data_2JGW # _entry.id 2JGW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2JGW PDBE EBI-31484 WWPDB D_1290031484 BMRB 7420 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1FHC unspecified 'C3D AND HEPARIN BINDING COMPLEMENT FACTOR H DOMAINS SCR19-20' PDB 1HAQ unspecified 'FOUR MODELS OF HUMAN FACTOR H DETERMINED BY SOLUTION SCATTERING CURVE-FITTING AND HOMOLOGY MODELLING' PDB 1HCC unspecified . PDB 1HFH unspecified 'FACTOR H, 15TH AND 16TH C-MODULE PAIR ( NMR, MINIMIZED AVERAGED STRUCTURE)' PDB 1HFI unspecified 'FACTOR H, 15TH C-MODULE PAIR (NMR, MINIMIZED AVERAGED STRUCTURE)' PDB 1KOV unspecified 'HOMOLOGY MODEL OF HUMAN FACTOR H SCRS 6 AND 7' PDB 2BZM unspecified 'SOLUTION STRUCTURE OF THE PRIMARY HOST RECOGNITION REGION OF COMPLEMENT FACTOR H' PDB 2G7I unspecified 'STRUCTURE OF HUMAN COMPLEMENT FACTOR H CARBOXYL TERMINALDOMAINS 19-20: A BASIS FOR ATYPICAL HEMOLYTIC UREMICSYNDROME' PDB 2JGX unspecified 'STRUCTURE OF CCP MODULE 7 OF COMPLEMENT FACTOR H - THE AMD NOT AT RISK VARIENT (402Y)' BMRB 7420 unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2JGW _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-02-16 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Herbert, A.P.' 1 ? 'Deakin, J.A.' 2 ? 'Schmidt, C.Q.' 3 ? 'Blaum, B.S.' 4 ? 'Egan, C.' 5 ? 'Ferreira, V.P.' 6 ? 'Pangburn, M.K.' 7 ? 'Lyon, M.' 8 ? 'Uhrin, D.' 9 ? 'Barlow, P.N.' 10 ? # _citation.id primary _citation.title ;Structure shows that a glycosaminoglycan and protein recognition site in factor H is perturbed by age-related macular degeneration-linked single nucleotide polymorphism. ; _citation.journal_abbrev 'J. Biol. Chem.' _citation.journal_volume 282 _citation.page_first 18960 _citation.page_last 18968 _citation.year 2007 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17360715 _citation.pdbx_database_id_DOI 10.1074/jbc.M609636200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Herbert, A.P.' 1 primary 'Deakin, J.A.' 2 primary 'Schmidt, C.Q.' 3 primary 'Blaum, B.S.' 4 primary 'Egan, C.' 5 primary 'Ferreira, V.P.' 6 primary 'Pangburn, M.K.' 7 primary 'Lyon, M.' 8 primary 'Uhrin, D.' 9 primary 'Barlow, P.N.' 10 # _cell.entry_id 2JGW _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JGW _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'COMPLEMENT FACTOR H' _entity.formula_weight 6985.064 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CCP MODULE 7, RESIDUES 386-446' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'H FACTOR 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code LRKCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVK _entity_poly.pdbx_seq_one_letter_code_can LRKCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ARG n 1 3 LYS n 1 4 CYS n 1 5 TYR n 1 6 PHE n 1 7 PRO n 1 8 TYR n 1 9 LEU n 1 10 GLU n 1 11 ASN n 1 12 GLY n 1 13 TYR n 1 14 ASN n 1 15 GLN n 1 16 ASN n 1 17 HIS n 1 18 GLY n 1 19 ARG n 1 20 LYS n 1 21 PHE n 1 22 VAL n 1 23 GLN n 1 24 GLY n 1 25 LYS n 1 26 SER n 1 27 ILE n 1 28 ASP n 1 29 VAL n 1 30 ALA n 1 31 CYS n 1 32 HIS n 1 33 PRO n 1 34 GLY n 1 35 TYR n 1 36 ALA n 1 37 LEU n 1 38 PRO n 1 39 LYS n 1 40 ALA n 1 41 GLN n 1 42 THR n 1 43 THR n 1 44 VAL n 1 45 THR n 1 46 CYS n 1 47 MET n 1 48 GLU n 1 49 ASN n 1 50 GLY n 1 51 TRP n 1 52 SER n 1 53 PRO n 1 54 THR n 1 55 PRO n 1 56 ARG n 1 57 CYS n 1 58 ILE n 1 59 ARG n 1 60 VAL n 1 61 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'PICHIA PASTORIS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain KM71H _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPICZALPHAB _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CFAH_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P08603 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JGW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 61 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P08603 _struct_ref_seq.db_align_beg 386 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 446 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 386 _struct_ref_seq.pdbx_auth_seq_align_end 446 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 CBCACONH 1 2 2 CBCANH 1 3 3 'H_CCONH TOCSY' 1 4 4 'HCCH TOCSY' 1 5 5 HNCO 1 6 6 '15N EDITED TOCSY HSQC' 1 7 7 HBHACONH 1 8 8 HBHANH 1 9 8 'C_CCONH TOCSY' 1 10 8 HBCBCGCDCEHE 1 11 9 HBCBCGCDHD 1 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.temperature_units _pdbx_nmr_exptl_sample_conditions.label 1 298.0 atm 1.0 5.2 20 mM pH K ? 2 298.0 atm 1.0 5.2 20 mM pH K ? # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '10% WATER/90% D2O' _pdbx_nmr_sample_details.solvent_system ? _pdbx_nmr_sample_details.label ? _pdbx_nmr_sample_details.type ? _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 Avance Bruker 600 ? 2 Avance Bruker 800 ? # _pdbx_nmr_refine.entry_id 2JGW _pdbx_nmr_refine.method 'ARIA 2.0' _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2JGW _pdbx_nmr_details.text 'THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED FACTOR H CCP 7(402H)' # _pdbx_nmr_ensemble.entry_id 2JGW _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST OVERALL ENERGY' # _pdbx_nmr_representative.entry_id 2JGW _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CNS 1.1 'BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE,SIMONSON,WARREN' 1 'structure solution' 'CCPNMR ANALYSIS' ANALYSIS ? 2 # _exptl.entry_id 2JGW _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2JGW _struct.title 'Structure of CCP module 7 of complement factor H - The AMD at risk varient (402H)' _struct.pdbx_descriptor 'COMPLEMENT FACTOR H' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JGW _struct_keywords.pdbx_keywords 'IMMUNE RESPONSE' _struct_keywords.text ;AGE RELATED MACULAR DEGENERATION, AGE-RELATED MACULAR DEGENERATION, DISEASE MUTATION, GLYCOSAMINOGLYCAN, ALTERNATIVE SPLICING, COMPLEMENT ALTERNATE PATHWAY, GLYCOPROTEIN, INNATE IMMUNITY, IMMUNE RESPONSE, SUSHI, FACTOR H, COMPLEMENT, POLYMORPHISM ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id PRO _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 38 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ALA _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 40 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PRO _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 423 _struct_conf.end_auth_comp_id ALA _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 425 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 389 A CYS 431 1_555 ? ? ? ? ? ? ? 2.029 ? disulf2 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 57 SG ? ? A CYS 416 A CYS 442 1_555 ? ? ? ? ? ? ? 2.030 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 2 ? AD ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 CYS A 4 ? TYR A 5 ? CYS A 389 TYR A 390 AA 2 LYS A 20 ? PHE A 21 ? LYS A 405 PHE A 406 AB 1 GLY A 12 ? TYR A 13 ? GLY A 397 TYR A 398 AB 2 ALA A 30 ? CYS A 31 ? ALA A 415 CYS A 416 AC 1 SER A 26 ? ASP A 28 ? SER A 411 ASP A 413 AC 2 THR A 43 ? THR A 45 ? THR A 428 THR A 430 AD 1 TYR A 35 ? ALA A 36 ? TYR A 420 ALA A 421 AD 2 ILE A 58 ? ARG A 59 ? ILE A 443 ARG A 444 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N CYS A 4 ? N CYS A 389 O PHE A 21 ? O PHE A 406 AB 1 2 N TYR A 13 ? N TYR A 398 O ALA A 30 ? O ALA A 415 AC 1 2 N ILE A 27 ? N ILE A 412 O VAL A 44 ? O VAL A 429 AD 1 2 N ALA A 36 ? N ALA A 421 O ILE A 58 ? O ILE A 443 # _database_PDB_matrix.entry_id 2JGW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2JGW _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 386 386 LEU LEU A . n A 1 2 ARG 2 387 387 ARG ARG A . n A 1 3 LYS 3 388 388 LYS LYS A . n A 1 4 CYS 4 389 389 CYS CYS A . n A 1 5 TYR 5 390 390 TYR TYR A . n A 1 6 PHE 6 391 391 PHE PHE A . n A 1 7 PRO 7 392 392 PRO PRO A . n A 1 8 TYR 8 393 393 TYR TYR A . n A 1 9 LEU 9 394 394 LEU LEU A . n A 1 10 GLU 10 395 395 GLU GLU A . n A 1 11 ASN 11 396 396 ASN ASN A . n A 1 12 GLY 12 397 397 GLY GLY A . n A 1 13 TYR 13 398 398 TYR TYR A . n A 1 14 ASN 14 399 399 ASN ASN A . n A 1 15 GLN 15 400 400 GLN GLN A . n A 1 16 ASN 16 401 401 ASN ASN A . n A 1 17 HIS 17 402 402 HIS HIS A . n A 1 18 GLY 18 403 403 GLY GLY A . n A 1 19 ARG 19 404 404 ARG ARG A . n A 1 20 LYS 20 405 405 LYS LYS A . n A 1 21 PHE 21 406 406 PHE PHE A . n A 1 22 VAL 22 407 407 VAL VAL A . n A 1 23 GLN 23 408 408 GLN GLN A . n A 1 24 GLY 24 409 409 GLY GLY A . n A 1 25 LYS 25 410 410 LYS LYS A . n A 1 26 SER 26 411 411 SER SER A . n A 1 27 ILE 27 412 412 ILE ILE A . n A 1 28 ASP 28 413 413 ASP ASP A . n A 1 29 VAL 29 414 414 VAL VAL A . n A 1 30 ALA 30 415 415 ALA ALA A . n A 1 31 CYS 31 416 416 CYS CYS A . n A 1 32 HIS 32 417 417 HIS HIS A . n A 1 33 PRO 33 418 418 PRO PRO A . n A 1 34 GLY 34 419 419 GLY GLY A . n A 1 35 TYR 35 420 420 TYR TYR A . n A 1 36 ALA 36 421 421 ALA ALA A . n A 1 37 LEU 37 422 422 LEU LEU A . n A 1 38 PRO 38 423 423 PRO PRO A . n A 1 39 LYS 39 424 424 LYS LYS A . n A 1 40 ALA 40 425 425 ALA ALA A . n A 1 41 GLN 41 426 426 GLN GLN A . n A 1 42 THR 42 427 427 THR THR A . n A 1 43 THR 43 428 428 THR THR A . n A 1 44 VAL 44 429 429 VAL VAL A . n A 1 45 THR 45 430 430 THR THR A . n A 1 46 CYS 46 431 431 CYS CYS A . n A 1 47 MET 47 432 432 MET MET A . n A 1 48 GLU 48 433 433 GLU GLU A . n A 1 49 ASN 49 434 434 ASN ASN A . n A 1 50 GLY 50 435 435 GLY GLY A . n A 1 51 TRP 51 436 436 TRP TRP A . n A 1 52 SER 52 437 437 SER SER A . n A 1 53 PRO 53 438 438 PRO PRO A . n A 1 54 THR 54 439 439 THR THR A . n A 1 55 PRO 55 440 440 PRO PRO A . n A 1 56 ARG 56 441 441 ARG ARG A . n A 1 57 CYS 57 442 442 CYS CYS A . n A 1 58 ILE 58 443 443 ILE ILE A . n A 1 59 ARG 59 444 444 ARG ARG A . n A 1 60 VAL 60 445 445 VAL VAL A . n A 1 61 LYS 61 446 446 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-03-20 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-05-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.page_last' 3 4 'Structure model' '_citation.pdbx_database_id_DOI' 4 4 'Structure model' '_citation.title' 5 4 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_entry_details.entry_id 2JGW _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;PROTEIN SEGMENT CONTAINING THE COMMON HIS VARIENT AT POSITION 402 ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HD21 A ASN 401 ? ? HZ A PHE 406 ? ? 1.11 2 7 HA A VAL 429 ? ? HG2 A PRO 438 ? ? 1.32 3 8 HA A VAL 429 ? ? HG2 A PRO 438 ? ? 1.30 4 9 O A ASN 399 ? ? H A ASN 401 ? ? 1.57 5 13 HB3 A ASN 399 ? ? HB2 A HIS 402 ? ? 1.24 6 16 HZ A PHE 391 ? ? H A PHE 406 ? ? 1.16 7 16 HA A VAL 429 ? ? HG2 A PRO 438 ? ? 1.29 8 17 O A PHE 391 ? ? HD1 A HIS 402 ? ? 1.60 9 19 HH A TYR 398 ? ? HG12 A VAL 414 ? ? 1.13 10 20 HA A VAL 429 ? ? HG2 A PRO 438 ? ? 1.28 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 392 ? ? -75.40 -168.94 2 1 ILE A 412 ? ? -170.43 135.90 3 1 GLU A 433 ? ? -175.21 -65.31 4 1 THR A 439 ? ? 68.87 110.03 5 2 ASN A 396 ? ? -146.76 47.03 6 2 GLU A 433 ? ? -174.70 -67.16 7 2 ASN A 434 ? ? -106.53 44.78 8 2 THR A 439 ? ? 66.82 112.74 9 2 PRO A 440 ? ? -61.10 99.17 10 2 VAL A 445 ? ? -93.15 45.16 11 3 GLU A 433 ? ? -175.90 -59.84 12 3 ASN A 434 ? ? -95.28 35.71 13 3 THR A 439 ? ? 68.68 117.74 14 3 PRO A 440 ? ? -69.62 82.72 15 4 GLU A 395 ? ? 63.83 -83.50 16 4 ILE A 412 ? ? -170.06 139.16 17 4 GLU A 433 ? ? -177.01 -75.01 18 4 THR A 439 ? ? 65.38 103.12 19 4 PRO A 440 ? ? -69.69 80.00 20 4 CYS A 442 ? ? -56.16 99.26 21 5 ARG A 387 ? ? -68.15 50.38 22 5 PRO A 392 ? ? -76.97 -166.18 23 5 ILE A 412 ? ? -172.23 139.06 24 5 MET A 432 ? ? -85.88 -153.00 25 5 ASN A 434 ? ? -107.84 62.12 26 5 THR A 439 ? ? 68.05 111.05 27 5 PRO A 440 ? ? -58.29 83.06 28 6 PRO A 423 ? ? -58.41 4.20 29 6 GLU A 433 ? ? -178.83 -62.82 30 6 ASN A 434 ? ? -87.55 40.86 31 6 THR A 439 ? ? 71.14 112.64 32 7 PRO A 392 ? ? -76.20 -166.77 33 7 ASN A 399 ? ? -96.86 47.87 34 7 GLU A 433 ? ? -176.03 -77.02 35 7 THR A 439 ? ? 70.62 103.57 36 8 LEU A 394 ? ? -99.70 55.16 37 8 GLU A 395 ? ? 59.57 -86.53 38 8 ASN A 399 ? ? 34.41 71.38 39 8 ILE A 412 ? ? -176.49 138.52 40 8 GLU A 433 ? ? -168.48 -70.00 41 8 THR A 439 ? ? 62.50 96.66 42 8 PRO A 440 ? ? -69.79 86.00 43 8 ARG A 441 ? ? -151.05 87.10 44 9 ASN A 399 ? ? 72.83 -63.74 45 9 GLN A 400 ? ? 56.33 -41.26 46 9 ILE A 412 ? ? -172.67 135.93 47 9 LYS A 424 ? ? 72.47 30.55 48 9 THR A 439 ? ? 65.77 97.89 49 10 ARG A 387 ? ? -40.10 80.88 50 10 ASN A 396 ? ? -112.56 50.96 51 10 GLU A 433 ? ? -169.51 -70.82 52 10 THR A 439 ? ? 72.63 116.32 53 10 CYS A 442 ? ? -68.93 84.16 54 11 ILE A 412 ? ? -174.49 146.63 55 11 LYS A 424 ? ? -89.21 33.31 56 11 MET A 432 ? ? -94.31 -157.60 57 11 ASN A 434 ? ? -84.81 46.09 58 11 THR A 439 ? ? 67.49 109.22 59 12 PRO A 423 ? ? -59.52 -0.50 60 12 ASN A 434 ? ? -93.81 36.23 61 12 THR A 439 ? ? 66.42 121.05 62 12 PRO A 440 ? ? -64.94 89.64 63 13 ASN A 401 ? ? -140.70 45.49 64 13 ILE A 412 ? ? 179.95 127.31 65 13 ASN A 434 ? ? -87.32 31.60 66 13 THR A 439 ? ? 73.21 107.23 67 14 MET A 432 ? ? -89.81 -157.46 68 14 THR A 439 ? ? 67.72 108.22 69 15 ASN A 396 ? ? 72.70 -9.74 70 15 ASN A 399 ? ? -98.46 47.01 71 15 ILE A 412 ? ? -171.47 135.48 72 15 LYS A 424 ? ? -84.69 43.32 73 15 ASN A 434 ? ? -97.68 46.25 74 15 THR A 439 ? ? 71.11 123.57 75 15 PRO A 440 ? ? -65.62 92.75 76 16 TYR A 393 ? ? -51.76 106.08 77 16 MET A 432 ? ? -84.83 -151.76 78 16 THR A 439 ? ? 68.08 108.83 79 17 ASN A 396 ? ? -153.38 22.47 80 17 ILE A 412 ? ? -173.52 140.93 81 17 PRO A 423 ? ? -54.36 -119.17 82 17 GLN A 426 ? ? 79.32 -148.33 83 17 ASN A 434 ? ? -118.03 51.06 84 17 THR A 439 ? ? 71.81 110.14 85 18 LYS A 388 ? ? 58.32 162.22 86 18 ASN A 396 ? ? -106.60 48.88 87 18 ALA A 425 ? ? -149.68 40.76 88 18 THR A 427 ? ? -150.61 -4.47 89 18 GLU A 433 ? ? -173.77 -64.25 90 18 ASN A 434 ? ? -84.21 30.28 91 18 THR A 439 ? ? 68.00 111.53 92 18 PRO A 440 ? ? -60.79 97.92 93 19 ARG A 387 ? ? 52.53 18.31 94 19 GLU A 395 ? ? -44.17 -78.10 95 19 ASN A 396 ? ? -100.89 42.00 96 19 ASN A 399 ? ? -79.94 42.59 97 19 ILE A 412 ? ? -170.29 135.70 98 19 CYS A 416 ? ? 44.17 144.46 99 19 MET A 432 ? ? -90.51 -157.32 100 19 ASN A 434 ? ? -99.63 51.80 101 19 THR A 439 ? ? 69.61 113.40 102 20 ARG A 387 ? ? -101.46 79.62 103 20 ASN A 396 ? ? -134.06 -31.81 104 20 TYR A 398 ? ? 39.73 26.76 105 20 ASN A 399 ? ? -102.77 43.60 106 20 ILE A 412 ? ? -170.31 146.46 107 20 THR A 439 ? ? 64.25 102.86 108 20 ARG A 441 ? ? -153.57 74.65 #