2 145 ASN n 2 146 GLN n 2 147 SER n 2 148 PHE n 2 149 SER n 2 150 THR n 2 151 LYS n 2 152 ASP n 2 153 GLN n 2 154 ASP n 2 155 ASN n 2 156 ASP n 2 157 LEU n 2 158 ASN n 2 159 THR n 2 160 GLY n 2 161 ASN n 2 162 CYS n 2 163 ALA n 2 164 VAL n 2 165 MET n 2 166 PHE n 2 167 GLN n 2 168 GLY n 2 169 ALA n 2 170 TRP n 2 171 TRP n 2 172 TYR n 2 173 LYS n 2 174 ASN n 2 175 CYS n 2 176 HIS n 2 177 THR n 2 178 SER n 2 179 ASN n 2 180 LEU n 2 181 ASN n 2 182 GLY n 2 183 ARG n 2 184 TYR n 2 185 LEU n 2 186 ARG n 2 187 GLY n 2 188 THR n 2 189 HIS n 2 190 GLY n 2 191 SER n 2 192 PHE n 2 193 ALA n 2 194 ASN n 2 195 GLY n 2 196 ILE n 2 197 ASN n 2 198 TRP n 2 199 LYS n 2 200 SER n 2 201 GLY n 2 202 LYS n 2 203 GLY n 2 204 TYR n 2 205 ASN n 2 206 TYR n 2 207 SER n 2 208 TYR n 2 209 LYS n 2 210 VAL n 2 211 SER n 2 212 GLU n 2 213 MET n 2 214 LYS n 2 215 VAL n 2 216 ARG n 2 217 PRO n 2 218 ALA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? PLASMA ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'TRICHOPLUSIA NI' 7111 ? ? ? ? ? ? ? ? 'High Five' ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? PLASMA ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'TRICHOPLUSIA NI' 7111 ? ? ? ? ? ? ? ? 'High Five' ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2J61 1 ? ? 2J61 ? 2 UNP FCN2_HUMAN 1 ? ? Q15485 ? 3 PDB 2J61 2 ? ? 2J61 ? 4 UNP FCN2_HUMAN 2 ? ? Q15485 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2J61 A 1 ? 1 ? 2J61 71 ? 71 ? 71 71 2 2 2J61 A 2 ? 218 ? Q15485 97 ? 313 ? 72 288 3 3 2J61 B 1 ? 1 ? 2J61 71 ? 71 ? 71 71 4 4 2J61 B 2 ? 218 ? Q15485 97 ? 313 ? 72 288 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2J61 THR A 98 ? UNP Q15485 VAL 193 conflict 168 1 1 2J61 ARG A 116 ? UNP Q15485 LYS 211 conflict 186 2 1 2J61 THR A 177 ? UNP Q15485 VAL 272 conflict 247 3 3 2J61 THR B 98 ? UNP Q15485 VAL 193 conflict 168 4 3 2J61 THR B 177 ? UNP Q15485 VAL 272 conflict 247 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2J61 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_percent_sol 60.80 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-04-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9206 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength 0.9206 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2J61 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.390 _reflns.d_resolution_high 2.700 _reflns.number_obs 16911 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.05000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.6000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.900 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2J61 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15836 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.70 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.212 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.207 _refine.ls_R_factor_R_free 0.291 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.900 _refine.ls_number_reflns_R_free 990 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.928 _refine.correlation_coeff_Fo_to_Fc_free 0.867 _refine.B_iso_mean 56.49 _refine.aniso_B[1][1] 3.03000 _refine.aniso_B[2][2] 3.03000 _refine.aniso_B[3][3] -4.55000 _refine.aniso_B[1][2] 1.52000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1JC9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.843 _refine.pdbx_overall_ESU_R_Free 0.380 _refine.overall_SU_ML 0.331 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 16.011 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3458 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 3537 _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.021 ? 3591 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.043 1.914 ? 4866 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.238 5.000 ? 430 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.135 0.200 ? 487 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 2843 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.295 0.300 ? 1995 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.274 0.500 ? 293 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.258 0.300 ? 37 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.271 0.500 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.349 2.000 ? 2122 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.444 3.000 ? 3376 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.252 3.000 ? 1469 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.400 4.000 ? 1490 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 15 _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.79 _refine_ls_shell.number_reflns_R_work 1492 _refine_ls_shell.R_factor_R_work 0.2410 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3960 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 98 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2J61 _struct.title 'L-ficolin complexed to N-acetylglucosamine (forme C)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2J61 _struct_keywords.pdbx_keywords LECTIN _struct_keywords.text 'GLYCOPROTEIN, FICRINOGEN-LIKE, INNATE IMMUNITY, PATTERN RECOGNITION PROTEIN, LECTIN, COLLAGEN, IMMUNOLOGY, LECTIN- LIKE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 3 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 9 ? ARG A 16 ? THR A 79 ARG A 86 1 ? 8 HELX_P HELX_P2 2 ASP A 41 ? GLY A 45 ? ASP A 111 GLY A 115 5 ? 5 HELX_P HELX_P3 3 ASP A 63 ? GLY A 70 ? ASP A 133 GLY A 140 1 ? 8 HELX_P HELX_P4 4 GLY A 81 ? ALA A 90 ? GLY A 151 ALA A 160 1 ? 10 HELX_P HELX_P5 5 LEU A 140 ? ASN A 144 ? LEU A 210 ASN A 214 5 ? 5 HELX_P HELX_P6 6 ASN A 161 ? GLN A 167 ? ASN A 231 GLN A 237 1 ? 7 HELX_P HELX_P7 7 LYS A 199 ? GLY A 203 ? LYS A 269 GLY A 273 1 ? 5 HELX_P HELX_P8 8 THR B 9 ? ARG B 16 ? THR B 79 ARG B 86 1 ? 8 HELX_P HELX_P9 9 ASP B 41 ? GLY B 45 ? ASP B 111 GLY B 115 5 ? 5 HELX_P HELX_P10 10 ASP B 63 ? GLY B 70 ? ASP B 133 GLY B 140 1 ? 8 HELX_P HELX_P11 11 GLY B 81 ? ALA B 90 ? GLY B 151 ALA B 160 1 ? 10 HELX_P HELX_P12 12 LEU B 140 ? ASN B 144 ? LEU B 210 ASN B 214 5 ? 5 HELX_P HELX_P13 13 ASN B 161 ? PHE B 166 ? ASN B 231 PHE B 236 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 31 SG ? ? A CYS 73 A CYS 101 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf2 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 38 SG ? ? A CYS 80 A CYS 108 1_555 ? ? ? ? ? ? ? 2.080 ? ? disulf3 disulf ? ? A CYS 162 SG ? ? ? 1_555 A CYS 175 SG ? ? A CYS 232 A CYS 245 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf4 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 31 SG ? ? B CYS 73 B CYS 101 1_555 ? ? ? ? ? ? ? 2.099 ? ? disulf5 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 38 SG ? ? B CYS 80 B CYS 108 1_555 ? ? ? ? ? ? ? 2.090 ? ? disulf6 disulf ? ? B CYS 162 SG ? ? ? 1_555 B CYS 175 SG ? ? B CYS 232 B CYS 245 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A LYS 214 NZ ? ? ? 1_555 D NAG . O4 ? ? A LYS 284 A NAG 1290 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc1 metalc ? ? A ASP 154 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 224 A CA 1289 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc2 metalc ? ? A ASP 154 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 224 A CA 1289 1_555 ? ? ? ? ? ? ? 2.763 ? ? metalc3 metalc ? ? A ASP 156 O ? ? ? 1_555 C CA . CA ? ? A ASP 226 A CA 1289 1_555 ? ? ? ? ? ? ? 3.358 ? ? metalc4 metalc ? ? A ASP 156 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 226 A CA 1289 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc5 metalc ? ? A ASP 156 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 226 A CA 1289 1_555 ? ? ? ? ? ? ? 3.369 ? ? metalc6 metalc ? ? A ASN 158 O ? ? ? 1_555 C CA . CA ? ? A ASN 228 A CA 1289 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc7 metalc ? ? A GLY 160 O ? ? ? 1_555 C CA . CA ? ? A GLY 230 A CA 1289 1_555 ? ? ? ? ? ? ? 2.489 ? ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 1289 A HOH 2023 1_555 ? ? ? ? ? ? ? 3.231 ? ? metalc9 metalc ? ? B ASP 154 OD2 ? ? ? 1_555 E CA . CA ? ? B ASP 224 B CA 1289 1_555 ? ? ? ? ? ? ? 3.231 ? ? metalc10 metalc ? ? B ASP 154 OD1 ? ? ? 1_555 E CA . CA ? ? B ASP 224 B CA 1289 1_555 ? ? ? ? ? ? ? 2.895 ? ? metalc11 metalc ? ? B ASP 156 OD2 ? ? ? 1_555 E CA . CA ? ? B ASP 226 B CA 1289 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc12 metalc ? ? B ASN 158 O ? ? ? 1_555 E CA . CA ? ? B ASN 228 B CA 1289 1_555 ? ? ? ? ? ? ? 2.501 ? ? metalc13 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? B CA 1289 B HOH 2024 1_555 ? ? ? ? ? ? ? 2.462 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 174 A . ? ASN 244 A CYS 175 A ? CYS 245 A 1 -10.62 2 ASN 174 B . ? ASN 244 B CYS 175 B ? CYS 245 B 1 -5.23 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 5 ? AC ? 2 ? AD ? 2 ? AE ? 2 ? BA ? 6 ? BB ? 5 ? BC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel BA 4 5 ? anti-parallel BA 5 6 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BB 4 5 ? anti-parallel BC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 22 ? TYR A 27 ? GLY A 92 TYR A 97 AA 2 PRO A 33 ? ASP A 39 ? PRO A 103 ASP A 109 AA 3 TRP A 47 ? ARG A 53 ? TRP A 117 ARG A 123 AA 4 VAL A 210 ? PRO A 217 ? VAL A 280 PRO A 287 AA 5 SER A 94 ? VAL A 101 ? SER A 164 VAL A 171 AA 6 TYR A 107 ? VAL A 117 ? TYR A 177 VAL A 187 AB 1 GLY A 22 ? TYR A 27 ? GLY A 92 TYR A 97 AB 2 PRO A 33 ? ASP A 39 ? PRO A 103 ASP A 109 AB 3 TRP A 47 ? ARG A 53 ? TRP A 117 ARG A 123 AB 4 PHE A 78 ? TRP A 79 ? PHE A 148 TRP A 149 AB 5 PHE A 71 ? GLY A 72 ? PHE A 141 GLY A 142 AC 1 SER A 149 ? THR A 150 ? SER A 219 THR A 220 AC 2 ALA A 169 ? TRP A 170 ? ALA A 239 TRP A 240 AD 1 SER A 178 ? ASN A 179 ? SER A 248 ASN A 249 AD 2 ASN A 197 ? TRP A 198 ? ASN A 267 TRP A 268 AE 1 GLY A 187 ? THR A 188 ? GLY A 257 THR A 258 AE 2 TYR A 206 ? SER A 207 ? TYR A 276 SER A 277 BA 1 GLY B 22 ? TYR B 27 ? GLY B 92 TYR B 97 BA 2 PRO B 33 ? ASP B 39 ? PRO B 103 ASP B 109 BA 3 TRP B 47 ? ARG B 53 ? TRP B 117 ARG B 123 BA 4 VAL B 210 ? PRO B 217 ? VAL B 280 PRO B 287 BA 5 SER B 94 ? VAL B 101 ? SER B 164 VAL B 171 BA 6 TYR B 107 ? PHE B 109 ? TYR B 177 PHE B 179 BB 1 GLY B 22 ? TYR B 27 ? GLY B 92 TYR B 97 BB 2 PRO B 33 ? ASP B 39 ? PRO B 103 ASP B 109 BB 3 TRP B 47 ? ARG B 53 ? TRP B 117 ARG B 123 BB 4 PHE B 78 ? TRP B 79 ? PHE B 148 TRP B 149 BB 5 PHE B 71 ? GLY B 72 ? PHE B 141 GLY B 142 BC 1 GLY B 187 ? THR B 188 ? GLY B 257 THR B 258 BC 2 TYR B 206 ? SER B 207 ? TYR B 276 SER B 277 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 26 ? N ILE A 96 O LEU A 34 ? O LEU A 104 AA 2 3 N ASP A 39 ? N ASP A 109 O TRP A 47 ? O TRP A 117 AA 3 4 N ARG A 53 ? N ARG A 123 O SER A 211 ? O SER A 281 AA 4 5 N ARG A 216 ? N ARG A 286 O GLU A 95 ? O GLU A 165 AA 5 6 N LEU A 100 ? N LEU A 170 O GLN A 108 ? O GLN A 178 AB 1 2 N ILE A 26 ? N ILE A 96 O LEU A 34 ? O LEU A 104 AB 2 3 N ASP A 39 ? N ASP A 109 O TRP A 47 ? O TRP A 117 AB 3 4 N ARG A 52 ? N ARG A 122 O PHE A 78 ? O PHE A 148 AB 4 5 N TRP A 79 ? N TRP A 149 O PHE A 71 ? O PHE A 141 AC 1 2 N SER A 149 ? N SER A 219 O TRP A 170 ? O TRP A 240 AD 1 2 N ASN A 179 ? N ASN A 249 O ASN A 197 ? O ASN A 267 AE 1 2 N GLY A 187 ? N GLY A 257 O SER A 207 ? O SER A 277 BA 1 2 N ILE B 26 ? N ILE B 96 O LEU B 34 ? O LEU B 104 BA 2 3 N ASP B 39 ? N ASP B 109 O TRP B 47 ? O TRP B 117 BA 3 4 N ARG B 53 ? N ARG B 123 O SER B 211 ? O SER B 281 BA 4 5 N ARG B 216 ? N ARG B 286 O GLU B 95 ? O GLU B 165 BA 5 6 N LEU B 100 ? N LEU B 170 O GLN B 108 ? O GLN B 178 BB 1 2 N ILE B 26 ? N ILE B 96 O LEU B 34 ? O LEU B 104 BB 2 3 N ASP B 39 ? N ASP B 109 O TRP B 47 ? O TRP B 117 BB 3 4 N ARG B 52 ? N ARG B 122 O PHE B 78 ? O PHE B 148 BB 4 5 N TRP B 79 ? N TRP B 149 O PHE B 71 ? O PHE B 141 BC 1 2 N GLY B 187 ? N GLY B 257 O SER B 207 ? O SER B 277 # _database_PDB_matrix.entry_id 2J61 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2J61 _atom_sites.fract_transf_matrix[1][1] 0.012564 _atom_sites.fract_transf_matrix[1][2] 0.007254 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014508 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005813 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 71 ? ? ? A . n A 1 2 PRO 2 72 ? ? ? A . n A 1 3 CYS 3 73 73 CYS CYS A . n A 1 4 LEU 4 74 74 LEU LEU A . n A 1 5 THR 5 75 75 THR THR A . n A 1 6 GLY 6 76 76 GLY GLY A . n A 1 7 PRO 7 77 77 PRO PRO A . n A 1 8 ARG 8 78 78 ARG ARG A . n A 1 9 THR 9 79 79 THR THR A . n A 1 10 CYS 10 80 80 CYS CYS A . n A 1 11 LYS 11 81 81 LYS LYS A . n A 1 12 ASP 12 82 82 ASP ASP A . n A 1 13 LEU 13 83 83 LEU LEU A . n A 1 14 LEU 14 84 84 LEU LEU A . n A 1 15 ASP 15 85 85 ASP ASP A . n A 1 16 ARG 16 86 86 ARG ARG A . n A 1 17 GLY 17 87 87 GLY GLY A . n A 1 18 HIS 18 88 88 HIS HIS A . n A 1 19 PHE 19 89 89 PHE PHE A . n A 1 20 LEU 20 90 90 LEU LEU A . n A 1 21 SER 21 91 91 SER SER A . n A 1 22 GLY 22 92 92 GLY GLY A . n A 1 23 TRP 23 93 93 TRP TRP A . n A 1 24 HIS 24 94 94 HIS HIS A . n A 1 25 THR 25 95 95 THR THR A . n A 1 26 ILE 26 96 96 ILE ILE A . n A 1 27 TYR 27 97 97 TYR TYR A . n A 1 28 LEU 28 98 98 LEU LEU A . n A 1 29 PRO 29 99 99 PRO PRO A . n A 1 30 ASP 30 100 100 ASP ASP A . n A 1 31 CYS 31 101 101 CYS CYS A . n A 1 32 ARG 32 102 102 ARG ARG A . n A 1 33 PRO 33 103 103 PRO PRO A . n A 1 34 LEU 34 104 104 LEU LEU A . n A 1 35 THR 35 105 105 THR THR A . n A 1 36 VAL 36 106 106 VAL VAL A . n A 1 37 LEU 37 107 107 LEU LEU A . n A 1 38 CYS 38 108 108 CYS CYS A . n A 1 39 ASP 39 109 109 ASP ASP A . n A 1 40 MET 40 110 110 MET MET A . n A 1 41 ASP 41 111 111 ASP ASP A . n A 1 42 THR 42 112 112 THR THR A . n A 1 43 ASP 43 113 113 ASP ASP A . n A 1 44 GLY 44 114 114 GLY GLY A . n A 1 45 GLY 45 115 115 GLY GLY A . n A 1 46 GLY 46 116 116 GLY GLY A . n A 1 47 TRP 47 117 117 TRP TRP A . n A 1 48 THR 48 118 118 THR THR A . n A 1 49 VAL 49 119 119 VAL VAL A . n A 1 50 PHE 50 120 120 PHE PHE A . n A 1 51 GLN 51 121 121 GLN GLN A . n A 1 52 ARG 52 122 122 ARG ARG A . n A 1 53 ARG 53 123 123 ARG ARG A . n A 1 54 VAL 54 124 124 VAL VAL A . n A 1 55 ASP 55 125 125 ASP ASP A . n A 1 56 GLY 56 126 126 GLY GLY A . n A 1 57 SER 57 127 127 SER SER A . n A 1 58 VAL 58 128 128 VAL VAL A . n A 1 59 ASP 59 129 129 ASP ASP A . n A 1 60 PHE 60 130 130 PHE PHE A . n A 1 61 TYR 61 131 131 TYR TYR A . n A 1 62 ARG 62 132 132 ARG ARG A . n A 1 63 ASP 63 133 133 ASP ASP A . n A 1 64 TRP 64 134 134 TRP TRP A . n A 1 65 ALA 65 135 135 ALA ALA A . n A 1 66 THR 66 136 136 THR THR A . n A 1 67 TYR 67 137 137 TYR TYR A . n A 1 68 LYS 68 138 138 LYS LYS A . n A 1 69 GLN 69 139 139 GLN GLN A . n A 1 70 GLY 70 140 140 GLY GLY A . n A 1 71 PHE 71 141 141 PHE PHE A . n A 1 72 GLY 72 142 142 GLY GLY A . n A 1 73 SER 73 143 143 SER SER A . n A 1 74 ARG 74 144 144 ARG ARG A . n A 1 75 LEU 75 145 145 LEU LEU A . n A 1 76 GLY 76 146 146 GLY GLY A . n A 1 77 GLU 77 147 147 GLU GLU A . n A 1 78 PHE 78 148 148 PHE PHE A . n A 1 79 TRP 79 149 149 TRP TRP A . n A 1 80 LEU 80 150 150 LEU LEU A . n A 1 81 GLY 81 151 151 GLY GLY A . n A 1 82 ASN 82 152 152 ASN ASN A . n A 1 83 ASP 83 153 153 ASP ASP A . n A 1 84 ASN 84 154 154 ASN ASN A . n A 1 85 ILE 85 155 155 ILE ILE A . n A 1 86 HIS 86 156 156 HIS HIS A . n A 1 87 ALA 87 157 157 ALA ALA A . n A 1 88 LEU 88 158 158 LEU LEU A . n A 1 89 THR 89 159 159 THR THR A . n A 1 90 ALA 90 160 160 ALA ALA A . n A 1 91 GLN 91 161 161 GLN GLN A . n A 1 92 GLY 92 162 162 GLY GLY A . n A 1 93 THR 93 163 163 THR THR A . n A 1 94 SER 94 164 164 SER SER A . n A 1 95 GLU 95 165 165 GLU GLU A . n A 1 96 LEU 96 166 166 LEU LEU A . n A 1 97 ARG 97 167 167 ARG ARG A . n A 1 98 THR 98 168 168 THR THR A . n A 1 99 ASP 99 169 169 ASP ASP A . n A 1 100 LEU 100 170 170 LEU LEU A . n A 1 101 VAL 101 171 171 VAL VAL A . n A 1 102 ASP 102 172 172 ASP ASP A . n A 1 103 PHE 103 173 173 PHE PHE A . n A 1 104 GLU 104 174 174 GLU GLU A . n A 1 105 ASP 105 175 175 ASP ASP A . n A 1 106 ASN 106 176 176 ASN ASN A . n A 1 107 TYR 107 177 177 TYR TYR A . n A 1 108 GLN 108 178 178 GLN GLN A . n A 1 109 PHE 109 179 179 PHE PHE A . n A 1 110 ALA 110 180 180 ALA ALA A . n A 1 111 LYS 111 181 181 LYS LYS A . n A 1 112 TYR 112 182 182 TYR TYR A . n A 1 113 ARG 113 183 183 ARG ARG A . n A 1 114 SER 114 184 184 SER SER A . n A 1 115 PHE 115 185 185 PHE PHE A . n A 1 116 ARG 116 186 186 ARG ARG A . n A 1 117 VAL 117 187 187 VAL VAL A . n A 1 118 ALA 118 188 188 ALA ALA A . n A 1 119 ASP 119 189 189 ASP ASP A . n A 1 120 GLU 120 190 190 GLU GLU A . n A 1 121 ALA 121 191 191 ALA ALA A . n A 1 122 GLU 122 192 192 GLU GLU A . n A 1 123 LYS 123 193 193 LYS LYS A . n A 1 124 TYR 124 194 194 TYR TYR A . n A 1 125 ASN 125 195 195 ASN ASN A . n A 1 126 LEU 126 196 196 LEU LEU A . n A 1 127 VAL 127 197 197 VAL VAL A . n A 1 128 LEU 128 198 198 LEU LEU A . n A 1 129 GLY 129 199 199 GLY GLY A . n A 1 130 ALA 130 200 200 ALA ALA A . n A 1 131 PHE 131 201 201 PHE PHE A . n A 1 132 VAL 132 202 202 VAL VAL A . n A 1 133 GLU 133 203 203 GLU GLU A . n A 1 134 GLY 134 204 204 GLY GLY A . n A 1 135 SER 135 205 205 SER SER A . n A 1 136 ALA 136 206 206 ALA ALA A . n A 1 137 GLY 137 207 207 GLY GLY A . n A 1 138 ASP 138 208 208 ASP ASP A . n A 1 139 SER 139 209 209 SER SER A . n A 1 140 LEU 140 210 210 LEU LEU A . n A 1 141 THR 141 211 211 THR THR A . n A 1 142 PHE 142 212 212 PHE PHE A . n A 1 143 HIS 143 213 213 HIS HIS A . n A 1 144 ASN 144 214 214 ASN ASN A . n A 1 145 ASN 145 215 215 ASN ASN A . n A 1 146 GLN 146 216 216 GLN GLN A . n A 1 147 SER 147 217 217 SER SER A . n A 1 148 PHE 148 218 218 PHE PHE A . n A 1 149 SER 149 219 219 SER SER A . n A 1 150 THR 150 220 220 THR THR A . n A 1 151 LYS 151 221 221 LYS LYS A . n A 1 152 ASP 152 222 222 ASP ASP A . n A 1 153 GLN 153 223 223 GLN GLN A . n A 1 154 ASP 154 224 224 ASP ASP A . n A 1 155 ASN 155 225 225 ASN ASN A . n A 1 156 ASP 156 226 226 ASP ASP A . n A 1 157 LEU 157 227 227 LEU LEU A . n A 1 158 ASN 158 228 228 ASN ASN A . n A 1 159 THR 159 229 229 THR THR A . n A 1 160 GLY 160 230 230 GLY GLY A . n A 1 161 ASN 161 231 231 ASN ASN A . n A 1 162 CYS 162 232 232 CYS CYS A . n A 1 163 ALA 163 233 233 ALA ALA A . n A 1 164 VAL 164 234 234 VAL VAL A . n A 1 165 MET 165 235 235 MET MET A . n A 1 166 PHE 166 236 236 PHE PHE A . n A 1 167 GLN 167 237 237 GLN GLN A . n A 1 168 GLY 168 238 238 GLY GLY A . n A 1 169 ALA 169 239 239 ALA ALA A . n A 1 170 TRP 170 240 240 TRP TRP A . n A 1 171 TRP 171 241 241 TRP TRP A . n A 1 172 TYR 172 242 242 TYR TYR A . n A 1 173 LYS 173 243 243 LYS LYS A . n A 1 174 ASN 174 244 244 ASN ASN A . n A 1 175 CYS 175 245 245 CYS CYS A . n A 1 176 HIS 176 246 246 HIS HIS A . n A 1 177 THR 177 247 247 THR THR A . n A 1 178 SER 178 248 248 SER SER A . n A 1 179 ASN 179 249 249 ASN ASN A . n A 1 180 LEU 180 250 250 LEU LEU A . n A 1 181 ASN 181 251 251 ASN ASN A . n A 1 182 GLY 182 252 252 GLY GLY A . n A 1 183 ARG 183 253 253 ARG ARG A . n A 1 184 TYR 184 254 254 TYR TYR A . n A 1 185 LEU 185 255 255 LEU LEU A . n A 1 186 ARG 186 256 256 ARG ARG A . n A 1 187 GLY 187 257 257 GLY GLY A . n A 1 188 THR 188 258 258 THR THR A . n A 1 189 HIS 189 259 259 HIS HIS A . n A 1 190 GLY 190 260 260 GLY GLY A . n A 1 191 SER 191 261 261 SER SER A . n A 1 192 PHE 192 262 262 PHE PHE A . n A 1 193 ALA 193 263 263 ALA ALA A . n A 1 194 ASN 194 264 264 ASN ASN A . n A 1 195 GLY 195 265 265 GLY GLY A . n A 1 196 ILE 196 266 266 ILE ILE A . n A 1 197 ASN 197 267 267 ASN ASN A . n A 1 198 TRP 198 268 268 TRP TRP A . n A 1 199 LYS 199 269 269 LYS LYS A . n A 1 200 SER 200 270 270 SER SER A . n A 1 201 GLY 201 271 271 GLY GLY A . n A 1 202 LYS 202 272 272 LYS LYS A . n A 1 203 GLY 203 273 273 GLY GLY A . n A 1 204 TYR 204 274 274 TYR TYR A . n A 1 205 ASN 205 275 275 ASN ASN A . n A 1 206 TYR 206 276 276 TYR TYR A . n A 1 207 SER 207 277 277 SER SER A . n A 1 208 TYR 208 278 278 TYR TYR A . n A 1 209 LYS 209 279 279 LYS LYS A . n A 1 210 VAL 210 280 280 VAL VAL A . n A 1 211 SER 211 281 281 SER SER A . n A 1 212 GLU 212 282 282 GLU GLU A . n A 1 213 MET 213 283 283 MET MET A . n A 1 214 LYS 214 284 284 LYS LYS A . n A 1 215 VAL 215 285 285 VAL VAL A . n A 1 216 ARG 216 286 286 ARG ARG A . n A 1 217 PRO 217 287 287 PRO PRO A . n A 1 218 ALA 218 288 288 ALA ALA A . n B 2 1 ASN 1 71 ? ? ? B . n B 2 2 PRO 2 72 ? ? ? B . n B 2 3 CYS 3 73 73 CYS CYS B . n B 2 4 LEU 4 74 74 LEU LEU B . n B 2 5 THR 5 75 75 THR THR B . n B 2 6 GLY 6 76 76 GLY GLY B . n B 2 7 PRO 7 77 77 PRO PRO B . n B 2 8 ARG 8 78 78 ARG ARG B . n B 2 9 THR 9 79 79 THR THR B . n B 2 10 CYS 10 80 80 CYS CYS B . n B 2 11 LYS 11 81 81 LYS LYS B . n B 2 12 ASP 12 82 82 ASP ASP B . n B 2 13 LEU 13 83 83 LEU LEU B . n B 2 14 LEU 14 84 84 LEU LEU B . n B 2 15 ASP 15 85 85 ASP ASP B . n B 2 16 ARG 16 86 86 ARG ARG B . n B 2 17 GLY 17 87 87 GLY GLY B . n B 2 18 HIS 18 88 88 HIS HIS B . n B 2 19 PHE 19 89 89 PHE PHE B . n B 2 20 LEU 20 90 90 LEU LEU B . n B 2 21 SER 21 91 91 SER SER B . n B 2 22 GLY 22 92 92 GLY GLY B . n B 2 23 TRP 23 93 93 TRP TRP B . n B 2 24 HIS 24 94 94 HIS HIS B . n B 2 25 THR 25 95 95 THR THR B . n B 2 26 ILE 26 96 96 ILE ILE B . n B 2 27 TYR 27 97 97 TYR TYR B . n B 2 28 LEU 28 98 98 LEU LEU B . n B 2 29 PRO 29 99 99 PRO PRO B . n B 2 30 ASP 30 100 100 ASP ASP B . n B 2 31 CYS 31 101 101 CYS CYS B . n B 2 32 ARG 32 102 102 ARG ARG B . n B 2 33 PRO 33 103 103 PRO PRO B . n B 2 34 LEU 34 104 104 LEU LEU B . n B 2 35 THR 35 105 105 THR THR B . n B 2 36 VAL 36 106 106 VAL VAL B . n B 2 37 LEU 37 107 107 LEU LEU B . n B 2 38 CYS 38 108 108 CYS CYS B . n B 2 39 ASP 39 109 109 ASP ASP B . n B 2 40 MET 40 110 110 MET MET B . n B 2 41 ASP 41 111 111 ASP ASP B . n B 2 42 THR 42 112 112 THR THR B . n B 2 43 ASP 43 113 113 ASP ASP B . n B 2 44 GLY 44 114 114 GLY GLY B . n B 2 45 GLY 45 115 115 GLY GLY B . n B 2 46 GLY 46 116 116 GLY GLY B . n B 2 47 TRP 47 117 117 TRP TRP B . n B 2 48 THR 48 118 118 THR THR B . n B 2 49 VAL 49 119 119 VAL VAL B . n B 2 50 PHE 50 120 120 PHE PHE B . n B 2 51 GLN 51 121 121 GLN GLN B . n B 2 52 ARG 52 122 122 ARG ARG B . n B 2 53 ARG 53 123 123 ARG ARG B . n B 2 54 VAL 54 124 124 VAL VAL B . n B 2 55 ASP 55 125 125 ASP ASP B . n B 2 56 GLY 56 126 126 GLY GLY B . n B 2 57 SER 57 127 127 SER SER B . n B 2 58 VAL 58 128 128 VAL VAL B . n B 2 59 ASP 59 129 129 ASP ASP B . n B 2 60 PHE 60 130 130 PHE PHE B . n B 2 61 TYR 61 131 131 TYR TYR B . n B 2 62 ARG 62 132 132 ARG ARG B . n B 2 63 ASP 63 133 133 ASP ASP B . n B 2 64 TRP 64 134 134 TRP TRP B . n B 2 65 ALA 65 135 135 ALA ALA B . n B 2 66 THR 66 136 136 THR THR B . n B 2 67 TYR 67 137 137 TYR TYR B . n B 2 68 LYS 68 138 138 LYS LYS B . n B 2 69 GLN 69 139 139 GLN GLN B . n B 2 70 GLY 70 140 140 GLY GLY B . n B 2 71 PHE 71 141 141 PHE PHE B . n B 2 72 GLY 72 142 142 GLY GLY B . n B 2 73 SER 73 143 143 SER SER B . n B 2 74 ARG 74 144 144 ARG ARG B . n B 2 75 LEU 75 145 145 LEU LEU B . n B 2 76 GLY 76 146 146 GLY GLY B . n B 2 77 GLU 77 147 147 GLU GLU B . n B 2 78 PHE 78 148 148 PHE PHE B . n B 2 79 TRP 79 149 149 TRP TRP B . n B 2 80 LEU 80 150 150 LEU LEU B . n B 2 81 GLY 81 151 151 GLY GLY B . n B 2 82 ASN 82 152 152 ASN ASN B . n B 2 83 ASP 83 153 153 ASP ASP B . n B 2 84 ASN 84 154 154 ASN ASN B . n B 2 85 ILE 85 155 155 ILE ILE B . n B 2 86 HIS 86 156 156 HIS HIS B . n B 2 87 ALA 87 157 157 ALA ALA B . n B 2 88 LEU 88 158 158 LEU LEU B . n B 2 89 THR 89 159 159 THR THR B . n B 2 90 ALA 90 160 160 ALA ALA B . n B 2 91 GLN 91 161 161 GLN GLN B . n B 2 92 GLY 92 162 162 GLY GLY B . n B 2 93 THR 93 163 163 THR THR B . n B 2 94 SER 94 164 164 SER SER B . n B 2 95 GLU 95 165 165 GLU GLU B . n B 2 96 LEU 96 166 166 LEU LEU B . n B 2 97 ARG 97 167 167 ARG ARG B . n B 2 98 THR 98 168 168 THR THR B . n B 2 99 ASP 99 169 169 ASP ASP B . n B 2 100 LEU 100 170 170 LEU LEU B . n B 2 101 VAL 101 171 171 VAL VAL B . n B 2 102 ASP 102 172 172 ASP ASP B . n B 2 103 PHE 103 173 173 PHE PHE B . n B 2 104 GLU 104 174 174 GLU GLU B . n B 2 105 ASP 105 175 175 ASP ASP B . n B 2 106 ASN 106 176 176 ASN ASN B . n B 2 107 TYR 107 177 177 TYR TYR B . n B 2 108 GLN 108 178 178 GLN GLN B . n B 2 109 PHE 109 179 179 PHE PHE B . n B 2 110 ALA 110 180 180 ALA ALA B . n B 2 111 LYS 111 181 181 LYS LYS B . n B 2 112 TYR 112 182 182 TYR TYR B . n B 2 113 ARG 113 183 183 ARG ARG B . n B 2 114 SER 114 184 184 SER SER B . n B 2 115 PHE 115 185 185 PHE PHE B . n B 2 116 LYS 116 186 186 LYS LYS B . n B 2 117 VAL 117 187 187 VAL VAL B . n B 2 118 ALA 118 188 188 ALA ALA B . n B 2 119 ASP 119 189 189 ASP ASP B . n B 2 120 GLU 120 190 190 GLU GLU B . n B 2 121 ALA 121 191 191 ALA ALA B . n B 2 122 GLU 122 192 192 GLU GLU B . n B 2 123 LYS 123 193 193 LYS LYS B . n B 2 124 TYR 124 194 194 TYR TYR B . n B 2 125 ASN 125 195 195 ASN ASN B . n B 2 126 LEU 126 196 196 LEU LEU B . n B 2 127 VAL 127 197 197 VAL VAL B . n B 2 128 LEU 128 198 198 LEU LEU B . n B 2 129 GLY 129 199 199 GLY GLY B . n B 2 130 ALA 130 200 200 ALA ALA B . n B 2 131 PHE 131 201 201 PHE PHE B . n B 2 132 VAL 132 202 202 VAL VAL B . n B 2 133 GLU 133 203 203 GLU GLU B . n B 2 134 GLY 134 204 204 GLY GLY B . n B 2 135 SER 135 205 205 SER SER B . n B 2 136 ALA 136 206 206 ALA ALA B . n B 2 137 GLY 137 207 207 GLY GLY B . n B 2 138 ASP 138 208 208 ASP ASP B . n B 2 139 SER 139 209 209 SER SER B . n B 2 140 LEU 140 210 210 LEU LEU B . n B 2 141 THR 141 211 211 THR THR B . n B 2 142 PHE 142 212 212 PHE PHE B . n B 2 143 HIS 143 213 213 HIS HIS B . n B 2 144 ASN 144 214 214 ASN ASN B . n B 2 145 ASN 145 215 215 ASN ASN B . n B 2 146 GLN 146 216 216 GLN GLN B . n B 2 147 SER 147 217 217 SER SER B . n B 2 148 PHE 148 218 218 PHE PHE B . n B 2 149 SER 149 219 219 SER SER B . n B 2 150 THR 150 220 220 THR THR B . n B 2 151 LYS 151 221 221 LYS LYS B . n B 2 152 ASP 152 222 222 ASP ASP B . n B 2 153 GLN 153 223 223 GLN GLN B . n B 2 154 ASP 154 224 224 ASP ASP B . n B 2 155 ASN 155 225 225 ASN ASN B . n B 2 156 ASP 156 226 226 ASP ASP B . n B 2 157 LEU 157 227 227 LEU LEU B . n B 2 158 ASN 158 228 228 ASN ASN B . n B 2 159 THR 159 229 229 THR THR B . n B 2 160 GLY 160 230 230 GLY GLY B . n B 2 161 ASN 161 231 231 ASN ASN B . n B 2 162 CYS 162 232 232 CYS CYS B . n B 2 163 ALA 163 233 233 ALA ALA B . n B 2 164 VAL 164 234 234 VAL VAL B . n B 2 165 MET 165 235 235 MET MET B . n B 2 166 PHE 166 236 236 PHE PHE B . n B 2 167 GLN 167 237 237 GLN GLN B . n B 2 168 GLY 168 238 238 GLY GLY B . n B 2 169 ALA 169 239 239 ALA ALA B . n B 2 170 TRP 170 240 240 TRP TRP B . n B 2 171 TRP 171 241 241 TRP TRP B . n B 2 172 TYR 172 242 242 TYR TYR B . n B 2 173 LYS 173 243 243 LYS LYS B . n B 2 174 ASN 174 244 244 ASN ASN B . n B 2 175 CYS 175 245 245 CYS CYS B . n B 2 176 HIS 176 246 246 HIS HIS B . n B 2 177 THR 177 247 247 THR THR B . n B 2 178 SER 178 248 248 SER SER B . n B 2 179 ASN 179 249 249 ASN ASN B . n B 2 180 LEU 180 250 250 LEU LEU B . n B 2 181 ASN 181 251 251 ASN ASN B . n B 2 182 GLY 182 252 252 GLY GLY B . n B 2 183 ARG 183 253 253 ARG ARG B . n B 2 184 TYR 184 254 254 TYR TYR B . n B 2 185 LEU 185 255 255 LEU LEU B . n B 2 186 ARG 186 256 256 ARG ARG B . n B 2 187 GLY 187 257 257 GLY GLY B . n B 2 188 THR 188 258 258 THR THR B . n B 2 189 HIS 189 259 259 HIS HIS B . n B 2 190 GLY 190 260 260 GLY GLY B . n B 2 191 SER 191 261 261 SER SER B . n B 2 192 PHE 192 262 262 PHE PHE B . n B 2 193 ALA 193 263 263 ALA ALA B . n B 2 194 ASN 194 264 264 ASN ASN B . n B 2 195 GLY 195 265 265 GLY GLY B . n B 2 196 ILE 196 266 266 ILE ILE B . n B 2 197 ASN 197 267 267 ASN ASN B . n B 2 198 TRP 198 268 268 TRP TRP B . n B 2 199 LYS 199 269 269 LYS LYS B . n B 2 200 SER 200 270 270 SER SER B . n B 2 201 GLY 201 271 271 GLY GLY B . n B 2 202 LYS 202 272 272 LYS LYS B . n B 2 203 GLY 203 273 273 GLY GLY B . n B 2 204 TYR 204 274 274 TYR TYR B . n B 2 205 ASN 205 275 275 ASN ASN B . n B 2 206 TYR 206 276 276 TYR TYR B . n B 2 207 SER 207 277 277 SER SER B . n B 2 208 TYR 208 278 278 TYR TYR B . n B 2 209 LYS 209 279 279 LYS LYS B . n B 2 210 VAL 210 280 280 VAL VAL B . n B 2 211 SER 211 281 281 SER SER B . n B 2 212 GLU 212 282 282 GLU GLU B . n B 2 213 MET 213 283 283 MET MET B . n B 2 214 LYS 214 284 284 LYS LYS B . n B 2 215 VAL 215 285 285 VAL VAL B . n B 2 216 ARG 216 286 286 ARG ARG B . n B 2 217 PRO 217 287 287 PRO PRO B . n B 2 218 ALA 218 288 288 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 1289 1289 CA CA A . D 4 NAG 1 1290 1290 NAG NAG A . E 3 CA 1 1289 1289 CA CA B . F 5 HOH 1 2001 2001 HOH HOH A . F 5 HOH 2 2002 2002 HOH HOH A . F 5 HOH 3 2003 2003 HOH HOH A . F 5 HOH 4 2004 2004 HOH HOH A . F 5 HOH 5 2005 2005 HOH HOH A . F 5 HOH 6 2006 2006 HOH HOH A . F 5 HOH 7 2007 2007 HOH HOH A . F 5 HOH 8 2008 2008 HOH HOH A . F 5 HOH 9 2009 2009 HOH HOH A . F 5 HOH 10 2010 2010 HOH HOH A . F 5 HOH 11 2011 2011 HOH HOH A . F 5 HOH 12 2012 2012 HOH HOH A . F 5 HOH 13 2013 2013 HOH HOH A . F 5 HOH 14 2014 2014 HOH HOH A . F 5 HOH 15 2015 2015 HOH HOH A . F 5 HOH 16 2016 2016 HOH HOH A . F 5 HOH 17 2017 2017 HOH HOH A . F 5 HOH 18 2018 2018 HOH HOH A . F 5 HOH 19 2019 2019 HOH HOH A . F 5 HOH 20 2020 2020 HOH HOH A . F 5 HOH 21 2021 2021 HOH HOH A . F 5 HOH 22 2022 2022 HOH HOH A . F 5 HOH 23 2023 2023 HOH HOH A . F 5 HOH 24 2024 2024 HOH HOH A . F 5 HOH 25 2025 2025 HOH HOH A . F 5 HOH 26 2026 2026 HOH HOH A . F 5 HOH 27 2027 2027 HOH HOH A . F 5 HOH 28 2028 2028 HOH HOH A . F 5 HOH 29 2029 2029 HOH HOH A . G 5 HOH 1 2001 2001 HOH HOH B . G 5 HOH 2 2002 2002 HOH HOH B . G 5 HOH 3 2003 2003 HOH HOH B . G 5 HOH 4 2004 2004 HOH HOH B . G 5 HOH 5 2005 2005 HOH HOH B . G 5 HOH 6 2006 2006 HOH HOH B . G 5 HOH 7 2007 2007 HOH HOH B . G 5 HOH 8 2008 2008 HOH HOH B . G 5 HOH 9 2009 2009 HOH HOH B . G 5 HOH 10 2010 2010 HOH HOH B . G 5 HOH 11 2011 2011 HOH HOH B . G 5 HOH 12 2012 2012 HOH HOH B . G 5 HOH 13 2013 2013 HOH HOH B . G 5 HOH 14 2014 2014 HOH HOH B . G 5 HOH 15 2015 2015 HOH HOH B . G 5 HOH 16 2016 2016 HOH HOH B . G 5 HOH 17 2017 2017 HOH HOH B . G 5 HOH 18 2018 2018 HOH HOH B . G 5 HOH 19 2019 2019 HOH HOH B . G 5 HOH 20 2020 2020 HOH HOH B . G 5 HOH 21 2021 2021 HOH HOH B . G 5 HOH 22 2022 2022 HOH HOH B . G 5 HOH 23 2023 2023 HOH HOH B . G 5 HOH 24 2024 2024 HOH HOH B . G 5 HOH 25 2025 2025 HOH HOH B . G 5 HOH 26 2026 2026 HOH HOH B . G 5 HOH 27 2027 2027 HOH HOH B . G 5 HOH 28 2028 2028 HOH HOH B . G 5 HOH 29 2029 2029 HOH HOH B . G 5 HOH 30 2030 2030 HOH HOH B . G 5 HOH 31 2031 2031 HOH HOH B . G 5 HOH 32 2032 2032 HOH HOH B . G 5 HOH 33 2033 2033 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,F 2 1 B,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2013 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD1 ? A ASP 154 ? A ASP 224 ? 1_555 50.8 ? 2 OD2 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A ASP 156 ? A ASP 226 ? 1_555 120.3 ? 3 OD1 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A ASP 156 ? A ASP 226 ? 1_555 75.7 ? 4 OD2 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD2 ? A ASP 156 ? A ASP 226 ? 1_555 134.6 ? 5 OD1 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD2 ? A ASP 156 ? A ASP 226 ? 1_555 92.4 ? 6 O ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD2 ? A ASP 156 ? A ASP 226 ? 1_555 59.3 ? 7 OD2 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD1 ? A ASP 156 ? A ASP 226 ? 1_555 97.5 ? 8 OD1 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD1 ? A ASP 156 ? A ASP 226 ? 1_555 71.5 ? 9 O ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD1 ? A ASP 156 ? A ASP 226 ? 1_555 87.0 ? 10 OD2 ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 OD1 ? A ASP 156 ? A ASP 226 ? 1_555 39.5 ? 11 OD2 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A ASN 158 ? A ASN 228 ? 1_555 155.6 ? 12 OD1 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A ASN 158 ? A ASN 228 ? 1_555 153.3 ? 13 O ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A ASN 158 ? A ASN 228 ? 1_555 79.6 ? 14 OD2 ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A ASN 158 ? A ASN 228 ? 1_555 66.1 ? 15 OD1 ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A ASN 158 ? A ASN 228 ? 1_555 97.5 ? 16 OD2 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A GLY 160 ? A GLY 230 ? 1_555 102.6 ? 17 OD1 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A GLY 160 ? A GLY 230 ? 1_555 126.2 ? 18 O ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A GLY 160 ? A GLY 230 ? 1_555 132.6 ? 19 OD2 ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A GLY 160 ? A GLY 230 ? 1_555 76.8 ? 20 OD1 ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A GLY 160 ? A GLY 230 ? 1_555 67.1 ? 21 O ? A ASN 158 ? A ASN 228 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? A GLY 160 ? A GLY 230 ? 1_555 66.3 ? 22 OD2 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 80.6 ? 23 OD1 ? A ASP 154 ? A ASP 224 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 60.6 ? 24 O ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 47.6 ? 25 OD2 ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 105.5 ? 26 OD1 ? A ASP 156 ? A ASP 226 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 118.9 ? 27 O ? A ASN 158 ? A ASN 228 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 108.4 ? 28 O ? A GLY 160 ? A GLY 230 ? 1_555 CA ? C CA . ? A CA 1289 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 173.1 ? 29 OD2 ? B ASP 154 ? B ASP 224 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 OD1 ? B ASP 154 ? B ASP 224 ? 1_555 40.8 ? 30 OD2 ? B ASP 154 ? B ASP 224 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 OD2 ? B ASP 156 ? B ASP 226 ? 1_555 68.7 ? 31 OD1 ? B ASP 154 ? B ASP 224 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 OD2 ? B ASP 156 ? B ASP 226 ? 1_555 59.3 ? 32 OD2 ? B ASP 154 ? B ASP 224 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 O ? B ASN 158 ? B ASN 228 ? 1_555 83.4 ? 33 OD1 ? B ASP 154 ? B ASP 224 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 O ? B ASN 158 ? B ASN 228 ? 1_555 104.6 ? 34 OD2 ? B ASP 156 ? B ASP 226 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 O ? B ASN 158 ? B ASN 228 ? 1_555 54.4 ? 35 OD2 ? B ASP 154 ? B ASP 224 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 O ? G HOH . ? B HOH 2024 ? 1_555 51.2 ? 36 OD1 ? B ASP 154 ? B ASP 224 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 O ? G HOH . ? B HOH 2024 ? 1_555 91.7 ? 37 OD2 ? B ASP 156 ? B ASP 226 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 O ? G HOH . ? B HOH 2024 ? 1_555 88.0 ? 38 O ? B ASN 158 ? B ASN 228 ? 1_555 CA ? E CA . ? B CA 1289 ? 1_555 O ? G HOH . ? B HOH 2024 ? 1_555 56.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-23 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-04-03 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2023-12-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 4 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Database references' 13 6 'Structure model' 'Refinement description' 14 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_src_gen 2 4 'Structure model' pdbx_database_proc 3 4 'Structure model' pdbx_database_status 4 4 'Structure model' struct_conn 5 5 'Structure model' chem_comp 6 5 'Structure model' entity 7 5 'Structure model' pdbx_chem_comp_identifier 8 5 'Structure model' pdbx_database_status 9 5 'Structure model' pdbx_entity_nonpoly 10 5 'Structure model' pdbx_struct_conn_angle 11 5 'Structure model' struct_conn 12 5 'Structure model' struct_site 13 5 'Structure model' struct_site_gen 14 6 'Structure model' chem_comp 15 6 'Structure model' chem_comp_atom 16 6 'Structure model' chem_comp_bond 17 6 'Structure model' database_2 18 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 2 4 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_chem_comp.name' 5 5 'Structure model' '_chem_comp.type' 6 5 'Structure model' '_entity.pdbx_description' 7 5 'Structure model' '_pdbx_database_status.status_code_sf' 8 5 'Structure model' '_pdbx_entity_nonpoly.name' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.value' 22 5 'Structure model' '_struct_conn.pdbx_dist_value' 23 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 6 'Structure model' '_chem_comp.pdbx_synonyms' 36 6 'Structure model' '_database_2.pdbx_DOI' 37 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _pdbx_entry_details.entry_id 2J61 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;DOMAINE C TERMINAL DIFFERENCE BETWEEN UNP SEQUENCE AND THE PROTEIN CRYSTALLIZED BECAUSE IT EXISTS POINTS OF POLYMORPHISME IN L FICOLIN. THE CDNA USED CORRESPONDS TO ONE REPANDED ALLELE AND THE SEQUENCE IN UNP TO AN OTHER ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 169 ? ? OH A TYR 177 ? A 1.88 2 1 O B HIS 259 ? ? OD1 B ASN 275 ? ? 1.95 3 1 OD2 A ASP 208 ? ? OG1 A THR 211 ? ? 2.00 4 1 O B SER 209 ? ? OG B SER 248 ? ? 2.12 5 1 OD1 A ASP 172 ? ? N A GLU 174 ? ? 2.13 6 1 O B ASN 214 ? ? NZ B LYS 243 ? ? 2.13 7 1 O A HIS 259 ? ? OD1 A ASN 275 ? ? 2.14 8 1 O B GLY 199 ? ? O B HOH 2020 ? ? 2.15 9 1 O B LEU 227 ? ? ND2 B ASN 244 ? ? 2.15 10 1 ND1 A HIS 213 ? ? O A TRP 241 ? ? 2.17 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE1 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PHE _pdbx_validate_rmsd_bond.auth_seq_id_1 141 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CZ _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 PHE _pdbx_validate_rmsd_bond.auth_seq_id_2 141 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.500 _pdbx_validate_rmsd_bond.bond_target_value 1.369 _pdbx_validate_rmsd_bond.bond_deviation 0.131 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 107 ? ? CB A LEU 107 ? ? CG A LEU 107 ? ? 129.45 115.30 14.15 2.30 N 2 1 CB A ASP 109 ? ? CG A ASP 109 ? ? OD2 A ASP 109 ? ? 126.81 118.30 8.51 0.90 N 3 1 CB A ASP 113 ? ? CG A ASP 113 ? ? OD2 A ASP 113 ? ? 125.23 118.30 6.93 0.90 N 4 1 CB A ASP 169 ? ? CG A ASP 169 ? ? OD2 A ASP 169 ? ? 125.26 118.30 6.96 0.90 N 5 1 CB A ASP 175 ? ? CG A ASP 175 ? ? OD2 A ASP 175 ? ? 125.91 118.30 7.61 0.90 N 6 1 CB B ASP 100 ? ? CG B ASP 100 ? ? OD2 B ASP 100 ? ? 123.94 118.30 5.64 0.90 N 7 1 CB B ASP 109 ? ? CG B ASP 109 ? ? OD2 B ASP 109 ? ? 124.37 118.30 6.07 0.90 N 8 1 CB B ASP 125 ? ? CG B ASP 125 ? ? OD2 B ASP 125 ? ? 123.87 118.30 5.57 0.90 N 9 1 CB B ASP 129 ? ? CG B ASP 129 ? ? OD2 B ASP 129 ? ? 124.56 118.30 6.26 0.90 N 10 1 CB B ASP 133 ? ? CG B ASP 133 ? ? OD2 B ASP 133 ? ? 124.94 118.30 6.64 0.90 N 11 1 CB B ASP 208 ? ? CG B ASP 208 ? ? OD2 B ASP 208 ? ? 123.89 118.30 5.59 0.90 N 12 1 CB B ASP 222 ? ? CG B ASP 222 ? ? OD2 B ASP 222 ? ? 124.81 118.30 6.51 0.90 N 13 1 CB B ASP 224 ? ? CG B ASP 224 ? ? OD2 B ASP 224 ? ? 124.32 118.30 6.02 0.90 N 14 1 CB B ASP 226 ? ? CG B ASP 226 ? ? OD2 B ASP 226 ? ? 125.04 118.30 6.74 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 74 ? ? 73.69 -39.65 2 1 ASP A 100 ? ? -63.22 0.48 3 1 CYS A 101 ? ? 75.78 -6.41 4 1 ASP A 111 ? ? -132.99 -78.17 5 1 THR A 112 ? ? -39.81 126.31 6 1 VAL A 124 ? ? -166.51 -7.60 7 1 ASP A 125 ? ? -169.76 -7.51 8 1 ALA A 188 ? ? -43.14 150.20 9 1 GLU A 192 ? ? -74.71 28.44 10 1 GLU A 203 ? ? -179.47 -170.06 11 1 PHE A 212 ? ? -37.50 -34.90 12 1 SER A 217 ? ? -43.92 169.89 13 1 LYS A 221 ? ? -52.99 -8.55 14 1 GLN A 237 ? ? 69.13 62.75 15 1 TRP A 240 ? ? 178.89 175.96 16 1 LYS A 243 ? ? -82.06 -92.51 17 1 ASN A 244 ? ? -153.37 64.82 18 1 ASN A 249 ? ? -153.55 45.88 19 1 LYS A 272 ? ? -142.49 18.60 20 1 ASP B 100 ? ? -67.18 8.29 21 1 ASP B 111 ? ? -110.13 -73.81 22 1 THR B 112 ? ? -37.15 126.30 23 1 VAL B 124 ? ? -162.77 -14.18 24 1 ASP B 125 ? ? -152.65 -9.01 25 1 ALA B 180 ? ? -168.50 59.28 26 1 LYS B 186 ? ? -176.65 142.86 27 1 ALA B 188 ? ? -49.85 -173.42 28 1 GLU B 192 ? ? -64.42 16.08 29 1 SER B 209 ? ? -152.57 39.24 30 1 LEU B 210 ? ? -142.33 -32.74 31 1 ASN B 215 ? ? 42.70 26.49 32 1 LYS B 221 ? ? -63.76 1.11 33 1 ASP B 222 ? ? -145.20 27.51 34 1 GLN B 223 ? ? -151.66 68.32 35 1 LEU B 227 ? ? -74.99 26.41 36 1 THR B 229 ? ? -45.57 -18.16 37 1 LYS B 243 ? ? -86.74 -82.66 38 1 ASN B 244 ? ? -177.15 68.38 39 1 CYS B 245 ? ? -104.86 -83.27 40 1 ASN B 249 ? ? -142.39 50.55 41 1 ARG B 256 ? ? 78.43 75.63 42 1 HIS B 259 ? ? -171.36 133.27 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 PHE _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 236 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 237 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 146.52 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 71 ? A ASN 1 2 1 Y 1 A PRO 72 ? A PRO 2 3 1 Y 1 B ASN 71 ? B ASN 1 4 1 Y 1 B PRO 72 ? B PRO 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 NAG C1 C N R 251 NAG C2 C N R 252 NAG C3 C N R 253 NAG C4 C N S 254 NAG C5 C N R 255 NAG C6 C N N 256 NAG C7 C N N 257 NAG C8 C N N 258 NAG N2 N N N 259 NAG O1 O N N 260 NAG O3 O N N 261 NAG O4 O N N 262 NAG O5 O N N 263 NAG O6 O N N 264 NAG O7 O N N 265 NAG H1 H N N 266 NAG H2 H N N 267 NAG H3 H N N 268 NAG H4 H N N 269 NAG H5 H N N 270 NAG H61 H N N 271 NAG H62 H N N 272 NAG H81 H N N 273 NAG H82 H N N 274 NAG H83 H N N 275 NAG HN2 H N N 276 NAG HO1 H N N 277 NAG HO3 H N N 278 NAG HO4 H N N 279 NAG HO6 H N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PRO N N N N 304 PRO CA C N S 305 PRO C C N N 306 PRO O O N N 307 PRO CB C N N 308 PRO CG C N N 309 PRO CD C N N 310 PRO OXT O N N 311 PRO H H N N 312 PRO HA H N N 313 PRO HB2 H N N 314 PRO HB3 H N N 315 PRO HG2 H N N 316 PRO HG3 H N N 317 PRO HD2 H N N 318 PRO HD3 H N N 319 PRO HXT H N N 320 SER N N N N 321 SER CA C N S 322 SER C C N N 323 SER O O N N 324 SER CB C N N 325 SER OG O N N 326 SER OXT O N N 327 SER H H N N 328 SER H2 H N N 329 SER HA H N N 330 SER HB2 H N N 331 SER HB3 H N N 332 SER HG H N N 333 SER HXT H N N 334 THR N N N N 335 THR CA C N S 336 THR C C N N 337 THR O O N N 338 THR CB C N R 339 THR OG1 O N N 340 THR CG2 C N N 341 THR OXT O N N 342 THR H H N N 343 THR H2 H N N 344 THR HA H N N 345 THR HB H N N 346 THR HG1 H N N 347 THR HG21 H N N 348 THR HG22 H N N 349 THR HG23 H N N 350 THR HXT H N N 351 TRP N N N N 352 TRP CA C N S 353 TRP C C N N 354 TRP O O N N 355 TRP CB C N N 356 TRP CG C Y N 357 TRP CD1 C Y N 358 TRP CD2 C Y N 359 TRP NE1 N Y N 360 TRP CE2 C Y N 361 TRP CE3 C Y N 362 TRP CZ2 C Y N 363 TRP CZ3 C Y N 364 TRP CH2 C Y N 365 TRP OXT O N N 366 TRP H H N N 367 TRP H2 H N N 368 TRP HA H N N 369 TRP HB2 H N N 370 TRP HB3 H N N 371 TRP HD1 H N N 372 TRP HE1 H N N 373 TRP HE3 H N N 374 TRP HZ2 H N N 375 TRP HZ3 H N N 376 TRP HH2 H N N 377 TRP HXT H N N 378 TYR N N N N 379 TYR CA C N S 380 TYR C C N N 381 TYR O O N N 382 TYR CB C N N 383 TYR CG C Y N 384 TYR CD1 C Y N 385 TYR CD2 C Y N 386 TYR CE1 C Y N 387 TYR CE2 C Y N 388 TYR CZ C Y N 389 TYR OH O N N 390 TYR OXT O N N 391 TYR H H N N 392 TYR H2 H N N 393 TYR HA H N N 394 TYR HB2 H N N 395 TYR HB3 H N N 396 TYR HD1 H N N 397 TYR HD2 H N N 398 TYR HE1 H N N 399 TYR HE2 H N N 400 TYR HH H N N 401 TYR HXT H N N 402 VAL N N N N 403 VAL CA C N S 404 VAL C C N N 405 VAL O O N N 406 VAL CB C N N 407 VAL CG1 C N N 408 VAL CG2 C N N 409 VAL OXT O N N 410 VAL H H N N 411 VAL H2 H N N 412 VAL HA H N N 413 VAL HB H N N 414 VAL HG11 H N N 415 VAL HG12 H N N 416 VAL HG13 H N N 417 VAL HG21 H N N 418 VAL HG22 H N N 419 VAL HG23 H N N 420 VAL HXT H N N 421 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JC9 _pdbx_initial_refinement_model.details 'PDB ENTRY 1JC9' #