data_2L2U # _entry.id 2L2U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2L2U pdb_00002l2u 10.2210/pdb2l2u/pdb RCSB RCSB101886 ? ? WWPDB D_1000101886 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _database_PDB_caveat.id 1 _database_PDB_caveat.text ;CHIRALITY ERROR AT ATOM C4' OF DT8 IN MODEL 1 ; # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L2U _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-08-27 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 1ycw PDB . unspecified 1yct PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hazel, R.D.' 1 'de los Santos, C.' 2 # _citation.id primary _citation.title ;NMR solution structures of clustered abasic site lesions in DNA: structural differences between 3'-staggered (-3) and 5'-staggered (+3) bistranded lesions. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 49 _citation.page_first 8978 _citation.page_last 8987 _citation.year 2010 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20825249 _citation.pdbx_database_id_DOI 10.1021/bi101021e # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hazel, R.D.' 1 ? primary 'de los Santos, C.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3') ; 4180.719 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3') ; 4131.682 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DA)(DG)(DC)(DG)(3DR)(DG)(DT)(DA)(DT)(DA)(DA)(DG)(DC)' CAGCGNGTATAAGC A ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DT)(DA)(3DR)(DA)(DC)(DA)(DC)(DG)(DC)(DT)(DG)' GCTTANACACGCTG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DG n 1 4 DC n 1 5 DG n 1 6 3DR n 1 7 DG n 1 8 DT n 1 9 DA n 1 10 DT n 1 11 DA n 1 12 DA n 1 13 DG n 1 14 DC n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DT n 2 5 DA n 2 6 3DR n 2 7 DA n 2 8 DC n 2 9 DA n 2 10 DC n 2 11 DG n 2 12 DC n 2 13 DT n 2 14 DG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'Synthetic peptide' 2 1 sample ? ? ? ? ? 'Synthetic peptide' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3DR 'DNA linking' . "1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" 'ABASIC DIDEOXYRIBOSE' 'C5 H11 O6 P' 198.111 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 3DR 6 6 6 3DR 3DR A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DA 9 9 9 DA DA A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DA 11 11 11 DA DA A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DC 14 14 14 DC DC A . n B 2 1 DG 1 15 15 DG DG B . n B 2 2 DC 2 16 16 DC DC B . n B 2 3 DT 3 17 17 DT DT B . n B 2 4 DT 4 18 18 DT DT B . n B 2 5 DA 5 19 19 DA DA B . n B 2 6 3DR 6 20 20 3DR 3DR B . n B 2 7 DA 7 21 21 DA DA B . n B 2 8 DC 8 22 22 DC DC B . n B 2 9 DA 9 23 23 DA DA B . n B 2 10 DC 10 24 24 DC DC B . n B 2 11 DG 11 25 25 DG DG B . n B 2 12 DC 12 26 26 DC DC B . n B 2 13 DT 13 27 27 DT DT B . n B 2 14 DG 14 28 28 DG DG B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2L2U _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L2U _struct.title ;NMR Solution Structures of +3 (5' staggered) Bistranded Abasic Site Lesions in DNA ; _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L2U _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'Abasic Lesion, Bistranded DNA Lesions, Clustered DNA damage, Multiple DNA Damage, Ionizing Radiation, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 2L2U 2L2U 1 1 CAGCGNGTATAAGC ? 2 PDB 2L2U 2L2U 2 15 GCTTANACACGCTG ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2L2U A 1 ? 14 ? 2L2U 1 ? 14 ? 1 14 2 2 2L2U B 1 ? 14 ? 2L2U 15 ? 28 ? 15 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 5 "O3'" ? ? ? 1_555 A 3DR 6 P ? ? A DG 5 A 3DR 6 1_555 ? ? ? ? ? ? ? 1.619 ? ? covale2 covale both ? A 3DR 6 "O3'" ? ? ? 1_555 A DG 7 P ? ? A 3DR 6 A DG 7 1_555 ? ? ? ? ? ? ? 1.622 ? ? covale3 covale both ? B DA 5 "O3'" ? ? ? 1_555 B 3DR 6 P ? ? B DA 19 B 3DR 20 1_555 ? ? ? ? ? ? ? 1.620 ? ? covale4 covale both ? B 3DR 6 "O3'" ? ? ? 1_555 B DA 7 P ? ? B 3DR 20 B DA 21 1_555 ? ? ? ? ? ? ? 1.622 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 14 N1 ? ? A DC 1 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 14 O6 ? ? A DC 1 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 14 N2 ? ? A DC 1 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 13 N3 ? ? A DA 2 B DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 13 O4 ? ? A DA 2 B DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 12 N3 ? ? A DG 3 B DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 12 O2 ? ? A DG 3 B DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 12 N4 ? ? A DG 3 B DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 11 N1 ? ? A DC 4 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 11 O6 ? ? A DC 4 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 11 N2 ? ? A DC 4 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 5 B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 5 B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 5 B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 7 B DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 7 B DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 7 B DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 8 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 8 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 10 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 10 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 11 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 11 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 12 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 12 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 13 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 13 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 13 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 14 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 14 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 14 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 14 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 14 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C4 A DC 1 ? ? N4 A DC 1 ? ? 1.432 1.335 0.097 0.009 N 2 1 C6 A DA 2 ? ? N6 A DA 2 ? ? 1.431 1.335 0.096 0.008 N 3 1 C2 A DG 3 ? ? N2 A DG 3 ? ? 1.428 1.341 0.087 0.010 N 4 1 C4 A DC 4 ? ? N4 A DC 4 ? ? 1.431 1.335 0.096 0.009 N 5 1 C2 A DG 5 ? ? N2 A DG 5 ? ? 1.425 1.341 0.084 0.010 N 6 1 C2 A DG 7 ? ? N2 A DG 7 ? ? 1.428 1.341 0.087 0.010 N 7 1 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.533 1.496 0.037 0.006 N 8 1 C6 A DA 9 ? ? N6 A DA 9 ? ? 1.430 1.335 0.095 0.008 N 9 1 C6 A DA 11 ? ? N6 A DA 11 ? ? 1.434 1.335 0.099 0.008 N 10 1 C6 A DA 12 ? ? N6 A DA 12 ? ? 1.430 1.335 0.095 0.008 N 11 1 C2 A DG 13 ? ? N2 A DG 13 ? ? 1.426 1.341 0.085 0.010 N 12 1 C4 A DC 14 ? ? N4 A DC 14 ? ? 1.429 1.335 0.094 0.009 N 13 1 C2 B DG 15 ? ? N2 B DG 15 ? ? 1.427 1.341 0.086 0.010 N 14 1 C4 B DC 16 ? ? N4 B DC 16 ? ? 1.430 1.335 0.095 0.009 N 15 1 C6 B DA 19 ? ? N6 B DA 19 ? ? 1.431 1.335 0.096 0.008 N 16 1 C6 B DA 21 ? ? N6 B DA 21 ? ? 1.425 1.335 0.090 0.008 N 17 1 C4 B DC 22 ? ? N4 B DC 22 ? ? 1.430 1.335 0.095 0.009 N 18 1 C6 B DA 23 ? ? N6 B DA 23 ? ? 1.431 1.335 0.096 0.008 N 19 1 C4 B DC 24 ? ? N4 B DC 24 ? ? 1.428 1.335 0.093 0.009 N 20 1 C2 B DG 25 ? ? N2 B DG 25 ? ? 1.427 1.341 0.086 0.010 N 21 1 C4 B DC 26 ? ? N4 B DC 26 ? ? 1.431 1.335 0.096 0.009 N 22 1 C2 B DG 28 ? ? N2 B DG 28 ? ? 1.429 1.341 0.088 0.010 N 23 2 C4 A DC 1 ? ? N4 A DC 1 ? ? 1.433 1.335 0.098 0.009 N 24 2 C6 A DA 2 ? ? N6 A DA 2 ? ? 1.429 1.335 0.094 0.008 N 25 2 C2 A DG 3 ? ? N2 A DG 3 ? ? 1.428 1.341 0.087 0.010 N 26 2 C4 A DC 4 ? ? N4 A DC 4 ? ? 1.431 1.335 0.096 0.009 N 27 2 C2 A DG 5 ? ? N2 A DG 5 ? ? 1.426 1.341 0.085 0.010 N 28 2 C2 A DG 7 ? ? N2 A DG 7 ? ? 1.427 1.341 0.086 0.010 N 29 2 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.534 1.496 0.038 0.006 N 30 2 C6 A DA 9 ? ? N6 A DA 9 ? ? 1.427 1.335 0.092 0.008 N 31 2 C6 A DA 11 ? ? N6 A DA 11 ? ? 1.434 1.335 0.099 0.008 N 32 2 C6 A DA 12 ? ? N6 A DA 12 ? ? 1.429 1.335 0.094 0.008 N 33 2 C2 A DG 13 ? ? N2 A DG 13 ? ? 1.427 1.341 0.086 0.010 N 34 2 C4 A DC 14 ? ? N4 A DC 14 ? ? 1.429 1.335 0.094 0.009 N 35 2 C2 B DG 15 ? ? N2 B DG 15 ? ? 1.426 1.341 0.085 0.010 N 36 2 C4 B DC 16 ? ? N4 B DC 16 ? ? 1.430 1.335 0.095 0.009 N 37 2 C6 B DA 19 ? ? N6 B DA 19 ? ? 1.431 1.335 0.096 0.008 N 38 2 C6 B DA 21 ? ? N6 B DA 21 ? ? 1.429 1.335 0.094 0.008 N 39 2 C4 B DC 22 ? ? N4 B DC 22 ? ? 1.427 1.335 0.092 0.009 N 40 2 C6 B DA 23 ? ? N6 B DA 23 ? ? 1.432 1.335 0.097 0.008 N 41 2 C4 B DC 24 ? ? N4 B DC 24 ? ? 1.427 1.335 0.092 0.009 N 42 2 C2 B DG 25 ? ? N2 B DG 25 ? ? 1.425 1.341 0.084 0.010 N 43 2 C4 B DC 26 ? ? N4 B DC 26 ? ? 1.431 1.335 0.096 0.009 N 44 2 C2 B DG 28 ? ? N2 B DG 28 ? ? 1.430 1.341 0.089 0.010 N 45 3 C4 A DC 1 ? ? N4 A DC 1 ? ? 1.432 1.335 0.097 0.009 N 46 3 C6 A DA 2 ? ? N6 A DA 2 ? ? 1.429 1.335 0.094 0.008 N 47 3 C2 A DG 3 ? ? N2 A DG 3 ? ? 1.428 1.341 0.087 0.010 N 48 3 C4 A DC 4 ? ? N4 A DC 4 ? ? 1.433 1.335 0.098 0.009 N 49 3 C2 A DG 5 ? ? N2 A DG 5 ? ? 1.426 1.341 0.085 0.010 N 50 3 C2 A DG 7 ? ? N2 A DG 7 ? ? 1.425 1.341 0.084 0.010 N 51 3 C6 A DA 9 ? ? N6 A DA 9 ? ? 1.430 1.335 0.095 0.008 N 52 3 C6 A DA 11 ? ? N6 A DA 11 ? ? 1.435 1.335 0.100 0.008 N 53 3 C6 A DA 12 ? ? N6 A DA 12 ? ? 1.429 1.335 0.094 0.008 N 54 3 C2 A DG 13 ? ? N2 A DG 13 ? ? 1.427 1.341 0.086 0.010 N 55 3 C4 A DC 14 ? ? N4 A DC 14 ? ? 1.430 1.335 0.095 0.009 N 56 3 C2 B DG 15 ? ? N2 B DG 15 ? ? 1.426 1.341 0.085 0.010 N 57 3 C4 B DC 16 ? ? N4 B DC 16 ? ? 1.429 1.335 0.094 0.009 N 58 3 C6 B DA 19 ? ? N6 B DA 19 ? ? 1.433 1.335 0.098 0.008 N 59 3 C6 B DA 21 ? ? N6 B DA 21 ? ? 1.428 1.335 0.093 0.008 N 60 3 C4 B DC 22 ? ? N4 B DC 22 ? ? 1.428 1.335 0.093 0.009 N 61 3 C6 B DA 23 ? ? N6 B DA 23 ? ? 1.430 1.335 0.095 0.008 N 62 3 C4 B DC 24 ? ? N4 B DC 24 ? ? 1.431 1.335 0.096 0.009 N 63 3 C2 B DG 25 ? ? N2 B DG 25 ? ? 1.425 1.341 0.084 0.010 N 64 3 C4 B DC 26 ? ? N4 B DC 26 ? ? 1.431 1.335 0.096 0.009 N 65 3 C2 B DG 28 ? ? N2 B DG 28 ? ? 1.430 1.341 0.089 0.010 N 66 4 C4 A DC 1 ? ? N4 A DC 1 ? ? 1.433 1.335 0.098 0.009 N 67 4 C6 A DA 2 ? ? N6 A DA 2 ? ? 1.429 1.335 0.094 0.008 N 68 4 C2 A DG 3 ? ? N2 A DG 3 ? ? 1.427 1.341 0.086 0.010 N 69 4 C4 A DC 4 ? ? N4 A DC 4 ? ? 1.433 1.335 0.098 0.009 N 70 4 C2 A DG 5 ? ? N2 A DG 5 ? ? 1.424 1.341 0.083 0.010 N 71 4 C2 A DG 7 ? ? N2 A DG 7 ? ? 1.425 1.341 0.084 0.010 N 72 4 C6 A DA 9 ? ? N6 A DA 9 ? ? 1.428 1.335 0.093 0.008 N 73 4 C6 A DA 11 ? ? N6 A DA 11 ? ? 1.433 1.335 0.098 0.008 N 74 4 C6 A DA 12 ? ? N6 A DA 12 ? ? 1.429 1.335 0.094 0.008 N 75 4 C2 A DG 13 ? ? N2 A DG 13 ? ? 1.427 1.341 0.086 0.010 N 76 4 C4 A DC 14 ? ? N4 A DC 14 ? ? 1.430 1.335 0.095 0.009 N 77 4 C2 B DG 15 ? ? N2 B DG 15 ? ? 1.427 1.341 0.086 0.010 N 78 4 C4 B DC 16 ? ? N4 B DC 16 ? ? 1.429 1.335 0.094 0.009 N 79 4 C6 B DA 19 ? ? N6 B DA 19 ? ? 1.432 1.335 0.097 0.008 N 80 4 C6 B DA 21 ? ? N6 B DA 21 ? ? 1.430 1.335 0.095 0.008 N 81 4 C4 B DC 22 ? ? N4 B DC 22 ? ? 1.427 1.335 0.092 0.009 N 82 4 C6 B DA 23 ? ? N6 B DA 23 ? ? 1.430 1.335 0.095 0.008 N 83 4 C4 B DC 24 ? ? N4 B DC 24 ? ? 1.432 1.335 0.097 0.009 N 84 4 C2 B DG 25 ? ? N2 B DG 25 ? ? 1.427 1.341 0.086 0.010 N 85 4 C4 B DC 26 ? ? N4 B DC 26 ? ? 1.432 1.335 0.097 0.009 N 86 4 C2 B DG 28 ? ? N2 B DG 28 ? ? 1.429 1.341 0.088 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" A DA 2 ? ? "C4'" A DA 2 ? ? "O4'" A DA 2 ? ? 117.89 109.80 8.09 1.10 N 2 1 "C5'" A DG 3 ? ? "C4'" A DG 3 ? ? "O4'" A DG 3 ? ? 118.15 109.80 8.35 1.10 N 3 1 "C5'" A DC 4 ? ? "C4'" A DC 4 ? ? "O4'" A DC 4 ? ? 117.61 109.80 7.81 1.10 N 4 1 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 116.35 113.10 3.25 0.50 N 5 1 "C5'" A DG 7 ? ? "C4'" A DG 7 ? ? "O4'" A DG 7 ? ? 119.04 109.80 9.24 1.10 N 6 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? "C2'" A DG 7 ? ? 100.82 105.90 -5.08 0.80 N 7 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.46 108.30 3.16 0.30 N 8 1 N7 A DG 7 ? ? C8 A DG 7 ? ? N9 A DG 7 ? ? 116.14 113.10 3.04 0.50 N 9 1 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.70 106.40 -2.70 0.40 N 10 1 "C5'" A DT 8 ? ? "C4'" A DT 8 ? ? "O4'" A DT 8 ? ? 116.56 109.80 6.76 1.10 N 11 1 "C5'" A DA 12 ? ? "C4'" A DA 12 ? ? "O4'" A DA 12 ? ? 117.13 109.80 7.33 1.10 N 12 1 N7 B DG 15 ? ? C8 B DG 15 ? ? N9 B DG 15 ? ? 116.61 113.10 3.51 0.50 N 13 1 C8 B DG 15 ? ? N9 B DG 15 ? ? C4 B DG 15 ? ? 103.96 106.40 -2.44 0.40 N 14 1 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 110.09 106.00 4.09 0.60 N 15 1 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 99.36 105.90 -6.54 0.80 N 16 1 C4 B DT 17 ? ? C5 B DT 17 ? ? C6 B DT 17 ? ? 121.64 118.00 3.64 0.60 N 17 1 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 123.92 119.00 4.92 0.60 N 18 1 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 114.43 122.90 -8.47 0.60 N 19 1 "C5'" B DT 18 ? ? "C4'" B DT 18 ? ? "O4'" B DT 18 ? ? 120.49 109.80 10.69 1.10 N 20 1 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 125.11 119.00 6.11 0.60 N 21 1 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 114.19 122.90 -8.71 0.60 N 22 1 "C5'" B DA 21 ? ? "C4'" B DA 21 ? ? "O4'" B DA 21 ? ? 118.41 109.80 8.61 1.10 N 23 1 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? "C2'" B DA 21 ? ? 98.69 105.90 -7.21 0.80 N 24 1 "C5'" B DA 23 ? ? "C4'" B DA 23 ? ? "O4'" B DA 23 ? ? 116.66 109.80 6.86 1.10 N 25 1 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 117.26 113.80 3.46 0.50 N 26 1 C6 B DT 27 ? ? C5 B DT 27 ? ? C7 B DT 27 ? ? 119.25 122.90 -3.65 0.60 N 27 2 "C5'" A DA 2 ? ? "C4'" A DA 2 ? ? "O4'" A DA 2 ? ? 118.10 109.80 8.30 1.10 N 28 2 "C5'" A DG 3 ? ? "C4'" A DG 3 ? ? "O4'" A DG 3 ? ? 117.38 109.80 7.58 1.10 N 29 2 N7 A DG 3 ? ? C8 A DG 3 ? ? N9 A DG 3 ? ? 116.15 113.10 3.05 0.50 N 30 2 "C5'" A DC 4 ? ? "C4'" A DC 4 ? ? "O4'" A DC 4 ? ? 116.57 109.80 6.77 1.10 N 31 2 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 116.43 113.10 3.33 0.50 N 32 2 "C3'" A 3DR 6 ? ? "O3'" A 3DR 6 ? ? P A DG 7 ? ? 128.73 119.70 9.03 1.20 Y 33 2 "C5'" A DG 7 ? ? "C4'" A DG 7 ? ? "O4'" A DG 7 ? ? 118.14 109.80 8.34 1.10 N 34 2 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? "C2'" A DG 7 ? ? 100.45 105.90 -5.45 0.80 N 35 2 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.20 108.30 1.90 0.30 N 36 2 N7 A DG 7 ? ? C8 A DG 7 ? ? N9 A DG 7 ? ? 116.93 113.10 3.83 0.50 N 37 2 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.19 106.40 -3.21 0.40 N 38 2 "C5'" A DA 12 ? ? "C4'" A DA 12 ? ? "O4'" A DA 12 ? ? 116.83 109.80 7.03 1.10 N 39 2 N7 A DG 13 ? ? C8 A DG 13 ? ? N9 A DG 13 ? ? 116.23 113.10 3.13 0.50 N 40 2 N7 B DG 15 ? ? C8 B DG 15 ? ? N9 B DG 15 ? ? 116.81 113.10 3.71 0.50 N 41 2 C8 B DG 15 ? ? N9 B DG 15 ? ? C4 B DG 15 ? ? 103.85 106.40 -2.55 0.40 N 42 2 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 110.25 106.00 4.25 0.60 N 43 2 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 100.15 105.90 -5.75 0.80 N 44 2 C4 B DT 17 ? ? C5 B DT 17 ? ? C6 B DT 17 ? ? 121.67 118.00 3.67 0.60 N 45 2 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 123.27 119.00 4.27 0.60 N 46 2 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 115.05 122.90 -7.85 0.60 N 47 2 "C5'" B DT 18 ? ? "C4'" B DT 18 ? ? "O4'" B DT 18 ? ? 120.45 109.80 10.65 1.10 N 48 2 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 124.98 119.00 5.98 0.60 N 49 2 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 114.29 122.90 -8.61 0.60 N 50 2 "C3'" B DA 19 ? ? "O3'" B DA 19 ? ? P B 3DR 20 ? ? 127.17 119.70 7.47 1.20 Y 51 2 "C5'" B DA 21 ? ? "C4'" B DA 21 ? ? "O4'" B DA 21 ? ? 117.82 109.80 8.02 1.10 N 52 2 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? "C2'" B DA 21 ? ? 98.72 105.90 -7.18 0.80 N 53 2 N1 B DC 22 ? ? C2 B DC 22 ? ? O2 B DC 22 ? ? 122.75 118.90 3.85 0.60 N 54 2 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 117.50 113.80 3.70 0.50 N 55 2 C6 B DT 27 ? ? C5 B DT 27 ? ? C7 B DT 27 ? ? 119.26 122.90 -3.64 0.60 N 56 3 "C5'" A DA 2 ? ? "C4'" A DA 2 ? ? "O4'" A DA 2 ? ? 118.07 109.80 8.27 1.10 N 57 3 "C5'" A DG 3 ? ? "C4'" A DG 3 ? ? "O4'" A DG 3 ? ? 117.61 109.80 7.81 1.10 N 58 3 "C5'" A DC 4 ? ? "C4'" A DC 4 ? ? "O4'" A DC 4 ? ? 117.99 109.80 8.19 1.10 N 59 3 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 116.35 113.10 3.25 0.50 N 60 3 "C5'" A DG 7 ? ? "C4'" A DG 7 ? ? "O4'" A DG 7 ? ? 119.85 109.80 10.05 1.10 N 61 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? "C2'" A DG 7 ? ? 100.20 105.90 -5.70 0.80 N 62 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 113.16 108.30 4.86 0.30 N 63 3 N7 A DG 7 ? ? C8 A DG 7 ? ? N9 A DG 7 ? ? 116.72 113.10 3.62 0.50 N 64 3 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.33 106.40 -3.07 0.40 N 65 3 "C5'" A DA 12 ? ? "C4'" A DA 12 ? ? "O4'" A DA 12 ? ? 116.66 109.80 6.86 1.10 N 66 3 N7 A DG 13 ? ? C8 A DG 13 ? ? N9 A DG 13 ? ? 116.26 113.10 3.16 0.50 N 67 3 N7 B DG 15 ? ? C8 B DG 15 ? ? N9 B DG 15 ? ? 116.74 113.10 3.64 0.50 N 68 3 C8 B DG 15 ? ? N9 B DG 15 ? ? C4 B DG 15 ? ? 103.91 106.40 -2.49 0.40 N 69 3 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 110.18 106.00 4.18 0.60 N 70 3 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 99.44 105.90 -6.46 0.80 N 71 3 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 123.74 119.00 4.74 0.60 N 72 3 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 114.69 122.90 -8.21 0.60 N 73 3 "C5'" B DT 18 ? ? "C4'" B DT 18 ? ? "O4'" B DT 18 ? ? 120.13 109.80 10.33 1.10 N 74 3 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 124.98 119.00 5.98 0.60 N 75 3 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 114.32 122.90 -8.58 0.60 N 76 3 "C5'" B DA 21 ? ? "C4'" B DA 21 ? ? "O4'" B DA 21 ? ? 117.68 109.80 7.88 1.10 N 77 3 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? "C2'" B DA 21 ? ? 98.61 105.90 -7.29 0.80 N 78 3 N1 B DC 22 ? ? C2 B DC 22 ? ? O2 B DC 22 ? ? 122.53 118.90 3.63 0.60 N 79 3 "C5'" B DA 23 ? ? "C4'" B DA 23 ? ? "O4'" B DA 23 ? ? 116.51 109.80 6.71 1.10 N 80 3 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 117.07 113.80 3.27 0.50 N 81 3 "O4'" B DT 27 ? ? "C1'" B DT 27 ? ? N1 B DT 27 ? ? 110.15 108.30 1.85 0.30 N 82 3 N7 B DG 28 ? ? C8 B DG 28 ? ? N9 B DG 28 ? ? 116.13 113.10 3.03 0.50 N 83 4 "C5'" A DA 2 ? ? "C4'" A DA 2 ? ? "O4'" A DA 2 ? ? 118.28 109.80 8.48 1.10 N 84 4 "C5'" A DG 3 ? ? "C4'" A DG 3 ? ? "O4'" A DG 3 ? ? 117.96 109.80 8.16 1.10 N 85 4 "C5'" A DC 4 ? ? "C4'" A DC 4 ? ? "O4'" A DC 4 ? ? 117.89 109.80 8.09 1.10 N 86 4 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 116.30 113.10 3.20 0.50 N 87 4 "C5'" A DG 7 ? ? "C4'" A DG 7 ? ? "O4'" A DG 7 ? ? 119.41 109.80 9.61 1.10 N 88 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? "C2'" A DG 7 ? ? 100.31 105.90 -5.59 0.80 N 89 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.24 108.30 3.94 0.30 N 90 4 N7 A DG 7 ? ? C8 A DG 7 ? ? N9 A DG 7 ? ? 116.76 113.10 3.66 0.50 N 91 4 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.34 106.40 -3.06 0.40 N 92 4 "C5'" A DA 12 ? ? "C4'" A DA 12 ? ? "O4'" A DA 12 ? ? 116.85 109.80 7.05 1.10 N 93 4 N7 A DG 13 ? ? C8 A DG 13 ? ? N9 A DG 13 ? ? 116.23 113.10 3.13 0.50 N 94 4 N7 B DG 15 ? ? C8 B DG 15 ? ? N9 B DG 15 ? ? 116.78 113.10 3.68 0.50 N 95 4 C8 B DG 15 ? ? N9 B DG 15 ? ? C4 B DG 15 ? ? 103.85 106.40 -2.55 0.40 N 96 4 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 110.25 106.00 4.25 0.60 N 97 4 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 99.41 105.90 -6.49 0.80 N 98 4 C4 B DT 17 ? ? C5 B DT 17 ? ? C6 B DT 17 ? ? 121.70 118.00 3.70 0.60 N 99 4 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 123.59 119.00 4.59 0.60 N 100 4 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 114.70 122.90 -8.20 0.60 N 101 4 "C5'" B DT 18 ? ? "C4'" B DT 18 ? ? "O4'" B DT 18 ? ? 120.24 109.80 10.44 1.10 N 102 4 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 101.06 105.90 -4.84 0.80 N 103 4 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 124.95 119.00 5.95 0.60 N 104 4 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 114.33 122.90 -8.57 0.60 N 105 4 "C5'" B DA 21 ? ? "C4'" B DA 21 ? ? "O4'" B DA 21 ? ? 118.20 109.80 8.40 1.10 N 106 4 "O4'" B DA 21 ? ? "C1'" B DA 21 ? ? "C2'" B DA 21 ? ? 98.29 105.90 -7.61 0.80 N 107 4 N1 B DC 22 ? ? C2 B DC 22 ? ? O2 B DC 22 ? ? 122.61 118.90 3.71 0.60 N 108 4 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 117.26 113.80 3.46 0.50 N 109 4 C6 B DT 27 ? ? C5 B DT 27 ? ? C7 B DT 27 ? ? 119.25 122.90 -3.65 0.60 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C4'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id DT _pdbx_validate_chiral.auth_seq_id 8 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 4 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L2U _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L2U _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.contents ;unknown mM DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3'), unknown mM DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3'), 100% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '100% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id ;DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3')-1 ; . ? mM ? 1 ;DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3')-2 ; . ? mM ? 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H NOESY' 1 2 1 '2D 1H-1H COSY' 1 3 1 '2D DQF-COSY' 1 4 1 '2D 1H-1H TOCSY' # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2L2U _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 554 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # _pdbx_nmr_refine.entry_id 2L2U _pdbx_nmr_refine.method 'molecular dynamics, DGSA-distance geometry simulated annealing' _pdbx_nmr_refine.details 'Authors indicate chirality error at DT8 in model 1 due to flexibility of the DNA duplex in solution' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Brunger 'geometry optimization' X-PLOR 3.1 1 Brunger refinement X-PLOR 3.1 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3DR "O5'" O N N 1 3DR P P N N 2 3DR OP1 O N N 3 3DR OP2 O N N 4 3DR OP3 O N N 5 3DR "C2'" C N N 6 3DR "C5'" C N N 7 3DR "C4'" C N R 8 3DR "O4'" O N N 9 3DR "C1'" C N N 10 3DR "C3'" C N S 11 3DR "O3'" O N N 12 3DR HOP2 H N N 13 3DR HOP3 H N N 14 3DR "H2'" H N N 15 3DR "H2''" H N N 16 3DR "H5'" H N N 17 3DR "H5''" H N N 18 3DR "H4'1" H N N 19 3DR "H1'1" H N N 20 3DR "H1'2" H N N 21 3DR "H3'" H N N 22 3DR "HO3'" H N N 23 DA OP3 O N N 24 DA P P N N 25 DA OP1 O N N 26 DA OP2 O N N 27 DA "O5'" O N N 28 DA "C5'" C N N 29 DA "C4'" C N R 30 DA "O4'" O N N 31 DA "C3'" C N S 32 DA "O3'" O N N 33 DA "C2'" C N N 34 DA "C1'" C N R 35 DA N9 N Y N 36 DA C8 C Y N 37 DA N7 N Y N 38 DA C5 C Y N 39 DA C6 C Y N 40 DA N6 N N N 41 DA N1 N Y N 42 DA C2 C Y N 43 DA N3 N Y N 44 DA C4 C Y N 45 DA HOP3 H N N 46 DA HOP2 H N N 47 DA "H5'" H N N 48 DA "H5''" H N N 49 DA "H4'" H N N 50 DA "H3'" H N N 51 DA "HO3'" H N N 52 DA "H2'" H N N 53 DA "H2''" H N N 54 DA "H1'" H N N 55 DA H8 H N N 56 DA H61 H N N 57 DA H62 H N N 58 DA H2 H N N 59 DC OP3 O N N 60 DC P P N N 61 DC OP1 O N N 62 DC OP2 O N N 63 DC "O5'" O N N 64 DC "C5'" C N N 65 DC "C4'" C N R 66 DC "O4'" O N N 67 DC "C3'" C N S 68 DC "O3'" O N N 69 DC "C2'" C N N 70 DC "C1'" C N R 71 DC N1 N N N 72 DC C2 C N N 73 DC O2 O N N 74 DC N3 N N N 75 DC C4 C N N 76 DC N4 N N N 77 DC C5 C N N 78 DC C6 C N N 79 DC HOP3 H N N 80 DC HOP2 H N N 81 DC "H5'" H N N 82 DC "H5''" H N N 83 DC "H4'" H N N 84 DC "H3'" H N N 85 DC "HO3'" H N N 86 DC "H2'" H N N 87 DC "H2''" H N N 88 DC "H1'" H N N 89 DC H41 H N N 90 DC H42 H N N 91 DC H5 H N N 92 DC H6 H N N 93 DG OP3 O N N 94 DG P P N N 95 DG OP1 O N N 96 DG OP2 O N N 97 DG "O5'" O N N 98 DG "C5'" C N N 99 DG "C4'" C N R 100 DG "O4'" O N N 101 DG "C3'" C N S 102 DG "O3'" O N N 103 DG "C2'" C N N 104 DG "C1'" C N R 105 DG N9 N Y N 106 DG C8 C Y N 107 DG N7 N Y N 108 DG C5 C Y N 109 DG C6 C N N 110 DG O6 O N N 111 DG N1 N N N 112 DG C2 C N N 113 DG N2 N N N 114 DG N3 N N N 115 DG C4 C Y N 116 DG HOP3 H N N 117 DG HOP2 H N N 118 DG "H5'" H N N 119 DG "H5''" H N N 120 DG "H4'" H N N 121 DG "H3'" H N N 122 DG "HO3'" H N N 123 DG "H2'" H N N 124 DG "H2''" H N N 125 DG "H1'" H N N 126 DG H8 H N N 127 DG H1 H N N 128 DG H21 H N N 129 DG H22 H N N 130 DT OP3 O N N 131 DT P P N N 132 DT OP1 O N N 133 DT OP2 O N N 134 DT "O5'" O N N 135 DT "C5'" C N N 136 DT "C4'" C N R 137 DT "O4'" O N N 138 DT "C3'" C N S 139 DT "O3'" O N N 140 DT "C2'" C N N 141 DT "C1'" C N R 142 DT N1 N N N 143 DT C2 C N N 144 DT O2 O N N 145 DT N3 N N N 146 DT C4 C N N 147 DT O4 O N N 148 DT C5 C N N 149 DT C7 C N N 150 DT C6 C N N 151 DT HOP3 H N N 152 DT HOP2 H N N 153 DT "H5'" H N N 154 DT "H5''" H N N 155 DT "H4'" H N N 156 DT "H3'" H N N 157 DT "HO3'" H N N 158 DT "H2'" H N N 159 DT "H2''" H N N 160 DT "H1'" H N N 161 DT H3 H N N 162 DT H71 H N N 163 DT H72 H N N 164 DT H73 H N N 165 DT H6 H N N 166 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3DR "O5'" P sing N N 1 3DR "O5'" "C5'" sing N N 2 3DR P OP1 doub N N 3 3DR P OP2 sing N N 4 3DR P OP3 sing N N 5 3DR OP2 HOP2 sing N N 6 3DR OP3 HOP3 sing N N 7 3DR "C2'" "C1'" sing N N 8 3DR "C2'" "C3'" sing N N 9 3DR "C2'" "H2'" sing N N 10 3DR "C2'" "H2''" sing N N 11 3DR "C5'" "C4'" sing N N 12 3DR "C5'" "H5'" sing N N 13 3DR "C5'" "H5''" sing N N 14 3DR "C4'" "O4'" sing N N 15 3DR "C4'" "C3'" sing N N 16 3DR "C4'" "H4'1" sing N N 17 3DR "O4'" "C1'" sing N N 18 3DR "C1'" "H1'1" sing N N 19 3DR "C1'" "H1'2" sing N N 20 3DR "C3'" "O3'" sing N N 21 3DR "C3'" "H3'" sing N N 22 3DR "O3'" "HO3'" sing N N 23 DA OP3 P sing N N 24 DA OP3 HOP3 sing N N 25 DA P OP1 doub N N 26 DA P OP2 sing N N 27 DA P "O5'" sing N N 28 DA OP2 HOP2 sing N N 29 DA "O5'" "C5'" sing N N 30 DA "C5'" "C4'" sing N N 31 DA "C5'" "H5'" sing N N 32 DA "C5'" "H5''" sing N N 33 DA "C4'" "O4'" sing N N 34 DA "C4'" "C3'" sing N N 35 DA "C4'" "H4'" sing N N 36 DA "O4'" "C1'" sing N N 37 DA "C3'" "O3'" sing N N 38 DA "C3'" "C2'" sing N N 39 DA "C3'" "H3'" sing N N 40 DA "O3'" "HO3'" sing N N 41 DA "C2'" "C1'" sing N N 42 DA "C2'" "H2'" sing N N 43 DA "C2'" "H2''" sing N N 44 DA "C1'" N9 sing N N 45 DA "C1'" "H1'" sing N N 46 DA N9 C8 sing Y N 47 DA N9 C4 sing Y N 48 DA C8 N7 doub Y N 49 DA C8 H8 sing N N 50 DA N7 C5 sing Y N 51 DA C5 C6 sing Y N 52 DA C5 C4 doub Y N 53 DA C6 N6 sing N N 54 DA C6 N1 doub Y N 55 DA N6 H61 sing N N 56 DA N6 H62 sing N N 57 DA N1 C2 sing Y N 58 DA C2 N3 doub Y N 59 DA C2 H2 sing N N 60 DA N3 C4 sing Y N 61 DC OP3 P sing N N 62 DC OP3 HOP3 sing N N 63 DC P OP1 doub N N 64 DC P OP2 sing N N 65 DC P "O5'" sing N N 66 DC OP2 HOP2 sing N N 67 DC "O5'" "C5'" sing N N 68 DC "C5'" "C4'" sing N N 69 DC "C5'" "H5'" sing N N 70 DC "C5'" "H5''" sing N N 71 DC "C4'" "O4'" sing N N 72 DC "C4'" "C3'" sing N N 73 DC "C4'" "H4'" sing N N 74 DC "O4'" "C1'" sing N N 75 DC "C3'" "O3'" sing N N 76 DC "C3'" "C2'" sing N N 77 DC "C3'" "H3'" sing N N 78 DC "O3'" "HO3'" sing N N 79 DC "C2'" "C1'" sing N N 80 DC "C2'" "H2'" sing N N 81 DC "C2'" "H2''" sing N N 82 DC "C1'" N1 sing N N 83 DC "C1'" "H1'" sing N N 84 DC N1 C2 sing N N 85 DC N1 C6 sing N N 86 DC C2 O2 doub N N 87 DC C2 N3 sing N N 88 DC N3 C4 doub N N 89 DC C4 N4 sing N N 90 DC C4 C5 sing N N 91 DC N4 H41 sing N N 92 DC N4 H42 sing N N 93 DC C5 C6 doub N N 94 DC C5 H5 sing N N 95 DC C6 H6 sing N N 96 DG OP3 P sing N N 97 DG OP3 HOP3 sing N N 98 DG P OP1 doub N N 99 DG P OP2 sing N N 100 DG P "O5'" sing N N 101 DG OP2 HOP2 sing N N 102 DG "O5'" "C5'" sing N N 103 DG "C5'" "C4'" sing N N 104 DG "C5'" "H5'" sing N N 105 DG "C5'" "H5''" sing N N 106 DG "C4'" "O4'" sing N N 107 DG "C4'" "C3'" sing N N 108 DG "C4'" "H4'" sing N N 109 DG "O4'" "C1'" sing N N 110 DG "C3'" "O3'" sing N N 111 DG "C3'" "C2'" sing N N 112 DG "C3'" "H3'" sing N N 113 DG "O3'" "HO3'" sing N N 114 DG "C2'" "C1'" sing N N 115 DG "C2'" "H2'" sing N N 116 DG "C2'" "H2''" sing N N 117 DG "C1'" N9 sing N N 118 DG "C1'" "H1'" sing N N 119 DG N9 C8 sing Y N 120 DG N9 C4 sing Y N 121 DG C8 N7 doub Y N 122 DG C8 H8 sing N N 123 DG N7 C5 sing Y N 124 DG C5 C6 sing N N 125 DG C5 C4 doub Y N 126 DG C6 O6 doub N N 127 DG C6 N1 sing N N 128 DG N1 C2 sing N N 129 DG N1 H1 sing N N 130 DG C2 N2 sing N N 131 DG C2 N3 doub N N 132 DG N2 H21 sing N N 133 DG N2 H22 sing N N 134 DG N3 C4 sing N N 135 DT OP3 P sing N N 136 DT OP3 HOP3 sing N N 137 DT P OP1 doub N N 138 DT P OP2 sing N N 139 DT P "O5'" sing N N 140 DT OP2 HOP2 sing N N 141 DT "O5'" "C5'" sing N N 142 DT "C5'" "C4'" sing N N 143 DT "C5'" "H5'" sing N N 144 DT "C5'" "H5''" sing N N 145 DT "C4'" "O4'" sing N N 146 DT "C4'" "C3'" sing N N 147 DT "C4'" "H4'" sing N N 148 DT "O4'" "C1'" sing N N 149 DT "C3'" "O3'" sing N N 150 DT "C3'" "C2'" sing N N 151 DT "C3'" "H3'" sing N N 152 DT "O3'" "HO3'" sing N N 153 DT "C2'" "C1'" sing N N 154 DT "C2'" "H2'" sing N N 155 DT "C2'" "H2''" sing N N 156 DT "C1'" N1 sing N N 157 DT "C1'" "H1'" sing N N 158 DT N1 C2 sing N N 159 DT N1 C6 sing N N 160 DT C2 O2 doub N N 161 DT C2 N3 sing N N 162 DT N3 C4 sing N N 163 DT N3 H3 sing N N 164 DT C4 O4 doub N N 165 DT C4 C5 sing N N 166 DT C5 C7 sing N N 167 DT C5 C6 doub N N 168 DT C7 H71 sing N N 169 DT C7 H72 sing N N 170 DT C7 H73 sing N N 171 DT C6 H6 sing N N 172 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2L2U 'double helix' 2L2U 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 14 1_555 0.505 -0.188 0.002 -0.006 0.028 -2.243 1 A_DC1:DG28_B A 1 ? B 28 ? 19 1 1 A DA 2 1_555 B DT 13 1_555 0.333 -0.172 -0.064 -4.278 -7.723 -1.507 2 A_DA2:DT27_B A 2 ? B 27 ? 20 1 1 A DG 3 1_555 B DC 12 1_555 -0.593 -0.227 0.299 -0.962 0.204 -1.618 3 A_DG3:DC26_B A 3 ? B 26 ? 19 1 1 A DC 4 1_555 B DG 11 1_555 0.520 -0.245 0.240 2.957 1.956 -2.012 4 A_DC4:DG25_B A 4 ? B 25 ? 19 1 1 A DG 5 1_555 B DC 10 1_555 -0.880 -0.293 0.487 22.792 -3.826 0.389 5 A_DG5:DC24_B A 5 ? B 24 ? 19 1 1 A DG 7 1_555 B DC 8 1_555 -0.779 -0.276 0.034 2.275 -7.402 -2.975 6 A_DG7:DC22_B A 7 ? B 22 ? 19 1 1 A DT 8 1_555 B DA 7 1_555 -0.442 -0.094 0.061 -6.401 -13.157 -9.522 7 A_DT8:DA21_B A 8 ? B 21 ? 20 1 1 A DT 10 1_555 B DA 5 1_555 -0.304 -0.089 0.355 0.884 2.787 -0.682 8 A_DT10:DA19_B A 10 ? B 19 ? 20 1 1 A DA 11 1_555 B DT 4 1_555 -0.105 -0.127 0.118 5.876 -7.356 1.900 9 A_DA11:DT18_B A 11 ? B 18 ? 20 1 1 A DA 12 1_555 B DT 3 1_555 0.471 -0.141 -0.258 -0.169 -2.749 1.656 10 A_DA12:DT17_B A 12 ? B 17 ? 20 1 1 A DG 13 1_555 B DC 2 1_555 -0.606 -0.248 -0.028 4.991 -0.344 -2.455 11 A_DG13:DC16_B A 13 ? B 16 ? 19 1 1 A DC 14 1_555 B DG 1 1_555 0.817 -0.297 0.002 -0.202 -0.250 -1.932 12 A_DC14:DG15_B A 14 ? B 15 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 14 1_555 A DA 2 1_555 B DT 13 1_555 0.247 -0.623 3.049 2.195 3.669 40.178 -1.284 -0.129 2.992 5.323 -3.184 40.396 1 AA_DC1DA2:DT27DG28_BB A 1 ? B 28 ? A 2 ? B 27 ? 1 A DA 2 1_555 B DT 13 1_555 A DG 3 1_555 B DC 12 1_555 -0.271 -1.186 2.932 -3.847 -3.175 31.200 -1.638 -0.158 3.045 -5.856 7.095 31.587 2 AA_DA2DG3:DC26DT27_BB A 2 ? B 27 ? A 3 ? B 26 ? 1 A DG 3 1_555 B DC 12 1_555 A DC 4 1_555 B DG 11 1_555 -0.144 -0.615 3.054 0.251 -0.105 41.438 -0.859 0.228 3.055 -0.149 -0.355 41.439 3 AA_DG3DC4:DG25DC26_BB A 3 ? B 26 ? A 4 ? B 25 ? 1 A DC 4 1_555 B DG 11 1_555 A DG 5 1_555 B DC 10 1_555 -0.078 -0.766 2.316 -3.171 8.319 26.727 -2.891 -0.341 1.988 17.394 6.630 28.146 4 AA_DC4DG5:DC24DG25_BB A 4 ? B 25 ? A 5 ? B 24 ? 1 A DG 5 1_555 B DC 10 1_555 A DG 7 1_555 B DC 8 1_555 -0.292 -1.646 6.416 -4.690 8.765 69.611 -2.031 -0.068 6.205 7.638 4.087 70.228 5 AA_DG5DG7:DC22DC24_BB A 5 ? B 24 ? A 7 ? B 22 ? 1 A DG 7 1_555 B DC 8 1_555 A DT 8 1_555 B DA 7 1_555 0.098 -0.762 3.259 2.109 -1.374 38.058 -0.992 0.118 3.284 -2.104 -3.230 38.138 6 AA_DG7DT8:DA21DC22_BB A 7 ? B 22 ? A 8 ? B 21 ? 1 A DT 8 1_555 B DA 7 1_555 A DT 10 1_555 B DA 5 1_555 0.807 -1.230 5.990 -2.933 3.284 67.459 -1.335 -0.930 5.896 2.954 2.638 67.586 7 AA_DT8DT10:DA19DA21_BB A 8 ? B 21 ? A 10 ? B 19 ? 1 A DT 10 1_555 B DA 5 1_555 A DA 11 1_555 B DT 4 1_555 0.398 -1.070 2.764 2.731 4.471 36.358 -2.206 -0.322 2.640 7.119 -4.349 36.721 8 AA_DT10DA11:DT18DA19_BB A 10 ? B 19 ? A 11 ? B 18 ? 1 A DA 11 1_555 B DT 4 1_555 A DA 12 1_555 B DT 3 1_555 -0.292 -1.057 3.305 1.543 -3.183 36.869 -1.228 0.671 3.366 -5.019 -2.432 37.032 9 AA_DA11DA12:DT17DT18_BB A 11 ? B 18 ? A 12 ? B 17 ? 1 A DA 12 1_555 B DT 3 1_555 A DG 13 1_555 B DC 2 1_555 -0.169 -1.267 2.913 -0.960 6.213 27.183 -3.889 0.157 2.570 13.000 2.009 27.888 10 AA_DA12DG13:DC16DT17_BB A 12 ? B 17 ? A 13 ? B 16 ? 1 A DG 13 1_555 B DC 2 1_555 A DC 14 1_555 B DG 1 1_555 -0.196 -0.693 3.286 -0.744 -4.165 45.042 -0.524 0.187 3.336 -5.422 0.968 45.229 11 AA_DG13DC14:DG15DC16_BB A 13 ? B 16 ? A 14 ? B 15 ? # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _atom_sites.entry_id 2L2U _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_