data_2P5S # _entry.id 2P5S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2P5S pdb_00002p5s 10.2210/pdb2p5s/pdb RCSB RCSB042001 ? ? WWPDB D_1000042001 ? ? # _pdbx_database_status.entry_id 2P5S _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-03-16 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhu, H.' 1 'Wang, J.' 2 'Shen, Y.' 3 'Tempel, W.' 4 'Landry, R.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Sundstrom, M.' 8 'Weigelt, J.' 9 'Bochkarev, A.' 10 'Park, H.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'RAB domain of human RASEF in complex with GDP' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, H.' 1 ? primary 'Wang, J.' 2 ? primary 'Shen, Y.' 3 ? primary 'Tempel, W.' 4 ? primary 'Landry, R.' 5 ? primary 'Arrowsmith, C.H.' 6 ? primary 'Edwards, A.M.' 7 ? primary 'Sundstrom, M.' 8 ? primary 'Weigelt, J.' 9 ? primary 'Bochkarev, A.' 10 ? primary 'Park, H.' 11 ? # _cell.entry_id 2P5S _cell.length_a 71.275 _cell.length_b 42.524 _cell.length_c 75.656 _cell.angle_alpha 90.00 _cell.angle_beta 98.91 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2P5S _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RAS and EF-hand domain containing' 22065.264 2 ? ? 'residues 533-712' ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 3 ? ? ? ? 4 water nat water 18.015 38 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSAKSFSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQ LWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDTAATEGQKCVPGH FGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKRT ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSAKSFSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQ LWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDTAATEGQKCVPGH FGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKRT ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 ALA n 1 21 LYS n 1 22 SER n 1 23 PHE n 1 24 SER n 1 25 SER n 1 26 GLN n 1 27 LYS n 1 28 ALA n 1 29 TYR n 1 30 LYS n 1 31 ILE n 1 32 VAL n 1 33 LEU n 1 34 ALA n 1 35 GLY n 1 36 ASP n 1 37 ALA n 1 38 ALA n 1 39 VAL n 1 40 GLY n 1 41 LYS n 1 42 SER n 1 43 SER n 1 44 PHE n 1 45 LEU n 1 46 MET n 1 47 ARG n 1 48 LEU n 1 49 CYS n 1 50 LYS n 1 51 ASN n 1 52 GLU n 1 53 PHE n 1 54 ARG n 1 55 GLU n 1 56 ASN n 1 57 ILE n 1 58 SER n 1 59 ALA n 1 60 THR n 1 61 LEU n 1 62 GLY n 1 63 VAL n 1 64 ASP n 1 65 PHE n 1 66 GLN n 1 67 MET n 1 68 LYS n 1 69 THR n 1 70 LEU n 1 71 ILE n 1 72 VAL n 1 73 ASP n 1 74 GLY n 1 75 GLU n 1 76 ARG n 1 77 THR n 1 78 VAL n 1 79 LEU n 1 80 GLN n 1 81 LEU n 1 82 TRP n 1 83 ASP n 1 84 THR n 1 85 ALA n 1 86 GLY n 1 87 GLN n 1 88 GLU n 1 89 ARG n 1 90 PHE n 1 91 ARG n 1 92 SER n 1 93 ILE n 1 94 ALA n 1 95 LYS n 1 96 SER n 1 97 TYR n 1 98 PHE n 1 99 ARG n 1 100 LYS n 1 101 ALA n 1 102 ASP n 1 103 GLY n 1 104 VAL n 1 105 LEU n 1 106 LEU n 1 107 LEU n 1 108 TYR n 1 109 ASP n 1 110 VAL n 1 111 THR n 1 112 CYS n 1 113 GLU n 1 114 LYS n 1 115 SER n 1 116 PHE n 1 117 LEU n 1 118 ASN n 1 119 ILE n 1 120 ARG n 1 121 GLU n 1 122 TRP n 1 123 VAL n 1 124 ASP n 1 125 MET n 1 126 ILE n 1 127 GLU n 1 128 ASP n 1 129 ALA n 1 130 ALA n 1 131 HIS n 1 132 GLU n 1 133 THR n 1 134 VAL n 1 135 PRO n 1 136 ILE n 1 137 MET n 1 138 LEU n 1 139 VAL n 1 140 GLY n 1 141 ASN n 1 142 LYS n 1 143 ALA n 1 144 ASP n 1 145 ILE n 1 146 ARG n 1 147 ASP n 1 148 THR n 1 149 ALA n 1 150 ALA n 1 151 THR n 1 152 GLU n 1 153 GLY n 1 154 GLN n 1 155 LYS n 1 156 CYS n 1 157 VAL n 1 158 PRO n 1 159 GLY n 1 160 HIS n 1 161 PHE n 1 162 GLY n 1 163 GLU n 1 164 LYS n 1 165 LEU n 1 166 ALA n 1 167 MET n 1 168 THR n 1 169 TYR n 1 170 GLY n 1 171 ALA n 1 172 LEU n 1 173 PHE n 1 174 CYS n 1 175 GLU n 1 176 THR n 1 177 SER n 1 178 ALA n 1 179 LYS n 1 180 ASP n 1 181 GLY n 1 182 SER n 1 183 ASN n 1 184 ILE n 1 185 VAL n 1 186 GLU n 1 187 ALA n 1 188 VAL n 1 189 LEU n 1 190 HIS n 1 191 LEU n 1 192 ALA n 1 193 ARG n 1 194 GLU n 1 195 VAL n 1 196 LYS n 1 197 LYS n 1 198 ARG n 1 199 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RASEF _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) codon(+) RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a-LIC-Thrombin _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8IZ41_HUMAN _struct_ref.pdbx_db_accession Q8IZ41 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AKSFSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQERFRSIAKSYFR KADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAK DGSNIVEAVLHLAREVKKRT ; _struct_ref.pdbx_align_begin 533 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2P5S A 20 ? 199 ? Q8IZ41 533 ? 712 ? 533 712 2 1 2P5S B 20 ? 199 ? Q8IZ41 533 ? 712 ? 533 712 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2P5S MET A 1 ? UNP Q8IZ41 ? ? 'cloning artifact' 514 1 1 2P5S GLY A 2 ? UNP Q8IZ41 ? ? 'cloning artifact' 515 2 1 2P5S SER A 3 ? UNP Q8IZ41 ? ? 'cloning artifact' 516 3 1 2P5S SER A 4 ? UNP Q8IZ41 ? ? 'cloning artifact' 517 4 1 2P5S HIS A 5 ? UNP Q8IZ41 ? ? 'cloning artifact' 518 5 1 2P5S HIS A 6 ? UNP Q8IZ41 ? ? 'cloning artifact' 519 6 1 2P5S HIS A 7 ? UNP Q8IZ41 ? ? 'cloning artifact' 520 7 1 2P5S HIS A 8 ? UNP Q8IZ41 ? ? 'cloning artifact' 521 8 1 2P5S HIS A 9 ? UNP Q8IZ41 ? ? 'cloning artifact' 522 9 1 2P5S HIS A 10 ? UNP Q8IZ41 ? ? 'cloning artifact' 523 10 1 2P5S SER A 11 ? UNP Q8IZ41 ? ? 'cloning artifact' 524 11 1 2P5S SER A 12 ? UNP Q8IZ41 ? ? 'cloning artifact' 525 12 1 2P5S GLY A 13 ? UNP Q8IZ41 ? ? 'cloning artifact' 526 13 1 2P5S LEU A 14 ? UNP Q8IZ41 ? ? 'cloning artifact' 527 14 1 2P5S VAL A 15 ? UNP Q8IZ41 ? ? 'cloning artifact' 528 15 1 2P5S PRO A 16 ? UNP Q8IZ41 ? ? 'cloning artifact' 529 16 1 2P5S ARG A 17 ? UNP Q8IZ41 ? ? 'cloning artifact' 530 17 1 2P5S GLY A 18 ? UNP Q8IZ41 ? ? 'cloning artifact' 531 18 1 2P5S SER A 19 ? UNP Q8IZ41 ? ? 'cloning artifact' 532 19 2 2P5S MET B 1 ? UNP Q8IZ41 ? ? 'cloning artifact' 514 20 2 2P5S GLY B 2 ? UNP Q8IZ41 ? ? 'cloning artifact' 515 21 2 2P5S SER B 3 ? UNP Q8IZ41 ? ? 'cloning artifact' 516 22 2 2P5S SER B 4 ? UNP Q8IZ41 ? ? 'cloning artifact' 517 23 2 2P5S HIS B 5 ? UNP Q8IZ41 ? ? 'cloning artifact' 518 24 2 2P5S HIS B 6 ? UNP Q8IZ41 ? ? 'cloning artifact' 519 25 2 2P5S HIS B 7 ? UNP Q8IZ41 ? ? 'cloning artifact' 520 26 2 2P5S HIS B 8 ? UNP Q8IZ41 ? ? 'cloning artifact' 521 27 2 2P5S HIS B 9 ? UNP Q8IZ41 ? ? 'cloning artifact' 522 28 2 2P5S HIS B 10 ? UNP Q8IZ41 ? ? 'cloning artifact' 523 29 2 2P5S SER B 11 ? UNP Q8IZ41 ? ? 'cloning artifact' 524 30 2 2P5S SER B 12 ? UNP Q8IZ41 ? ? 'cloning artifact' 525 31 2 2P5S GLY B 13 ? UNP Q8IZ41 ? ? 'cloning artifact' 526 32 2 2P5S LEU B 14 ? UNP Q8IZ41 ? ? 'cloning artifact' 527 33 2 2P5S VAL B 15 ? UNP Q8IZ41 ? ? 'cloning artifact' 528 34 2 2P5S PRO B 16 ? UNP Q8IZ41 ? ? 'cloning artifact' 529 35 2 2P5S ARG B 17 ? UNP Q8IZ41 ? ? 'cloning artifact' 530 36 2 2P5S GLY B 18 ? UNP Q8IZ41 ? ? 'cloning artifact' 531 37 2 2P5S SER B 19 ? UNP Q8IZ41 ? ? 'cloning artifact' 532 38 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2P5S # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 52.07 _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.pdbx_details '20% PEG-3350, 0.2M KF, vapor diffusion, sitting drop' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.pdbx_collection_date 2006-11-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_wavelength 1.0000 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID # _reflns.entry_id 2P5S _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 50.000 _reflns.number_obs 29262 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_netI_over_sigmaI 8.100 _reflns.pdbx_chi_squared 1.070 _reflns.pdbx_redundancy 3.400 _reflns.percent_possible_obs 94.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.00 2.07 ? ? 2125 0.751 ? ? 0.947 1.90 69.50 ? ? ? 1 2.07 2.15 ? ? 2594 0.611 ? ? 0.939 2.40 85.30 ? ? ? 2 2.15 2.25 ? ? 2928 0.487 ? ? 1.083 2.90 95.70 ? ? ? 3 2.25 2.37 ? ? 3040 0.424 ? ? 1.038 3.50 98.90 ? ? ? 4 2.37 2.52 ? ? 3049 0.301 ? ? 0.945 3.70 100.00 ? ? ? 5 2.52 2.71 ? ? 3068 0.221 ? ? 0.978 3.70 100.00 ? ? ? 6 2.71 2.99 ? ? 3077 0.122 ? ? 0.945 3.70 100.00 ? ? ? 7 2.99 3.42 ? ? 3074 0.070 ? ? 1.181 3.70 99.90 ? ? ? 8 3.42 4.31 ? ? 3106 0.039 ? ? 1.167 3.70 100.00 ? ? ? 9 4.31 50.00 ? ? 3201 0.032 ? ? 1.315 3.60 99.80 ? ? ? 10 # _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. arp/warp, molprobity, coot were also used for the refinement' _refine.B_iso_mean 27.035 _refine.aniso_B[1][1] -0.075 _refine.aniso_B[2][2] 0.951 _refine.aniso_B[3][3] -0.816 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.194 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_d_res_high 2.150 _refine.ls_d_res_low 20.000 _refine.ls_number_reflns_R_free 1377 _refine.ls_number_reflns_obs 24513 _refine.ls_R_factor_R_work 0.2111 _refine.ls_R_factor_R_free 0.2602 _refine.ls_R_factor_all 0.214 _refine.ls_wR_factor_R_work 0.195 _refine.ls_wR_factor_R_free 0.238 _refine.ls_percent_reflns_obs 99.106 _refine.ls_percent_reflns_R_free 5.617 _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.919 _refine.pdbx_overall_ESU_R 0.204 _refine.pdbx_overall_ESU_R_Free 0.189 _refine.overall_SU_ML 0.142 _refine.overall_SU_B 5.428 _refine.entry_id 2P5S _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdb entry 1g16' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details 'thin shells' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2430 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 2527 _refine_hist.d_res_high 2.150 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2524 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1679 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3409 1.423 1.987 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 4091 0.924 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 312 6.801 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 101 35.547 24.059 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 438 14.017 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14 13.877 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 392 0.079 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2746 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 516 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 427 0.211 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1641 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1182 0.173 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1254 0.084 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 77 0.121 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 4 0.120 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 18 0.247 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 2 0.147 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1759 2.911 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 653 0.647 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2489 3.723 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1082 2.447 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 920 3.354 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 20 2.205 2.150 1775 94.310 1486 0.277 0.283 188 0.333 . . . . 'X-RAY DIFFRACTION' 20 2.265 2.205 1750 96.743 1693 0.281 0.281 0 . . . . . 'X-RAY DIFFRACTION' 20 2.330 2.265 1711 98.422 1500 0.276 0.282 184 0.322 . . . . 'X-RAY DIFFRACTION' 20 2.400 2.330 1641 99.695 1636 0.245 0.245 0 . . . . . 'X-RAY DIFFRACTION' 20 2.478 2.400 1625 99.692 1468 0.244 0.250 152 0.303 . . . . 'X-RAY DIFFRACTION' 20 2.563 2.478 1542 99.611 1536 0.257 0.257 0 . . . . . 'X-RAY DIFFRACTION' 20 2.658 2.563 1528 100.000 1388 0.223 0.228 140 0.283 . . . . 'X-RAY DIFFRACTION' 20 2.765 2.658 1425 99.930 1326 0.222 0.226 98 0.277 . . . . 'X-RAY DIFFRACTION' 20 2.885 2.765 1385 99.856 1378 0.222 0.222 5 0.395 . . . . 'X-RAY DIFFRACTION' 20 3.023 2.885 1350 99.926 1238 0.220 0.227 111 0.308 . . . . 'X-RAY DIFFRACTION' 20 3.183 3.023 1275 99.451 1168 0.212 0.215 100 0.249 . . . . 'X-RAY DIFFRACTION' 20 3.370 3.183 1201 100.000 1201 0.201 0.201 0 . . . . . 'X-RAY DIFFRACTION' 20 3.596 3.370 1152 99.913 1078 0.199 0.202 73 0.250 . . . . 'X-RAY DIFFRACTION' 20 3.873 3.596 1052 99.905 975 0.188 0.192 76 0.249 . . . . 'X-RAY DIFFRACTION' 20 4.227 3.873 994 99.799 933 0.178 0.182 59 0.263 . . . . 'X-RAY DIFFRACTION' 20 4.700 4.227 890 99.663 840 0.164 0.162 47 0.134 . . . . 'X-RAY DIFFRACTION' 20 5.378 4.700 812 100.000 760 0.174 0.179 52 0.265 . . . . 'X-RAY DIFFRACTION' 20 6.471 5.378 682 100.000 652 0.229 0.229 30 0.242 . . . . 'X-RAY DIFFRACTION' 20 8.707 6.471 576 100.000 536 0.206 0.208 40 0.224 . . . . 'X-RAY DIFFRACTION' 20 20.000 8.707 368 99.457 344 0.219 0.220 22 0.240 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 2P5S _struct.title 'RAB domain of human RASEF in complex with GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'G-PROTEIN, RAB, GDP, STRUCTURAL GENOMICS, SGC, Structural Genomics Consortium, SIGNALING PROTEIN' _struct_keywords.entry_id 2P5S _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details 'not known' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 40 ? ASN A 51 ? GLY A 553 ASN A 564 1 ? 12 HELX_P HELX_P2 2 PHE A 90 ? ALA A 101 ? PHE A 603 ALA A 614 1 ? 12 HELX_P HELX_P3 3 CYS A 112 ? ASN A 118 ? CYS A 625 ASN A 631 1 ? 7 HELX_P HELX_P4 4 ASN A 118 ? ALA A 130 ? ASN A 631 ALA A 643 1 ? 13 HELX_P HELX_P5 5 LYS A 142 ? ASP A 144 ? LYS A 655 ASP A 657 5 ? 3 HELX_P HELX_P6 6 ILE A 145 ? GLU A 152 ? ILE A 658 GLU A 665 1 ? 8 HELX_P HELX_P7 7 PRO A 158 ? GLY A 170 ? PRO A 671 GLY A 683 1 ? 13 HELX_P HELX_P8 8 ASN A 183 ? LYS A 196 ? ASN A 696 LYS A 709 1 ? 14 HELX_P HELX_P9 9 GLY B 40 ? ASN B 51 ? GLY B 553 ASN B 564 1 ? 12 HELX_P HELX_P10 10 PHE B 90 ? ALA B 101 ? PHE B 603 ALA B 614 1 ? 12 HELX_P HELX_P11 11 CYS B 112 ? ASN B 118 ? CYS B 625 ASN B 631 1 ? 7 HELX_P HELX_P12 12 ASN B 118 ? ALA B 130 ? ASN B 631 ALA B 643 1 ? 13 HELX_P HELX_P13 13 LYS B 142 ? ASP B 144 ? LYS B 655 ASP B 657 5 ? 3 HELX_P HELX_P14 14 ILE B 145 ? GLU B 152 ? ILE B 658 GLU B 665 1 ? 8 HELX_P HELX_P15 15 PRO B 158 ? GLY B 170 ? PRO B 671 GLY B 683 1 ? 13 HELX_P HELX_P16 16 ASN B 183 ? LYS B 197 ? ASN B 696 LYS B 710 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 66 ? VAL A 72 ? GLN A 579 VAL A 585 A 2 GLU A 75 ? ASP A 83 ? GLU A 588 ASP A 596 A 3 TYR A 29 ? ALA A 34 ? TYR A 542 ALA A 547 A 4 GLY A 103 ? ASP A 109 ? GLY A 616 ASP A 622 A 5 ILE A 136 ? ASN A 141 ? ILE A 649 ASN A 654 A 6 LEU A 172 ? GLU A 175 ? LEU A 685 GLU A 688 B 1 PHE B 65 ? VAL B 72 ? PHE B 578 VAL B 585 B 2 GLU B 75 ? ASP B 83 ? GLU B 588 ASP B 596 B 3 TYR B 29 ? ALA B 34 ? TYR B 542 ALA B 547 B 4 GLY B 103 ? ASP B 109 ? GLY B 616 ASP B 622 B 5 ILE B 136 ? ASN B 141 ? ILE B 649 ASN B 654 B 6 LEU B 172 ? GLU B 175 ? LEU B 685 GLU B 688 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 70 ? N LEU A 583 O THR A 77 ? O THR A 590 A 2 3 O GLN A 80 ? O GLN A 593 N TYR A 29 ? N TYR A 542 A 3 4 N VAL A 32 ? N VAL A 545 O LEU A 105 ? O LEU A 618 A 4 5 N LEU A 106 ? N LEU A 619 O VAL A 139 ? O VAL A 652 A 5 6 N LEU A 138 ? N LEU A 651 O LEU A 172 ? O LEU A 685 B 1 2 N LYS B 68 ? N LYS B 581 O LEU B 79 ? O LEU B 592 B 2 3 O GLN B 80 ? O GLN B 593 N TYR B 29 ? N TYR B 542 B 3 4 N ALA B 34 ? N ALA B 547 O LEU B 107 ? O LEU B 620 B 4 5 N TYR B 108 ? N TYR B 621 O ASN B 141 ? O ASN B 654 B 5 6 N LEU B 138 ? N LEU B 651 O LEU B 172 ? O LEU B 685 # _atom_sites.entry_id 2P5S _atom_sites.fract_transf_matrix[1][1] 0.014030 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002200 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023516 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013379 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 514 ? ? ? A . n A 1 2 GLY 2 515 ? ? ? A . n A 1 3 SER 3 516 ? ? ? A . n A 1 4 SER 4 517 ? ? ? A . n A 1 5 HIS 5 518 ? ? ? A . n A 1 6 HIS 6 519 ? ? ? A . n A 1 7 HIS 7 520 ? ? ? A . n A 1 8 HIS 8 521 ? ? ? A . n A 1 9 HIS 9 522 ? ? ? A . n A 1 10 HIS 10 523 ? ? ? A . n A 1 11 SER 11 524 ? ? ? A . n A 1 12 SER 12 525 ? ? ? A . n A 1 13 GLY 13 526 ? ? ? A . n A 1 14 LEU 14 527 ? ? ? A . n A 1 15 VAL 15 528 ? ? ? A . n A 1 16 PRO 16 529 ? ? ? A . n A 1 17 ARG 17 530 ? ? ? A . n A 1 18 GLY 18 531 ? ? ? A . n A 1 19 SER 19 532 ? ? ? A . n A 1 20 ALA 20 533 ? ? ? A . n A 1 21 LYS 21 534 ? ? ? A . n A 1 22 SER 22 535 ? ? ? A . n A 1 23 PHE 23 536 ? ? ? A . n A 1 24 SER 24 537 ? ? ? A . n A 1 25 SER 25 538 ? ? ? A . n A 1 26 GLN 26 539 ? ? ? A . n A 1 27 LYS 27 540 ? ? ? A . n A 1 28 ALA 28 541 541 ALA ALA A . n A 1 29 TYR 29 542 542 TYR TYR A . n A 1 30 LYS 30 543 543 LYS LYS A . n A 1 31 ILE 31 544 544 ILE ILE A . n A 1 32 VAL 32 545 545 VAL VAL A . n A 1 33 LEU 33 546 546 LEU LEU A . n A 1 34 ALA 34 547 547 ALA ALA A . n A 1 35 GLY 35 548 548 GLY GLY A . n A 1 36 ASP 36 549 549 ASP ASP A . n A 1 37 ALA 37 550 550 ALA ALA A . n A 1 38 ALA 38 551 551 ALA ALA A . n A 1 39 VAL 39 552 552 VAL VAL A . n A 1 40 GLY 40 553 553 GLY GLY A . n A 1 41 LYS 41 554 554 LYS LYS A . n A 1 42 SER 42 555 555 SER SER A . n A 1 43 SER 43 556 556 SER SER A . n A 1 44 PHE 44 557 557 PHE PHE A . n A 1 45 LEU 45 558 558 LEU LEU A . n A 1 46 MET 46 559 559 MET MET A . n A 1 47 ARG 47 560 560 ARG ARG A . n A 1 48 LEU 48 561 561 LEU LEU A . n A 1 49 CYS 49 562 562 CYS CYS A . n A 1 50 LYS 50 563 563 LYS LYS A . n A 1 51 ASN 51 564 564 ASN ASN A . n A 1 52 GLU 52 565 565 GLU GLU A . n A 1 53 PHE 53 566 566 PHE PHE A . n A 1 54 ARG 54 567 567 ARG ARG A . n A 1 55 GLU 55 568 ? ? ? A . n A 1 56 ASN 56 569 ? ? ? A . n A 1 57 ILE 57 570 ? ? ? A . n A 1 58 SER 58 571 ? ? ? A . n A 1 59 ALA 59 572 ? ? ? A . n A 1 60 THR 60 573 ? ? ? A . n A 1 61 LEU 61 574 ? ? ? A . n A 1 62 GLY 62 575 ? ? ? A . n A 1 63 VAL 63 576 ? ? ? A . n A 1 64 ASP 64 577 ? ? ? A . n A 1 65 PHE 65 578 578 PHE PHE A . n A 1 66 GLN 66 579 579 GLN GLN A . n A 1 67 MET 67 580 580 MET MET A . n A 1 68 LYS 68 581 581 LYS LYS A . n A 1 69 THR 69 582 582 THR THR A . n A 1 70 LEU 70 583 583 LEU LEU A . n A 1 71 ILE 71 584 584 ILE ILE A . n A 1 72 VAL 72 585 585 VAL VAL A . n A 1 73 ASP 73 586 586 ASP ASP A . n A 1 74 GLY 74 587 587 GLY GLY A . n A 1 75 GLU 75 588 588 GLU GLU A . n A 1 76 ARG 76 589 589 ARG ARG A . n A 1 77 THR 77 590 590 THR THR A . n A 1 78 VAL 78 591 591 VAL VAL A . n A 1 79 LEU 79 592 592 LEU LEU A . n A 1 80 GLN 80 593 593 GLN GLN A . n A 1 81 LEU 81 594 594 LEU LEU A . n A 1 82 TRP 82 595 595 TRP TRP A . n A 1 83 ASP 83 596 596 ASP ASP A . n A 1 84 THR 84 597 597 THR THR A . n A 1 85 ALA 85 598 598 ALA ALA A . n A 1 86 GLY 86 599 599 GLY GLY A . n A 1 87 GLN 87 600 600 GLN GLN A . n A 1 88 GLU 88 601 601 GLU GLU A . n A 1 89 ARG 89 602 602 ARG ARG A . n A 1 90 PHE 90 603 603 PHE PHE A . n A 1 91 ARG 91 604 604 ARG ARG A . n A 1 92 SER 92 605 605 SER SER A . n A 1 93 ILE 93 606 606 ILE ILE A . n A 1 94 ALA 94 607 607 ALA ALA A . n A 1 95 LYS 95 608 608 LYS LYS A . n A 1 96 SER 96 609 609 SER SER A . n A 1 97 TYR 97 610 610 TYR TYR A . n A 1 98 PHE 98 611 611 PHE PHE A . n A 1 99 ARG 99 612 612 ARG ARG A . n A 1 100 LYS 100 613 613 LYS LYS A . n A 1 101 ALA 101 614 614 ALA ALA A . n A 1 102 ASP 102 615 615 ASP ASP A . n A 1 103 GLY 103 616 616 GLY GLY A . n A 1 104 VAL 104 617 617 VAL VAL A . n A 1 105 LEU 105 618 618 LEU LEU A . n A 1 106 LEU 106 619 619 LEU LEU A . n A 1 107 LEU 107 620 620 LEU LEU A . n A 1 108 TYR 108 621 621 TYR TYR A . n A 1 109 ASP 109 622 622 ASP ASP A . n A 1 110 VAL 110 623 623 VAL VAL A . n A 1 111 THR 111 624 624 THR THR A . n A 1 112 CYS 112 625 625 CYS CYS A . n A 1 113 GLU 113 626 626 GLU GLU A . n A 1 114 LYS 114 627 627 LYS LYS A . n A 1 115 SER 115 628 628 SER SER A . n A 1 116 PHE 116 629 629 PHE PHE A . n A 1 117 LEU 117 630 630 LEU LEU A . n A 1 118 ASN 118 631 631 ASN ASN A . n A 1 119 ILE 119 632 632 ILE ILE A . n A 1 120 ARG 120 633 633 ARG ARG A . n A 1 121 GLU 121 634 634 GLU GLU A . n A 1 122 TRP 122 635 635 TRP TRP A . n A 1 123 VAL 123 636 636 VAL VAL A . n A 1 124 ASP 124 637 637 ASP ASP A . n A 1 125 MET 125 638 638 MET MET A . n A 1 126 ILE 126 639 639 ILE ILE A . n A 1 127 GLU 127 640 640 GLU GLU A . n A 1 128 ASP 128 641 641 ASP ASP A . n A 1 129 ALA 129 642 642 ALA ALA A . n A 1 130 ALA 130 643 643 ALA ALA A . n A 1 131 HIS 131 644 ? ? ? A . n A 1 132 GLU 132 645 ? ? ? A . n A 1 133 THR 133 646 ? ? ? A . n A 1 134 VAL 134 647 647 VAL VAL A . n A 1 135 PRO 135 648 648 PRO PRO A . n A 1 136 ILE 136 649 649 ILE ILE A . n A 1 137 MET 137 650 650 MET MET A . n A 1 138 LEU 138 651 651 LEU LEU A . n A 1 139 VAL 139 652 652 VAL VAL A . n A 1 140 GLY 140 653 653 GLY GLY A . n A 1 141 ASN 141 654 654 ASN ASN A . n A 1 142 LYS 142 655 655 LYS LYS A . n A 1 143 ALA 143 656 656 ALA ALA A . n A 1 144 ASP 144 657 657 ASP ASP A . n A 1 145 ILE 145 658 658 ILE ILE A . n A 1 146 ARG 146 659 659 ARG ARG A . n A 1 147 ASP 147 660 660 ASP ASP A . n A 1 148 THR 148 661 661 THR THR A . n A 1 149 ALA 149 662 662 ALA ALA A . n A 1 150 ALA 150 663 663 ALA ALA A . n A 1 151 THR 151 664 664 THR THR A . n A 1 152 GLU 152 665 665 GLU GLU A . n A 1 153 GLY 153 666 666 GLY GLY A . n A 1 154 GLN 154 667 667 GLN GLN A . n A 1 155 LYS 155 668 668 LYS LYS A . n A 1 156 CYS 156 669 669 CYS CYS A . n A 1 157 VAL 157 670 670 VAL VAL A . n A 1 158 PRO 158 671 671 PRO PRO A . n A 1 159 GLY 159 672 672 GLY GLY A . n A 1 160 HIS 160 673 673 HIS HIS A . n A 1 161 PHE 161 674 674 PHE PHE A . n A 1 162 GLY 162 675 675 GLY GLY A . n A 1 163 GLU 163 676 676 GLU GLU A . n A 1 164 LYS 164 677 677 LYS LYS A . n A 1 165 LEU 165 678 678 LEU LEU A . n A 1 166 ALA 166 679 679 ALA ALA A . n A 1 167 MET 167 680 680 MET MET A . n A 1 168 THR 168 681 681 THR THR A . n A 1 169 TYR 169 682 682 TYR TYR A . n A 1 170 GLY 170 683 683 GLY GLY A . n A 1 171 ALA 171 684 684 ALA ALA A . n A 1 172 LEU 172 685 685 LEU LEU A . n A 1 173 PHE 173 686 686 PHE PHE A . n A 1 174 CYS 174 687 687 CYS CYS A . n A 1 175 GLU 175 688 688 GLU GLU A . n A 1 176 THR 176 689 689 THR THR A . n A 1 177 SER 177 690 690 SER SER A . n A 1 178 ALA 178 691 691 ALA ALA A . n A 1 179 LYS 179 692 692 LYS LYS A . n A 1 180 ASP 180 693 693 ASP ASP A . n A 1 181 GLY 181 694 694 GLY GLY A . n A 1 182 SER 182 695 695 SER SER A . n A 1 183 ASN 183 696 696 ASN ASN A . n A 1 184 ILE 184 697 697 ILE ILE A . n A 1 185 VAL 185 698 698 VAL VAL A . n A 1 186 GLU 186 699 699 GLU GLU A . n A 1 187 ALA 187 700 700 ALA ALA A . n A 1 188 VAL 188 701 701 VAL VAL A . n A 1 189 LEU 189 702 702 LEU LEU A . n A 1 190 HIS 190 703 703 HIS HIS A . n A 1 191 LEU 191 704 704 LEU LEU A . n A 1 192 ALA 192 705 705 ALA ALA A . n A 1 193 ARG 193 706 706 ARG ARG A . n A 1 194 GLU 194 707 707 GLU GLU A . n A 1 195 VAL 195 708 708 VAL VAL A . n A 1 196 LYS 196 709 709 LYS LYS A . n A 1 197 LYS 197 710 710 LYS LYS A . n A 1 198 ARG 198 711 ? ? ? A . n A 1 199 THR 199 712 ? ? ? A . n B 1 1 MET 1 514 ? ? ? B . n B 1 2 GLY 2 515 ? ? ? B . n B 1 3 SER 3 516 ? ? ? B . n B 1 4 SER 4 517 ? ? ? B . n B 1 5 HIS 5 518 ? ? ? B . n B 1 6 HIS 6 519 ? ? ? B . n B 1 7 HIS 7 520 ? ? ? B . n B 1 8 HIS 8 521 ? ? ? B . n B 1 9 HIS 9 522 ? ? ? B . n B 1 10 HIS 10 523 ? ? ? B . n B 1 11 SER 11 524 ? ? ? B . n B 1 12 SER 12 525 ? ? ? B . n B 1 13 GLY 13 526 ? ? ? B . n B 1 14 LEU 14 527 ? ? ? B . n B 1 15 VAL 15 528 ? ? ? B . n B 1 16 PRO 16 529 ? ? ? B . n B 1 17 ARG 17 530 ? ? ? B . n B 1 18 GLY 18 531 ? ? ? B . n B 1 19 SER 19 532 ? ? ? B . n B 1 20 ALA 20 533 ? ? ? B . n B 1 21 LYS 21 534 ? ? ? B . n B 1 22 SER 22 535 ? ? ? B . n B 1 23 PHE 23 536 ? ? ? B . n B 1 24 SER 24 537 ? ? ? B . n B 1 25 SER 25 538 ? ? ? B . n B 1 26 GLN 26 539 ? ? ? B . n B 1 27 LYS 27 540 ? ? ? B . n B 1 28 ALA 28 541 541 ALA ALA B . n B 1 29 TYR 29 542 542 TYR TYR B . n B 1 30 LYS 30 543 543 LYS LYS B . n B 1 31 ILE 31 544 544 ILE ILE B . n B 1 32 VAL 32 545 545 VAL VAL B . n B 1 33 LEU 33 546 546 LEU LEU B . n B 1 34 ALA 34 547 547 ALA ALA B . n B 1 35 GLY 35 548 548 GLY GLY B . n B 1 36 ASP 36 549 549 ASP ASP B . n B 1 37 ALA 37 550 550 ALA ALA B . n B 1 38 ALA 38 551 551 ALA ALA B . n B 1 39 VAL 39 552 552 VAL VAL B . n B 1 40 GLY 40 553 553 GLY GLY B . n B 1 41 LYS 41 554 554 LYS LYS B . n B 1 42 SER 42 555 555 SER SER B . n B 1 43 SER 43 556 556 SER SER B . n B 1 44 PHE 44 557 557 PHE PHE B . n B 1 45 LEU 45 558 558 LEU LEU B . n B 1 46 MET 46 559 559 MET MET B . n B 1 47 ARG 47 560 560 ARG ARG B . n B 1 48 LEU 48 561 561 LEU LEU B . n B 1 49 CYS 49 562 562 CYS CYS B . n B 1 50 LYS 50 563 563 LYS LYS B . n B 1 51 ASN 51 564 564 ASN ASN B . n B 1 52 GLU 52 565 565 GLU GLU B . n B 1 53 PHE 53 566 566 PHE PHE B . n B 1 54 ARG 54 567 567 ARG ARG B . n B 1 55 GLU 55 568 ? ? ? B . n B 1 56 ASN 56 569 ? ? ? B . n B 1 57 ILE 57 570 ? ? ? B . n B 1 58 SER 58 571 ? ? ? B . n B 1 59 ALA 59 572 ? ? ? B . n B 1 60 THR 60 573 ? ? ? B . n B 1 61 LEU 61 574 ? ? ? B . n B 1 62 GLY 62 575 575 GLY GLY B . n B 1 63 VAL 63 576 576 VAL VAL B . n B 1 64 ASP 64 577 577 ASP ASP B . n B 1 65 PHE 65 578 578 PHE PHE B . n B 1 66 GLN 66 579 579 GLN GLN B . n B 1 67 MET 67 580 580 MET MET B . n B 1 68 LYS 68 581 581 LYS LYS B . n B 1 69 THR 69 582 582 THR THR B . n B 1 70 LEU 70 583 583 LEU LEU B . n B 1 71 ILE 71 584 584 ILE ILE B . n B 1 72 VAL 72 585 585 VAL VAL B . n B 1 73 ASP 73 586 586 ASP ASP B . n B 1 74 GLY 74 587 587 GLY GLY B . n B 1 75 GLU 75 588 588 GLU GLU B . n B 1 76 ARG 76 589 589 ARG ARG B . n B 1 77 THR 77 590 590 THR THR B . n B 1 78 VAL 78 591 591 VAL VAL B . n B 1 79 LEU 79 592 592 LEU LEU B . n B 1 80 GLN 80 593 593 GLN GLN B . n B 1 81 LEU 81 594 594 LEU LEU B . n B 1 82 TRP 82 595 595 TRP TRP B . n B 1 83 ASP 83 596 596 ASP ASP B . n B 1 84 THR 84 597 597 THR THR B . n B 1 85 ALA 85 598 598 ALA ALA B . n B 1 86 GLY 86 599 599 GLY GLY B . n B 1 87 GLN 87 600 600 GLN GLN B . n B 1 88 GLU 88 601 601 GLU GLU B . n B 1 89 ARG 89 602 602 ARG ARG B . n B 1 90 PHE 90 603 603 PHE PHE B . n B 1 91 ARG 91 604 604 ARG ARG B . n B 1 92 SER 92 605 605 SER SER B . n B 1 93 ILE 93 606 606 ILE ILE B . n B 1 94 ALA 94 607 607 ALA ALA B . n B 1 95 LYS 95 608 608 LYS LYS B . n B 1 96 SER 96 609 609 SER SER B . n B 1 97 TYR 97 610 610 TYR TYR B . n B 1 98 PHE 98 611 611 PHE PHE B . n B 1 99 ARG 99 612 612 ARG ARG B . n B 1 100 LYS 100 613 613 LYS LYS B . n B 1 101 ALA 101 614 614 ALA ALA B . n B 1 102 ASP 102 615 615 ASP ASP B . n B 1 103 GLY 103 616 616 GLY GLY B . n B 1 104 VAL 104 617 617 VAL VAL B . n B 1 105 LEU 105 618 618 LEU LEU B . n B 1 106 LEU 106 619 619 LEU LEU B . n B 1 107 LEU 107 620 620 LEU LEU B . n B 1 108 TYR 108 621 621 TYR TYR B . n B 1 109 ASP 109 622 622 ASP ASP B . n B 1 110 VAL 110 623 623 VAL VAL B . n B 1 111 THR 111 624 624 THR THR B . n B 1 112 CYS 112 625 625 CYS CYS B . n B 1 113 GLU 113 626 626 GLU GLU B . n B 1 114 LYS 114 627 627 LYS LYS B . n B 1 115 SER 115 628 628 SER SER B . n B 1 116 PHE 116 629 629 PHE PHE B . n B 1 117 LEU 117 630 630 LEU LEU B . n B 1 118 ASN 118 631 631 ASN ASN B . n B 1 119 ILE 119 632 632 ILE ILE B . n B 1 120 ARG 120 633 633 ARG ARG B . n B 1 121 GLU 121 634 634 GLU GLU B . n B 1 122 TRP 122 635 635 TRP TRP B . n B 1 123 VAL 123 636 636 VAL VAL B . n B 1 124 ASP 124 637 637 ASP ASP B . n B 1 125 MET 125 638 638 MET MET B . n B 1 126 ILE 126 639 639 ILE ILE B . n B 1 127 GLU 127 640 640 GLU GLU B . n B 1 128 ASP 128 641 641 ASP ASP B . n B 1 129 ALA 129 642 642 ALA ALA B . n B 1 130 ALA 130 643 643 ALA ALA B . n B 1 131 HIS 131 644 ? ? ? B . n B 1 132 GLU 132 645 ? ? ? B . n B 1 133 THR 133 646 ? ? ? B . n B 1 134 VAL 134 647 647 VAL VAL B . n B 1 135 PRO 135 648 648 PRO PRO B . n B 1 136 ILE 136 649 649 ILE ILE B . n B 1 137 MET 137 650 650 MET MET B . n B 1 138 LEU 138 651 651 LEU LEU B . n B 1 139 VAL 139 652 652 VAL VAL B . n B 1 140 GLY 140 653 653 GLY GLY B . n B 1 141 ASN 141 654 654 ASN ASN B . n B 1 142 LYS 142 655 655 LYS LYS B . n B 1 143 ALA 143 656 656 ALA ALA B . n B 1 144 ASP 144 657 657 ASP ASP B . n B 1 145 ILE 145 658 658 ILE ILE B . n B 1 146 ARG 146 659 659 ARG ARG B . n B 1 147 ASP 147 660 660 ASP ASP B . n B 1 148 THR 148 661 661 THR THR B . n B 1 149 ALA 149 662 662 ALA ALA B . n B 1 150 ALA 150 663 663 ALA ALA B . n B 1 151 THR 151 664 664 THR THR B . n B 1 152 GLU 152 665 665 GLU GLU B . n B 1 153 GLY 153 666 666 GLY GLY B . n B 1 154 GLN 154 667 667 GLN GLN B . n B 1 155 LYS 155 668 668 LYS LYS B . n B 1 156 CYS 156 669 669 CYS CYS B . n B 1 157 VAL 157 670 670 VAL VAL B . n B 1 158 PRO 158 671 671 PRO PRO B . n B 1 159 GLY 159 672 672 GLY GLY B . n B 1 160 HIS 160 673 673 HIS HIS B . n B 1 161 PHE 161 674 674 PHE PHE B . n B 1 162 GLY 162 675 675 GLY GLY B . n B 1 163 GLU 163 676 676 GLU GLU B . n B 1 164 LYS 164 677 677 LYS LYS B . n B 1 165 LEU 165 678 678 LEU LEU B . n B 1 166 ALA 166 679 679 ALA ALA B . n B 1 167 MET 167 680 680 MET MET B . n B 1 168 THR 168 681 681 THR THR B . n B 1 169 TYR 169 682 682 TYR TYR B . n B 1 170 GLY 170 683 683 GLY GLY B . n B 1 171 ALA 171 684 684 ALA ALA B . n B 1 172 LEU 172 685 685 LEU LEU B . n B 1 173 PHE 173 686 686 PHE PHE B . n B 1 174 CYS 174 687 687 CYS CYS B . n B 1 175 GLU 175 688 688 GLU GLU B . n B 1 176 THR 176 689 689 THR THR B . n B 1 177 SER 177 690 690 SER SER B . n B 1 178 ALA 178 691 691 ALA ALA B . n B 1 179 LYS 179 692 692 LYS LYS B . n B 1 180 ASP 180 693 693 ASP ASP B . n B 1 181 GLY 181 694 694 GLY GLY B . n B 1 182 SER 182 695 695 SER SER B . n B 1 183 ASN 183 696 696 ASN ASN B . n B 1 184 ILE 184 697 697 ILE ILE B . n B 1 185 VAL 185 698 698 VAL VAL B . n B 1 186 GLU 186 699 699 GLU GLU B . n B 1 187 ALA 187 700 700 ALA ALA B . n B 1 188 VAL 188 701 701 VAL VAL B . n B 1 189 LEU 189 702 702 LEU LEU B . n B 1 190 HIS 190 703 703 HIS HIS B . n B 1 191 LEU 191 704 704 LEU LEU B . n B 1 192 ALA 192 705 705 ALA ALA B . n B 1 193 ARG 193 706 706 ARG ARG B . n B 1 194 GLU 194 707 707 GLU GLU B . n B 1 195 VAL 195 708 708 VAL VAL B . n B 1 196 LYS 196 709 709 LYS LYS B . n B 1 197 LYS 197 710 710 LYS LYS B . n B 1 198 ARG 198 711 711 ARG ARG B . n B 1 199 THR 199 712 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP 1 1001 1001 GDP GDP A . D 3 UNX 1 101 101 UNX UNX A . E 2 GDP 1 1001 1001 GDP GDP B . F 3 UNX 1 102 102 UNX UNX B . G 3 UNX 1 103 103 UNX UNX B . H 4 HOH 1 1 1 HOH HOH A . H 4 HOH 2 2 2 HOH HOH A . H 4 HOH 3 3 3 HOH HOH A . H 4 HOH 4 4 4 HOH HOH A . H 4 HOH 5 5 5 HOH HOH A . H 4 HOH 6 6 6 HOH HOH A . H 4 HOH 7 7 7 HOH HOH A . H 4 HOH 8 8 8 HOH HOH A . H 4 HOH 9 10 10 HOH HOH A . H 4 HOH 10 11 11 HOH HOH A . H 4 HOH 11 12 12 HOH HOH A . H 4 HOH 12 13 13 HOH HOH A . H 4 HOH 13 15 15 HOH HOH A . H 4 HOH 14 16 16 HOH HOH A . H 4 HOH 15 17 17 HOH HOH A . H 4 HOH 16 18 18 HOH HOH A . H 4 HOH 17 19 19 HOH HOH A . H 4 HOH 18 20 20 HOH HOH A . H 4 HOH 19 21 21 HOH HOH A . I 4 HOH 1 9 9 HOH HOH B . I 4 HOH 2 14 14 HOH HOH B . I 4 HOH 3 22 22 HOH HOH B . I 4 HOH 4 23 23 HOH HOH B . I 4 HOH 5 24 24 HOH HOH B . I 4 HOH 6 25 25 HOH HOH B . I 4 HOH 7 26 26 HOH HOH B . I 4 HOH 8 27 27 HOH HOH B . I 4 HOH 9 28 28 HOH HOH B . I 4 HOH 10 29 29 HOH HOH B . I 4 HOH 11 30 30 HOH HOH B . I 4 HOH 12 31 31 HOH HOH B . I 4 HOH 13 32 32 HOH HOH B . I 4 HOH 14 33 33 HOH HOH B . I 4 HOH 15 34 34 HOH HOH B . I 4 HOH 16 35 35 HOH HOH B . I 4 HOH 17 36 36 HOH HOH B . I 4 HOH 18 37 37 HOH HOH B . I 4 HOH 19 38 38 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2460 ? 1 MORE -21 ? 1 'SSA (A^2)' 14480 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-03-27 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_phasing_MR.entry_id 2P5S _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 36.960 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 36.960 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method mr # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? program 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 4 PDB_EXTRACT 1.701 'Nov. 1, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOMOLECULE THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). THE BIOLOGICAL MOLECULE FOR THE PROTEIN IS UNKNOWN. ; # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 687 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 687 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.685 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.127 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 551 ? ? 82.32 11.23 2 1 ASP A 586 ? ? 51.59 -127.54 3 1 LYS A 655 ? ? 72.44 30.81 4 1 ASP B 586 ? ? 46.38 -134.60 5 1 LYS B 655 ? ? 70.31 36.73 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 589 ? CD ? A ARG 76 CD 2 1 Y 1 A ARG 589 ? NE ? A ARG 76 NE 3 1 Y 1 A ARG 589 ? CZ ? A ARG 76 CZ 4 1 Y 1 A ARG 589 ? NH1 ? A ARG 76 NH1 5 1 Y 1 A ARG 589 ? NH2 ? A ARG 76 NH2 6 1 Y 1 A LYS 627 ? CD ? A LYS 114 CD 7 1 Y 1 A LYS 627 ? CE ? A LYS 114 CE 8 1 Y 1 A LYS 627 ? NZ ? A LYS 114 NZ 9 1 Y 1 A ARG 633 ? NE ? A ARG 120 NE 10 1 Y 1 A ARG 633 ? CZ ? A ARG 120 CZ 11 1 Y 1 A ARG 633 ? NH1 ? A ARG 120 NH1 12 1 Y 1 A ARG 633 ? NH2 ? A ARG 120 NH2 13 1 Y 1 A GLU 665 ? CD ? A GLU 152 CD 14 1 Y 1 A GLU 665 ? OE1 ? A GLU 152 OE1 15 1 Y 1 A GLU 665 ? OE2 ? A GLU 152 OE2 16 1 Y 1 A LYS 668 ? CG ? A LYS 155 CG 17 1 Y 1 A LYS 668 ? CD ? A LYS 155 CD 18 1 Y 1 A LYS 668 ? CE ? A LYS 155 CE 19 1 Y 1 A LYS 668 ? NZ ? A LYS 155 NZ 20 1 Y 1 B LYS 543 ? CE ? B LYS 30 CE 21 1 Y 1 B LYS 543 ? NZ ? B LYS 30 NZ 22 1 Y 1 B GLU 565 ? CD ? B GLU 52 CD 23 1 Y 1 B GLU 565 ? OE1 ? B GLU 52 OE1 24 1 Y 1 B GLU 565 ? OE2 ? B GLU 52 OE2 25 1 Y 1 B ARG 567 ? CG ? B ARG 54 CG 26 1 Y 1 B ARG 567 ? CD ? B ARG 54 CD 27 1 Y 1 B ARG 567 ? NE ? B ARG 54 NE 28 1 Y 1 B ARG 567 ? CZ ? B ARG 54 CZ 29 1 Y 1 B ARG 567 ? NH1 ? B ARG 54 NH1 30 1 Y 1 B ARG 567 ? NH2 ? B ARG 54 NH2 31 1 Y 1 B ARG 589 ? NE ? B ARG 76 NE 32 1 Y 1 B ARG 589 ? CZ ? B ARG 76 CZ 33 1 Y 1 B ARG 589 ? NH1 ? B ARG 76 NH1 34 1 Y 1 B ARG 589 ? NH2 ? B ARG 76 NH2 35 1 Y 1 B ARG 602 ? CZ ? B ARG 89 CZ 36 1 Y 1 B ARG 602 ? NH1 ? B ARG 89 NH1 37 1 Y 1 B ARG 602 ? NH2 ? B ARG 89 NH2 38 1 Y 1 B LYS 613 ? CG ? B LYS 100 CG 39 1 Y 1 B LYS 613 ? CD ? B LYS 100 CD 40 1 Y 1 B LYS 613 ? CE ? B LYS 100 CE 41 1 Y 1 B LYS 613 ? NZ ? B LYS 100 NZ 42 1 Y 1 B GLU 626 ? CG ? B GLU 113 CG 43 1 Y 1 B GLU 626 ? CD ? B GLU 113 CD 44 1 Y 1 B GLU 626 ? OE1 ? B GLU 113 OE1 45 1 Y 1 B GLU 626 ? OE2 ? B GLU 113 OE2 46 1 Y 1 B LYS 668 ? CG ? B LYS 155 CG 47 1 Y 1 B LYS 668 ? CD ? B LYS 155 CD 48 1 Y 1 B LYS 668 ? CE ? B LYS 155 CE 49 1 Y 1 B LYS 668 ? NZ ? B LYS 155 NZ 50 1 Y 1 B GLU 676 ? CD ? B GLU 163 CD 51 1 Y 1 B GLU 676 ? OE1 ? B GLU 163 OE1 52 1 Y 1 B GLU 676 ? OE2 ? B GLU 163 OE2 53 1 Y 1 B LYS 677 ? CE ? B LYS 164 CE 54 1 Y 1 B LYS 677 ? NZ ? B LYS 164 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 514 ? A MET 1 2 1 Y 1 A GLY 515 ? A GLY 2 3 1 Y 1 A SER 516 ? A SER 3 4 1 Y 1 A SER 517 ? A SER 4 5 1 Y 1 A HIS 518 ? A HIS 5 6 1 Y 1 A HIS 519 ? A HIS 6 7 1 Y 1 A HIS 520 ? A HIS 7 8 1 Y 1 A HIS 521 ? A HIS 8 9 1 Y 1 A HIS 522 ? A HIS 9 10 1 Y 1 A HIS 523 ? A HIS 10 11 1 Y 1 A SER 524 ? A SER 11 12 1 Y 1 A SER 525 ? A SER 12 13 1 Y 1 A GLY 526 ? A GLY 13 14 1 Y 1 A LEU 527 ? A LEU 14 15 1 Y 1 A VAL 528 ? A VAL 15 16 1 Y 1 A PRO 529 ? A PRO 16 17 1 Y 1 A ARG 530 ? A ARG 17 18 1 Y 1 A GLY 531 ? A GLY 18 19 1 Y 1 A SER 532 ? A SER 19 20 1 Y 1 A ALA 533 ? A ALA 20 21 1 Y 1 A LYS 534 ? A LYS 21 22 1 Y 1 A SER 535 ? A SER 22 23 1 Y 1 A PHE 536 ? A PHE 23 24 1 Y 1 A SER 537 ? A SER 24 25 1 Y 1 A SER 538 ? A SER 25 26 1 Y 1 A GLN 539 ? A GLN 26 27 1 Y 1 A LYS 540 ? A LYS 27 28 1 Y 1 A GLU 568 ? A GLU 55 29 1 Y 1 A ASN 569 ? A ASN 56 30 1 Y 1 A ILE 570 ? A ILE 57 31 1 Y 1 A SER 571 ? A SER 58 32 1 Y 1 A ALA 572 ? A ALA 59 33 1 Y 1 A THR 573 ? A THR 60 34 1 Y 1 A LEU 574 ? A LEU 61 35 1 Y 1 A GLY 575 ? A GLY 62 36 1 Y 1 A VAL 576 ? A VAL 63 37 1 Y 1 A ASP 577 ? A ASP 64 38 1 Y 1 A HIS 644 ? A HIS 131 39 1 Y 1 A GLU 645 ? A GLU 132 40 1 Y 1 A THR 646 ? A THR 133 41 1 Y 1 A ARG 711 ? A ARG 198 42 1 Y 1 A THR 712 ? A THR 199 43 1 Y 1 B MET 514 ? B MET 1 44 1 Y 1 B GLY 515 ? B GLY 2 45 1 Y 1 B SER 516 ? B SER 3 46 1 Y 1 B SER 517 ? B SER 4 47 1 Y 1 B HIS 518 ? B HIS 5 48 1 Y 1 B HIS 519 ? B HIS 6 49 1 Y 1 B HIS 520 ? B HIS 7 50 1 Y 1 B HIS 521 ? B HIS 8 51 1 Y 1 B HIS 522 ? B HIS 9 52 1 Y 1 B HIS 523 ? B HIS 10 53 1 Y 1 B SER 524 ? B SER 11 54 1 Y 1 B SER 525 ? B SER 12 55 1 Y 1 B GLY 526 ? B GLY 13 56 1 Y 1 B LEU 527 ? B LEU 14 57 1 Y 1 B VAL 528 ? B VAL 15 58 1 Y 1 B PRO 529 ? B PRO 16 59 1 Y 1 B ARG 530 ? B ARG 17 60 1 Y 1 B GLY 531 ? B GLY 18 61 1 Y 1 B SER 532 ? B SER 19 62 1 Y 1 B ALA 533 ? B ALA 20 63 1 Y 1 B LYS 534 ? B LYS 21 64 1 Y 1 B SER 535 ? B SER 22 65 1 Y 1 B PHE 536 ? B PHE 23 66 1 Y 1 B SER 537 ? B SER 24 67 1 Y 1 B SER 538 ? B SER 25 68 1 Y 1 B GLN 539 ? B GLN 26 69 1 Y 1 B LYS 540 ? B LYS 27 70 1 Y 1 B GLU 568 ? B GLU 55 71 1 Y 1 B ASN 569 ? B ASN 56 72 1 Y 1 B ILE 570 ? B ILE 57 73 1 Y 1 B SER 571 ? B SER 58 74 1 Y 1 B ALA 572 ? B ALA 59 75 1 Y 1 B THR 573 ? B THR 60 76 1 Y 1 B LEU 574 ? B LEU 61 77 1 Y 1 B HIS 644 ? B HIS 131 78 1 Y 1 B GLU 645 ? B GLU 132 79 1 Y 1 B THR 646 ? B THR 133 80 1 Y 1 B THR 712 ? B THR 199 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1G16 _pdbx_initial_refinement_model.details 'pdb entry 1g16' #