data_2JV4 # _entry.id 2JV4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JV4 pdb_00002jv4 10.2210/pdb2jv4/pdb RCSB RCSB100328 ? ? WWPDB D_1000100328 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2007-10-23 _pdbx_database_PDB_obs_spr.pdb_id 2JV4 _pdbx_database_PDB_obs_spr.replace_pdb_id 2JM7 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2JV4 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2007-09-11 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ng, C.A.' 1 'Kato, Y.' 2 'Tanokura, M.' 3 'Brownlee, R.T.C.' 4 # _citation.id primary _citation.title 'Structural characterisation of PinA WW domain and a comparison with other Group IV WW domains, Pin1 and Ess1' _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1784 _citation.page_first 1208 _citation.page_last 1214 _citation.year 2008 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18503784 _citation.pdbx_database_id_DOI 10.1016/j.bbapap.2008.04.026 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ng, C.A.' 1 ? primary 'Kato, Y.' 2 ? primary 'Tanokura, M.' 3 ? primary 'Brownlee, R.T.C.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Peptidyl-prolyl cis/trans isomerase' _entity.formula_weight 6256.968 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 5.2.1.8 _entity.pdbx_mutation ? _entity.pdbx_fragment 'WW Domain, Residues UNP 1-52' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSMVNTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADTDMETLKMYMATYH _entity_poly.pdbx_seq_one_letter_code_can GSMVNTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADTDMETLKMYMATYH _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 VAL n 1 5 ASN n 1 6 THR n 1 7 GLY n 1 8 LEU n 1 9 PRO n 1 10 ALA n 1 11 GLY n 1 12 TRP n 1 13 GLU n 1 14 VAL n 1 15 ARG n 1 16 HIS n 1 17 SER n 1 18 ASN n 1 19 SER n 1 20 LYS n 1 21 ASN n 1 22 LEU n 1 23 PRO n 1 24 TYR n 1 25 TYR n 1 26 PHE n 1 27 ASN n 1 28 PRO n 1 29 ALA n 1 30 THR n 1 31 ARG n 1 32 GLU n 1 33 SER n 1 34 ARG n 1 35 TRP n 1 36 GLU n 1 37 PRO n 1 38 PRO n 1 39 ALA n 1 40 ASP n 1 41 THR n 1 42 ASP n 1 43 MET n 1 44 GLU n 1 45 THR n 1 46 LEU n 1 47 LYS n 1 48 MET n 1 49 TYR n 1 50 MET n 1 51 ALA n 1 52 THR n 1 53 TYR n 1 54 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Emericella _entity_src_gen.pdbx_gene_src_gene pinA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Emericella nidulans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 162425 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PLYSS _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O42735_EMENI _struct_ref.pdbx_db_accession O42735 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MVNTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADTDMETLKMYMATYH _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JV4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 54 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O42735 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 52 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 53 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2JV4 GLY A 1 ? UNP O42735 ? ? 'expression tag' 0 1 1 2JV4 SER A 2 ? UNP O42735 ? ? 'expression tag' 1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D HNHA' 1 2 1 '3D_13C- SEPARATED_ NOESY' 1 3 1 '3D_15N- SEPARATED_ NOESY' 1 4 1 '2D 1H-15N HSQC' 1 5 1 '3D HNCACB' 1 6 1 '3D HN(COCA)CB' 1 7 1 '3D HCCH-COSY' 1 8 1 '3D HCCH-TOCSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.2 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 283 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'VARIAN INOVA' # _pdbx_nmr_refine.entry_id 2JV4 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details 'ENERGY MINIMISASTION SUBJECT TO NMR CONSTRAINTS' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2JV4 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2JV4 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.1 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 Goddard 'chemical shift assignment' Sparky 3 3 Goddard 'data analysis' Sparky 3 4 Goddard 'peak picking' Sparky 3 5 Varian collection VNMR ? 6 'Cornilescu, Delaglio and Bax' 'dihedral angle' TALOS ? 7 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Koll' refinement Amber 9 8 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Koll' 'energy minimisation' Amber 9 9 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'Minimisation of the 20 NMR conformers with NMR constraints.' _exptl.entry_id 2JV4 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2JV4 _struct.title 'Structure Characterisation of PINA WW Domain and Comparison with other Group IV WW Domains, PIN1 and ESS1' _struct.pdbx_model_details 'Minimisation of the 20 NMR conformers with NMR constraints.' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JV4 _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'PPIASE DOMAIN, WW DOMAIN GROUP IV, Isomerase, Rotamase' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 42 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ALA _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 51 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 41 _struct_conf.end_auth_comp_id ALA _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 50 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 14 ? HIS A 16 ? VAL A 13 HIS A 15 A 2 PRO A 23 ? ASN A 27 ? PRO A 22 ASN A 26 A 3 GLU A 32 ? ARG A 34 ? GLU A 31 ARG A 33 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 15 ? N ARG A 14 O TYR A 24 ? O TYR A 23 A 2 3 N TYR A 25 ? N TYR A 24 O ARG A 34 ? O ARG A 33 # _atom_sites.entry_id 2JV4 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 SER 2 1 1 SER SER A . n A 1 3 MET 3 2 2 MET MET A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 ASN 5 4 4 ASN ASN A . n A 1 6 THR 6 5 5 THR THR A . n A 1 7 GLY 7 6 6 GLY GLY A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 PRO 9 8 8 PRO PRO A . n A 1 10 ALA 10 9 9 ALA ALA A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 TRP 12 11 11 TRP TRP A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 HIS 16 15 15 HIS HIS A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 SER 19 18 18 SER SER A . n A 1 20 LYS 20 19 19 LYS LYS A . n A 1 21 ASN 21 20 20 ASN ASN A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 PRO 23 22 22 PRO PRO A . n A 1 24 TYR 24 23 23 TYR TYR A . n A 1 25 TYR 25 24 24 TYR TYR A . n A 1 26 PHE 26 25 25 PHE PHE A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 PRO 28 27 27 PRO PRO A . n A 1 29 ALA 29 28 28 ALA ALA A . n A 1 30 THR 30 29 29 THR THR A . n A 1 31 ARG 31 30 30 ARG ARG A . n A 1 32 GLU 32 31 31 GLU GLU A . n A 1 33 SER 33 32 32 SER SER A . n A 1 34 ARG 34 33 33 ARG ARG A . n A 1 35 TRP 35 34 34 TRP TRP A . n A 1 36 GLU 36 35 35 GLU GLU A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 PRO 38 37 37 PRO PRO A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 ASP 40 39 39 ASP ASP A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 ASP 42 41 41 ASP ASP A . n A 1 43 MET 43 42 42 MET MET A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 THR 45 44 44 THR THR A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 LYS 47 46 46 LYS LYS A . n A 1 48 MET 48 47 47 MET MET A . n A 1 49 TYR 49 48 48 TYR TYR A . n A 1 50 MET 50 49 49 MET MET A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 TYR 53 52 52 TYR TYR A . n A 1 54 HIS 54 53 53 HIS HIS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'PEPTIDYL-PROLYL CIS/TRANS ISOMERASE' 1.8 mM '[U-100% 13C; U-100% 15N]' 1 'sodium phosphate' 50 mM ? 1 'sodium chloride' 50 mM ? 1 'sodium azide' 0.02 % ? 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 8 HD1 A HIS 15 ? ? H A SER 16 ? ? 1.18 2 12 HG A SER 1 ? ? OE1 A GLU 12 ? ? 1.58 3 14 OD2 A ASP 41 ? ? HG1 A THR 44 ? ? 1.59 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 123.88 120.30 3.58 0.50 N 2 1 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH2 A ARG 14 ? ? 117.13 120.30 -3.17 0.50 N 3 1 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 123.50 120.30 3.20 0.50 N 4 5 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH1 A ARG 30 ? ? 123.30 120.30 3.00 0.50 N 5 5 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 123.90 120.30 3.60 0.50 N 6 6 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 124.41 120.30 4.11 0.50 N 7 6 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH1 A ARG 30 ? ? 123.78 120.30 3.48 0.50 N 8 7 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 124.17 120.30 3.87 0.50 N 9 7 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH2 A ARG 33 ? ? 116.72 120.30 -3.58 0.50 N 10 7 CB A LEU 45 ? ? CG A LEU 45 ? ? CD1 A LEU 45 ? ? 123.55 111.00 12.55 1.70 N 11 8 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 123.90 120.30 3.60 0.50 N 12 8 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH2 A ARG 33 ? ? 116.98 120.30 -3.32 0.50 N 13 8 CB A LEU 45 ? ? CG A LEU 45 ? ? CD1 A LEU 45 ? ? 121.63 111.00 10.63 1.70 N 14 10 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 124.61 120.30 4.31 0.50 N 15 11 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 123.36 120.30 3.06 0.50 N 16 11 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 124.22 120.30 3.92 0.50 N 17 11 CB A LEU 45 ? ? CG A LEU 45 ? ? CD1 A LEU 45 ? ? 122.60 111.00 11.60 1.70 N 18 12 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 125.03 120.30 4.73 0.50 N 19 13 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 123.36 120.30 3.06 0.50 N 20 13 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH1 A ARG 30 ? ? 123.68 120.30 3.38 0.50 N 21 14 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH1 A ARG 30 ? ? 123.93 120.30 3.63 0.50 N 22 14 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 123.70 120.30 3.40 0.50 N 23 15 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 123.83 120.30 3.53 0.50 N 24 15 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 123.56 120.30 3.26 0.50 N 25 16 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 123.61 120.30 3.31 0.50 N 26 16 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 124.05 120.30 3.75 0.50 N 27 17 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH1 A ARG 30 ? ? 123.98 120.30 3.68 0.50 N 28 17 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 124.30 120.30 4.00 0.50 N 29 18 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 123.32 120.30 3.02 0.50 N 30 19 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 123.36 120.30 3.06 0.50 N 31 19 CB A LEU 45 ? ? CG A LEU 45 ? ? CD1 A LEU 45 ? ? 122.38 111.00 11.38 1.70 N 32 20 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 124.27 120.30 3.97 0.50 N 33 20 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH1 A ARG 33 ? ? 125.14 120.30 4.84 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 12 ? ? 174.42 99.16 2 1 MET A 42 ? ? -25.97 -42.44 3 2 PRO A 8 ? ? -77.48 -153.86 4 2 ASN A 17 ? ? 174.85 135.70 5 2 ASN A 20 ? ? -79.16 24.52 6 2 TRP A 34 ? ? -144.50 -17.16 7 2 MET A 42 ? ? -37.83 -35.88 8 2 TYR A 48 ? ? -104.11 -70.03 9 2 ALA A 50 ? ? -162.50 60.30 10 2 THR A 51 ? ? -25.94 91.20 11 3 PRO A 8 ? ? -78.67 -150.82 12 3 SER A 16 ? ? -51.19 108.09 13 3 ASN A 17 ? ? 152.26 140.78 14 3 LYS A 19 ? ? -79.10 -166.17 15 3 ARG A 30 ? ? -47.18 104.56 16 3 TRP A 34 ? ? -142.54 -18.28 17 3 ASP A 41 ? ? -107.88 53.42 18 3 MET A 42 ? ? -27.20 -40.38 19 4 PRO A 8 ? ? -75.80 -158.34 20 4 TRP A 11 ? ? -141.64 -2.47 21 4 ARG A 30 ? ? -50.36 101.12 22 4 TRP A 34 ? ? -130.62 -36.33 23 4 ASP A 41 ? ? -119.09 60.27 24 4 TYR A 48 ? ? -121.27 -56.25 25 5 MET A 2 ? ? 166.04 145.49 26 5 PRO A 8 ? ? -77.24 -141.45 27 5 HIS A 15 ? ? -172.39 137.60 28 5 ASP A 41 ? ? -107.09 48.43 29 5 MET A 42 ? ? -29.38 -43.19 30 5 TYR A 48 ? ? -135.42 -58.35 31 6 GLU A 12 ? ? 175.73 140.85 32 6 ARG A 30 ? ? -65.00 97.89 33 6 ASP A 41 ? ? -115.17 56.57 34 7 PRO A 8 ? ? -77.95 -147.15 35 7 ASN A 20 ? ? -88.10 46.67 36 7 ARG A 30 ? ? -32.70 103.10 37 7 MET A 42 ? ? 60.99 -40.05 38 7 MET A 47 ? ? -69.87 18.31 39 7 TYR A 48 ? ? -138.28 -32.38 40 8 PRO A 8 ? ? -77.30 -152.23 41 8 MET A 42 ? ? -5.35 -45.39 42 9 GLU A 12 ? ? 174.72 124.96 43 9 ASN A 20 ? ? -82.17 32.78 44 9 THR A 29 ? ? -174.27 130.31 45 9 GLU A 31 ? ? -170.98 -180.00 46 9 ASP A 41 ? ? -105.14 48.30 47 9 MET A 42 ? ? -22.07 -47.20 48 9 TYR A 48 ? ? -107.20 -61.75 49 10 PRO A 8 ? ? -80.52 -149.50 50 10 ALA A 9 ? ? -63.24 4.65 51 10 MET A 42 ? ? -32.92 -38.15 52 11 PRO A 8 ? ? -75.26 -157.29 53 11 ARG A 30 ? ? -57.24 106.90 54 11 MET A 42 ? ? 86.60 -43.00 55 11 MET A 47 ? ? -67.88 6.95 56 12 MET A 2 ? ? -151.75 20.74 57 12 MET A 42 ? ? -27.30 -42.28 58 12 ALA A 50 ? ? -151.11 67.24 59 13 ALA A 28 ? ? -88.45 -97.71 60 13 ASP A 41 ? ? -95.53 54.54 61 13 MET A 42 ? ? -30.36 -39.00 62 14 ASP A 41 ? ? -108.95 49.53 63 14 MET A 42 ? ? -25.29 -47.42 64 15 PRO A 8 ? ? -80.35 -133.08 65 15 ASN A 17 ? ? -178.19 116.57 66 15 ARG A 30 ? ? -52.15 98.08 67 15 TRP A 34 ? ? -140.48 -58.73 68 15 ASP A 41 ? ? -105.18 50.69 69 15 MET A 42 ? ? -30.02 -35.54 70 16 GLU A 12 ? ? 179.51 119.91 71 16 ARG A 30 ? ? -70.52 44.07 72 16 MET A 42 ? ? -18.41 -43.33 73 16 MET A 49 ? ? -68.85 5.77 74 17 GLU A 12 ? ? 176.09 172.97 75 17 MET A 42 ? ? 69.57 -43.71 76 17 TYR A 48 ? ? -122.69 -58.10 77 18 MET A 2 ? ? -68.60 6.29 78 18 ALA A 9 ? ? -55.11 -9.48 79 18 GLU A 12 ? ? 169.20 174.14 80 18 MET A 42 ? ? -29.62 -40.62 81 18 MET A 47 ? ? -63.36 8.13 82 18 TYR A 48 ? ? -133.75 -44.28 83 18 ALA A 50 ? ? -165.37 66.29 84 19 ALA A 9 ? ? -71.61 33.37 85 19 LYS A 19 ? ? -163.16 111.59 86 19 ARG A 30 ? ? -65.09 97.67 87 19 MET A 42 ? ? 60.76 -38.45 88 20 PRO A 8 ? ? -79.35 -135.62 89 20 ARG A 30 ? ? -66.73 89.15 90 20 PRO A 37 ? ? -79.09 -166.90 91 20 MET A 42 ? ? 61.55 -37.03 92 20 TYR A 48 ? ? -127.36 -57.15 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 17 _pdbx_validate_peptide_omega.auth_comp_id_1 MET _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 49 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ALA _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 50 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.00 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 3 ARG A 14 ? ? 0.088 'SIDE CHAIN' 2 12 ARG A 33 ? ? 0.095 'SIDE CHAIN' 3 13 TYR A 24 ? ? 0.081 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 2 Y 1 A GLY 0 ? A GLY 1 3 3 Y 1 A GLY 0 ? A GLY 1 4 4 Y 1 A GLY 0 ? A GLY 1 5 5 Y 1 A GLY 0 ? A GLY 1 6 6 Y 1 A GLY 0 ? A GLY 1 7 7 Y 1 A GLY 0 ? A GLY 1 8 8 Y 1 A GLY 0 ? A GLY 1 9 9 Y 1 A GLY 0 ? A GLY 1 10 10 Y 1 A GLY 0 ? A GLY 1 11 11 Y 1 A GLY 0 ? A GLY 1 12 12 Y 1 A GLY 0 ? A GLY 1 13 13 Y 1 A GLY 0 ? A GLY 1 14 14 Y 1 A GLY 0 ? A GLY 1 15 15 Y 1 A GLY 0 ? A GLY 1 16 16 Y 1 A GLY 0 ? A GLY 1 17 17 Y 1 A GLY 0 ? A GLY 1 18 18 Y 1 A GLY 0 ? A GLY 1 19 19 Y 1 A GLY 0 ? A GLY 1 20 20 Y 1 A GLY 0 ? A GLY 1 #