data_2MZQ # _entry.id 2MZQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_code _database_2.database_id _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB104239 RCSB ? ? 2MZQ PDB pdb_00002mzq 10.2210/pdb2mzq/pdb 25496 BMRB ? ? D_1000104239 WWPDB ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 25496 BMRB unspecified . 2MZR PDB unspecified . 2MZS PDB unspecified . 2MZT PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MZQ _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2015-02-23 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Martinez-Lumbreras, S.' 1 'Seraphin, B.' 2 'Perez-Canadillas, J.' 3 # _citation.id primary _citation.title 'Gbp2 interacts with THO/TREX through a novel type of RRM domain.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 44 _citation.page_first 437 _citation.page_last 448 _citation.year 2016 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26602689 _citation.pdbx_database_id_DOI 10.1093/nar/gkv1303 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Martinez-Lumbreras, S.' 1 ? primary 'Taverniti, V.' 2 ? primary 'Zorrilla, S.' 3 ? primary 'Seraphin, B.' 4 ? primary 'Perez-Canadillas, J.M.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Single-strand telomeric DNA-binding protein GBP2' _entity.formula_weight 11094.204 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Third RRM domain (UNP residues 329-427)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'G-strand-binding protein 2, RAP1 localization factor 6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHIDETAAKFTEGVNPGGDRNCFIYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCI QKLNNYNYGGCSLQISYARRD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHIDETAAKFTEGVNPGGDRNCFIYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCI QKLNNYNYGGCSLQISYARRD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 ILE n 1 5 ASP n 1 6 GLU n 1 7 THR n 1 8 ALA n 1 9 ALA n 1 10 LYS n 1 11 PHE n 1 12 THR n 1 13 GLU n 1 14 GLY n 1 15 VAL n 1 16 ASN n 1 17 PRO n 1 18 GLY n 1 19 GLY n 1 20 ASP n 1 21 ARG n 1 22 ASN n 1 23 CYS n 1 24 PHE n 1 25 ILE n 1 26 TYR n 1 27 CYS n 1 28 SER n 1 29 ASN n 1 30 LEU n 1 31 PRO n 1 32 PHE n 1 33 SER n 1 34 THR n 1 35 ALA n 1 36 ARG n 1 37 SER n 1 38 ASP n 1 39 LEU n 1 40 PHE n 1 41 ASP n 1 42 LEU n 1 43 PHE n 1 44 GLY n 1 45 PRO n 1 46 ILE n 1 47 GLY n 1 48 LYS n 1 49 ILE n 1 50 ASN n 1 51 ASN n 1 52 ALA n 1 53 GLU n 1 54 LEU n 1 55 LYS n 1 56 PRO n 1 57 GLN n 1 58 GLU n 1 59 ASN n 1 60 GLY n 1 61 GLN n 1 62 PRO n 1 63 THR n 1 64 GLY n 1 65 VAL n 1 66 ALA n 1 67 VAL n 1 68 VAL n 1 69 GLU n 1 70 TYR n 1 71 GLU n 1 72 ASN n 1 73 LEU n 1 74 VAL n 1 75 ASP n 1 76 ALA n 1 77 ASP n 1 78 PHE n 1 79 CYS n 1 80 ILE n 1 81 GLN n 1 82 LYS n 1 83 LEU n 1 84 ASN n 1 85 ASN n 1 86 TYR n 1 87 ASN n 1 88 TYR n 1 89 GLY n 1 90 GLY n 1 91 CYS n 1 92 SER n 1 93 LEU n 1 94 GLN n 1 95 ILE n 1 96 SER n 1 97 TYR n 1 98 ALA n 1 99 ARG n 1 100 ARG n 1 101 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GBP2, RLF6, YCL011C, YCL11C' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GBP2_YEAST _struct_ref.pdbx_db_accession P25555 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HIDETAAKFTEGVNPGGDRNCFIYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCIQK LNNYNYGGCSLQISYARRD ; _struct_ref.pdbx_align_begin 329 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MZQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P25555 _struct_ref_seq.db_align_beg 329 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 427 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 329 _struct_ref_seq.pdbx_auth_seq_align_end 427 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MZQ GLY A 1 ? UNP P25555 ? ? 'expression tag' 327 1 1 2MZQ SER A 2 ? UNP P25555 ? ? 'expression tag' 328 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 2 '2D 1H-13C HSQC' 1 3 1 '2D 1H-1H NOESY' 1 4 1 '2D 1H-1H TOCSY' 1 5 1 '3D HNCA' 1 6 1 '3D HNCO' 1 7 1 '3D HNCACB' 1 8 1 '3D CBCA(CO)NH' 1 9 2 '3D HCCH-TOCSY' 1 10 2 '2D 1H-1H TOCSY' 1 11 2 '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.8 mM protein, 25 mM potassium phosphate, 25 mM sodium chloride, 0.1 mM DTT, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.8 mM protein, 25 mM potassium phosphate, 25 mM sodium chloride, 0.1 mM DTT, 100% D2O' 2 '100% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MZQ _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MZQ _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 1 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman' refinement Amber ? 2 'Bruker Biospin' collection TopSpin ? 3 CCPN 'chemical shift assignment' 'CcpNmr Analysis' ? 4 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MZQ _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MZQ _struct.title 'NMR structure of the RRM3 domain of Gbp2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MZQ _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text 'RRM, RNA binding domain, Gbp2, THO/TREX, RNA binding protein' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 5 ? PHE A 11 ? ASP A 331 PHE A 337 1 ? 7 HELX_P HELX_P2 2 ALA A 35 ? SER A 37 ? ALA A 361 SER A 363 5 ? 3 HELX_P HELX_P3 3 ASP A 38 ? PHE A 43 ? ASP A 364 PHE A 369 1 ? 6 HELX_P HELX_P4 4 ASN A 72 ? LEU A 83 ? ASN A 398 LEU A 409 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 49 ? LEU A 54 ? ILE A 375 LEU A 380 A 2 VAL A 65 ? TYR A 70 ? VAL A 391 TYR A 396 A 3 PHE A 24 ? SER A 28 ? PHE A 350 SER A 354 A 4 GLN A 94 ? TYR A 97 ? GLN A 420 TYR A 423 B 1 ASN A 87 ? TYR A 88 ? ASN A 413 TYR A 414 B 2 CYS A 91 ? SER A 92 ? CYS A 417 SER A 418 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 53 ? N GLU A 379 O VAL A 67 ? O VAL A 393 A 2 3 O VAL A 68 ? O VAL A 394 N ILE A 25 ? N ILE A 351 A 3 4 N SER A 28 ? N SER A 354 O GLN A 94 ? O GLN A 420 B 1 2 N TYR A 88 ? N TYR A 414 O CYS A 91 ? O CYS A 417 # _atom_sites.entry_id 2MZQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 327 327 GLY GLY A . n A 1 2 SER 2 328 328 SER SER A . n A 1 3 HIS 3 329 329 HIS HIS A . n A 1 4 ILE 4 330 330 ILE ILE A . n A 1 5 ASP 5 331 331 ASP ASP A . n A 1 6 GLU 6 332 332 GLU GLU A . n A 1 7 THR 7 333 333 THR THR A . n A 1 8 ALA 8 334 334 ALA ALA A . n A 1 9 ALA 9 335 335 ALA ALA A . n A 1 10 LYS 10 336 336 LYS LYS A . n A 1 11 PHE 11 337 337 PHE PHE A . n A 1 12 THR 12 338 338 THR THR A . n A 1 13 GLU 13 339 339 GLU GLU A . n A 1 14 GLY 14 340 340 GLY GLY A . n A 1 15 VAL 15 341 341 VAL VAL A . n A 1 16 ASN 16 342 342 ASN ASN A . n A 1 17 PRO 17 343 343 PRO PRO A . n A 1 18 GLY 18 344 344 GLY GLY A . n A 1 19 GLY 19 345 345 GLY GLY A . n A 1 20 ASP 20 346 346 ASP ASP A . n A 1 21 ARG 21 347 347 ARG ARG A . n A 1 22 ASN 22 348 348 ASN ASN A . n A 1 23 CYS 23 349 349 CYS CYS A . n A 1 24 PHE 24 350 350 PHE PHE A . n A 1 25 ILE 25 351 351 ILE ILE A . n A 1 26 TYR 26 352 352 TYR TYR A . n A 1 27 CYS 27 353 353 CYS CYS A . n A 1 28 SER 28 354 354 SER SER A . n A 1 29 ASN 29 355 355 ASN ASN A . n A 1 30 LEU 30 356 356 LEU LEU A . n A 1 31 PRO 31 357 357 PRO PRO A . n A 1 32 PHE 32 358 358 PHE PHE A . n A 1 33 SER 33 359 359 SER SER A . n A 1 34 THR 34 360 360 THR THR A . n A 1 35 ALA 35 361 361 ALA ALA A . n A 1 36 ARG 36 362 362 ARG ARG A . n A 1 37 SER 37 363 363 SER SER A . n A 1 38 ASP 38 364 364 ASP ASP A . n A 1 39 LEU 39 365 365 LEU LEU A . n A 1 40 PHE 40 366 366 PHE PHE A . n A 1 41 ASP 41 367 367 ASP ASP A . n A 1 42 LEU 42 368 368 LEU LEU A . n A 1 43 PHE 43 369 369 PHE PHE A . n A 1 44 GLY 44 370 370 GLY GLY A . n A 1 45 PRO 45 371 371 PRO PRO A . n A 1 46 ILE 46 372 372 ILE ILE A . n A 1 47 GLY 47 373 373 GLY GLY A . n A 1 48 LYS 48 374 374 LYS LYS A . n A 1 49 ILE 49 375 375 ILE ILE A . n A 1 50 ASN 50 376 376 ASN ASN A . n A 1 51 ASN 51 377 377 ASN ASN A . n A 1 52 ALA 52 378 378 ALA ALA A . n A 1 53 GLU 53 379 379 GLU GLU A . n A 1 54 LEU 54 380 380 LEU LEU A . n A 1 55 LYS 55 381 381 LYS LYS A . n A 1 56 PRO 56 382 382 PRO PRO A . n A 1 57 GLN 57 383 383 GLN GLN A . n A 1 58 GLU 58 384 384 GLU GLU A . n A 1 59 ASN 59 385 385 ASN ASN A . n A 1 60 GLY 60 386 386 GLY GLY A . n A 1 61 GLN 61 387 387 GLN GLN A . n A 1 62 PRO 62 388 388 PRO PRO A . n A 1 63 THR 63 389 389 THR THR A . n A 1 64 GLY 64 390 390 GLY GLY A . n A 1 65 VAL 65 391 391 VAL VAL A . n A 1 66 ALA 66 392 392 ALA ALA A . n A 1 67 VAL 67 393 393 VAL VAL A . n A 1 68 VAL 68 394 394 VAL VAL A . n A 1 69 GLU 69 395 395 GLU GLU A . n A 1 70 TYR 70 396 396 TYR TYR A . n A 1 71 GLU 71 397 397 GLU GLU A . n A 1 72 ASN 72 398 398 ASN ASN A . n A 1 73 LEU 73 399 399 LEU LEU A . n A 1 74 VAL 74 400 400 VAL VAL A . n A 1 75 ASP 75 401 401 ASP ASP A . n A 1 76 ALA 76 402 402 ALA ALA A . n A 1 77 ASP 77 403 403 ASP ASP A . n A 1 78 PHE 78 404 404 PHE PHE A . n A 1 79 CYS 79 405 405 CYS CYS A . n A 1 80 ILE 80 406 406 ILE ILE A . n A 1 81 GLN 81 407 407 GLN GLN A . n A 1 82 LYS 82 408 408 LYS LYS A . n A 1 83 LEU 83 409 409 LEU LEU A . n A 1 84 ASN 84 410 410 ASN ASN A . n A 1 85 ASN 85 411 411 ASN ASN A . n A 1 86 TYR 86 412 412 TYR TYR A . n A 1 87 ASN 87 413 413 ASN ASN A . n A 1 88 TYR 88 414 414 TYR TYR A . n A 1 89 GLY 89 415 415 GLY GLY A . n A 1 90 GLY 90 416 416 GLY GLY A . n A 1 91 CYS 91 417 417 CYS CYS A . n A 1 92 SER 92 418 418 SER SER A . n A 1 93 LEU 93 419 419 LEU LEU A . n A 1 94 GLN 94 420 420 GLN GLN A . n A 1 95 ILE 95 421 421 ILE ILE A . n A 1 96 SER 96 422 422 SER SER A . n A 1 97 TYR 97 423 423 TYR TYR A . n A 1 98 ALA 98 424 424 ALA ALA A . n A 1 99 ARG 99 425 425 ARG ARG A . n A 1 100 ARG 100 426 426 ARG ARG A . n A 1 101 ASP 101 427 427 ASP ASP A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-02 2 'Structure model' 1 1 2015-12-09 3 'Structure model' 1 2 2016-01-27 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_nmr_spectrometer 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_pdbx_nmr_spectrometer.model' 6 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id protein-1 0.8 ? mM ? 1 'potassium phosphate-2' 25 ? mM ? 1 'sodium chloride-3' 25 ? mM ? 1 DTT-4 0.1 ? mM ? 1 protein-5 0.8 ? mM ? 2 'potassium phosphate-6' 25 ? mM ? 2 'sodium chloride-7' 25 ? mM ? 2 DTT-8 0.1 ? mM ? 2 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.69 120.30 3.39 0.50 N 2 1 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.64 120.30 -3.66 0.50 N 3 5 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.69 120.30 3.39 0.50 N 4 5 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.64 120.30 -3.66 0.50 N 5 6 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.79 120.30 3.49 0.50 N 6 6 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.30 120.30 -4.00 0.50 N 7 7 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.66 120.30 3.36 0.50 N 8 7 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.52 120.30 -3.78 0.50 N 9 8 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.60 120.30 3.30 0.50 N 10 8 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.60 120.30 -3.70 0.50 N 11 9 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.35 120.30 3.05 0.50 N 12 9 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 117.14 120.30 -3.16 0.50 N 13 10 CB A TYR 423 ? ? CG A TYR 423 ? ? CD1 A TYR 423 ? ? 116.95 121.00 -4.05 0.60 N 14 12 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.64 120.30 3.34 0.50 N 15 12 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.61 120.30 -3.69 0.50 N 16 13 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.70 120.30 3.40 0.50 N 17 13 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.62 120.30 -3.68 0.50 N 18 14 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 124.16 120.30 3.86 0.50 N 19 14 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.70 120.30 -3.60 0.50 N 20 15 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.68 120.30 3.38 0.50 N 21 15 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.43 120.30 -3.87 0.50 N 22 17 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.73 120.30 3.43 0.50 N 23 17 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.51 120.30 -3.79 0.50 N 24 18 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 124.02 120.30 3.72 0.50 N 25 18 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 115.83 120.30 -4.47 0.50 N 26 19 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.65 120.30 3.35 0.50 N 27 19 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.42 120.30 -3.88 0.50 N 28 20 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH1 A ARG 362 ? ? 123.83 120.30 3.53 0.50 N 29 20 NE A ARG 362 ? ? CZ A ARG 362 ? ? NH2 A ARG 362 ? ? 116.72 120.30 -3.58 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 330 ? ? -160.34 -46.00 2 1 ASP A 331 ? ? -151.54 4.70 3 1 ASN A 348 ? ? -74.77 -78.15 4 1 CYS A 349 ? ? 161.65 -32.60 5 1 ASN A 410 ? ? -75.45 28.88 6 1 ASN A 411 ? ? -160.41 9.33 7 2 ILE A 330 ? ? -165.19 -47.31 8 2 ASN A 348 ? ? -77.21 -78.95 9 2 CYS A 349 ? ? 162.56 -28.65 10 2 ASN A 410 ? ? -77.48 34.47 11 2 ASN A 411 ? ? -174.49 12.76 12 3 SER A 328 ? ? -174.54 -48.18 13 3 ASP A 331 ? ? 68.92 -33.67 14 3 ASP A 346 ? ? -148.90 44.20 15 3 ARG A 347 ? ? 63.34 61.91 16 3 ASN A 348 ? ? -103.51 -62.48 17 3 CYS A 349 ? ? 166.06 -25.44 18 3 LYS A 374 ? ? -110.86 78.92 19 3 ASN A 410 ? ? -64.82 13.33 20 3 ASN A 411 ? ? -157.66 12.53 21 4 ILE A 330 ? ? -144.40 -11.48 22 4 CYS A 349 ? ? 158.51 -44.85 23 4 ALA A 378 ? ? -170.46 138.05 24 5 ILE A 330 ? ? -160.77 -47.21 25 5 ASP A 331 ? ? -152.55 -1.53 26 5 ASN A 348 ? ? -81.30 -74.63 27 5 CYS A 349 ? ? 156.89 -22.39 28 6 ASP A 346 ? ? -103.51 72.60 29 6 ARG A 347 ? ? 60.79 63.91 30 6 ASN A 348 ? ? -89.65 -153.51 31 6 ASN A 411 ? ? 166.18 -14.01 32 7 SER A 328 ? ? -165.40 -47.70 33 7 ASN A 348 ? ? -74.70 -77.38 34 7 CYS A 349 ? ? 160.42 -27.07 35 7 ASN A 411 ? ? 166.50 -14.41 36 8 ASP A 331 ? ? -26.28 -48.00 37 8 ARG A 347 ? ? 73.29 67.83 38 8 ASN A 348 ? ? -99.94 -149.40 39 8 ASN A 410 ? ? -77.48 35.57 40 8 ASN A 411 ? ? -171.00 9.70 41 9 SER A 328 ? ? -160.75 -162.66 42 9 ASN A 348 ? ? -92.00 -142.63 43 9 LYS A 374 ? ? -101.81 78.48 44 11 ILE A 330 ? ? -146.94 25.41 45 11 ARG A 347 ? ? 61.90 61.21 46 11 ASN A 348 ? ? -88.70 -157.06 47 11 ALA A 378 ? ? -171.85 138.50 48 11 ASN A 410 ? ? -76.97 35.64 49 11 ASN A 411 ? ? -173.52 12.38 50 12 ASP A 346 ? ? -100.04 65.03 51 12 ARG A 347 ? ? 64.27 63.07 52 12 ASN A 348 ? ? -94.56 -64.06 53 12 CYS A 349 ? ? 155.02 -26.84 54 12 ASN A 411 ? ? 165.95 -14.03 55 13 ILE A 330 ? ? -145.68 27.78 56 13 ARG A 347 ? ? -51.13 80.86 57 13 ASN A 348 ? ? -105.76 -142.81 58 13 ASN A 410 ? ? -77.46 35.54 59 13 ASN A 411 ? ? -170.80 11.33 60 14 ASP A 331 ? ? -156.78 13.24 61 14 ASP A 346 ? ? -154.16 23.18 62 14 ARG A 347 ? ? 59.06 72.68 63 14 ASN A 348 ? ? -97.73 -75.21 64 14 CYS A 349 ? ? 174.10 -25.01 65 14 ALA A 378 ? ? -170.06 142.70 66 14 ASN A 410 ? ? -77.39 36.71 67 14 ASN A 411 ? ? -171.69 11.27 68 15 SER A 328 ? ? -150.26 15.70 69 15 ASP A 331 ? ? 68.21 -26.13 70 15 ASP A 346 ? ? 67.09 -172.94 71 15 ARG A 347 ? ? -67.95 85.62 72 15 ASN A 348 ? ? -97.77 -66.72 73 15 CYS A 349 ? ? 150.74 -27.68 74 15 ASN A 411 ? ? 161.52 -11.74 75 16 ILE A 330 ? ? -136.88 -60.26 76 16 ASP A 331 ? ? -170.36 -36.02 77 16 ASP A 346 ? ? 67.61 104.98 78 16 ASN A 348 ? ? -99.63 -66.11 79 16 CYS A 349 ? ? 165.80 -21.49 80 16 ASN A 411 ? ? 159.49 -12.48 81 16 ALA A 424 ? ? -66.32 -179.28 82 16 ARG A 425 ? ? -122.32 -85.00 83 17 ILE A 330 ? ? -141.09 -48.27 84 17 ASP A 331 ? ? -159.45 0.31 85 17 ASN A 348 ? ? -99.53 -136.52 86 17 ASN A 411 ? ? 163.96 -12.53 87 18 HIS A 329 ? ? -163.37 -61.69 88 18 ILE A 330 ? ? -138.15 -63.30 89 18 ASP A 346 ? ? -168.14 109.13 90 18 CYS A 349 ? ? 110.19 -3.23 91 18 LYS A 374 ? ? -101.24 71.56 92 18 ASN A 410 ? ? -76.73 28.70 93 18 ASN A 411 ? ? -158.83 9.53 94 19 SER A 328 ? ? 72.33 165.46 95 19 HIS A 329 ? ? 67.75 107.48 96 19 ILE A 330 ? ? -158.88 -30.54 97 19 CYS A 349 ? ? 98.39 -9.88 98 19 ASN A 410 ? ? -77.34 34.95 99 19 ASN A 411 ? ? -174.10 12.92 100 20 ILE A 330 ? ? -155.99 -36.88 101 20 ARG A 347 ? ? 66.79 64.06 102 20 ASN A 348 ? ? -96.75 -63.06 103 20 CYS A 349 ? ? 157.33 -28.30 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 14 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 345 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASP _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 346 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -149.12 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 414 ? ? 0.084 'SIDE CHAIN' 2 2 TYR A 414 ? ? 0.082 'SIDE CHAIN' 3 3 TYR A 414 ? ? 0.091 'SIDE CHAIN' 4 4 TYR A 414 ? ? 0.089 'SIDE CHAIN' 5 11 ARG A 362 ? ? 0.078 'SIDE CHAIN' 6 12 TYR A 414 ? ? 0.076 'SIDE CHAIN' 7 13 TYR A 414 ? ? 0.080 'SIDE CHAIN' 8 14 TYR A 414 ? ? 0.090 'SIDE CHAIN' 9 18 ARG A 347 ? ? 0.151 'SIDE CHAIN' #