data_2NCQ # _entry.id 2NCQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_code _database_2.database_id _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB104700 RCSB ? ? 2NCQ PDB pdb_00002ncq 10.2210/pdb2ncq/pdb 26032 BMRB ? ? D_1000104700 WWPDB ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2NCR PDB . unspecified 26032 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2NCQ _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2016-04-12 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kumar, A.' 1 'Mishra, S.K.' 2 # _citation.id primary _citation.title ;Structural insights reveal the dynamics of the repeating r(CGG) motif found in Fragile X Syndrome and Fragile-X associated tremor/ataxia syndrome (FXTAS) ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mishra, S.K.' 1 ? primary 'Kumar, A.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "RNA_(5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3')" _entity.formula_weight 2901.799 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code CCGCGGCGG _entity_poly.pdbx_seq_one_letter_code_can CCGCGGCGG _entity_poly.pdbx_strand_id S,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 C n 1 3 G n 1 4 C n 1 5 G n 1 6 G n 1 7 C n 1 8 G n 1 9 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2NCQ _struct_ref.pdbx_db_accession 2NCQ _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2NCQ S 1 ? 9 ? 2NCQ 1 ? 9 ? 1 9 2 1 2NCQ A 1 ? 9 ? 2NCQ 1 ? 9 ? 1 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 # _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.solution_id 1 _pdbx_nmr_exptl.type '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 318 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;1.5 mM RNA (5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3'), 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 400 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2NCQ _pdbx_nmr_refine.method 'DGSA-distance geometry simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2NCQ _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2NCQ _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' 'chemical shift assignment' TopSpin ? 1 Goddard 'chemical shift assignment' Sparky ? 2 Goddard 'peak picking' Sparky ? 3 'Accelrys Software Inc.' 'geometry optimization' Discover ? 4 ? refinement Discover ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2NCQ _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2NCQ _struct.title ;Structural insights of r(CGG) motif found in Fragile X Syndrome and Fragile-X associated tremor/ataxia syndrome (FXTAS) at 45 degree C ; _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NCQ _struct_keywords.pdbx_keywords RNA _struct_keywords.text RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 B G 9 N1 ? ? S C 1 A G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 B G 9 O6 ? ? S C 1 A G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 B G 9 N2 ? ? S C 1 A G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 B G 8 N1 ? ? S C 2 A G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 B G 8 O6 ? ? S C 2 A G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 B G 8 N2 ? ? S C 2 A G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 7 N3 ? ? S G 3 A C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 7 O2 ? ? S G 3 A C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 7 N4 ? ? S G 3 A C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 B G 6 N1 ? ? S C 4 A G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 B G 6 O6 ? ? S C 4 A G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 B G 6 N2 ? ? S C 4 A G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N7 ? ? ? 1_555 B G 5 N2 ? ? S G 5 A G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A G 5 O6 ? ? ? 1_555 B G 5 N1 ? ? S G 5 A G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A G 6 N1 ? ? ? 1_555 B C 4 N3 ? ? S G 6 A C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N2 ? ? ? 1_555 B C 4 O2 ? ? S G 6 A C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 O6 ? ? ? 1_555 B C 4 N4 ? ? S G 6 A C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 3 N1 ? ? S C 7 A G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 3 O6 ? ? S C 7 A G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 3 N2 ? ? S C 7 A G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 2 N3 ? ? S G 8 A C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 2 O2 ? ? S G 8 A C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 2 N4 ? ? S G 8 A C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N1 ? ? ? 1_555 B C 1 N3 ? ? S G 9 A C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 N2 ? ? ? 1_555 B C 1 O2 ? ? S G 9 A C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 9 O6 ? ? ? 1_555 B C 1 N4 ? ? S G 9 A C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2NCQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C S . n A 1 2 C 2 2 2 C C S . n A 1 3 G 3 3 3 G G S . n A 1 4 C 4 4 4 C C S . n A 1 5 G 5 5 5 G G S . n A 1 6 G 6 6 6 G G S . n A 1 7 C 7 7 7 C C S . n A 1 8 G 8 8 8 G G S . n A 1 9 G 9 9 9 G G S . n B 1 1 C 1 1 1 C C A . n B 1 2 C 2 2 2 C C A . n B 1 3 G 3 3 3 G G A . n B 1 4 C 4 4 4 C C A . n B 1 5 G 5 5 5 G G A . n B 1 6 G 6 6 6 G G A . n B 1 7 C 7 7 7 C C A . n B 1 8 G 8 8 8 G G A . n B 1 9 G 9 9 9 G G A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-19 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_nmr_exptl_sample.component ;RNA (5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3')-1 ; _pdbx_nmr_exptl_sample.concentration 1.5 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling ? _pdbx_nmr_exptl_sample.solution_id 1 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N1 S C 1 ? ? C6 S C 1 ? ? 1.327 1.367 -0.040 0.006 N 2 1 C4 S C 1 ? ? C5 S C 1 ? ? 1.346 1.425 -0.079 0.008 N 3 1 C5 S C 1 ? ? C6 S C 1 ? ? 1.397 1.339 0.058 0.008 N 4 1 P S C 2 ? ? "O5'" S C 2 ? ? 1.503 1.593 -0.090 0.010 N 5 1 P S G 3 ? ? "O5'" S G 3 ? ? 1.513 1.593 -0.080 0.010 N 6 1 "C3'" S G 3 ? ? "C2'" S G 3 ? ? 1.599 1.525 0.074 0.011 N 7 1 "C2'" S G 3 ? ? "C1'" S G 3 ? ? 1.455 1.526 -0.071 0.008 N 8 1 N1 S G 3 ? ? C2 S G 3 ? ? 1.300 1.373 -0.073 0.008 N 9 1 N7 S G 3 ? ? C8 S G 3 ? ? 1.350 1.305 0.045 0.006 N 10 1 "O3'" S G 3 ? ? P S C 4 ? ? 1.528 1.607 -0.079 0.012 Y 11 1 P S C 4 ? ? OP2 S C 4 ? ? 1.631 1.485 0.146 0.017 N 12 1 N1 S C 4 ? ? C6 S C 4 ? ? 1.304 1.367 -0.063 0.006 N 13 1 "O3'" S C 4 ? ? P S G 5 ? ? 1.534 1.607 -0.073 0.012 Y 14 1 C4 S G 5 ? ? C5 S G 5 ? ? 1.447 1.379 0.068 0.007 N 15 1 C5 S G 5 ? ? C6 S G 5 ? ? 1.482 1.419 0.063 0.010 N 16 1 C8 S G 5 ? ? N9 S G 5 ? ? 1.441 1.374 0.067 0.007 N 17 1 C4 S G 6 ? ? C5 S G 6 ? ? 1.452 1.379 0.073 0.007 N 18 1 N7 S G 6 ? ? C8 S G 6 ? ? 1.341 1.305 0.036 0.006 N 19 1 C8 S G 6 ? ? N9 S G 6 ? ? 1.329 1.374 -0.045 0.007 N 20 1 "O3'" S G 6 ? ? P S C 7 ? ? 1.531 1.607 -0.076 0.012 Y 21 1 P S C 7 ? ? OP2 S C 7 ? ? 1.589 1.485 0.104 0.017 N 22 1 C4 S C 7 ? ? C5 S C 7 ? ? 1.374 1.425 -0.051 0.008 N 23 1 N7 S G 8 ? ? C8 S G 8 ? ? 1.367 1.305 0.062 0.006 N 24 1 C8 S G 8 ? ? N9 S G 8 ? ? 1.297 1.374 -0.077 0.007 N 25 1 C5 S G 9 ? ? N7 S G 9 ? ? 1.329 1.388 -0.059 0.006 N 26 1 C4 A C 1 ? ? N4 A C 1 ? ? 1.398 1.335 0.063 0.009 N 27 1 N1 A C 2 ? ? C6 A C 2 ? ? 1.302 1.367 -0.065 0.006 N 28 1 C5 A C 2 ? ? C6 A C 2 ? ? 1.394 1.339 0.055 0.008 N 29 1 "C4'" A G 3 ? ? "C3'" A G 3 ? ? 1.442 1.521 -0.079 0.010 N 30 1 "C3'" A G 3 ? ? "C2'" A G 3 ? ? 1.431 1.523 -0.092 0.011 N 31 1 C6 A G 3 ? ? N1 A G 3 ? ? 1.444 1.391 0.053 0.007 N 32 1 N7 A G 3 ? ? C8 A G 3 ? ? 1.382 1.305 0.077 0.006 N 33 1 "C2'" A C 4 ? ? "C1'" A C 4 ? ? 1.451 1.526 -0.075 0.008 N 34 1 N3 A C 4 ? ? C4 A C 4 ? ? 1.276 1.335 -0.059 0.007 N 35 1 C5 A C 4 ? ? C6 A C 4 ? ? 1.392 1.339 0.053 0.008 N 36 1 "O3'" A C 4 ? ? P A G 5 ? ? 1.524 1.607 -0.083 0.012 Y 37 1 P A G 5 ? ? "O5'" A G 5 ? ? 1.468 1.593 -0.125 0.010 N 38 1 C6 A G 5 ? ? O6 A G 5 ? ? 1.154 1.237 -0.083 0.009 N 39 1 P A G 6 ? ? "O5'" A G 6 ? ? 1.528 1.593 -0.065 0.010 N 40 1 "C4'" A G 6 ? ? "C3'" A G 6 ? ? 1.422 1.521 -0.099 0.010 N 41 1 N1 A G 6 ? ? C2 A G 6 ? ? 1.317 1.373 -0.056 0.008 N 42 1 N3 A G 6 ? ? C4 A G 6 ? ? 1.399 1.350 0.049 0.007 N 43 1 N7 A G 6 ? ? C8 A G 6 ? ? 1.358 1.305 0.053 0.006 N 44 1 "O3'" A G 6 ? ? P A C 7 ? ? 1.492 1.607 -0.115 0.012 Y 45 1 C2 A C 7 ? ? N3 A C 7 ? ? 1.403 1.353 0.050 0.008 N 46 1 C5 A C 7 ? ? C6 A C 7 ? ? 1.426 1.339 0.087 0.008 N 47 1 C5 A G 8 ? ? N7 A G 8 ? ? 1.348 1.388 -0.040 0.006 N 48 1 C6 A G 8 ? ? O6 A G 8 ? ? 1.182 1.237 -0.055 0.009 N 49 1 N1 A G 9 ? ? C2 A G 9 ? ? 1.310 1.373 -0.063 0.008 N 50 1 N7 A G 9 ? ? C8 A G 9 ? ? 1.341 1.305 0.036 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 S C 1 ? ? P S C 1 ? ? OP2 S C 1 ? ? 105.56 119.60 -14.04 1.50 N 2 1 "O4'" S C 1 ? ? "C1'" S C 1 ? ? N1 S C 1 ? ? 113.67 108.50 5.17 0.70 N 3 1 N1 S C 1 ? ? C2 S C 1 ? ? N3 S C 1 ? ? 114.29 119.20 -4.91 0.70 N 4 1 C2 S C 1 ? ? N3 S C 1 ? ? C4 S C 1 ? ? 125.84 119.90 5.94 0.50 N 5 1 N3 S C 1 ? ? C4 S C 1 ? ? C5 S C 1 ? ? 118.46 121.90 -3.44 0.40 N 6 1 C4 S C 1 ? ? C5 S C 1 ? ? C6 S C 1 ? ? 120.78 117.40 3.38 0.50 N 7 1 N1 S C 1 ? ? C2 S C 1 ? ? O2 S C 1 ? ? 123.10 118.90 4.20 0.60 N 8 1 N1 S C 2 ? ? C2 S C 2 ? ? N3 S C 2 ? ? 114.84 119.20 -4.36 0.70 N 9 1 C2 S C 2 ? ? N3 S C 2 ? ? C4 S C 2 ? ? 124.18 119.90 4.28 0.50 N 10 1 N3 S C 2 ? ? C2 S C 2 ? ? O2 S C 2 ? ? 126.48 121.90 4.58 0.70 N 11 1 OP1 S G 3 ? ? P S G 3 ? ? OP2 S G 3 ? ? 110.38 119.60 -9.22 1.50 N 12 1 C2 S G 3 ? ? N3 S G 3 ? ? C4 S G 3 ? ? 115.51 111.90 3.61 0.50 N 13 1 N3 S G 3 ? ? C4 S G 3 ? ? C5 S G 3 ? ? 123.32 128.60 -5.28 0.50 N 14 1 N9 S G 3 ? ? C4 S G 3 ? ? C5 S G 3 ? ? 108.22 105.40 2.82 0.40 N 15 1 "C3'" S G 3 ? ? "O3'" S G 3 ? ? P S C 4 ? ? 130.64 119.70 10.94 1.20 Y 16 1 "O3'" S G 3 ? ? P S C 4 ? ? OP2 S C 4 ? ? 119.44 110.50 8.94 1.10 Y 17 1 OP1 S C 4 ? ? P S C 4 ? ? OP2 S C 4 ? ? 103.31 119.60 -16.29 1.50 N 18 1 "O5'" S C 4 ? ? P S C 4 ? ? OP1 S C 4 ? ? 96.43 105.70 -9.27 0.90 N 19 1 C6 S C 4 ? ? N1 S C 4 ? ? C2 S C 4 ? ? 123.87 120.30 3.57 0.40 N 20 1 N3 S C 4 ? ? C4 S C 4 ? ? C5 S C 4 ? ? 119.00 121.90 -2.90 0.40 N 21 1 N1 S C 4 ? ? C2 S C 4 ? ? O2 S C 4 ? ? 123.30 118.90 4.40 0.60 N 22 1 N3 S C 4 ? ? C4 S C 4 ? ? N4 S C 4 ? ? 126.03 118.00 8.03 0.70 N 23 1 C5 S C 4 ? ? C4 S C 4 ? ? N4 S C 4 ? ? 114.97 120.20 -5.23 0.70 N 24 1 OP1 S G 5 ? ? P S G 5 ? ? OP2 S G 5 ? ? 107.27 119.60 -12.33 1.50 N 25 1 "C1'" S G 5 ? ? "O4'" S G 5 ? ? "C4'" S G 5 ? ? 104.21 109.70 -5.49 0.70 N 26 1 "C3'" S G 5 ? ? "C2'" S G 5 ? ? "C1'" S G 5 ? ? 96.44 101.30 -4.86 0.70 N 27 1 "O4'" S G 5 ? ? "C1'" S G 5 ? ? "C2'" S G 5 ? ? 113.08 107.60 5.48 0.90 N 28 1 C2 S G 5 ? ? N3 S G 5 ? ? C4 S G 5 ? ? 114.93 111.90 3.03 0.50 N 29 1 C4 S G 5 ? ? C5 S G 5 ? ? C6 S G 5 ? ? 115.03 118.80 -3.77 0.60 N 30 1 C5 S G 5 ? ? C6 S G 5 ? ? N1 S G 5 ? ? 115.00 111.50 3.50 0.50 N 31 1 C8 S G 5 ? ? N9 S G 5 ? ? C4 S G 5 ? ? 103.19 106.40 -3.21 0.40 N 32 1 C5 S G 5 ? ? C6 S G 5 ? ? O6 S G 5 ? ? 123.04 128.60 -5.56 0.60 N 33 1 OP1 S G 6 ? ? P S G 6 ? ? OP2 S G 6 ? ? 107.57 119.60 -12.03 1.50 N 34 1 C2 S G 6 ? ? N3 S G 6 ? ? C4 S G 6 ? ? 116.97 111.90 5.07 0.50 N 35 1 N3 S G 6 ? ? C4 S G 6 ? ? C5 S G 6 ? ? 122.07 128.60 -6.53 0.50 N 36 1 C4 S G 6 ? ? C5 S G 6 ? ? N7 S G 6 ? ? 106.15 110.80 -4.65 0.40 N 37 1 N7 S G 6 ? ? C8 S G 6 ? ? N9 S G 6 ? ? 116.65 113.10 3.55 0.50 N 38 1 C8 S G 6 ? ? N9 S G 6 ? ? C4 S G 6 ? ? 103.65 106.40 -2.75 0.40 N 39 1 N9 S G 6 ? ? C4 S G 6 ? ? C5 S G 6 ? ? 108.76 105.40 3.36 0.40 N 40 1 OP1 S C 7 ? ? P S C 7 ? ? OP2 S C 7 ? ? 109.63 119.60 -9.97 1.50 N 41 1 N1 S C 7 ? ? C2 S C 7 ? ? N3 S C 7 ? ? 114.33 119.20 -4.87 0.70 N 42 1 C2 S C 7 ? ? N3 S C 7 ? ? C4 S C 7 ? ? 128.76 119.90 8.86 0.50 N 43 1 N3 S C 7 ? ? C4 S C 7 ? ? C5 S C 7 ? ? 114.38 121.90 -7.52 0.40 N 44 1 C4 S C 7 ? ? C5 S C 7 ? ? C6 S C 7 ? ? 120.72 117.40 3.32 0.50 N 45 1 N3 S C 7 ? ? C2 S C 7 ? ? O2 S C 7 ? ? 127.48 121.90 5.58 0.70 N 46 1 N3 S C 7 ? ? C4 S C 7 ? ? N4 S C 7 ? ? 127.74 118.00 9.74 0.70 N 47 1 N1 S G 8 ? ? C2 S G 8 ? ? N3 S G 8 ? ? 120.06 123.90 -3.84 0.60 N 48 1 C2 S G 8 ? ? N3 S G 8 ? ? C4 S G 8 ? ? 120.45 111.90 8.55 0.50 N 49 1 N3 S G 8 ? ? C4 S G 8 ? ? C5 S G 8 ? ? 122.82 128.60 -5.78 0.50 N 50 1 N3 S G 8 ? ? C4 S G 8 ? ? N9 S G 8 ? ? 129.86 126.00 3.86 0.60 N 51 1 N1 S G 8 ? ? C2 S G 8 ? ? N2 S G 8 ? ? 122.29 116.20 6.09 0.90 N 52 1 C2 S G 9 ? ? N3 S G 9 ? ? C4 S G 9 ? ? 115.28 111.90 3.38 0.50 N 53 1 C8 S G 9 ? ? N9 S G 9 ? ? C4 S G 9 ? ? 103.13 106.40 -3.27 0.40 N 54 1 OP1 A C 1 ? ? P A C 1 ? ? OP2 A C 1 ? ? 109.65 119.60 -9.95 1.50 N 55 1 "O5'" A C 1 ? ? P A C 1 ? ? OP1 A C 1 ? ? 99.78 105.70 -5.92 0.90 N 56 1 C6 A C 1 ? ? N1 A C 1 ? ? C2 A C 1 ? ? 123.15 120.30 2.85 0.40 N 57 1 C2 A C 1 ? ? N3 A C 1 ? ? C4 A C 1 ? ? 123.20 119.90 3.30 0.50 N 58 1 N3 A C 1 ? ? C4 A C 1 ? ? C5 A C 1 ? ? 118.47 121.90 -3.43 0.40 N 59 1 N1 A C 1 ? ? C2 A C 1 ? ? O2 A C 1 ? ? 122.60 118.90 3.70 0.60 N 60 1 "C5'" A C 2 ? ? "C4'" A C 2 ? ? "C3'" A C 2 ? ? 104.83 115.20 -10.37 1.40 N 61 1 C5 A C 2 ? ? C6 A C 2 ? ? N1 A C 2 ? ? 124.11 121.00 3.11 0.50 N 62 1 N1 A C 2 ? ? C2 A C 2 ? ? O2 A C 2 ? ? 122.51 118.90 3.61 0.60 N 63 1 "O4'" A G 3 ? ? "C4'" A G 3 ? ? "C3'" A G 3 ? ? 96.26 104.00 -7.74 1.00 N 64 1 "C5'" A G 3 ? ? "C4'" A G 3 ? ? "C3'" A G 3 ? ? 105.18 115.20 -10.02 1.40 N 65 1 "C5'" A G 3 ? ? "C4'" A G 3 ? ? "O4'" A G 3 ? ? 119.78 109.80 9.98 0.90 N 66 1 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 96.89 101.30 -4.41 0.70 N 67 1 C2 A G 3 ? ? N3 A G 3 ? ? C4 A G 3 ? ? 118.84 111.90 6.94 0.50 N 68 1 N3 A G 3 ? ? C4 A G 3 ? ? C5 A G 3 ? ? 122.98 128.60 -5.62 0.50 N 69 1 N3 A G 3 ? ? C4 A G 3 ? ? N9 A G 3 ? ? 130.58 126.00 4.58 0.60 N 70 1 "C3'" A G 3 ? ? "O3'" A G 3 ? ? P A C 4 ? ? 111.58 119.70 -8.12 1.20 Y 71 1 "C5'" A C 4 ? ? "C4'" A C 4 ? ? "C3'" A C 4 ? ? 106.77 115.20 -8.43 1.40 N 72 1 "C5'" A C 4 ? ? "C4'" A C 4 ? ? "O4'" A C 4 ? ? 127.05 109.80 17.25 0.90 N 73 1 "C1'" A C 4 ? ? "O4'" A C 4 ? ? "C4'" A C 4 ? ? 114.72 109.90 4.82 0.80 N 74 1 "O4'" A C 4 ? ? "C1'" A C 4 ? ? "C2'" A C 4 ? ? 99.37 105.80 -6.43 1.00 N 75 1 "O4'" A C 4 ? ? "C1'" A C 4 ? ? N1 A C 4 ? ? 118.74 108.50 10.24 0.70 N 76 1 N3 A C 4 ? ? C4 A C 4 ? ? C5 A C 4 ? ? 124.73 121.90 2.83 0.40 N 77 1 C4 A C 4 ? ? C5 A C 4 ? ? C6 A C 4 ? ? 112.23 117.40 -5.17 0.50 N 78 1 "C5'" A G 5 ? ? "C4'" A G 5 ? ? "O4'" A G 5 ? ? 117.12 109.80 7.32 0.90 N 79 1 "C3'" A G 5 ? ? "C2'" A G 5 ? ? "C1'" A G 5 ? ? 94.61 101.30 -6.69 0.70 N 80 1 C2 A G 5 ? ? N3 A G 5 ? ? C4 A G 5 ? ? 118.09 111.90 6.19 0.50 N 81 1 N3 A G 5 ? ? C4 A G 5 ? ? C5 A G 5 ? ? 123.42 128.60 -5.18 0.50 N 82 1 C5 A G 5 ? ? C6 A G 5 ? ? N1 A G 5 ? ? 115.61 111.50 4.11 0.50 N 83 1 N9 A G 5 ? ? C4 A G 5 ? ? C5 A G 5 ? ? 102.54 105.40 -2.86 0.40 N 84 1 N3 A G 5 ? ? C4 A G 5 ? ? N9 A G 5 ? ? 134.04 126.00 8.04 0.60 N 85 1 C5 A G 5 ? ? C6 A G 5 ? ? O6 A G 5 ? ? 124.95 128.60 -3.65 0.60 N 86 1 OP1 A G 6 ? ? P A G 6 ? ? OP2 A G 6 ? ? 109.73 119.60 -9.87 1.50 N 87 1 "C5'" A G 6 ? ? "C4'" A G 6 ? ? "O4'" A G 6 ? ? 125.38 109.80 15.58 0.90 N 88 1 N9 A G 6 ? ? "C1'" A G 6 ? ? "C2'" A G 6 ? ? 104.17 112.00 -7.83 1.10 N 89 1 N3 A G 6 ? ? C4 A G 6 ? ? C5 A G 6 ? ? 123.99 128.60 -4.61 0.50 N 90 1 C8 A G 6 ? ? N9 A G 6 ? ? C4 A G 6 ? ? 103.62 106.40 -2.78 0.40 N 91 1 N9 A G 6 ? ? C4 A G 6 ? ? C5 A G 6 ? ? 109.06 105.40 3.66 0.40 N 92 1 N1 A G 6 ? ? C2 A G 6 ? ? N2 A G 6 ? ? 121.75 116.20 5.55 0.90 N 93 1 "C5'" A C 7 ? ? "C4'" A C 7 ? ? "O4'" A C 7 ? ? 125.24 109.80 15.44 0.90 N 94 1 "C1'" A C 7 ? ? "O4'" A C 7 ? ? "C4'" A C 7 ? ? 115.02 109.90 5.12 0.80 N 95 1 N3 A C 7 ? ? C4 A C 7 ? ? N4 A C 7 ? ? 122.51 118.00 4.51 0.70 N 96 1 C5 A C 7 ? ? C4 A C 7 ? ? N4 A C 7 ? ? 114.60 120.20 -5.60 0.70 N 97 1 OP1 A G 8 ? ? P A G 8 ? ? OP2 A G 8 ? ? 108.92 119.60 -10.68 1.50 N 98 1 C2 A G 8 ? ? N3 A G 8 ? ? C4 A G 8 ? ? 115.98 111.90 4.08 0.50 N 99 1 N3 A G 8 ? ? C4 A G 8 ? ? C5 A G 8 ? ? 124.89 128.60 -3.71 0.50 N 100 1 C8 A G 8 ? ? N9 A G 8 ? ? C4 A G 8 ? ? 103.89 106.40 -2.51 0.40 N 101 1 N1 A G 8 ? ? C6 A G 8 ? ? O6 A G 8 ? ? 123.99 119.90 4.09 0.60 N 102 1 N3 A G 9 ? ? C4 A G 9 ? ? C5 A G 9 ? ? 125.11 128.60 -3.49 0.50 N 103 1 C5 A G 9 ? ? C6 A G 9 ? ? N1 A G 9 ? ? 114.56 111.50 3.06 0.50 N 104 1 N3 A G 9 ? ? C2 A G 9 ? ? N2 A G 9 ? ? 113.24 119.90 -6.66 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G S 5 ? ? 0.063 'SIDE CHAIN' 2 1 G A 3 ? ? 0.073 'SIDE CHAIN' 3 1 G A 5 ? ? 0.072 'SIDE CHAIN' 4 1 G A 6 ? ? 0.076 'SIDE CHAIN' 5 1 C A 7 ? ? 0.070 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2NCQ 'double helix' 2NCQ 'a-form double helix' 2NCQ 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 B G 9 1_555 0.197 -0.112 -0.220 -3.394 4.128 -0.224 1 S_C1:G9_A S 1 ? A 9 ? 19 1 1 A C 2 1_555 B G 8 1_555 0.161 -0.097 -0.179 1.100 0.123 -1.505 2 S_C2:G8_A S 2 ? A 8 ? 19 1 1 A G 3 1_555 B C 7 1_555 -0.184 -0.276 -0.603 -4.812 -4.071 -1.291 3 S_G3:C7_A S 3 ? A 7 ? 19 1 1 A C 4 1_555 B G 6 1_555 0.101 -0.075 -0.024 0.627 -5.858 -0.797 4 S_C4:G6_A S 4 ? A 6 ? 19 1 1 A G 5 1_555 B G 5 1_555 -0.661 -3.985 -0.892 16.701 8.342 91.191 5 S_G5:G5_A S 5 ? A 5 ? 6 3 1 A G 6 1_555 B C 4 1_555 -0.061 -0.028 -0.130 -7.858 -10.779 0.044 6 S_G6:C4_A S 6 ? A 4 ? 19 1 1 A C 7 1_555 B G 3 1_555 0.192 -0.140 -0.120 -0.729 -3.578 -1.807 7 S_C7:G3_A S 7 ? A 3 ? 19 1 1 A G 8 1_555 B C 2 1_555 -0.193 -0.142 -0.519 -2.934 -1.932 -0.054 8 S_G8:C2_A S 8 ? A 2 ? 19 1 1 A G 9 1_555 B C 1 1_555 -0.241 -0.126 -0.361 -0.235 -0.340 -1.729 9 S_G9:C1_A S 9 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 B G 9 1_555 A C 2 1_555 B G 8 1_555 0.008 -1.460 3.159 0.885 11.824 30.873 -4.349 0.120 2.449 21.253 -1.591 33.020 1 SS_C1C2:G8G9_AA S 1 ? A 9 ? S 2 ? A 8 ? 1 A C 2 1_555 B G 8 1_555 A G 3 1_555 B C 7 1_555 -0.184 -1.291 3.467 3.874 12.955 29.770 -4.503 0.987 2.647 23.735 -7.098 32.634 2 SS_C2G3:C7G8_AA S 2 ? A 8 ? S 3 ? A 7 ? 1 A G 3 1_555 B C 7 1_555 A C 4 1_555 B G 6 1_555 -0.162 -1.233 3.138 -0.498 4.166 29.426 -3.221 0.217 2.942 8.149 0.975 29.717 3 SS_G3C4:G6C7_AA S 3 ? A 7 ? S 4 ? A 6 ? 1 A C 4 1_555 B G 6 1_555 A G 5 1_555 B G 5 1_555 0.898 -3.508 -0.243 -174.540 28.043 46.475 -1.667 0.093 -1.422 14.176 88.233 177.040 4 SS_C4G5:G5G6_AA S 4 ? A 6 ? S 5 ? A 5 ? 1 A G 5 1_555 B G 5 1_555 A G 6 1_555 B C 4 1_555 0.599 -4.173 -1.923 126.848 -103.833 145.487 -2.224 -0.465 -0.925 -52.143 -63.700 175.246 5 SS_G5G6:C4G5_AA S 5 ? A 5 ? S 6 ? A 4 ? 1 A G 6 1_555 B C 4 1_555 A C 7 1_555 B G 3 1_555 -0.855 -1.437 2.714 0.803 4.184 27.812 -3.736 1.909 2.451 8.640 -1.659 28.130 6 SS_G6C7:G3C4_AA S 6 ? A 4 ? S 7 ? A 3 ? 1 A C 7 1_555 B G 3 1_555 A G 8 1_555 B C 2 1_555 0.027 -1.374 3.313 3.590 10.167 28.906 -4.462 0.611 2.672 19.530 -6.897 30.812 7 SS_C7G8:C2G3_AA S 7 ? A 3 ? S 8 ? A 2 ? 1 A G 8 1_555 B C 2 1_555 A G 9 1_555 B C 1 1_555 -0.057 -1.285 3.234 -1.739 10.926 30.771 -4.039 -0.178 2.635 19.805 3.152 32.654 8 SS_G8G9:C1C2_AA S 8 ? A 2 ? S 9 ? A 1 ? #