data_2NLL # _entry.id 2NLL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2NLL pdb_00002nll 10.2210/pdb2nll/pdb RCSB PDR021 ? ? WWPDB D_1000178405 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-03-12 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_conn_type 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.conn_type_id' 4 4 'Structure model' '_struct_conn.id' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 4 'Structure model' '_struct_conn_type.id' 22 4 'Structure model' '_struct_ref_seq_dif.details' 23 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2NLL _pdbx_database_status.recvd_initial_deposition_date 1996-11-20 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rastinejad, F.' 1 'Perlmann, T.' 2 'Evans, R.M.' 3 'Sigler, P.B.' 4 # _citation.id primary _citation.title 'Structural determinants of nuclear receptor assembly on DNA direct repeats.' _citation.journal_abbrev Nature _citation.journal_volume 375 _citation.page_first 203 _citation.page_last 211 _citation.year 1995 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7746322 _citation.pdbx_database_id_DOI 10.1038/375203a0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rastinejad, F.' 1 ? primary 'Perlmann, T.' 2 ? primary 'Evans, R.M.' 3 ? primary 'Sigler, P.B.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*AP*GP*GP*TP*CP*AP*TP*TP*(5IU)P*CP*AP*GP*GP*TP*CP*AP*G)-3') ; 5643.460 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*GP*AP*AP*AP*TP*GP*AP*CP*CP*T P*G)-3') ; 5500.580 1 ? ? ? ? 3 polymer man 'PROTEIN (RETINOIC ACID RECEPTOR)' 7749.072 1 ? ? ? ? 4 polymer man 'PROTEIN (THYROID HORMONE RECEPTOR)' 12203.241 1 ? ? ? ? 5 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 6 water nat water 18.015 236 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DA)(DG)(DG)(DT)(DC)(DA)(DT)(DT)(5IU)(DC)(DA)(DG)(DG)(DT)(DC)(DA)(DG)' CAGGTCATTUCAGGTCAG C ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DA)(DC)(DC)(DT)(DG)(DA)(DA)(DA)(DT)(DG)(DA)(DC)(DC)(DT)(DG)' CTGACCTGAAATGACCTG D ? 3 'polypeptide(L)' no no CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGM CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGM A ? 4 'polypeptide(L)' no no ;DELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS KRLAKRKLIEENREKRRREELEK ; ;DELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS KRLAKRKLIEENREKRRREELEK ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'ZINC ION' ZN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DC n 1 7 DA n 1 8 DT n 1 9 DT n 1 10 5IU n 1 11 DC n 1 12 DA n 1 13 DG n 1 14 DG n 1 15 DT n 1 16 DC n 1 17 DA n 1 18 DG n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DA n 2 10 DA n 2 11 DA n 2 12 DT n 2 13 DG n 2 14 DA n 2 15 DC n 2 16 DC n 2 17 DT n 2 18 DG n 3 1 CYS n 3 2 ALA n 3 3 ILE n 3 4 CYS n 3 5 GLY n 3 6 ASP n 3 7 ARG n 3 8 SER n 3 9 SER n 3 10 GLY n 3 11 LYS n 3 12 HIS n 3 13 TYR n 3 14 GLY n 3 15 VAL n 3 16 TYR n 3 17 SER n 3 18 CYS n 3 19 GLU n 3 20 GLY n 3 21 CYS n 3 22 LYS n 3 23 GLY n 3 24 PHE n 3 25 PHE n 3 26 LYS n 3 27 ARG n 3 28 THR n 3 29 VAL n 3 30 ARG n 3 31 LYS n 3 32 ASP n 3 33 LEU n 3 34 THR n 3 35 TYR n 3 36 THR n 3 37 CYS n 3 38 ARG n 3 39 ASP n 3 40 ASN n 3 41 LYS n 3 42 ASP n 3 43 CYS n 3 44 LEU n 3 45 ILE n 3 46 ASP n 3 47 LYS n 3 48 ARG n 3 49 GLN n 3 50 ARG n 3 51 ASN n 3 52 ARG n 3 53 CYS n 3 54 GLN n 3 55 TYR n 3 56 CYS n 3 57 ARG n 3 58 TYR n 3 59 GLN n 3 60 LYS n 3 61 CYS n 3 62 LEU n 3 63 ALA n 3 64 MET n 3 65 GLY n 3 66 MET n 4 1 ASP n 4 2 GLU n 4 3 LEU n 4 4 CYS n 4 5 VAL n 4 6 VAL n 4 7 CYS n 4 8 GLY n 4 9 ASP n 4 10 LYS n 4 11 ALA n 4 12 THR n 4 13 GLY n 4 14 TYR n 4 15 HIS n 4 16 TYR n 4 17 ARG n 4 18 CYS n 4 19 ILE n 4 20 THR n 4 21 CYS n 4 22 GLU n 4 23 GLY n 4 24 CYS n 4 25 LYS n 4 26 GLY n 4 27 PHE n 4 28 PHE n 4 29 ARG n 4 30 ARG n 4 31 THR n 4 32 ILE n 4 33 GLN n 4 34 LYS n 4 35 ASN n 4 36 LEU n 4 37 HIS n 4 38 PRO n 4 39 SER n 4 40 TYR n 4 41 SER n 4 42 CYS n 4 43 LYS n 4 44 TYR n 4 45 GLU n 4 46 GLY n 4 47 LYS n 4 48 CYS n 4 49 VAL n 4 50 ILE n 4 51 ASP n 4 52 LYS n 4 53 VAL n 4 54 THR n 4 55 ARG n 4 56 ASN n 4 57 GLN n 4 58 CYS n 4 59 GLN n 4 60 GLU n 4 61 CYS n 4 62 ARG n 4 63 PHE n 4 64 LYS n 4 65 LYS n 4 66 CYS n 4 67 ILE n 4 68 TYR n 4 69 VAL n 4 70 GLY n 4 71 MET n 4 72 ALA n 4 73 THR n 4 74 ASP n 4 75 LEU n 4 76 VAL n 4 77 LEU n 4 78 ASP n 4 79 ASP n 4 80 SER n 4 81 LYS n 4 82 ARG n 4 83 LEU n 4 84 ALA n 4 85 LYS n 4 86 ARG n 4 87 LYS n 4 88 LEU n 4 89 ILE n 4 90 GLU n 4 91 GLU n 4 92 ASN n 4 93 ARG n 4 94 GLU n 4 95 LYS n 4 96 ARG n 4 97 ARG n 4 98 ARG n 4 99 GLU n 4 100 GLU n 4 101 LEU n 4 102 GLU n 4 103 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 3 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5IU 'DNA linking' n "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 I N2 O8 P' 434.078 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 502 502 DC C C . n A 1 2 DA 2 503 503 DA A C . n A 1 3 DG 3 504 504 DG G C . n A 1 4 DG 4 505 505 DG G C . n A 1 5 DT 5 506 506 DT T C . n A 1 6 DC 6 507 507 DC C C . n A 1 7 DA 7 508 508 DA A C . n A 1 8 DT 8 509 509 DT T C . n A 1 9 DT 9 510 510 DT T C . n A 1 10 5IU 10 511 511 5IU +U C . n A 1 11 DC 11 512 512 DC C C . n A 1 12 DA 12 513 513 DA A C . n A 1 13 DG 13 514 514 DG G C . n A 1 14 DG 14 515 515 DG G C . n A 1 15 DT 15 516 516 DT T C . n A 1 16 DC 16 517 517 DC C C . n A 1 17 DA 17 518 518 DA A C . n A 1 18 DG 18 519 519 DG G C . n B 2 1 DC 1 521 521 DC C D . n B 2 2 DT 2 522 522 DT T D . n B 2 3 DG 3 523 523 DG G D . n B 2 4 DA 4 524 524 DA A D . n B 2 5 DC 5 525 525 DC C D . n B 2 6 DC 6 526 526 DC C D . n B 2 7 DT 7 527 527 DT T D . n B 2 8 DG 8 528 528 DG G D . n B 2 9 DA 9 529 529 DA A D . n B 2 10 DA 10 530 530 DA A D . n B 2 11 DA 11 531 531 DA A D . n B 2 12 DT 12 532 532 DT T D . n B 2 13 DG 13 533 533 DG G D . n B 2 14 DA 14 534 534 DA A D . n B 2 15 DC 15 535 535 DC C D . n B 2 16 DC 16 536 536 DC C D . n B 2 17 DT 17 537 537 DT T D . n B 2 18 DG 18 538 538 DG G D . n C 3 1 CYS 1 135 135 CYS CYS A . n C 3 2 ALA 2 136 136 ALA ALA A . n C 3 3 ILE 3 137 137 ILE ILE A . n C 3 4 CYS 4 138 138 CYS CYS A . n C 3 5 GLY 5 139 139 GLY GLY A . n C 3 6 ASP 6 140 140 ASP ASP A . n C 3 7 ARG 7 141 141 ARG ARG A . n C 3 8 SER 8 142 142 SER SER A . n C 3 9 SER 9 143 143 SER SER A . n C 3 10 GLY 10 144 144 GLY GLY A . n C 3 11 LYS 11 145 145 LYS LYS A . n C 3 12 HIS 12 146 146 HIS HIS A . n C 3 13 TYR 13 147 147 TYR TYR A . n C 3 14 GLY 14 148 148 GLY GLY A . n C 3 15 VAL 15 149 149 VAL VAL A . n C 3 16 TYR 16 150 150 TYR TYR A . n C 3 17 SER 17 151 151 SER SER A . n C 3 18 CYS 18 152 152 CYS CYS A . n C 3 19 GLU 19 153 153 GLU GLU A . n C 3 20 GLY 20 154 154 GLY GLY A . n C 3 21 CYS 21 155 155 CYS CYS A . n C 3 22 LYS 22 156 156 LYS LYS A . n C 3 23 GLY 23 157 157 GLY GLY A . n C 3 24 PHE 24 158 158 PHE PHE A . n C 3 25 PHE 25 159 159 PHE PHE A . n C 3 26 LYS 26 160 160 LYS LYS A . n C 3 27 ARG 27 161 161 ARG ARG A . n C 3 28 THR 28 162 162 THR THR A . n C 3 29 VAL 29 163 163 VAL VAL A . n C 3 30 ARG 30 164 164 ARG ARG A . n C 3 31 LYS 31 165 165 LYS LYS A . n C 3 32 ASP 32 166 166 ASP ASP A . n C 3 33 LEU 33 167 167 LEU LEU A . n C 3 34 THR 34 168 168 THR THR A . n C 3 35 TYR 35 169 169 TYR TYR A . n C 3 36 THR 36 170 170 THR THR A . n C 3 37 CYS 37 171 171 CYS CYS A . n C 3 38 ARG 38 172 172 ARG ARG A . n C 3 39 ASP 39 173 173 ASP ASP A . n C 3 40 ASN 40 174 174 ASN ASN A . n C 3 41 LYS 41 175 175 LYS LYS A . n C 3 42 ASP 42 176 176 ASP ASP A . n C 3 43 CYS 43 177 177 CYS CYS A . n C 3 44 LEU 44 178 178 LEU LEU A . n C 3 45 ILE 45 179 179 ILE ILE A . n C 3 46 ASP 46 180 180 ASP ASP A . n C 3 47 LYS 47 181 181 LYS LYS A . n C 3 48 ARG 48 182 182 ARG ARG A . n C 3 49 GLN 49 183 183 GLN GLN A . n C 3 50 ARG 50 184 184 ARG ARG A . n C 3 51 ASN 51 185 185 ASN ASN A . n C 3 52 ARG 52 186 186 ARG ARG A . n C 3 53 CYS 53 187 187 CYS CYS A . n C 3 54 GLN 54 188 188 GLN GLN A . n C 3 55 TYR 55 189 189 TYR TYR A . n C 3 56 CYS 56 190 190 CYS CYS A . n C 3 57 ARG 57 191 191 ARG ARG A . n C 3 58 TYR 58 192 192 TYR TYR A . n C 3 59 GLN 59 193 193 GLN GLN A . n C 3 60 LYS 60 194 194 LYS LYS A . n C 3 61 CYS 61 195 195 CYS CYS A . n C 3 62 LEU 62 196 196 LEU LEU A . n C 3 63 ALA 63 197 197 ALA ALA A . n C 3 64 MET 64 198 198 MET MET A . n C 3 65 GLY 65 199 199 GLY GLY A . n C 3 66 MET 66 200 200 MET MET A . n D 4 1 ASP 1 300 300 ASP ASP B . n D 4 2 GLU 2 301 301 GLU GLU B . n D 4 3 LEU 3 302 302 LEU LEU B . n D 4 4 CYS 4 303 303 CYS CYS B . n D 4 5 VAL 5 304 304 VAL VAL B . n D 4 6 VAL 6 305 305 VAL VAL B . n D 4 7 CYS 7 306 306 CYS CYS B . n D 4 8 GLY 8 307 307 GLY GLY B . n D 4 9 ASP 9 308 308 ASP ASP B . n D 4 10 LYS 10 309 309 LYS LYS B . n D 4 11 ALA 11 310 310 ALA ALA B . n D 4 12 THR 12 311 311 THR THR B . n D 4 13 GLY 13 312 312 GLY GLY B . n D 4 14 TYR 14 313 313 TYR TYR B . n D 4 15 HIS 15 314 314 HIS HIS B . n D 4 16 TYR 16 315 315 TYR TYR B . n D 4 17 ARG 17 316 316 ARG ARG B . n D 4 18 CYS 18 317 317 CYS CYS B . n D 4 19 ILE 19 318 318 ILE ILE B . n D 4 20 THR 20 319 319 THR THR B . n D 4 21 CYS 21 320 320 CYS CYS B . n D 4 22 GLU 22 321 321 GLU GLU B . n D 4 23 GLY 23 322 322 GLY GLY B . n D 4 24 CYS 24 323 323 CYS CYS B . n D 4 25 LYS 25 324 324 LYS LYS B . n D 4 26 GLY 26 325 325 GLY GLY B . n D 4 27 PHE 27 326 326 PHE PHE B . n D 4 28 PHE 28 327 327 PHE PHE B . n D 4 29 ARG 29 328 328 ARG ARG B . n D 4 30 ARG 30 329 329 ARG ARG B . n D 4 31 THR 31 330 330 THR THR B . n D 4 32 ILE 32 331 331 ILE ILE B . n D 4 33 GLN 33 332 332 GLN GLN B . n D 4 34 LYS 34 333 333 LYS LYS B . n D 4 35 ASN 35 334 334 ASN ASN B . n D 4 36 LEU 36 335 335 LEU LEU B . n D 4 37 HIS 37 336 336 HIS HIS B . n D 4 38 PRO 38 337 337 PRO PRO B . n D 4 39 SER 39 338 338 SER SER B . n D 4 40 TYR 40 339 339 TYR TYR B . n D 4 41 SER 41 340 340 SER SER B . n D 4 42 CYS 42 341 341 CYS CYS B . n D 4 43 LYS 43 342 342 LYS LYS B . n D 4 44 TYR 44 343 343 TYR TYR B . n D 4 45 GLU 45 344 344 GLU GLU B . n D 4 46 GLY 46 345 345 GLY GLY B . n D 4 47 LYS 47 346 346 LYS LYS B . n D 4 48 CYS 48 347 347 CYS CYS B . n D 4 49 VAL 49 348 348 VAL VAL B . n D 4 50 ILE 50 349 349 ILE ILE B . n D 4 51 ASP 51 350 350 ASP ASP B . n D 4 52 LYS 52 351 351 LYS LYS B . n D 4 53 VAL 53 352 352 VAL VAL B . n D 4 54 THR 54 353 353 THR THR B . n D 4 55 ARG 55 354 354 ARG ARG B . n D 4 56 ASN 56 355 355 ASN ASN B . n D 4 57 GLN 57 356 356 GLN GLN B . n D 4 58 CYS 58 357 357 CYS CYS B . n D 4 59 GLN 59 358 358 GLN GLN B . n D 4 60 GLU 60 359 359 GLU GLU B . n D 4 61 CYS 61 360 360 CYS CYS B . n D 4 62 ARG 62 361 361 ARG ARG B . n D 4 63 PHE 63 362 362 PHE PHE B . n D 4 64 LYS 64 363 363 LYS LYS B . n D 4 65 LYS 65 364 364 LYS LYS B . n D 4 66 CYS 66 365 365 CYS CYS B . n D 4 67 ILE 67 366 366 ILE ILE B . n D 4 68 TYR 68 367 367 TYR TYR B . n D 4 69 VAL 69 368 368 VAL VAL B . n D 4 70 GLY 70 369 369 GLY GLY B . n D 4 71 MET 71 370 370 MET MET B . n D 4 72 ALA 72 371 371 ALA ALA B . n D 4 73 THR 73 372 372 THR THR B . n D 4 74 ASP 74 373 373 ASP ASP B . n D 4 75 LEU 75 374 374 LEU LEU B . n D 4 76 VAL 76 375 375 VAL VAL B . n D 4 77 LEU 77 376 376 LEU LEU B . n D 4 78 ASP 78 377 377 ASP ASP B . n D 4 79 ASP 79 378 378 ASP ASP B . n D 4 80 SER 80 379 379 SER SER B . n D 4 81 LYS 81 380 380 LYS LYS B . n D 4 82 ARG 82 381 381 ARG ARG B . n D 4 83 LEU 83 382 382 LEU LEU B . n D 4 84 ALA 84 383 383 ALA ALA B . n D 4 85 LYS 85 384 384 LYS LYS B . n D 4 86 ARG 86 385 385 ARG ARG B . n D 4 87 LYS 87 386 386 LYS LYS B . n D 4 88 LEU 88 387 387 LEU LEU B . n D 4 89 ILE 89 388 388 ILE ILE B . n D 4 90 GLU 90 389 389 GLU GLU B . n D 4 91 GLU 91 390 390 GLU GLU B . n D 4 92 ASN 92 391 391 ASN ASN B . n D 4 93 ARG 93 392 392 ARG ARG B . n D 4 94 GLU 94 393 393 GLU GLU B . n D 4 95 LYS 95 394 394 LYS LYS B . n D 4 96 ARG 96 395 395 ARG ARG B . n D 4 97 ARG 97 396 396 ARG ARG B . n D 4 98 ARG 98 397 397 ARG ARG B . n D 4 99 GLU 99 398 398 GLU GLU B . n D 4 100 GLU 100 399 399 GLU GLU B . n D 4 101 LEU 101 400 400 LEU LEU B . n D 4 102 GLU 102 401 401 GLU GLU B . n D 4 103 LYS 103 402 402 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN 1 250 250 ZN ZN A . F 5 ZN 1 251 251 ZN ZN A . G 5 ZN 1 450 450 ZN ZN B . H 5 ZN 1 451 451 ZN ZN B . I 6 HOH 1 602 602 HOH HOH C . I 6 HOH 2 603 603 HOH HOH C . I 6 HOH 3 604 604 HOH HOH C . I 6 HOH 4 605 605 HOH HOH C . I 6 HOH 5 609 609 HOH HOH C . I 6 HOH 6 611 611 HOH HOH C . I 6 HOH 7 612 612 HOH HOH C . I 6 HOH 8 614 614 HOH HOH C . I 6 HOH 9 616 616 HOH HOH C . I 6 HOH 10 617 617 HOH HOH C . I 6 HOH 11 618 618 HOH HOH C . I 6 HOH 12 621 621 HOH HOH C . I 6 HOH 13 625 625 HOH HOH C . I 6 HOH 14 628 628 HOH HOH C . I 6 HOH 15 629 629 HOH HOH C . I 6 HOH 16 631 631 HOH HOH C . I 6 HOH 17 632 632 HOH HOH C . I 6 HOH 18 633 633 HOH HOH C . I 6 HOH 19 634 634 HOH HOH C . I 6 HOH 20 635 635 HOH HOH C . I 6 HOH 21 637 637 HOH HOH C . I 6 HOH 22 638 638 HOH HOH C . I 6 HOH 23 664 664 HOH HOH C . I 6 HOH 24 692 692 HOH HOH C . I 6 HOH 25 699 699 HOH HOH C . I 6 HOH 26 705 705 HOH HOH C . I 6 HOH 27 707 707 HOH HOH C . I 6 HOH 28 708 708 HOH HOH C . I 6 HOH 29 712 712 HOH HOH C . I 6 HOH 30 723 723 HOH HOH C . I 6 HOH 31 728 728 HOH HOH C . I 6 HOH 32 735 735 HOH HOH C . I 6 HOH 33 736 736 HOH HOH C . I 6 HOH 34 739 739 HOH HOH C . I 6 HOH 35 747 747 HOH HOH C . I 6 HOH 36 751 751 HOH HOH C . I 6 HOH 37 752 752 HOH HOH C . I 6 HOH 38 754 754 HOH HOH C . I 6 HOH 39 759 759 HOH HOH C . I 6 HOH 40 771 771 HOH HOH C . I 6 HOH 41 777 777 HOH HOH C . I 6 HOH 42 779 779 HOH HOH C . I 6 HOH 43 782 782 HOH HOH C . I 6 HOH 44 797 797 HOH HOH C . I 6 HOH 45 798 798 HOH HOH C . I 6 HOH 46 799 799 HOH HOH C . I 6 HOH 47 810 810 HOH HOH C . I 6 HOH 48 811 811 HOH HOH C . I 6 HOH 49 816 816 HOH HOH C . I 6 HOH 50 817 817 HOH HOH C . I 6 HOH 51 818 818 HOH HOH C . I 6 HOH 52 823 823 HOH HOH C . I 6 HOH 53 829 829 HOH HOH C . I 6 HOH 54 830 830 HOH HOH C . I 6 HOH 55 834 834 HOH HOH C . I 6 HOH 56 836 836 HOH HOH C . I 6 HOH 57 839 839 HOH HOH C . I 6 HOH 58 842 842 HOH HOH C . J 6 HOH 1 606 606 HOH HOH D . J 6 HOH 2 608 608 HOH HOH D . J 6 HOH 3 613 613 HOH HOH D . J 6 HOH 4 615 615 HOH HOH D . J 6 HOH 5 620 620 HOH HOH D . J 6 HOH 6 622 622 HOH HOH D . J 6 HOH 7 623 623 HOH HOH D . J 6 HOH 8 626 626 HOH HOH D . J 6 HOH 9 650 650 HOH HOH D . J 6 HOH 10 672 672 HOH HOH D . J 6 HOH 11 673 673 HOH HOH D . J 6 HOH 12 674 674 HOH HOH D . J 6 HOH 13 677 677 HOH HOH D . J 6 HOH 14 678 678 HOH HOH D . J 6 HOH 15 683 683 HOH HOH D . J 6 HOH 16 689 689 HOH HOH D . J 6 HOH 17 690 690 HOH HOH D . J 6 HOH 18 737 737 HOH HOH D . J 6 HOH 19 741 741 HOH HOH D . J 6 HOH 20 745 745 HOH HOH D . J 6 HOH 21 748 748 HOH HOH D . J 6 HOH 22 749 749 HOH HOH D . J 6 HOH 23 750 750 HOH HOH D . J 6 HOH 24 753 753 HOH HOH D . J 6 HOH 25 755 755 HOH HOH D . J 6 HOH 26 757 757 HOH HOH D . J 6 HOH 27 770 770 HOH HOH D . J 6 HOH 28 776 776 HOH HOH D . J 6 HOH 29 780 780 HOH HOH D . J 6 HOH 30 801 801 HOH HOH D . J 6 HOH 31 802 802 HOH HOH D . J 6 HOH 32 803 803 HOH HOH D . J 6 HOH 33 813 813 HOH HOH D . J 6 HOH 34 814 814 HOH HOH D . J 6 HOH 35 815 815 HOH HOH D . J 6 HOH 36 822 822 HOH HOH D . J 6 HOH 37 826 826 HOH HOH D . J 6 HOH 38 827 827 HOH HOH D . J 6 HOH 39 828 828 HOH HOH D . J 6 HOH 40 832 832 HOH HOH D . J 6 HOH 41 833 833 HOH HOH D . J 6 HOH 42 835 835 HOH HOH D . J 6 HOH 43 841 841 HOH HOH D . K 6 HOH 1 624 624 HOH HOH A . K 6 HOH 2 636 636 HOH HOH A . K 6 HOH 3 639 639 HOH HOH A . K 6 HOH 4 661 661 HOH HOH A . K 6 HOH 5 711 711 HOH HOH A . K 6 HOH 6 713 713 HOH HOH A . K 6 HOH 7 714 714 HOH HOH A . K 6 HOH 8 715 715 HOH HOH A . K 6 HOH 9 717 717 HOH HOH A . K 6 HOH 10 718 718 HOH HOH A . K 6 HOH 11 719 719 HOH HOH A . K 6 HOH 12 720 720 HOH HOH A . K 6 HOH 13 721 721 HOH HOH A . K 6 HOH 14 722 722 HOH HOH A . K 6 HOH 15 724 724 HOH HOH A . K 6 HOH 16 725 725 HOH HOH A . K 6 HOH 17 726 726 HOH HOH A . K 6 HOH 18 727 727 HOH HOH A . K 6 HOH 19 729 729 HOH HOH A . K 6 HOH 20 730 730 HOH HOH A . K 6 HOH 21 731 731 HOH HOH A . K 6 HOH 22 732 732 HOH HOH A . K 6 HOH 23 733 733 HOH HOH A . K 6 HOH 24 738 738 HOH HOH A . K 6 HOH 25 740 740 HOH HOH A . K 6 HOH 26 742 742 HOH HOH A . K 6 HOH 27 743 743 HOH HOH A . K 6 HOH 28 744 744 HOH HOH A . K 6 HOH 29 746 746 HOH HOH A . K 6 HOH 30 756 756 HOH HOH A . K 6 HOH 31 760 760 HOH HOH A . K 6 HOH 32 761 761 HOH HOH A . K 6 HOH 33 762 762 HOH HOH A . K 6 HOH 34 763 763 HOH HOH A . K 6 HOH 35 764 764 HOH HOH A . K 6 HOH 36 765 765 HOH HOH A . K 6 HOH 37 766 766 HOH HOH A . K 6 HOH 38 767 767 HOH HOH A . K 6 HOH 39 769 769 HOH HOH A . K 6 HOH 40 785 785 HOH HOH A . K 6 HOH 41 786 786 HOH HOH A . K 6 HOH 42 787 787 HOH HOH A . K 6 HOH 43 788 788 HOH HOH A . K 6 HOH 44 789 789 HOH HOH A . K 6 HOH 45 790 790 HOH HOH A . K 6 HOH 46 791 791 HOH HOH A . K 6 HOH 47 792 792 HOH HOH A . K 6 HOH 48 793 793 HOH HOH A . K 6 HOH 49 794 794 HOH HOH A . K 6 HOH 50 837 837 HOH HOH A . K 6 HOH 51 838 838 HOH HOH A . K 6 HOH 52 840 840 HOH HOH A . L 6 HOH 1 601 601 HOH HOH B . L 6 HOH 2 607 607 HOH HOH B . L 6 HOH 3 610 610 HOH HOH B . L 6 HOH 4 619 619 HOH HOH B . L 6 HOH 5 627 627 HOH HOH B . L 6 HOH 6 640 640 HOH HOH B . L 6 HOH 7 641 641 HOH HOH B . L 6 HOH 8 642 642 HOH HOH B . L 6 HOH 9 643 643 HOH HOH B . L 6 HOH 10 644 644 HOH HOH B . L 6 HOH 11 645 645 HOH HOH B . L 6 HOH 12 646 646 HOH HOH B . L 6 HOH 13 647 647 HOH HOH B . L 6 HOH 14 648 648 HOH HOH B . L 6 HOH 15 649 649 HOH HOH B . L 6 HOH 16 651 651 HOH HOH B . L 6 HOH 17 652 652 HOH HOH B . L 6 HOH 18 653 653 HOH HOH B . L 6 HOH 19 654 654 HOH HOH B . L 6 HOH 20 655 655 HOH HOH B . L 6 HOH 21 656 656 HOH HOH B . L 6 HOH 22 657 657 HOH HOH B . L 6 HOH 23 658 658 HOH HOH B . L 6 HOH 24 659 659 HOH HOH B . L 6 HOH 25 660 660 HOH HOH B . L 6 HOH 26 662 662 HOH HOH B . L 6 HOH 27 663 663 HOH HOH B . L 6 HOH 28 665 665 HOH HOH B . L 6 HOH 29 666 666 HOH HOH B . L 6 HOH 30 667 667 HOH HOH B . L 6 HOH 31 668 668 HOH HOH B . L 6 HOH 32 669 669 HOH HOH B . L 6 HOH 33 671 671 HOH HOH B . L 6 HOH 34 675 675 HOH HOH B . L 6 HOH 35 676 676 HOH HOH B . L 6 HOH 36 679 679 HOH HOH B . L 6 HOH 37 681 681 HOH HOH B . L 6 HOH 38 682 682 HOH HOH B . L 6 HOH 39 684 684 HOH HOH B . L 6 HOH 40 685 685 HOH HOH B . L 6 HOH 41 686 686 HOH HOH B . L 6 HOH 42 687 687 HOH HOH B . L 6 HOH 43 688 688 HOH HOH B . L 6 HOH 44 691 691 HOH HOH B . L 6 HOH 45 693 693 HOH HOH B . L 6 HOH 46 694 694 HOH HOH B . L 6 HOH 47 695 695 HOH HOH B . L 6 HOH 48 696 696 HOH HOH B . L 6 HOH 49 697 697 HOH HOH B . L 6 HOH 50 698 698 HOH HOH B . L 6 HOH 51 700 700 HOH HOH B . L 6 HOH 52 701 701 HOH HOH B . L 6 HOH 53 702 702 HOH HOH B . L 6 HOH 54 703 703 HOH HOH B . L 6 HOH 55 704 704 HOH HOH B . L 6 HOH 56 706 706 HOH HOH B . L 6 HOH 57 716 716 HOH HOH B . L 6 HOH 58 758 758 HOH HOH B . L 6 HOH 59 768 768 HOH HOH B . L 6 HOH 60 772 772 HOH HOH B . L 6 HOH 61 773 773 HOH HOH B . L 6 HOH 62 774 774 HOH HOH B . L 6 HOH 63 775 775 HOH HOH B . L 6 HOH 64 778 778 HOH HOH B . L 6 HOH 65 781 781 HOH HOH B . L 6 HOH 66 783 783 HOH HOH B . L 6 HOH 67 784 784 HOH HOH B . L 6 HOH 68 795 795 HOH HOH B . L 6 HOH 69 796 796 HOH HOH B . L 6 HOH 70 800 800 HOH HOH B . L 6 HOH 71 804 804 HOH HOH B . L 6 HOH 72 805 805 HOH HOH B . L 6 HOH 73 806 806 HOH HOH B . L 6 HOH 74 807 807 HOH HOH B . L 6 HOH 75 808 808 HOH HOH B . L 6 HOH 76 809 809 HOH HOH B . L 6 HOH 77 812 812 HOH HOH B . L 6 HOH 78 819 819 HOH HOH B . L 6 HOH 79 820 820 HOH HOH B . L 6 HOH 80 821 821 HOH HOH B . L 6 HOH 81 824 824 HOH HOH B . L 6 HOH 82 825 825 HOH HOH B . L 6 HOH 83 831 831 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 X-PLOR refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 2NLL _cell.length_a 40.900 _cell.length_b 65.600 _cell.length_c 125.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NLL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 2NLL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_percent_sol 50.0000 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'CRYSTALLIZED FROM 40% PEG 3350 25 MM IMADAZOLE BUFFER, PH 7.0, 400 MM NH4CL, 10 MM DTT, AND 5 MM MGCL2' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'PEG 3350' ? ? ? 1 3 1 IMIDAZOLE ? ? ? 1 4 1 NH4CL ? ? ? 1 5 1 DTT ? ? ? 1 6 1 MGCL2 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 120.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date 1995-01-01 _diffrn_detector.details NONE # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2NLL _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F 2.000 _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.900 _reflns.number_obs 44875 _reflns.number_all ? _reflns.percent_possible_obs 87.000 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.083 _reflns.pdbx_netI_over_sigmaI 18.900 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.000 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.900 _reflns_shell.d_res_low 1.960 _reflns_shell.percent_possible_all 51.00 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.311 _reflns_shell.meanI_over_sigI_obs 4.100 _reflns_shell.pdbx_redundancy 1.500 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2NLL _refine.ls_number_reflns_obs 44875 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.500 _refine.pdbx_data_cutoff_high_absF 10000000.000 _refine.pdbx_data_cutoff_low_absF 0.0010 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.000 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs 87.000 _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.206 _refine.ls_R_factor_R_free 0.269 _refine.ls_R_factor_R_free_error 0.013 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.00 _refine.ls_number_reflns_R_free 449 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1379 _refine_hist.pdbx_number_atoms_nucleic_acid 732 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 236 _refine_hist.number_atoms_total 2352 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 6.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.97 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.98 _refine_ls_shell.number_reflns_R_work 1902 _refine_ls_shell.R_factor_R_work 0.301 _refine_ls_shell.percent_reflns_obs 51.00 _refine_ls_shell.R_factor_R_free 0.391 _refine_ls_shell.R_factor_R_free_error 0.04 _refine_ls_shell.percent_reflns_R_free 10.00 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2NLL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2NLL _struct.title 'RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NLL _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;COMPLEX (TRANSCRIPTION REGULATION-DNA), DNA-BINDING, NUCLEAR PROTEIN, ZINC- FINGER, MULTIGENE FAMILY, ALTERNATIVE SPLICING, RECEPTOR, TRANSCRIPTION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP RXRA_HUMAN P19793 3 135 ? ? 2 UNP THB1_HUMAN P10828 4 104 ? ? 3 PDB 2NLL 2NLL 1 ? ? ? 4 PDB 2NLL 2NLL 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2NLL A 1 ? 66 ? P19793 135 ? 200 ? 135 200 2 2 2NLL B 1 ? 103 ? P10828 104 ? 206 ? 300 402 3 3 2NLL C 1 ? 18 ? 2NLL 502 ? 519 ? 502 519 4 4 2NLL D 1 ? 18 ? 2NLL 521 ? 538 ? 521 538 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 2NLL _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 102 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P10828 _struct_ref_seq_dif.db_mon_id GLN _struct_ref_seq_dif.pdbx_seq_db_seq_num 205 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 401 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU C 19 ? ARG C 30 ? GLU A 153 ARG A 164 1 ? 12 HELX_P HELX_P2 2 GLN C 54 ? ALA C 63 ? GLN A 188 ALA A 197 1 ? 10 HELX_P HELX_P3 3 GLU D 22 ? GLN D 33 ? GLU B 321 GLN B 332 1 ? 12 HELX_P HELX_P4 4 HIS D 37 ? SER D 39 ? HIS B 336 SER B 338 5 ? 3 HELX_P HELX_P5 5 GLN D 59 ? VAL D 69 ? GLN B 358 VAL B 368 1 ? 11 HELX_P HELX_P6 6 THR D 73 ? LEU D 75 ? THR B 372 LEU B 374 5 ? 3 HELX_P HELX_P7 7 ASP D 79 ? GLU D 102 ? ASP B 378 GLU B 401 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DT 9 "O3'" ? ? ? 1_555 A 5IU 10 P ? ? C DT 510 C 5IU 511 1_555 ? ? ? ? ? ? ? 1.562 ? ? covale2 covale both ? A 5IU 10 "O3'" ? ? ? 1_555 A DC 11 P ? ? C 5IU 511 C DC 512 1_555 ? ? ? ? ? ? ? 1.568 ? ? metalc1 metalc ? ? C CYS 1 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 135 A ZN 250 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc2 metalc ? ? C CYS 4 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 138 A ZN 250 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc3 metalc ? ? C CYS 18 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 152 A ZN 250 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc4 metalc ? ? C CYS 21 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 155 A ZN 250 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc5 metalc ? ? C CYS 37 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 171 A ZN 251 1_555 ? ? ? ? ? ? ? 2.319 ? ? metalc6 metalc ? ? C CYS 43 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 177 A ZN 251 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc7 metalc ? ? C CYS 53 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 187 A ZN 251 1_555 ? ? ? ? ? ? ? 2.306 ? ? metalc8 metalc ? ? C CYS 56 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 190 A ZN 251 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc9 metalc ? ? D CYS 4 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 303 B ZN 450 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc10 metalc ? ? D CYS 7 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 306 B ZN 450 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc11 metalc ? ? D CYS 21 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 320 B ZN 450 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc12 metalc ? ? D CYS 24 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 323 B ZN 450 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc13 metalc ? ? D CYS 42 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 341 B ZN 451 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc14 metalc ? ? D CYS 48 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 347 B ZN 451 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc15 metalc ? ? D CYS 58 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 357 B ZN 451 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc16 metalc ? ? D CYS 61 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 360 B ZN 451 1_555 ? ? ? ? ? ? ? 2.261 ? ? hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 17 N3 ? ? C DA 503 D DT 537 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 17 O4 ? ? C DA 503 D DT 537 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 16 N3 ? ? C DG 504 D DC 536 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 16 O2 ? ? C DG 504 D DC 536 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 16 N4 ? ? C DG 504 D DC 536 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 15 N3 ? ? C DG 505 D DC 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 15 O2 ? ? C DG 505 D DC 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 15 N4 ? ? C DG 505 D DC 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 14 N1 ? ? C DT 506 D DA 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 14 N6 ? ? C DT 506 D DA 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 13 N1 ? ? C DC 507 D DG 533 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 13 O6 ? ? C DC 507 D DG 533 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 13 N2 ? ? C DC 507 D DG 533 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 508 D DT 532 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 508 D DT 532 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 11 N1 ? ? C DT 509 D DA 531 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 11 N6 ? ? C DT 509 D DA 531 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 510 D DA 530 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 510 D DA 530 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A 5IU 10 N3 ? ? ? 1_555 B DA 9 N1 ? ? C 5IU 511 D DA 529 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A 5IU 10 O4 ? ? ? 1_555 B DA 9 N6 ? ? C 5IU 511 D DA 529 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 8 N1 ? ? C DC 512 D DG 528 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 8 O6 ? ? C DC 512 D DG 528 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 8 N2 ? ? C DC 512 D DG 528 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 7 N3 ? ? C DA 513 D DT 527 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 7 O4 ? ? C DA 513 D DT 527 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 514 D DC 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 514 D DC 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 514 D DC 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 5 N3 ? ? C DG 515 D DC 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 5 O2 ? ? C DG 515 D DC 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 5 N4 ? ? C DG 515 D DC 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 4 N1 ? ? C DT 516 D DA 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 4 N6 ? ? C DT 516 D DA 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 517 D DG 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 517 D DG 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 517 D DG 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 2 N3 ? ? C DA 518 D DT 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 2 O4 ? ? C DA 518 D DT 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 18 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 519 D DC 521 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 18 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 519 D DC 521 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 18 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 519 D DC 521 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 1 ? A CYS 135 ? 1_555 ZN ? E ZN . ? A ZN 250 ? 1_555 SG ? C CYS 4 ? A CYS 138 ? 1_555 110.0 ? 2 SG ? C CYS 1 ? A CYS 135 ? 1_555 ZN ? E ZN . ? A ZN 250 ? 1_555 SG ? C CYS 18 ? A CYS 152 ? 1_555 118.7 ? 3 SG ? C CYS 4 ? A CYS 138 ? 1_555 ZN ? E ZN . ? A ZN 250 ? 1_555 SG ? C CYS 18 ? A CYS 152 ? 1_555 109.1 ? 4 SG ? C CYS 1 ? A CYS 135 ? 1_555 ZN ? E ZN . ? A ZN 250 ? 1_555 SG ? C CYS 21 ? A CYS 155 ? 1_555 103.2 ? 5 SG ? C CYS 4 ? A CYS 138 ? 1_555 ZN ? E ZN . ? A ZN 250 ? 1_555 SG ? C CYS 21 ? A CYS 155 ? 1_555 117.4 ? 6 SG ? C CYS 18 ? A CYS 152 ? 1_555 ZN ? E ZN . ? A ZN 250 ? 1_555 SG ? C CYS 21 ? A CYS 155 ? 1_555 98.4 ? 7 SG ? C CYS 37 ? A CYS 171 ? 1_555 ZN ? F ZN . ? A ZN 251 ? 1_555 SG ? C CYS 43 ? A CYS 177 ? 1_555 103.1 ? 8 SG ? C CYS 37 ? A CYS 171 ? 1_555 ZN ? F ZN . ? A ZN 251 ? 1_555 SG ? C CYS 53 ? A CYS 187 ? 1_555 119.3 ? 9 SG ? C CYS 43 ? A CYS 177 ? 1_555 ZN ? F ZN . ? A ZN 251 ? 1_555 SG ? C CYS 53 ? A CYS 187 ? 1_555 116.0 ? 10 SG ? C CYS 37 ? A CYS 171 ? 1_555 ZN ? F ZN . ? A ZN 251 ? 1_555 SG ? C CYS 56 ? A CYS 190 ? 1_555 118.0 ? 11 SG ? C CYS 43 ? A CYS 177 ? 1_555 ZN ? F ZN . ? A ZN 251 ? 1_555 SG ? C CYS 56 ? A CYS 190 ? 1_555 95.8 ? 12 SG ? C CYS 53 ? A CYS 187 ? 1_555 ZN ? F ZN . ? A ZN 251 ? 1_555 SG ? C CYS 56 ? A CYS 190 ? 1_555 102.8 ? 13 SG ? D CYS 4 ? B CYS 303 ? 1_555 ZN ? G ZN . ? B ZN 450 ? 1_555 SG ? D CYS 7 ? B CYS 306 ? 1_555 113.7 ? 14 SG ? D CYS 4 ? B CYS 303 ? 1_555 ZN ? G ZN . ? B ZN 450 ? 1_555 SG ? D CYS 21 ? B CYS 320 ? 1_555 110.0 ? 15 SG ? D CYS 7 ? B CYS 306 ? 1_555 ZN ? G ZN . ? B ZN 450 ? 1_555 SG ? D CYS 21 ? B CYS 320 ? 1_555 106.4 ? 16 SG ? D CYS 4 ? B CYS 303 ? 1_555 ZN ? G ZN . ? B ZN 450 ? 1_555 SG ? D CYS 24 ? B CYS 323 ? 1_555 109.4 ? 17 SG ? D CYS 7 ? B CYS 306 ? 1_555 ZN ? G ZN . ? B ZN 450 ? 1_555 SG ? D CYS 24 ? B CYS 323 ? 1_555 111.3 ? 18 SG ? D CYS 21 ? B CYS 320 ? 1_555 ZN ? G ZN . ? B ZN 450 ? 1_555 SG ? D CYS 24 ? B CYS 323 ? 1_555 105.7 ? 19 SG ? D CYS 42 ? B CYS 341 ? 1_555 ZN ? H ZN . ? B ZN 451 ? 1_555 SG ? D CYS 48 ? B CYS 347 ? 1_555 109.9 ? 20 SG ? D CYS 42 ? B CYS 341 ? 1_555 ZN ? H ZN . ? B ZN 451 ? 1_555 SG ? D CYS 58 ? B CYS 357 ? 1_555 113.2 ? 21 SG ? D CYS 48 ? B CYS 347 ? 1_555 ZN ? H ZN . ? B ZN 451 ? 1_555 SG ? D CYS 58 ? B CYS 357 ? 1_555 112.7 ? 22 SG ? D CYS 42 ? B CYS 341 ? 1_555 ZN ? H ZN . ? B ZN 451 ? 1_555 SG ? D CYS 61 ? B CYS 360 ? 1_555 111.8 ? 23 SG ? D CYS 48 ? B CYS 347 ? 1_555 ZN ? H ZN . ? B ZN 451 ? 1_555 SG ? D CYS 61 ? B CYS 360 ? 1_555 102.3 ? 24 SG ? D CYS 58 ? B CYS 357 ? 1_555 ZN ? H ZN . ? B ZN 451 ? 1_555 SG ? D CYS 61 ? B CYS 360 ? 1_555 106.4 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS C 11 ? HIS C 12 ? LYS A 145 HIS A 146 A 2 VAL C 15 ? TYR C 16 ? VAL A 149 TYR A 150 B 1 TYR D 14 ? HIS D 15 ? TYR B 313 HIS B 314 B 2 CYS D 18 ? ILE D 19 ? CYS B 317 ILE B 318 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS C 12 ? N HIS A 146 O VAL C 15 ? O VAL A 149 B 1 2 N HIS D 15 ? N HIS B 314 O CYS D 18 ? O CYS B 317 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 250 ? 4 'BINDING SITE FOR RESIDUE ZN A 250' AC2 Software A ZN 251 ? 4 'BINDING SITE FOR RESIDUE ZN A 251' AC3 Software B ZN 450 ? 4 'BINDING SITE FOR RESIDUE ZN B 450' AC4 Software B ZN 451 ? 4 'BINDING SITE FOR RESIDUE ZN B 451' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 1 ? CYS A 135 . ? 1_555 ? 2 AC1 4 CYS C 4 ? CYS A 138 . ? 1_555 ? 3 AC1 4 CYS C 18 ? CYS A 152 . ? 1_555 ? 4 AC1 4 CYS C 21 ? CYS A 155 . ? 1_555 ? 5 AC2 4 CYS C 37 ? CYS A 171 . ? 1_555 ? 6 AC2 4 CYS C 43 ? CYS A 177 . ? 1_555 ? 7 AC2 4 CYS C 53 ? CYS A 187 . ? 1_555 ? 8 AC2 4 CYS C 56 ? CYS A 190 . ? 1_555 ? 9 AC3 4 CYS D 4 ? CYS B 303 . ? 1_555 ? 10 AC3 4 CYS D 7 ? CYS B 306 . ? 1_555 ? 11 AC3 4 CYS D 21 ? CYS B 320 . ? 1_555 ? 12 AC3 4 CYS D 24 ? CYS B 323 . ? 1_555 ? 13 AC4 4 CYS D 42 ? CYS B 341 . ? 1_555 ? 14 AC4 4 CYS D 48 ? CYS B 347 . ? 1_555 ? 15 AC4 4 CYS D 58 ? CYS B 357 . ? 1_555 ? 16 AC4 4 CYS D 61 ? CYS B 360 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" C DC 502 ? ? "C4'" C DC 502 ? ? 1.560 1.512 0.048 0.007 N 2 1 "O3'" C DC 502 ? ? "C3'" C DC 502 ? ? 1.362 1.419 -0.057 0.006 N 3 1 P C DA 503 ? ? "O5'" C DA 503 ? ? 1.718 1.593 0.125 0.010 N 4 1 "O3'" C DA 503 ? ? P C DG 504 ? ? 1.715 1.607 0.108 0.012 Y 5 1 P C DG 504 ? ? "O5'" C DG 504 ? ? 1.725 1.593 0.132 0.010 N 6 1 "O3'" C DG 504 ? ? "C3'" C DG 504 ? ? 1.534 1.435 0.099 0.013 N 7 1 N7 C DG 504 ? ? C8 C DG 504 ? ? 1.347 1.305 0.042 0.006 N 8 1 "O3'" C DG 504 ? ? P C DG 505 ? ? 1.748 1.607 0.141 0.012 Y 9 1 "O4'" C DG 505 ? ? "C1'" C DG 505 ? ? 1.489 1.420 0.069 0.011 N 10 1 "O3'" C DG 505 ? ? P C DT 506 ? ? 1.691 1.607 0.084 0.012 Y 11 1 C5 C DT 506 ? ? C7 C DT 506 ? ? 1.538 1.496 0.042 0.006 N 12 1 P C DC 507 ? ? "O5'" C DC 507 ? ? 1.663 1.593 0.070 0.010 N 13 1 "O4'" C DA 508 ? ? "C1'" C DA 508 ? ? 1.508 1.420 0.088 0.011 N 14 1 C6 C DA 508 ? ? N1 C DA 508 ? ? 1.309 1.351 -0.042 0.007 N 15 1 P C DT 509 ? ? "O5'" C DT 509 ? ? 1.678 1.593 0.085 0.010 N 16 1 C5 C DT 509 ? ? C7 C DT 509 ? ? 1.535 1.496 0.039 0.006 N 17 1 "O3'" C DT 509 ? ? P C DT 510 ? ? 1.530 1.607 -0.077 0.012 Y 18 1 N1 C DT 510 ? ? C2 C DT 510 ? ? 1.433 1.376 0.057 0.008 N 19 1 P C DA 513 ? ? "O5'" C DA 513 ? ? 1.690 1.593 0.097 0.010 N 20 1 N9 C DA 513 ? ? C4 C DA 513 ? ? 1.425 1.374 0.051 0.006 N 21 1 "O3'" C DG 514 ? ? P C DG 515 ? ? 1.694 1.607 0.087 0.012 Y 22 1 "O4'" C DG 515 ? ? "C1'" C DG 515 ? ? 1.500 1.420 0.080 0.011 N 23 1 "O3'" C DG 515 ? ? P C DT 516 ? ? 1.506 1.607 -0.101 0.012 Y 24 1 P C DT 516 ? ? "O5'" C DT 516 ? ? 1.661 1.593 0.068 0.010 N 25 1 C5 C DT 516 ? ? C7 C DT 516 ? ? 1.434 1.496 -0.062 0.006 N 26 1 P C DC 517 ? ? "O5'" C DC 517 ? ? 1.531 1.593 -0.062 0.010 N 27 1 "C5'" C DA 518 ? ? "C4'" C DA 518 ? ? 1.558 1.512 0.046 0.007 N 28 1 P D DT 522 ? ? "O5'" D DT 522 ? ? 1.522 1.593 -0.071 0.010 N 29 1 "C5'" D DT 522 ? ? "C4'" D DT 522 ? ? 1.555 1.512 0.043 0.007 N 30 1 C5 D DT 522 ? ? C7 D DT 522 ? ? 1.542 1.496 0.046 0.006 N 31 1 "O3'" D DG 523 ? ? P D DA 524 ? ? 1.528 1.607 -0.079 0.012 Y 32 1 P D DA 524 ? ? "O5'" D DA 524 ? ? 1.691 1.593 0.098 0.010 N 33 1 C6 D DA 524 ? ? N1 D DA 524 ? ? 1.296 1.351 -0.055 0.007 N 34 1 N9 D DA 524 ? ? C4 D DA 524 ? ? 1.460 1.374 0.086 0.006 N 35 1 C4 D DC 525 ? ? C5 D DC 525 ? ? 1.473 1.425 0.048 0.008 N 36 1 "O3'" D DC 526 ? ? "C3'" D DC 526 ? ? 1.360 1.419 -0.059 0.006 N 37 1 N1 D DC 526 ? ? C2 D DC 526 ? ? 1.335 1.397 -0.062 0.010 N 38 1 C2 D DC 526 ? ? N3 D DC 526 ? ? 1.417 1.353 0.064 0.008 N 39 1 C5 D DC 526 ? ? C6 D DC 526 ? ? 1.393 1.339 0.054 0.008 N 40 1 C4 D DT 527 ? ? C5 D DT 527 ? ? 1.502 1.445 0.057 0.009 N 41 1 C5 D DT 527 ? ? C7 D DT 527 ? ? 1.537 1.496 0.041 0.006 N 42 1 "O3'" D DT 527 ? ? P D DG 528 ? ? 1.505 1.607 -0.102 0.012 Y 43 1 P D DA 529 ? ? "O5'" D DA 529 ? ? 1.655 1.593 0.062 0.010 N 44 1 "O3'" D DA 529 ? ? "C3'" D DA 529 ? ? 1.376 1.419 -0.043 0.006 N 45 1 N1 D DA 530 ? ? C2 D DA 530 ? ? 1.285 1.339 -0.054 0.009 N 46 1 C4 D DA 530 ? ? C5 D DA 530 ? ? 1.327 1.383 -0.056 0.007 N 47 1 N9 D DA 531 ? ? C4 D DA 531 ? ? 1.435 1.374 0.061 0.006 N 48 1 C6 D DA 531 ? ? N6 D DA 531 ? ? 1.276 1.335 -0.059 0.008 N 49 1 "O3'" D DT 532 ? ? P D DG 533 ? ? 1.690 1.607 0.083 0.012 Y 50 1 "O3'" D DC 535 ? ? "C3'" D DC 535 ? ? 1.374 1.419 -0.045 0.006 N 51 1 P D DT 537 ? ? "O5'" D DT 537 ? ? 1.659 1.593 0.066 0.010 N 52 1 N1 D DT 537 ? ? C2 D DT 537 ? ? 1.447 1.376 0.071 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C4'" C DC 502 ? ? "C3'" C DC 502 ? ? "C2'" C DC 502 ? ? 108.57 103.10 5.47 0.90 N 2 1 "C3'" C DA 503 ? ? "O3'" C DA 503 ? ? P C DG 504 ? ? 130.30 119.70 10.60 1.20 Y 3 1 "O4'" C DG 504 ? ? "C1'" C DG 504 ? ? N9 C DG 504 ? ? 110.38 108.30 2.08 0.30 N 4 1 "C4'" C DT 506 ? ? "C3'" C DT 506 ? ? "C2'" C DT 506 ? ? 109.64 103.10 6.54 0.90 N 5 1 "O4'" C DT 506 ? ? "C1'" C DT 506 ? ? N1 C DT 506 ? ? 111.18 108.30 2.88 0.30 N 6 1 C5 C DT 506 ? ? C6 C DT 506 ? ? N1 C DT 506 ? ? 119.88 123.70 -3.82 0.60 N 7 1 "C3'" C DT 506 ? ? "O3'" C DT 506 ? ? P C DC 507 ? ? 107.97 119.70 -11.73 1.20 Y 8 1 "O4'" C DC 507 ? ? "C1'" C DC 507 ? ? N1 C DC 507 ? ? 110.51 108.30 2.21 0.30 N 9 1 "C3'" C DC 507 ? ? "O3'" C DC 507 ? ? P C DA 508 ? ? 131.99 119.70 12.29 1.20 Y 10 1 "C3'" C DA 508 ? ? "O3'" C DA 508 ? ? P C DT 509 ? ? 127.02 119.70 7.32 1.20 Y 11 1 "C4'" C DT 509 ? ? "C3'" C DT 509 ? ? "C2'" C DT 509 ? ? 108.54 103.10 5.44 0.90 N 12 1 "C3'" C DT 509 ? ? "O3'" C DT 509 ? ? P C DT 510 ? ? 138.55 119.70 18.85 1.20 Y 13 1 "C3'" C DT 510 ? ? "O3'" C DT 510 ? ? P C 5IU 511 ? ? 128.17 119.70 8.47 1.20 Y 14 1 "C3'" C 5IU 511 ? ? "O3'" C 5IU 511 ? ? P C DC 512 ? ? 127.11 119.70 7.41 1.20 Y 15 1 C2 C DC 512 ? ? N3 C DC 512 ? ? C4 C DC 512 ? ? 122.93 119.90 3.03 0.50 N 16 1 "C3'" C DA 513 ? ? "O3'" C DA 513 ? ? P C DG 514 ? ? 128.87 119.70 9.17 1.20 Y 17 1 "C3'" C DG 514 ? ? "O3'" C DG 514 ? ? P C DG 515 ? ? 126.91 119.70 7.21 1.20 Y 18 1 "C4'" C DG 515 ? ? "C3'" C DG 515 ? ? "C2'" C DG 515 ? ? 108.65 103.10 5.55 0.90 N 19 1 C4 C DT 516 ? ? C5 C DT 516 ? ? C6 C DT 516 ? ? 122.03 118.00 4.03 0.60 N 20 1 "C3'" C DC 517 ? ? "O3'" C DC 517 ? ? P C DA 518 ? ? 131.95 119.70 12.25 1.20 Y 21 1 "C3'" C DA 518 ? ? "O3'" C DA 518 ? ? P C DG 519 ? ? 133.32 119.70 13.62 1.20 Y 22 1 N1 C DG 519 ? ? C6 C DG 519 ? ? O6 C DG 519 ? ? 115.59 119.90 -4.31 0.60 N 23 1 C5 C DG 519 ? ? C6 C DG 519 ? ? O6 C DG 519 ? ? 132.76 128.60 4.16 0.60 N 24 1 "C3'" D DC 521 ? ? "O3'" D DC 521 ? ? P D DT 522 ? ? 143.22 119.70 23.52 1.20 Y 25 1 N1 D DT 522 ? ? C2 D DT 522 ? ? N3 D DT 522 ? ? 118.87 114.60 4.27 0.60 N 26 1 C4 D DT 522 ? ? C5 D DT 522 ? ? C6 D DT 522 ? ? 121.70 118.00 3.70 0.60 N 27 1 N3 D DT 522 ? ? C2 D DT 522 ? ? O2 D DT 522 ? ? 118.21 122.30 -4.09 0.60 N 28 1 "C3'" D DT 522 ? ? "O3'" D DT 522 ? ? P D DG 523 ? ? 129.64 119.70 9.94 1.20 Y 29 1 "C3'" D DG 523 ? ? "O3'" D DG 523 ? ? P D DA 524 ? ? 132.07 119.70 12.37 1.20 Y 30 1 C5 D DA 524 ? ? N7 D DA 524 ? ? C8 D DA 524 ? ? 107.20 103.90 3.30 0.50 N 31 1 "C3'" D DA 524 ? ? "O3'" D DA 524 ? ? P D DC 525 ? ? 127.46 119.70 7.76 1.20 Y 32 1 "C3'" D DC 525 ? ? "O3'" D DC 525 ? ? P D DC 526 ? ? 130.88 119.70 11.18 1.20 Y 33 1 "C3'" D DC 526 ? ? "O3'" D DC 526 ? ? P D DT 527 ? ? 127.74 119.70 8.04 1.20 Y 34 1 C4 D DT 527 ? ? C5 D DT 527 ? ? C6 D DT 527 ? ? 121.63 118.00 3.63 0.60 N 35 1 C6 D DT 527 ? ? C5 D DT 527 ? ? C7 D DT 527 ? ? 118.49 122.90 -4.41 0.60 N 36 1 "C3'" D DT 527 ? ? "O3'" D DT 527 ? ? P D DG 528 ? ? 129.31 119.70 9.61 1.20 Y 37 1 "C3'" D DA 529 ? ? "O3'" D DA 529 ? ? P D DA 530 ? ? 134.14 119.70 14.44 1.20 Y 38 1 "C3'" D DA 530 ? ? "O3'" D DA 530 ? ? P D DA 531 ? ? 134.46 119.70 14.76 1.20 Y 39 1 "C3'" D DA 531 ? ? "O3'" D DA 531 ? ? P D DT 532 ? ? 128.44 119.70 8.74 1.20 Y 40 1 N1 D DT 532 ? ? C2 D DT 532 ? ? N3 D DT 532 ? ? 119.08 114.60 4.48 0.60 N 41 1 C4 D DT 532 ? ? C5 D DT 532 ? ? C6 D DT 532 ? ? 121.64 118.00 3.64 0.60 N 42 1 N3 D DT 532 ? ? C2 D DT 532 ? ? O2 D DT 532 ? ? 118.39 122.30 -3.91 0.60 N 43 1 "C3'" D DT 532 ? ? "O3'" D DT 532 ? ? P D DG 533 ? ? 129.87 119.70 10.17 1.20 Y 44 1 "C3'" D DG 533 ? ? "C2'" D DG 533 ? ? "C1'" D DG 533 ? ? 96.20 102.40 -6.20 0.80 N 45 1 N1 D DG 533 ? ? C6 D DG 533 ? ? O6 D DG 533 ? ? 123.73 119.90 3.83 0.60 N 46 1 C5 D DG 533 ? ? C6 D DG 533 ? ? O6 D DG 533 ? ? 123.72 128.60 -4.88 0.60 N 47 1 "O4'" D DC 535 ? ? "C1'" D DC 535 ? ? N1 D DC 535 ? ? 110.53 108.30 2.23 0.30 N 48 1 "C3'" D DC 535 ? ? "O3'" D DC 535 ? ? P D DC 536 ? ? 130.38 119.70 10.68 1.20 Y 49 1 "O4'" D DC 536 ? ? "C1'" D DC 536 ? ? N1 D DC 536 ? ? 110.55 108.30 2.25 0.30 N 50 1 C4 D DT 537 ? ? C5 D DT 537 ? ? C6 D DT 537 ? ? 122.20 118.00 4.20 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 138 ? ? -95.73 -145.72 2 1 SER A 143 ? ? -86.87 42.30 3 1 TYR A 147 ? ? 53.65 -84.71 4 1 THR A 162 ? ? -44.43 -73.84 5 1 ARG A 164 ? ? -63.75 -88.86 6 1 LEU A 167 ? ? -137.73 -144.66 7 1 ASP A 173 ? ? -116.73 -111.64 8 1 ASN A 174 ? ? -149.65 58.60 9 1 LYS A 175 ? ? 30.14 64.07 10 1 CYS A 177 ? ? -43.34 107.91 11 1 GLU B 301 ? ? 176.34 -58.04 12 1 ARG B 316 ? ? 78.36 -3.46 13 1 TYR B 343 ? ? -142.03 -115.74 14 1 LYS B 351 ? ? -49.72 -11.52 15 1 ARG B 392 ? ? -50.18 0.46 16 1 GLU B 393 ? ? -68.63 7.40 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA C 503 ? ? 0.106 'SIDE CHAIN' 2 1 DG C 505 ? ? 0.059 'SIDE CHAIN' 3 1 DC C 507 ? ? 0.100 'SIDE CHAIN' 4 1 DA C 518 ? ? 0.083 'SIDE CHAIN' 5 1 DA D 524 ? ? 0.074 'SIDE CHAIN' 6 1 DA D 529 ? ? 0.067 'SIDE CHAIN' 7 1 DA D 531 ? ? 0.100 'SIDE CHAIN' 8 1 DG D 533 ? ? 0.063 'SIDE CHAIN' 9 1 DG D 538 ? ? 0.064 'SIDE CHAIN' # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 5IU _pdbx_struct_mod_residue.label_seq_id 10 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id 5IU _pdbx_struct_mod_residue.auth_seq_id 511 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DU _pdbx_struct_mod_residue.details "5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5IU N1 N N N 1 5IU C2 C N N 2 5IU N3 N N N 3 5IU C4 C N N 4 5IU C5 C N N 5 5IU C6 C N N 6 5IU O2 O N N 7 5IU O4 O N N 8 5IU I5 I N N 9 5IU "C1'" C N R 10 5IU "C2'" C N N 11 5IU "C3'" C N S 12 5IU "C4'" C N R 13 5IU "O3'" O N N 14 5IU "O4'" O N N 15 5IU "C5'" C N N 16 5IU "O5'" O N N 17 5IU P P N N 18 5IU OP1 O N N 19 5IU OP2 O N N 20 5IU OP3 O N N 21 5IU HN3 H N N 22 5IU H6 H N N 23 5IU "H1'" H N N 24 5IU "H2'" H N N 25 5IU "H2''" H N N 26 5IU "H3'" H N N 27 5IU "H4'" H N N 28 5IU "HO3'" H N N 29 5IU "H5'" H N N 30 5IU "H5''" H N N 31 5IU HOP2 H N N 32 5IU HOP3 H N N 33 ALA N N N N 34 ALA CA C N S 35 ALA C C N N 36 ALA O O N N 37 ALA CB C N N 38 ALA OXT O N N 39 ALA H H N N 40 ALA H2 H N N 41 ALA HA H N N 42 ALA HB1 H N N 43 ALA HB2 H N N 44 ALA HB3 H N N 45 ALA HXT H N N 46 ARG N N N N 47 ARG CA C N S 48 ARG C C N N 49 ARG O O N N 50 ARG CB C N N 51 ARG CG C N N 52 ARG CD C N N 53 ARG NE N N N 54 ARG CZ C N N 55 ARG NH1 N N N 56 ARG NH2 N N N 57 ARG OXT O N N 58 ARG H H N N 59 ARG H2 H N N 60 ARG HA H N N 61 ARG HB2 H N N 62 ARG HB3 H N N 63 ARG HG2 H N N 64 ARG HG3 H N N 65 ARG HD2 H N N 66 ARG HD3 H N N 67 ARG HE H N N 68 ARG HH11 H N N 69 ARG HH12 H N N 70 ARG HH21 H N N 71 ARG HH22 H N N 72 ARG HXT H N N 73 ASN N N N N 74 ASN CA C N S 75 ASN C C N N 76 ASN O O N N 77 ASN CB C N N 78 ASN CG C N N 79 ASN OD1 O N N 80 ASN ND2 N N N 81 ASN OXT O N N 82 ASN H H N N 83 ASN H2 H N N 84 ASN HA H N N 85 ASN HB2 H N N 86 ASN HB3 H N N 87 ASN HD21 H N N 88 ASN HD22 H N N 89 ASN HXT H N N 90 ASP N N N N 91 ASP CA C N S 92 ASP C C N N 93 ASP O O N N 94 ASP CB C N N 95 ASP CG C N N 96 ASP OD1 O N N 97 ASP OD2 O N N 98 ASP OXT O N N 99 ASP H H N N 100 ASP H2 H N N 101 ASP HA H N N 102 ASP HB2 H N N 103 ASP HB3 H N N 104 ASP HD2 H N N 105 ASP HXT H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 DA OP3 O N N 121 DA P P N N 122 DA OP1 O N N 123 DA OP2 O N N 124 DA "O5'" O N N 125 DA "C5'" C N N 126 DA "C4'" C N R 127 DA "O4'" O N N 128 DA "C3'" C N S 129 DA "O3'" O N N 130 DA "C2'" C N N 131 DA "C1'" C N R 132 DA N9 N Y N 133 DA C8 C Y N 134 DA N7 N Y N 135 DA C5 C Y N 136 DA C6 C Y N 137 DA N6 N N N 138 DA N1 N Y N 139 DA C2 C Y N 140 DA N3 N Y N 141 DA C4 C Y N 142 DA HOP3 H N N 143 DA HOP2 H N N 144 DA "H5'" H N N 145 DA "H5''" H N N 146 DA "H4'" H N N 147 DA "H3'" H N N 148 DA "HO3'" H N N 149 DA "H2'" H N N 150 DA "H2''" H N N 151 DA "H1'" H N N 152 DA H8 H N N 153 DA H61 H N N 154 DA H62 H N N 155 DA H2 H N N 156 DC OP3 O N N 157 DC P P N N 158 DC OP1 O N N 159 DC OP2 O N N 160 DC "O5'" O N N 161 DC "C5'" C N N 162 DC "C4'" C N R 163 DC "O4'" O N N 164 DC "C3'" C N S 165 DC "O3'" O N N 166 DC "C2'" C N N 167 DC "C1'" C N R 168 DC N1 N N N 169 DC C2 C N N 170 DC O2 O N N 171 DC N3 N N N 172 DC C4 C N N 173 DC N4 N N N 174 DC C5 C N N 175 DC C6 C N N 176 DC HOP3 H N N 177 DC HOP2 H N N 178 DC "H5'" H N N 179 DC "H5''" H N N 180 DC "H4'" H N N 181 DC "H3'" H N N 182 DC "HO3'" H N N 183 DC "H2'" H N N 184 DC "H2''" H N N 185 DC "H1'" H N N 186 DC H41 H N N 187 DC H42 H N N 188 DC H5 H N N 189 DC H6 H N N 190 DG OP3 O N N 191 DG P P N N 192 DG OP1 O N N 193 DG OP2 O N N 194 DG "O5'" O N N 195 DG "C5'" C N N 196 DG "C4'" C N R 197 DG "O4'" O N N 198 DG "C3'" C N S 199 DG "O3'" O N N 200 DG "C2'" C N N 201 DG "C1'" C N R 202 DG N9 N Y N 203 DG C8 C Y N 204 DG N7 N Y N 205 DG C5 C Y N 206 DG C6 C N N 207 DG O6 O N N 208 DG N1 N N N 209 DG C2 C N N 210 DG N2 N N N 211 DG N3 N N N 212 DG C4 C Y N 213 DG HOP3 H N N 214 DG HOP2 H N N 215 DG "H5'" H N N 216 DG "H5''" H N N 217 DG "H4'" H N N 218 DG "H3'" H N N 219 DG "HO3'" H N N 220 DG "H2'" H N N 221 DG "H2''" H N N 222 DG "H1'" H N N 223 DG H8 H N N 224 DG H1 H N N 225 DG H21 H N N 226 DG H22 H N N 227 DT OP3 O N N 228 DT P P N N 229 DT OP1 O N N 230 DT OP2 O N N 231 DT "O5'" O N N 232 DT "C5'" C N N 233 DT "C4'" C N R 234 DT "O4'" O N N 235 DT "C3'" C N S 236 DT "O3'" O N N 237 DT "C2'" C N N 238 DT "C1'" C N R 239 DT N1 N N N 240 DT C2 C N N 241 DT O2 O N N 242 DT N3 N N N 243 DT C4 C N N 244 DT O4 O N N 245 DT C5 C N N 246 DT C7 C N N 247 DT C6 C N N 248 DT HOP3 H N N 249 DT HOP2 H N N 250 DT "H5'" H N N 251 DT "H5''" H N N 252 DT "H4'" H N N 253 DT "H3'" H N N 254 DT "HO3'" H N N 255 DT "H2'" H N N 256 DT "H2''" H N N 257 DT "H1'" H N N 258 DT H3 H N N 259 DT H71 H N N 260 DT H72 H N N 261 DT H73 H N N 262 DT H6 H N N 263 GLN N N N N 264 GLN CA C N S 265 GLN C C N N 266 GLN O O N N 267 GLN CB C N N 268 GLN CG C N N 269 GLN CD C N N 270 GLN OE1 O N N 271 GLN NE2 N N N 272 GLN OXT O N N 273 GLN H H N N 274 GLN H2 H N N 275 GLN HA H N N 276 GLN HB2 H N N 277 GLN HB3 H N N 278 GLN HG2 H N N 279 GLN HG3 H N N 280 GLN HE21 H N N 281 GLN HE22 H N N 282 GLN HXT H N N 283 GLU N N N N 284 GLU CA C N S 285 GLU C C N N 286 GLU O O N N 287 GLU CB C N N 288 GLU CG C N N 289 GLU CD C N N 290 GLU OE1 O N N 291 GLU OE2 O N N 292 GLU OXT O N N 293 GLU H H N N 294 GLU H2 H N N 295 GLU HA H N N 296 GLU HB2 H N N 297 GLU HB3 H N N 298 GLU HG2 H N N 299 GLU HG3 H N N 300 GLU HE2 H N N 301 GLU HXT H N N 302 GLY N N N N 303 GLY CA C N N 304 GLY C C N N 305 GLY O O N N 306 GLY OXT O N N 307 GLY H H N N 308 GLY H2 H N N 309 GLY HA2 H N N 310 GLY HA3 H N N 311 GLY HXT H N N 312 HIS N N N N 313 HIS CA C N S 314 HIS C C N N 315 HIS O O N N 316 HIS CB C N N 317 HIS CG C Y N 318 HIS ND1 N Y N 319 HIS CD2 C Y N 320 HIS CE1 C Y N 321 HIS NE2 N Y N 322 HIS OXT O N N 323 HIS H H N N 324 HIS H2 H N N 325 HIS HA H N N 326 HIS HB2 H N N 327 HIS HB3 H N N 328 HIS HD1 H N N 329 HIS HD2 H N N 330 HIS HE1 H N N 331 HIS HE2 H N N 332 HIS HXT H N N 333 HOH O O N N 334 HOH H1 H N N 335 HOH H2 H N N 336 ILE N N N N 337 ILE CA C N S 338 ILE C C N N 339 ILE O O N N 340 ILE CB C N S 341 ILE CG1 C N N 342 ILE CG2 C N N 343 ILE CD1 C N N 344 ILE OXT O N N 345 ILE H H N N 346 ILE H2 H N N 347 ILE HA H N N 348 ILE HB H N N 349 ILE HG12 H N N 350 ILE HG13 H N N 351 ILE HG21 H N N 352 ILE HG22 H N N 353 ILE HG23 H N N 354 ILE HD11 H N N 355 ILE HD12 H N N 356 ILE HD13 H N N 357 ILE HXT H N N 358 LEU N N N N 359 LEU CA C N S 360 LEU C C N N 361 LEU O O N N 362 LEU CB C N N 363 LEU CG C N N 364 LEU CD1 C N N 365 LEU CD2 C N N 366 LEU OXT O N N 367 LEU H H N N 368 LEU H2 H N N 369 LEU HA H N N 370 LEU HB2 H N N 371 LEU HB3 H N N 372 LEU HG H N N 373 LEU HD11 H N N 374 LEU HD12 H N N 375 LEU HD13 H N N 376 LEU HD21 H N N 377 LEU HD22 H N N 378 LEU HD23 H N N 379 LEU HXT H N N 380 LYS N N N N 381 LYS CA C N S 382 LYS C C N N 383 LYS O O N N 384 LYS CB C N N 385 LYS CG C N N 386 LYS CD C N N 387 LYS CE C N N 388 LYS NZ N N N 389 LYS OXT O N N 390 LYS H H N N 391 LYS H2 H N N 392 LYS HA H N N 393 LYS HB2 H N N 394 LYS HB3 H N N 395 LYS HG2 H N N 396 LYS HG3 H N N 397 LYS HD2 H N N 398 LYS HD3 H N N 399 LYS HE2 H N N 400 LYS HE3 H N N 401 LYS HZ1 H N N 402 LYS HZ2 H N N 403 LYS HZ3 H N N 404 LYS HXT H N N 405 MET N N N N 406 MET CA C N S 407 MET C C N N 408 MET O O N N 409 MET CB C N N 410 MET CG C N N 411 MET SD S N N 412 MET CE C N N 413 MET OXT O N N 414 MET H H N N 415 MET H2 H N N 416 MET HA H N N 417 MET HB2 H N N 418 MET HB3 H N N 419 MET HG2 H N N 420 MET HG3 H N N 421 MET HE1 H N N 422 MET HE2 H N N 423 MET HE3 H N N 424 MET HXT H N N 425 PHE N N N N 426 PHE CA C N S 427 PHE C C N N 428 PHE O O N N 429 PHE CB C N N 430 PHE CG C Y N 431 PHE CD1 C Y N 432 PHE CD2 C Y N 433 PHE CE1 C Y N 434 PHE CE2 C Y N 435 PHE CZ C Y N 436 PHE OXT O N N 437 PHE H H N N 438 PHE H2 H N N 439 PHE HA H N N 440 PHE HB2 H N N 441 PHE HB3 H N N 442 PHE HD1 H N N 443 PHE HD2 H N N 444 PHE HE1 H N N 445 PHE HE2 H N N 446 PHE HZ H N N 447 PHE HXT H N N 448 PRO N N N N 449 PRO CA C N S 450 PRO C C N N 451 PRO O O N N 452 PRO CB C N N 453 PRO CG C N N 454 PRO CD C N N 455 PRO OXT O N N 456 PRO H H N N 457 PRO HA H N N 458 PRO HB2 H N N 459 PRO HB3 H N N 460 PRO HG2 H N N 461 PRO HG3 H N N 462 PRO HD2 H N N 463 PRO HD3 H N N 464 PRO HXT H N N 465 SER N N N N 466 SER CA C N S 467 SER C C N N 468 SER O O N N 469 SER CB C N N 470 SER OG O N N 471 SER OXT O N N 472 SER H H N N 473 SER H2 H N N 474 SER HA H N N 475 SER HB2 H N N 476 SER HB3 H N N 477 SER HG H N N 478 SER HXT H N N 479 THR N N N N 480 THR CA C N S 481 THR C C N N 482 THR O O N N 483 THR CB C N R 484 THR OG1 O N N 485 THR CG2 C N N 486 THR OXT O N N 487 THR H H N N 488 THR H2 H N N 489 THR HA H N N 490 THR HB H N N 491 THR HG1 H N N 492 THR HG21 H N N 493 THR HG22 H N N 494 THR HG23 H N N 495 THR HXT H N N 496 TYR N N N N 497 TYR CA C N S 498 TYR C C N N 499 TYR O O N N 500 TYR CB C N N 501 TYR CG C Y N 502 TYR CD1 C Y N 503 TYR CD2 C Y N 504 TYR CE1 C Y N 505 TYR CE2 C Y N 506 TYR CZ C Y N 507 TYR OH O N N 508 TYR OXT O N N 509 TYR H H N N 510 TYR H2 H N N 511 TYR HA H N N 512 TYR HB2 H N N 513 TYR HB3 H N N 514 TYR HD1 H N N 515 TYR HD2 H N N 516 TYR HE1 H N N 517 TYR HE2 H N N 518 TYR HH H N N 519 TYR HXT H N N 520 VAL N N N N 521 VAL CA C N S 522 VAL C C N N 523 VAL O O N N 524 VAL CB C N N 525 VAL CG1 C N N 526 VAL CG2 C N N 527 VAL OXT O N N 528 VAL H H N N 529 VAL H2 H N N 530 VAL HA H N N 531 VAL HB H N N 532 VAL HG11 H N N 533 VAL HG12 H N N 534 VAL HG13 H N N 535 VAL HG21 H N N 536 VAL HG22 H N N 537 VAL HG23 H N N 538 VAL HXT H N N 539 ZN ZN ZN N N 540 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5IU N1 C2 sing N N 1 5IU N1 C6 sing N N 2 5IU N1 "C1'" sing N N 3 5IU C2 N3 sing N N 4 5IU C2 O2 doub N N 5 5IU N3 C4 sing N N 6 5IU N3 HN3 sing N N 7 5IU C4 C5 sing N N 8 5IU C4 O4 doub N N 9 5IU C5 C6 doub N N 10 5IU C5 I5 sing N N 11 5IU C6 H6 sing N N 12 5IU "C1'" "C2'" sing N N 13 5IU "C1'" "O4'" sing N N 14 5IU "C1'" "H1'" sing N N 15 5IU "C2'" "C3'" sing N N 16 5IU "C2'" "H2'" sing N N 17 5IU "C2'" "H2''" sing N N 18 5IU "C3'" "C4'" sing N N 19 5IU "C3'" "O3'" sing N N 20 5IU "C3'" "H3'" sing N N 21 5IU "C4'" "O4'" sing N N 22 5IU "C4'" "C5'" sing N N 23 5IU "C4'" "H4'" sing N N 24 5IU "O3'" "HO3'" sing N N 25 5IU "C5'" "O5'" sing N N 26 5IU "C5'" "H5'" sing N N 27 5IU "C5'" "H5''" sing N N 28 5IU "O5'" P sing N N 29 5IU P OP1 doub N N 30 5IU P OP2 sing N N 31 5IU P OP3 sing N N 32 5IU OP2 HOP2 sing N N 33 5IU OP3 HOP3 sing N N 34 ALA N CA sing N N 35 ALA N H sing N N 36 ALA N H2 sing N N 37 ALA CA C sing N N 38 ALA CA CB sing N N 39 ALA CA HA sing N N 40 ALA C O doub N N 41 ALA C OXT sing N N 42 ALA CB HB1 sing N N 43 ALA CB HB2 sing N N 44 ALA CB HB3 sing N N 45 ALA OXT HXT sing N N 46 ARG N CA sing N N 47 ARG N H sing N N 48 ARG N H2 sing N N 49 ARG CA C sing N N 50 ARG CA CB sing N N 51 ARG CA HA sing N N 52 ARG C O doub N N 53 ARG C OXT sing N N 54 ARG CB CG sing N N 55 ARG CB HB2 sing N N 56 ARG CB HB3 sing N N 57 ARG CG CD sing N N 58 ARG CG HG2 sing N N 59 ARG CG HG3 sing N N 60 ARG CD NE sing N N 61 ARG CD HD2 sing N N 62 ARG CD HD3 sing N N 63 ARG NE CZ sing N N 64 ARG NE HE sing N N 65 ARG CZ NH1 sing N N 66 ARG CZ NH2 doub N N 67 ARG NH1 HH11 sing N N 68 ARG NH1 HH12 sing N N 69 ARG NH2 HH21 sing N N 70 ARG NH2 HH22 sing N N 71 ARG OXT HXT sing N N 72 ASN N CA sing N N 73 ASN N H sing N N 74 ASN N H2 sing N N 75 ASN CA C sing N N 76 ASN CA CB sing N N 77 ASN CA HA sing N N 78 ASN C O doub N N 79 ASN C OXT sing N N 80 ASN CB CG sing N N 81 ASN CB HB2 sing N N 82 ASN CB HB3 sing N N 83 ASN CG OD1 doub N N 84 ASN CG ND2 sing N N 85 ASN ND2 HD21 sing N N 86 ASN ND2 HD22 sing N N 87 ASN OXT HXT sing N N 88 ASP N CA sing N N 89 ASP N H sing N N 90 ASP N H2 sing N N 91 ASP CA C sing N N 92 ASP CA CB sing N N 93 ASP CA HA sing N N 94 ASP C O doub N N 95 ASP C OXT sing N N 96 ASP CB CG sing N N 97 ASP CB HB2 sing N N 98 ASP CB HB3 sing N N 99 ASP CG OD1 doub N N 100 ASP CG OD2 sing N N 101 ASP OD2 HD2 sing N N 102 ASP OXT HXT sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DA OP3 P sing N N 117 DA OP3 HOP3 sing N N 118 DA P OP1 doub N N 119 DA P OP2 sing N N 120 DA P "O5'" sing N N 121 DA OP2 HOP2 sing N N 122 DA "O5'" "C5'" sing N N 123 DA "C5'" "C4'" sing N N 124 DA "C5'" "H5'" sing N N 125 DA "C5'" "H5''" sing N N 126 DA "C4'" "O4'" sing N N 127 DA "C4'" "C3'" sing N N 128 DA "C4'" "H4'" sing N N 129 DA "O4'" "C1'" sing N N 130 DA "C3'" "O3'" sing N N 131 DA "C3'" "C2'" sing N N 132 DA "C3'" "H3'" sing N N 133 DA "O3'" "HO3'" sing N N 134 DA "C2'" "C1'" sing N N 135 DA "C2'" "H2'" sing N N 136 DA "C2'" "H2''" sing N N 137 DA "C1'" N9 sing N N 138 DA "C1'" "H1'" sing N N 139 DA N9 C8 sing Y N 140 DA N9 C4 sing Y N 141 DA C8 N7 doub Y N 142 DA C8 H8 sing N N 143 DA N7 C5 sing Y N 144 DA C5 C6 sing Y N 145 DA C5 C4 doub Y N 146 DA C6 N6 sing N N 147 DA C6 N1 doub Y N 148 DA N6 H61 sing N N 149 DA N6 H62 sing N N 150 DA N1 C2 sing Y N 151 DA C2 N3 doub Y N 152 DA C2 H2 sing N N 153 DA N3 C4 sing Y N 154 DC OP3 P sing N N 155 DC OP3 HOP3 sing N N 156 DC P OP1 doub N N 157 DC P OP2 sing N N 158 DC P "O5'" sing N N 159 DC OP2 HOP2 sing N N 160 DC "O5'" "C5'" sing N N 161 DC "C5'" "C4'" sing N N 162 DC "C5'" "H5'" sing N N 163 DC "C5'" "H5''" sing N N 164 DC "C4'" "O4'" sing N N 165 DC "C4'" "C3'" sing N N 166 DC "C4'" "H4'" sing N N 167 DC "O4'" "C1'" sing N N 168 DC "C3'" "O3'" sing N N 169 DC "C3'" "C2'" sing N N 170 DC "C3'" "H3'" sing N N 171 DC "O3'" "HO3'" sing N N 172 DC "C2'" "C1'" sing N N 173 DC "C2'" "H2'" sing N N 174 DC "C2'" "H2''" sing N N 175 DC "C1'" N1 sing N N 176 DC "C1'" "H1'" sing N N 177 DC N1 C2 sing N N 178 DC N1 C6 sing N N 179 DC C2 O2 doub N N 180 DC C2 N3 sing N N 181 DC N3 C4 doub N N 182 DC C4 N4 sing N N 183 DC C4 C5 sing N N 184 DC N4 H41 sing N N 185 DC N4 H42 sing N N 186 DC C5 C6 doub N N 187 DC C5 H5 sing N N 188 DC C6 H6 sing N N 189 DG OP3 P sing N N 190 DG OP3 HOP3 sing N N 191 DG P OP1 doub N N 192 DG P OP2 sing N N 193 DG P "O5'" sing N N 194 DG OP2 HOP2 sing N N 195 DG "O5'" "C5'" sing N N 196 DG "C5'" "C4'" sing N N 197 DG "C5'" "H5'" sing N N 198 DG "C5'" "H5''" sing N N 199 DG "C4'" "O4'" sing N N 200 DG "C4'" "C3'" sing N N 201 DG "C4'" "H4'" sing N N 202 DG "O4'" "C1'" sing N N 203 DG "C3'" "O3'" sing N N 204 DG "C3'" "C2'" sing N N 205 DG "C3'" "H3'" sing N N 206 DG "O3'" "HO3'" sing N N 207 DG "C2'" "C1'" sing N N 208 DG "C2'" "H2'" sing N N 209 DG "C2'" "H2''" sing N N 210 DG "C1'" N9 sing N N 211 DG "C1'" "H1'" sing N N 212 DG N9 C8 sing Y N 213 DG N9 C4 sing Y N 214 DG C8 N7 doub Y N 215 DG C8 H8 sing N N 216 DG N7 C5 sing Y N 217 DG C5 C6 sing N N 218 DG C5 C4 doub Y N 219 DG C6 O6 doub N N 220 DG C6 N1 sing N N 221 DG N1 C2 sing N N 222 DG N1 H1 sing N N 223 DG C2 N2 sing N N 224 DG C2 N3 doub N N 225 DG N2 H21 sing N N 226 DG N2 H22 sing N N 227 DG N3 C4 sing N N 228 DT OP3 P sing N N 229 DT OP3 HOP3 sing N N 230 DT P OP1 doub N N 231 DT P OP2 sing N N 232 DT P "O5'" sing N N 233 DT OP2 HOP2 sing N N 234 DT "O5'" "C5'" sing N N 235 DT "C5'" "C4'" sing N N 236 DT "C5'" "H5'" sing N N 237 DT "C5'" "H5''" sing N N 238 DT "C4'" "O4'" sing N N 239 DT "C4'" "C3'" sing N N 240 DT "C4'" "H4'" sing N N 241 DT "O4'" "C1'" sing N N 242 DT "C3'" "O3'" sing N N 243 DT "C3'" "C2'" sing N N 244 DT "C3'" "H3'" sing N N 245 DT "O3'" "HO3'" sing N N 246 DT "C2'" "C1'" sing N N 247 DT "C2'" "H2'" sing N N 248 DT "C2'" "H2''" sing N N 249 DT "C1'" N1 sing N N 250 DT "C1'" "H1'" sing N N 251 DT N1 C2 sing N N 252 DT N1 C6 sing N N 253 DT C2 O2 doub N N 254 DT C2 N3 sing N N 255 DT N3 C4 sing N N 256 DT N3 H3 sing N N 257 DT C4 O4 doub N N 258 DT C4 C5 sing N N 259 DT C5 C7 sing N N 260 DT C5 C6 doub N N 261 DT C7 H71 sing N N 262 DT C7 H72 sing N N 263 DT C7 H73 sing N N 264 DT C6 H6 sing N N 265 GLN N CA sing N N 266 GLN N H sing N N 267 GLN N H2 sing N N 268 GLN CA C sing N N 269 GLN CA CB sing N N 270 GLN CA HA sing N N 271 GLN C O doub N N 272 GLN C OXT sing N N 273 GLN CB CG sing N N 274 GLN CB HB2 sing N N 275 GLN CB HB3 sing N N 276 GLN CG CD sing N N 277 GLN CG HG2 sing N N 278 GLN CG HG3 sing N N 279 GLN CD OE1 doub N N 280 GLN CD NE2 sing N N 281 GLN NE2 HE21 sing N N 282 GLN NE2 HE22 sing N N 283 GLN OXT HXT sing N N 284 GLU N CA sing N N 285 GLU N H sing N N 286 GLU N H2 sing N N 287 GLU CA C sing N N 288 GLU CA CB sing N N 289 GLU CA HA sing N N 290 GLU C O doub N N 291 GLU C OXT sing N N 292 GLU CB CG sing N N 293 GLU CB HB2 sing N N 294 GLU CB HB3 sing N N 295 GLU CG CD sing N N 296 GLU CG HG2 sing N N 297 GLU CG HG3 sing N N 298 GLU CD OE1 doub N N 299 GLU CD OE2 sing N N 300 GLU OE2 HE2 sing N N 301 GLU OXT HXT sing N N 302 GLY N CA sing N N 303 GLY N H sing N N 304 GLY N H2 sing N N 305 GLY CA C sing N N 306 GLY CA HA2 sing N N 307 GLY CA HA3 sing N N 308 GLY C O doub N N 309 GLY C OXT sing N N 310 GLY OXT HXT sing N N 311 HIS N CA sing N N 312 HIS N H sing N N 313 HIS N H2 sing N N 314 HIS CA C sing N N 315 HIS CA CB sing N N 316 HIS CA HA sing N N 317 HIS C O doub N N 318 HIS C OXT sing N N 319 HIS CB CG sing N N 320 HIS CB HB2 sing N N 321 HIS CB HB3 sing N N 322 HIS CG ND1 sing Y N 323 HIS CG CD2 doub Y N 324 HIS ND1 CE1 doub Y N 325 HIS ND1 HD1 sing N N 326 HIS CD2 NE2 sing Y N 327 HIS CD2 HD2 sing N N 328 HIS CE1 NE2 sing Y N 329 HIS CE1 HE1 sing N N 330 HIS NE2 HE2 sing N N 331 HIS OXT HXT sing N N 332 HOH O H1 sing N N 333 HOH O H2 sing N N 334 ILE N CA sing N N 335 ILE N H sing N N 336 ILE N H2 sing N N 337 ILE CA C sing N N 338 ILE CA CB sing N N 339 ILE CA HA sing N N 340 ILE C O doub N N 341 ILE C OXT sing N N 342 ILE CB CG1 sing N N 343 ILE CB CG2 sing N N 344 ILE CB HB sing N N 345 ILE CG1 CD1 sing N N 346 ILE CG1 HG12 sing N N 347 ILE CG1 HG13 sing N N 348 ILE CG2 HG21 sing N N 349 ILE CG2 HG22 sing N N 350 ILE CG2 HG23 sing N N 351 ILE CD1 HD11 sing N N 352 ILE CD1 HD12 sing N N 353 ILE CD1 HD13 sing N N 354 ILE OXT HXT sing N N 355 LEU N CA sing N N 356 LEU N H sing N N 357 LEU N H2 sing N N 358 LEU CA C sing N N 359 LEU CA CB sing N N 360 LEU CA HA sing N N 361 LEU C O doub N N 362 LEU C OXT sing N N 363 LEU CB CG sing N N 364 LEU CB HB2 sing N N 365 LEU CB HB3 sing N N 366 LEU CG CD1 sing N N 367 LEU CG CD2 sing N N 368 LEU CG HG sing N N 369 LEU CD1 HD11 sing N N 370 LEU CD1 HD12 sing N N 371 LEU CD1 HD13 sing N N 372 LEU CD2 HD21 sing N N 373 LEU CD2 HD22 sing N N 374 LEU CD2 HD23 sing N N 375 LEU OXT HXT sing N N 376 LYS N CA sing N N 377 LYS N H sing N N 378 LYS N H2 sing N N 379 LYS CA C sing N N 380 LYS CA CB sing N N 381 LYS CA HA sing N N 382 LYS C O doub N N 383 LYS C OXT sing N N 384 LYS CB CG sing N N 385 LYS CB HB2 sing N N 386 LYS CB HB3 sing N N 387 LYS CG CD sing N N 388 LYS CG HG2 sing N N 389 LYS CG HG3 sing N N 390 LYS CD CE sing N N 391 LYS CD HD2 sing N N 392 LYS CD HD3 sing N N 393 LYS CE NZ sing N N 394 LYS CE HE2 sing N N 395 LYS CE HE3 sing N N 396 LYS NZ HZ1 sing N N 397 LYS NZ HZ2 sing N N 398 LYS NZ HZ3 sing N N 399 LYS OXT HXT sing N N 400 MET N CA sing N N 401 MET N H sing N N 402 MET N H2 sing N N 403 MET CA C sing N N 404 MET CA CB sing N N 405 MET CA HA sing N N 406 MET C O doub N N 407 MET C OXT sing N N 408 MET CB CG sing N N 409 MET CB HB2 sing N N 410 MET CB HB3 sing N N 411 MET CG SD sing N N 412 MET CG HG2 sing N N 413 MET CG HG3 sing N N 414 MET SD CE sing N N 415 MET CE HE1 sing N N 416 MET CE HE2 sing N N 417 MET CE HE3 sing N N 418 MET OXT HXT sing N N 419 PHE N CA sing N N 420 PHE N H sing N N 421 PHE N H2 sing N N 422 PHE CA C sing N N 423 PHE CA CB sing N N 424 PHE CA HA sing N N 425 PHE C O doub N N 426 PHE C OXT sing N N 427 PHE CB CG sing N N 428 PHE CB HB2 sing N N 429 PHE CB HB3 sing N N 430 PHE CG CD1 doub Y N 431 PHE CG CD2 sing Y N 432 PHE CD1 CE1 sing Y N 433 PHE CD1 HD1 sing N N 434 PHE CD2 CE2 doub Y N 435 PHE CD2 HD2 sing N N 436 PHE CE1 CZ doub Y N 437 PHE CE1 HE1 sing N N 438 PHE CE2 CZ sing Y N 439 PHE CE2 HE2 sing N N 440 PHE CZ HZ sing N N 441 PHE OXT HXT sing N N 442 PRO N CA sing N N 443 PRO N CD sing N N 444 PRO N H sing N N 445 PRO CA C sing N N 446 PRO CA CB sing N N 447 PRO CA HA sing N N 448 PRO C O doub N N 449 PRO C OXT sing N N 450 PRO CB CG sing N N 451 PRO CB HB2 sing N N 452 PRO CB HB3 sing N N 453 PRO CG CD sing N N 454 PRO CG HG2 sing N N 455 PRO CG HG3 sing N N 456 PRO CD HD2 sing N N 457 PRO CD HD3 sing N N 458 PRO OXT HXT sing N N 459 SER N CA sing N N 460 SER N H sing N N 461 SER N H2 sing N N 462 SER CA C sing N N 463 SER CA CB sing N N 464 SER CA HA sing N N 465 SER C O doub N N 466 SER C OXT sing N N 467 SER CB OG sing N N 468 SER CB HB2 sing N N 469 SER CB HB3 sing N N 470 SER OG HG sing N N 471 SER OXT HXT sing N N 472 THR N CA sing N N 473 THR N H sing N N 474 THR N H2 sing N N 475 THR CA C sing N N 476 THR CA CB sing N N 477 THR CA HA sing N N 478 THR C O doub N N 479 THR C OXT sing N N 480 THR CB OG1 sing N N 481 THR CB CG2 sing N N 482 THR CB HB sing N N 483 THR OG1 HG1 sing N N 484 THR CG2 HG21 sing N N 485 THR CG2 HG22 sing N N 486 THR CG2 HG23 sing N N 487 THR OXT HXT sing N N 488 TYR N CA sing N N 489 TYR N H sing N N 490 TYR N H2 sing N N 491 TYR CA C sing N N 492 TYR CA CB sing N N 493 TYR CA HA sing N N 494 TYR C O doub N N 495 TYR C OXT sing N N 496 TYR CB CG sing N N 497 TYR CB HB2 sing N N 498 TYR CB HB3 sing N N 499 TYR CG CD1 doub Y N 500 TYR CG CD2 sing Y N 501 TYR CD1 CE1 sing Y N 502 TYR CD1 HD1 sing N N 503 TYR CD2 CE2 doub Y N 504 TYR CD2 HD2 sing N N 505 TYR CE1 CZ doub Y N 506 TYR CE1 HE1 sing N N 507 TYR CE2 CZ sing Y N 508 TYR CE2 HE2 sing N N 509 TYR CZ OH sing N N 510 TYR OH HH sing N N 511 TYR OXT HXT sing N N 512 VAL N CA sing N N 513 VAL N H sing N N 514 VAL N H2 sing N N 515 VAL CA C sing N N 516 VAL CA CB sing N N 517 VAL CA HA sing N N 518 VAL C O doub N N 519 VAL C OXT sing N N 520 VAL CB CG1 sing N N 521 VAL CB CG2 sing N N 522 VAL CB HB sing N N 523 VAL CG1 HG11 sing N N 524 VAL CG1 HG12 sing N N 525 VAL CG1 HG13 sing N N 526 VAL CG2 HG21 sing N N 527 VAL CG2 HG22 sing N N 528 VAL CG2 HG23 sing N N 529 VAL OXT HXT sing N N 530 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2NLL 'double helix' 2NLL 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 17 1_555 0.021 -0.469 0.434 3.020 -11.256 -14.660 1 C_DA503:DT537_D C 503 ? D 537 ? 20 1 1 A DG 3 1_555 B DC 16 1_555 -0.567 -0.756 0.423 0.094 -11.859 -2.891 2 C_DG504:DC536_D C 504 ? D 536 ? 19 1 1 A DG 4 1_555 B DC 15 1_555 -0.796 -0.610 0.215 -3.372 -14.683 -3.936 3 C_DG505:DC535_D C 505 ? D 535 ? 19 1 1 A DT 5 1_555 B DA 14 1_555 -0.559 -0.340 0.585 -5.470 -6.245 3.646 4 C_DT506:DA534_D C 506 ? D 534 ? 20 1 1 A DC 6 1_555 B DG 13 1_555 1.159 -0.360 0.104 1.755 -3.568 -2.248 5 C_DC507:DG533_D C 507 ? D 533 ? 19 1 1 A DA 7 1_555 B DT 12 1_555 0.134 0.083 0.286 11.069 -16.785 -2.537 6 C_DA508:DT532_D C 508 ? D 532 ? 20 1 1 A DT 8 1_555 B DA 11 1_555 0.129 -0.342 0.164 3.689 -20.418 3.498 7 C_DT509:DA531_D C 509 ? D 531 ? 20 1 1 A DT 9 1_555 B DA 10 1_555 -0.435 -0.223 0.076 -3.505 -19.309 -6.198 8 C_DT510:DA530_D C 510 ? D 530 ? 20 1 1 A 5IU 10 1_555 B DA 9 1_555 0.181 -0.275 -0.106 -9.924 -13.391 0.467 9 C_5IU511:DA529_D C 511 ? D 529 ? 20 1 1 A DC 11 1_555 B DG 8 1_555 -0.038 -0.022 -0.042 -8.215 -1.683 -3.932 10 C_DC512:DG528_D C 512 ? D 528 ? 19 1 1 A DA 12 1_555 B DT 7 1_555 0.193 -0.073 0.123 -10.296 -9.196 -3.315 11 C_DA513:DT527_D C 513 ? D 527 ? 20 1 1 A DG 13 1_555 B DC 6 1_555 -0.151 0.016 -0.359 -2.140 -12.847 -1.422 12 C_DG514:DC526_D C 514 ? D 526 ? 19 1 1 A DG 14 1_555 B DC 5 1_555 0.092 -0.094 0.021 -6.458 -9.712 -0.617 13 C_DG515:DC525_D C 515 ? D 525 ? 19 1 1 A DT 15 1_555 B DA 4 1_555 -0.177 0.000 0.436 -9.147 -13.872 2.735 14 C_DT516:DA524_D C 516 ? D 524 ? 20 1 1 A DC 16 1_555 B DG 3 1_555 0.217 -0.159 -0.132 9.117 0.217 2.750 15 C_DC517:DG523_D C 517 ? D 523 ? 19 1 1 A DA 17 1_555 B DT 2 1_555 0.054 -0.295 0.580 12.835 -22.121 -1.343 16 C_DA518:DT522_D C 518 ? D 522 ? 20 1 1 A DG 18 1_555 B DC 1 1_555 0.456 -0.173 0.181 2.472 -19.903 -1.749 17 C_DG519:DC521_D C 519 ? D 521 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 17 1_555 A DG 3 1_555 B DC 16 1_555 1.726 -2.166 3.525 1.068 1.620 32.511 -4.164 -2.879 3.469 2.890 -1.906 32.567 1 CC_DA503DG504:DC536DT537_DD C 503 ? D 537 ? C 504 ? D 536 ? 1 A DG 3 1_555 B DC 16 1_555 A DG 4 1_555 B DC 15 1_555 0.432 -0.552 3.393 3.593 1.446 34.262 -1.166 -0.148 3.394 2.444 -6.076 34.474 2 CC_DG504DG505:DC535DC536_DD C 504 ? D 536 ? C 505 ? D 535 ? 1 A DG 4 1_555 B DC 15 1_555 A DT 5 1_555 B DA 14 1_555 0.256 -0.657 3.491 -3.189 -1.530 30.382 -0.922 -1.160 3.475 -2.906 6.059 30.582 3 CC_DG505DT506:DA534DC535_DD C 505 ? D 535 ? C 506 ? D 534 ? 1 A DT 5 1_555 B DA 14 1_555 A DC 6 1_555 B DG 13 1_555 0.892 0.732 3.300 7.346 1.402 46.288 0.800 -0.492 3.415 1.769 -9.274 46.855 4 CC_DT506DC507:DG533DA534_DD C 506 ? D 534 ? C 507 ? D 533 ? 1 A DC 6 1_555 B DG 13 1_555 A DA 7 1_555 B DT 12 1_555 -1.368 1.139 3.105 -2.932 -1.091 32.061 2.240 1.962 3.175 -1.969 5.293 32.209 5 CC_DC507DA508:DT532DG533_DD C 507 ? D 533 ? C 508 ? D 532 ? 1 A DA 7 1_555 B DT 12 1_555 A DT 8 1_555 B DA 11 1_555 0.398 -0.350 3.404 0.398 -5.157 36.184 0.188 -0.576 3.424 -8.250 -0.637 36.539 6 CC_DA508DT509:DA531DT532_DD C 508 ? D 532 ? C 509 ? D 531 ? 1 A DT 8 1_555 B DA 11 1_555 A DT 9 1_555 B DA 10 1_555 -0.202 0.059 3.407 0.129 3.519 35.818 -0.426 0.347 3.396 5.704 -0.208 35.985 7 CC_DT509DT510:DA530DA531_DD C 509 ? D 531 ? C 510 ? D 530 ? 1 A DT 9 1_555 B DA 10 1_555 A 5IU 10 1_555 B DA 9 1_555 -0.038 -0.290 3.499 0.531 0.688 35.700 -0.579 0.144 3.492 1.123 -0.865 35.711 8 CC_DT5105IU511:DA529DA530_DD C 510 ? D 530 ? C 511 ? D 529 ? 1 A 5IU 10 1_555 B DA 9 1_555 A DC 11 1_555 B DG 8 1_555 0.845 0.599 3.293 0.558 4.088 35.516 0.376 -1.294 3.351 6.673 -0.912 35.747 9 CC_5IU511DC512:DG528DA529_DD C 511 ? D 529 ? C 512 ? D 528 ? 1 A DC 11 1_555 B DG 8 1_555 A DA 12 1_555 B DT 7 1_555 -1.087 0.060 3.486 -5.753 0.779 35.720 -0.023 0.866 3.612 1.260 9.302 36.174 10 CC_DC512DA513:DT527DG528_DD C 512 ? D 528 ? C 513 ? D 527 ? 1 A DA 12 1_555 B DT 7 1_555 A DG 13 1_555 B DC 6 1_555 0.240 -0.210 3.275 4.890 9.766 32.957 -1.851 0.348 3.093 16.654 -8.340 34.672 11 CC_DA513DG514:DC526DT527_DD C 513 ? D 527 ? C 514 ? D 526 ? 1 A DG 13 1_555 B DC 6 1_555 A DG 14 1_555 B DC 5 1_555 -0.467 -0.648 3.318 -5.876 3.715 34.683 -1.624 -0.112 3.267 6.155 9.736 35.352 12 CC_DG514DG515:DC525DC526_DD C 514 ? D 526 ? C 515 ? D 525 ? 1 A DG 14 1_555 B DC 5 1_555 A DT 15 1_555 B DA 4 1_555 -0.494 -0.860 3.442 -3.246 -1.363 28.789 -1.396 0.223 3.511 -2.728 6.498 28.999 13 CC_DG515DT516:DA524DC525_DD C 515 ? D 525 ? C 516 ? D 524 ? 1 A DT 15 1_555 B DA 4 1_555 A DC 16 1_555 B DG 3 1_555 0.957 1.723 3.033 6.790 2.749 38.223 2.264 -0.637 3.261 4.152 -10.254 38.892 14 CC_DT516DC517:DG523DA524_DD C 516 ? D 524 ? C 517 ? D 523 ? 1 A DC 16 1_555 B DG 3 1_555 A DA 17 1_555 B DT 2 1_555 -1.107 1.594 3.305 -6.523 1.350 36.537 2.314 0.826 3.499 2.131 10.298 37.119 15 CC_DC517DA518:DT522DG523_DD C 517 ? D 523 ? C 518 ? D 522 ? 1 A DA 17 1_555 B DT 2 1_555 A DG 18 1_555 B DC 1 1_555 0.327 0.168 3.711 4.837 1.409 36.247 0.047 0.239 3.726 2.251 -7.728 36.584 16 CC_DA518DG519:DC521DT522_DD C 518 ? D 522 ? C 519 ? D 521 ? # _atom_sites.entry_id 2NLL _atom_sites.fract_transf_matrix[1][1] 0.024450 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015244 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007955 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O P S ZN # loop_