data_2PHK # _entry.id 2PHK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PHK pdb_00002phk 10.2210/pdb2phk/pdb WWPDB D_1000178468 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2PHK _pdbx_database_status.recvd_initial_deposition_date 1998-06-18 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lowe, E.D.' 1 'Noble, M.E.M.' 2 'Skamnaki, V.T.' 3 'Oikonomakos, N.G.' 4 'Owen, D.J.' 5 'Johnson, L.N.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The crystal structure of a phosphorylase kinase peptide substrate complex: kinase substrate recognition.' 'EMBO J.' 16 6646 6658 1997 EMJODG UK 0261-4189 0897 ? 9362479 10.1093/emboj/16.22.6646 1 ;Two Structures of the Catalytic Domain of Phosphorylase Kinase: An Active Protein Kinase Complexed with Substrate Analogue and Product ; Structure 3 467 ? 1995 STRUE6 UK 0969-2126 2005 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lowe, E.D.' 1 ? primary 'Noble, M.E.' 2 ? primary 'Skamnaki, V.T.' 3 ? primary 'Oikonomakos, N.G.' 4 ? primary 'Owen, D.J.' 5 ? primary 'Johnson, L.N.' 6 ? 1 'Owen, D.J.' 7 ? 1 'Noble, M.E.' 8 ? 1 'Garman, E.F.' 9 ? 1 'Papageorgiou, A.C.' 10 ? 1 'Johnson, L.N.' 11 ? # _cell.entry_id 2PHK _cell.length_a 65.300 _cell.length_b 65.300 _cell.length_c 145.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PHK _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PHOSPHORYLASE KINASE' 31983.758 1 2.7.1.38 ? 'CATALYTIC DOMAIN' ? 2 polymer man MC-PEPTIDE 939.137 1 ? ? ? ? 3 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 4 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 86 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY ; ;GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY ; A ? 2 'polypeptide(L)' no no RQMSFRL RQMSFRL B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PHE n 1 3 TYR n 1 4 GLU n 1 5 ASN n 1 6 TYR n 1 7 GLU n 1 8 PRO n 1 9 LYS n 1 10 GLU n 1 11 ILE n 1 12 LEU n 1 13 GLY n 1 14 ARG n 1 15 GLY n 1 16 VAL n 1 17 SER n 1 18 SER n 1 19 VAL n 1 20 VAL n 1 21 ARG n 1 22 ARG n 1 23 CYS n 1 24 ILE n 1 25 HIS n 1 26 LYS n 1 27 PRO n 1 28 THR n 1 29 CYS n 1 30 LYS n 1 31 GLU n 1 32 TYR n 1 33 ALA n 1 34 VAL n 1 35 LYS n 1 36 ILE n 1 37 ILE n 1 38 ASP n 1 39 VAL n 1 40 THR n 1 41 GLY n 1 42 GLY n 1 43 GLY n 1 44 SER n 1 45 PHE n 1 46 SER n 1 47 ALA n 1 48 GLU n 1 49 GLU n 1 50 VAL n 1 51 GLN n 1 52 GLU n 1 53 LEU n 1 54 ARG n 1 55 GLU n 1 56 ALA n 1 57 THR n 1 58 LEU n 1 59 LYS n 1 60 GLU n 1 61 VAL n 1 62 ASP n 1 63 ILE n 1 64 LEU n 1 65 ARG n 1 66 LYS n 1 67 VAL n 1 68 SER n 1 69 GLY n 1 70 HIS n 1 71 PRO n 1 72 ASN n 1 73 ILE n 1 74 ILE n 1 75 GLN n 1 76 LEU n 1 77 LYS n 1 78 ASP n 1 79 THR n 1 80 TYR n 1 81 GLU n 1 82 THR n 1 83 ASN n 1 84 THR n 1 85 PHE n 1 86 PHE n 1 87 PHE n 1 88 LEU n 1 89 VAL n 1 90 PHE n 1 91 ASP n 1 92 LEU n 1 93 MET n 1 94 LYS n 1 95 LYS n 1 96 GLY n 1 97 GLU n 1 98 LEU n 1 99 PHE n 1 100 ASP n 1 101 TYR n 1 102 LEU n 1 103 THR n 1 104 GLU n 1 105 LYS n 1 106 VAL n 1 107 THR n 1 108 LEU n 1 109 SER n 1 110 GLU n 1 111 LYS n 1 112 GLU n 1 113 THR n 1 114 ARG n 1 115 LYS n 1 116 ILE n 1 117 MET n 1 118 ARG n 1 119 ALA n 1 120 LEU n 1 121 LEU n 1 122 GLU n 1 123 VAL n 1 124 ILE n 1 125 CYS n 1 126 ALA n 1 127 LEU n 1 128 HIS n 1 129 LYS n 1 130 LEU n 1 131 ASN n 1 132 ILE n 1 133 VAL n 1 134 HIS n 1 135 ARG n 1 136 ASP n 1 137 LEU n 1 138 LYS n 1 139 PRO n 1 140 GLU n 1 141 ASN n 1 142 ILE n 1 143 LEU n 1 144 LEU n 1 145 ASP n 1 146 ASP n 1 147 ASP n 1 148 MET n 1 149 ASN n 1 150 ILE n 1 151 LYS n 1 152 LEU n 1 153 THR n 1 154 ASP n 1 155 PHE n 1 156 GLY n 1 157 PHE n 1 158 SER n 1 159 CYS n 1 160 GLN n 1 161 LEU n 1 162 ASP n 1 163 PRO n 1 164 GLY n 1 165 GLU n 1 166 LYS n 1 167 LEU n 1 168 ARG n 1 169 GLU n 1 170 VAL n 1 171 CYS n 1 172 GLY n 1 173 THR n 1 174 PRO n 1 175 SER n 1 176 TYR n 1 177 LEU n 1 178 ALA n 1 179 PRO n 1 180 GLU n 1 181 ILE n 1 182 ILE n 1 183 GLU n 1 184 CYS n 1 185 SER n 1 186 MET n 1 187 ASN n 1 188 ASP n 1 189 ASN n 1 190 HIS n 1 191 PRO n 1 192 GLY n 1 193 TYR n 1 194 GLY n 1 195 LYS n 1 196 GLU n 1 197 VAL n 1 198 ASP n 1 199 MET n 1 200 TRP n 1 201 SER n 1 202 THR n 1 203 GLY n 1 204 VAL n 1 205 ILE n 1 206 MET n 1 207 TYR n 1 208 THR n 1 209 LEU n 1 210 LEU n 1 211 ALA n 1 212 GLY n 1 213 SER n 1 214 PRO n 1 215 PRO n 1 216 PHE n 1 217 TRP n 1 218 HIS n 1 219 ARG n 1 220 LYS n 1 221 GLN n 1 222 MET n 1 223 LEU n 1 224 MET n 1 225 LEU n 1 226 ARG n 1 227 MET n 1 228 ILE n 1 229 MET n 1 230 SER n 1 231 GLY n 1 232 ASN n 1 233 TYR n 1 234 GLN n 1 235 PHE n 1 236 GLY n 1 237 SER n 1 238 PRO n 1 239 GLU n 1 240 TRP n 1 241 ASP n 1 242 ASP n 1 243 TYR n 1 244 SER n 1 245 ASP n 1 246 THR n 1 247 VAL n 1 248 LYS n 1 249 ASP n 1 250 LEU n 1 251 VAL n 1 252 SER n 1 253 ARG n 1 254 PHE n 1 255 LEU n 1 256 VAL n 1 257 VAL n 1 258 GLN n 1 259 PRO n 1 260 GLN n 1 261 LYS n 1 262 ARG n 1 263 TYR n 1 264 THR n 1 265 ALA n 1 266 GLU n 1 267 GLU n 1 268 ALA n 1 269 LEU n 1 270 ALA n 1 271 HIS n 1 272 PRO n 1 273 PHE n 1 274 PHE n 1 275 GLN n 1 276 GLN n 1 277 TYR n 2 1 ARG n 2 2 GLN n 2 3 MET n 2 4 SER n 2 5 PHE n 2 6 ARG n 2 7 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name rabbit _entity_src_gen.gene_src_genus Oryctolagus _entity_src_gen.pdbx_gene_src_gene PHKG _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NEW ZEALAND WHITE' _entity_src_gen.gene_src_tissue 'SKELETAL MUSCLE' _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Oryctolagus cuniculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9986 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line BL21 _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ SKELETAL _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PMW172 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP PHKG1_RABIT 1 P00518 1 ;TRDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEVRHFSPRGKFKVICLTVLASVRIYYQ YRRVKPVTREIVIRDPYALRPLRRLIDAYAFRIYGHWVKKGQQQNRAALFENTPKAVLFSLAEDDY ; ? 2 PDB 2PHK 2 2PHK ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2PHK A 1 ? 277 ? P00518 14 ? 290 ? 14 290 2 2 2PHK B 1 ? 7 ? 2PHK 2 ? 8 ? 2 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2PHK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.7 _exptl_crystal.density_percent_sol 54.4 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 6.9' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'CCD AREA DETECTOR' _diffrn_detector.type XRII _diffrn_detector.pdbx_collection_date 1997-03-11 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM02' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM02 _diffrn_source.pdbx_wavelength 0.9 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2PHK _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.6 _reflns.number_obs 10062 _reflns.number_all ? _reflns.percent_possible_obs 86.3 _reflns.pdbx_Rmerge_I_obs 0.0980000 _reflns.pdbx_Rsym_value 0.0890000 _reflns.pdbx_netI_over_sigmaI 7.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.15 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 78.1 _reflns_shell.Rmerge_I_obs 0.3600000 _reflns_shell.pdbx_Rsym_value 0.3970000 _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2PHK _refine.ls_number_reflns_obs 21644 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.3 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs 86.3 _refine.ls_R_factor_obs 0.2530000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2360000 _refine.ls_R_factor_R_free 0.3000000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1PHK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2308 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 2433 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 25.0 # _struct.entry_id 2PHK _struct.title 'THE CRYSTAL STRUCTURE OF A PHOSPHORYLASE KINASE PEPTIDE SUBSTRATE COMPLEX: KINASE SUBSTRATE RECOGNITION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PHK _struct_keywords.pdbx_keywords 'COMPLEX (TRANSFERASE/PEPTIDE)' _struct_keywords.text ;CATALYTIC MECHANISM, DIMERIZATION, PHOSPHORYLASE KINASE, REVERSIBLE PHOSPHORYLISATION, SUBSTRATE RECOGNITION, COMPLEX (TRANSFERASE-PEPTIDE), COMPLEX (TRANSFERASE-PEPTIDE) complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 47 ? LYS A 66 ? ALA A 60 LYS A 79 1 ? 20 HELX_P HELX_P2 2 LEU A 98 ? LYS A 105 ? LEU A 111 LYS A 118 1 ? 8 HELX_P HELX_P3 3 GLU A 110 ? LEU A 130 ? GLU A 123 LEU A 143 1 ? 21 HELX_P HELX_P4 4 PRO A 139 ? ASN A 141 ? PRO A 152 ASN A 154 5 ? 3 HELX_P HELX_P5 5 PRO A 174 ? TYR A 176 ? PRO A 187 TYR A 189 5 ? 3 HELX_P HELX_P6 6 PRO A 179 ? CYS A 184 ? PRO A 192 CYS A 197 1 ? 6 HELX_P HELX_P7 7 LYS A 195 ? ALA A 211 ? LYS A 208 ALA A 224 5 ? 17 HELX_P HELX_P8 8 GLN A 221 ? SER A 230 ? GLN A 234 SER A 243 1 ? 10 HELX_P HELX_P9 9 GLU A 239 ? ASP A 242 ? GLU A 252 ASP A 255 5 ? 4 HELX_P HELX_P10 10 ASP A 245 ? PHE A 254 ? ASP A 258 PHE A 267 1 ? 10 HELX_P HELX_P11 11 PRO A 259 ? LYS A 261 ? PRO A 272 LYS A 274 5 ? 3 HELX_P HELX_P12 12 ALA A 265 ? ALA A 270 ? ALA A 278 ALA A 283 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASN 141 OD1 ? ? ? 1_555 D MN . MN ? ? A ASN 154 A MN 383 1_555 ? ? ? ? ? ? ? 2.267 ? ? metalc2 metalc ? ? A ASP 154 OD1 ? ? ? 1_555 C MN . MN ? ? A ASP 167 A MN 382 1_555 ? ? ? ? ? ? ? 2.367 ? ? metalc3 metalc ? ? A ASP 154 OD2 ? ? ? 1_555 C MN . MN ? ? A ASP 167 A MN 382 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc4 metalc ? ? A ASP 154 OD2 ? ? ? 1_555 D MN . MN ? ? A ASP 167 A MN 383 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc5 metalc ? ? E ATP . O3G ? ? ? 1_555 C MN . MN ? ? A ATP 381 A MN 382 1_555 ? ? ? ? ? ? ? 2.258 ? ? metalc6 metalc ? ? E ATP . O2B ? ? ? 1_555 C MN . MN ? ? A ATP 381 A MN 382 1_555 ? ? ? ? ? ? ? 2.258 ? ? metalc7 metalc ? ? E ATP . O2G ? ? ? 1_555 D MN . MN ? ? A ATP 381 A MN 383 1_555 ? ? ? ? ? ? ? 2.024 ? ? metalc8 metalc ? ? E ATP . O2A ? ? ? 1_555 D MN . MN ? ? A ATP 381 A MN 383 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc9 metalc ? ? E ATP . O3B ? ? ? 1_555 D MN . MN ? ? A ATP 381 A MN 383 1_555 ? ? ? ? ? ? ? 2.712 ? ? metalc10 metalc ? ? C MN . MN ? ? ? 1_555 G HOH . O ? ? A MN 382 A HOH 405 1_555 ? ? ? ? ? ? ? 2.483 ? ? metalc11 metalc ? ? C MN . MN ? ? ? 1_555 G HOH . O ? ? A MN 382 A HOH 418 1_555 ? ? ? ? ? ? ? 2.303 ? ? metalc12 metalc ? ? D MN . MN ? ? ? 1_555 G HOH . O ? ? A MN 383 A HOH 438 1_555 ? ? ? ? ? ? ? 2.221 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 6 ? PRO A 8 ? TYR A 19 PRO A 21 A 2 SER A 18 ? HIS A 25 ? SER A 31 HIS A 38 A 3 GLU A 31 ? ASP A 38 ? GLU A 44 ASP A 51 A 4 PHE A 85 ? ASP A 91 ? PHE A 98 ASP A 104 A 5 LEU A 76 ? GLU A 81 ? LEU A 89 GLU A 94 B 1 ILE A 142 ? LEU A 144 ? ILE A 155 LEU A 157 B 2 ILE A 150 ? LEU A 152 ? ILE A 163 LEU A 165 C 1 ILE A 11 ? ARG A 14 ? ILE A 24 ARG A 27 C 2 VAL A 19 ? ARG A 21 ? VAL A 32 ARG A 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 7 ? O GLU A 20 N ILE A 24 ? N ILE A 37 A 2 3 O VAL A 19 ? O VAL A 32 N ILE A 36 ? N ILE A 49 A 3 4 O ALA A 33 ? O ALA A 46 N PHE A 90 ? N PHE A 103 A 4 5 O PHE A 87 ? O PHE A 100 N TYR A 80 ? N TYR A 93 B 1 2 O LEU A 143 ? O LEU A 156 N LYS A 151 ? N LYS A 164 C 1 2 O LEU A 12 ? O LEU A 25 N VAL A 20 ? N VAL A 33 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 382 ? 4 'BINDING SITE FOR RESIDUE MN A 382' AC2 Software A MN 383 ? 4 'BINDING SITE FOR RESIDUE MN A 383' AC3 Software A ATP 381 ? 22 'BINDING SITE FOR RESIDUE ATP A 381' AC4 Software A GOL 384 ? 5 'BINDING SITE FOR RESIDUE GOL A 384' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 154 ? ASP A 167 . ? 1_555 ? 2 AC1 4 ATP E . ? ATP A 381 . ? 1_555 ? 3 AC1 4 HOH G . ? HOH A 405 . ? 1_555 ? 4 AC1 4 HOH G . ? HOH A 418 . ? 1_555 ? 5 AC2 4 ASN A 141 ? ASN A 154 . ? 1_555 ? 6 AC2 4 ASP A 154 ? ASP A 167 . ? 1_555 ? 7 AC2 4 ATP E . ? ATP A 381 . ? 1_555 ? 8 AC2 4 HOH G . ? HOH A 438 . ? 1_555 ? 9 AC3 22 GLY A 13 ? GLY A 26 . ? 1_555 ? 10 AC3 22 GLY A 15 ? GLY A 28 . ? 1_555 ? 11 AC3 22 SER A 18 ? SER A 31 . ? 1_555 ? 12 AC3 22 VAL A 20 ? VAL A 33 . ? 1_555 ? 13 AC3 22 ALA A 33 ? ALA A 46 . ? 1_555 ? 14 AC3 22 LYS A 35 ? LYS A 48 . ? 1_555 ? 15 AC3 22 ASP A 91 ? ASP A 104 . ? 1_555 ? 16 AC3 22 MET A 93 ? MET A 106 . ? 1_555 ? 17 AC3 22 GLU A 97 ? GLU A 110 . ? 1_555 ? 18 AC3 22 LYS A 138 ? LYS A 151 . ? 1_555 ? 19 AC3 22 GLU A 140 ? GLU A 153 . ? 1_555 ? 20 AC3 22 ASN A 141 ? ASN A 154 . ? 1_555 ? 21 AC3 22 ASP A 154 ? ASP A 167 . ? 1_555 ? 22 AC3 22 MN C . ? MN A 382 . ? 1_555 ? 23 AC3 22 MN D . ? MN A 383 . ? 1_555 ? 24 AC3 22 HOH G . ? HOH A 385 . ? 1_555 ? 25 AC3 22 HOH G . ? HOH A 387 . ? 1_555 ? 26 AC3 22 HOH G . ? HOH A 388 . ? 1_555 ? 27 AC3 22 HOH G . ? HOH A 438 . ? 1_555 ? 28 AC3 22 HOH G . ? HOH A 458 . ? 1_555 ? 29 AC3 22 ARG B 1 ? ARG B 2 . ? 1_555 ? 30 AC3 22 SER B 4 ? SER B 5 . ? 1_555 ? 31 AC4 5 SER A 237 ? SER A 250 . ? 5_565 ? 32 AC4 5 LYS A 261 ? LYS A 274 . ? 1_555 ? 33 AC4 5 ARG A 262 ? ARG A 275 . ? 1_555 ? 34 AC4 5 GLU A 267 ? GLU A 280 . ? 1_555 ? 35 AC4 5 HOH G . ? HOH A 467 . ? 5_565 ? # _database_PDB_matrix.entry_id 2PHK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2PHK _atom_sites.fract_transf_matrix[1][1] 0.015314 _atom_sites.fract_transf_matrix[1][2] 0.008842 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017683 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006859 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 14 14 GLY GLY A . n A 1 2 PHE 2 15 15 PHE PHE A . n A 1 3 TYR 3 16 16 TYR TYR A . n A 1 4 GLU 4 17 17 GLU GLU A . n A 1 5 ASN 5 18 18 ASN ASN A . n A 1 6 TYR 6 19 19 TYR TYR A . n A 1 7 GLU 7 20 20 GLU GLU A . n A 1 8 PRO 8 21 21 PRO PRO A . n A 1 9 LYS 9 22 22 LYS LYS A . n A 1 10 GLU 10 23 23 GLU GLU A . n A 1 11 ILE 11 24 24 ILE ILE A . n A 1 12 LEU 12 25 25 LEU LEU A . n A 1 13 GLY 13 26 26 GLY GLY A . n A 1 14 ARG 14 27 27 ARG ARG A . n A 1 15 GLY 15 28 28 GLY GLY A . n A 1 16 VAL 16 29 29 VAL VAL A . n A 1 17 SER 17 30 30 SER SER A . n A 1 18 SER 18 31 31 SER SER A . n A 1 19 VAL 19 32 32 VAL VAL A . n A 1 20 VAL 20 33 33 VAL VAL A . n A 1 21 ARG 21 34 34 ARG ARG A . n A 1 22 ARG 22 35 35 ARG ARG A . n A 1 23 CYS 23 36 36 CYS CYS A . n A 1 24 ILE 24 37 37 ILE ILE A . n A 1 25 HIS 25 38 38 HIS HIS A . n A 1 26 LYS 26 39 39 LYS LYS A . n A 1 27 PRO 27 40 40 PRO PRO A . n A 1 28 THR 28 41 41 THR THR A . n A 1 29 CYS 29 42 42 CYS CYS A . n A 1 30 LYS 30 43 43 LYS LYS A . n A 1 31 GLU 31 44 44 GLU GLU A . n A 1 32 TYR 32 45 45 TYR TYR A . n A 1 33 ALA 33 46 46 ALA ALA A . n A 1 34 VAL 34 47 47 VAL VAL A . n A 1 35 LYS 35 48 48 LYS LYS A . n A 1 36 ILE 36 49 49 ILE ILE A . n A 1 37 ILE 37 50 50 ILE ILE A . n A 1 38 ASP 38 51 51 ASP ASP A . n A 1 39 VAL 39 52 52 VAL VAL A . n A 1 40 THR 40 53 53 THR THR A . n A 1 41 GLY 41 54 54 GLY GLY A . n A 1 42 GLY 42 55 55 GLY GLY A . n A 1 43 GLY 43 56 56 GLY GLY A . n A 1 44 SER 44 57 57 SER SER A . n A 1 45 PHE 45 58 58 PHE PHE A . n A 1 46 SER 46 59 59 SER SER A . n A 1 47 ALA 47 60 60 ALA ALA A . n A 1 48 GLU 48 61 61 GLU GLU A . n A 1 49 GLU 49 62 62 GLU GLU A . n A 1 50 VAL 50 63 63 VAL VAL A . n A 1 51 GLN 51 64 64 GLN GLN A . n A 1 52 GLU 52 65 65 GLU GLU A . n A 1 53 LEU 53 66 66 LEU LEU A . n A 1 54 ARG 54 67 67 ARG ARG A . n A 1 55 GLU 55 68 68 GLU GLU A . n A 1 56 ALA 56 69 69 ALA ALA A . n A 1 57 THR 57 70 70 THR THR A . n A 1 58 LEU 58 71 71 LEU LEU A . n A 1 59 LYS 59 72 72 LYS LYS A . n A 1 60 GLU 60 73 73 GLU GLU A . n A 1 61 VAL 61 74 74 VAL VAL A . n A 1 62 ASP 62 75 75 ASP ASP A . n A 1 63 ILE 63 76 76 ILE ILE A . n A 1 64 LEU 64 77 77 LEU LEU A . n A 1 65 ARG 65 78 78 ARG ARG A . n A 1 66 LYS 66 79 79 LYS LYS A . n A 1 67 VAL 67 80 80 VAL VAL A . n A 1 68 SER 68 81 81 SER SER A . n A 1 69 GLY 69 82 82 GLY GLY A . n A 1 70 HIS 70 83 83 HIS HIS A . n A 1 71 PRO 71 84 84 PRO PRO A . n A 1 72 ASN 72 85 85 ASN ASN A . n A 1 73 ILE 73 86 86 ILE ILE A . n A 1 74 ILE 74 87 87 ILE ILE A . n A 1 75 GLN 75 88 88 GLN GLN A . n A 1 76 LEU 76 89 89 LEU LEU A . n A 1 77 LYS 77 90 90 LYS LYS A . n A 1 78 ASP 78 91 91 ASP ASP A . n A 1 79 THR 79 92 92 THR THR A . n A 1 80 TYR 80 93 93 TYR TYR A . n A 1 81 GLU 81 94 94 GLU GLU A . n A 1 82 THR 82 95 95 THR THR A . n A 1 83 ASN 83 96 96 ASN ASN A . n A 1 84 THR 84 97 97 THR THR A . n A 1 85 PHE 85 98 98 PHE PHE A . n A 1 86 PHE 86 99 99 PHE PHE A . n A 1 87 PHE 87 100 100 PHE PHE A . n A 1 88 LEU 88 101 101 LEU LEU A . n A 1 89 VAL 89 102 102 VAL VAL A . n A 1 90 PHE 90 103 103 PHE PHE A . n A 1 91 ASP 91 104 104 ASP ASP A . n A 1 92 LEU 92 105 105 LEU LEU A . n A 1 93 MET 93 106 106 MET MET A . n A 1 94 LYS 94 107 107 LYS LYS A . n A 1 95 LYS 95 108 108 LYS LYS A . n A 1 96 GLY 96 109 109 GLY GLY A . n A 1 97 GLU 97 110 110 GLU GLU A . n A 1 98 LEU 98 111 111 LEU LEU A . n A 1 99 PHE 99 112 112 PHE PHE A . n A 1 100 ASP 100 113 113 ASP ASP A . n A 1 101 TYR 101 114 114 TYR TYR A . n A 1 102 LEU 102 115 115 LEU LEU A . n A 1 103 THR 103 116 116 THR THR A . n A 1 104 GLU 104 117 117 GLU GLU A . n A 1 105 LYS 105 118 118 LYS LYS A . n A 1 106 VAL 106 119 119 VAL VAL A . n A 1 107 THR 107 120 120 THR THR A . n A 1 108 LEU 108 121 121 LEU LEU A . n A 1 109 SER 109 122 122 SER SER A . n A 1 110 GLU 110 123 123 GLU GLU A . n A 1 111 LYS 111 124 124 LYS LYS A . n A 1 112 GLU 112 125 125 GLU GLU A . n A 1 113 THR 113 126 126 THR THR A . n A 1 114 ARG 114 127 127 ARG ARG A . n A 1 115 LYS 115 128 128 LYS LYS A . n A 1 116 ILE 116 129 129 ILE ILE A . n A 1 117 MET 117 130 130 MET MET A . n A 1 118 ARG 118 131 131 ARG ARG A . n A 1 119 ALA 119 132 132 ALA ALA A . n A 1 120 LEU 120 133 133 LEU LEU A . n A 1 121 LEU 121 134 134 LEU LEU A . n A 1 122 GLU 122 135 135 GLU GLU A . n A 1 123 VAL 123 136 136 VAL VAL A . n A 1 124 ILE 124 137 137 ILE ILE A . n A 1 125 CYS 125 138 138 CYS CYS A . n A 1 126 ALA 126 139 139 ALA ALA A . n A 1 127 LEU 127 140 140 LEU LEU A . n A 1 128 HIS 128 141 141 HIS HIS A . n A 1 129 LYS 129 142 142 LYS LYS A . n A 1 130 LEU 130 143 143 LEU LEU A . n A 1 131 ASN 131 144 144 ASN ASN A . n A 1 132 ILE 132 145 145 ILE ILE A . n A 1 133 VAL 133 146 146 VAL VAL A . n A 1 134 HIS 134 147 147 HIS HIS A . n A 1 135 ARG 135 148 148 ARG ARG A . n A 1 136 ASP 136 149 149 ASP ASP A . n A 1 137 LEU 137 150 150 LEU LEU A . n A 1 138 LYS 138 151 151 LYS LYS A . n A 1 139 PRO 139 152 152 PRO PRO A . n A 1 140 GLU 140 153 153 GLU GLU A . n A 1 141 ASN 141 154 154 ASN ASN A . n A 1 142 ILE 142 155 155 ILE ILE A . n A 1 143 LEU 143 156 156 LEU LEU A . n A 1 144 LEU 144 157 157 LEU LEU A . n A 1 145 ASP 145 158 158 ASP ASP A . n A 1 146 ASP 146 159 159 ASP ASP A . n A 1 147 ASP 147 160 160 ASP ASP A . n A 1 148 MET 148 161 161 MET MET A . n A 1 149 ASN 149 162 162 ASN ASN A . n A 1 150 ILE 150 163 163 ILE ILE A . n A 1 151 LYS 151 164 164 LYS LYS A . n A 1 152 LEU 152 165 165 LEU LEU A . n A 1 153 THR 153 166 166 THR THR A . n A 1 154 ASP 154 167 167 ASP ASP A . n A 1 155 PHE 155 168 168 PHE PHE A . n A 1 156 GLY 156 169 169 GLY GLY A . n A 1 157 PHE 157 170 170 PHE PHE A . n A 1 158 SER 158 171 171 SER SER A . n A 1 159 CYS 159 172 172 CYS CYS A . n A 1 160 GLN 160 173 173 GLN GLN A . n A 1 161 LEU 161 174 174 LEU LEU A . n A 1 162 ASP 162 175 175 ASP ASP A . n A 1 163 PRO 163 176 176 PRO PRO A . n A 1 164 GLY 164 177 177 GLY GLY A . n A 1 165 GLU 165 178 178 GLU GLU A . n A 1 166 LYS 166 179 179 LYS LYS A . n A 1 167 LEU 167 180 180 LEU LEU A . n A 1 168 ARG 168 181 181 ARG ARG A . n A 1 169 GLU 169 182 182 GLU GLU A . n A 1 170 VAL 170 183 183 VAL VAL A . n A 1 171 CYS 171 184 184 CYS CYS A . n A 1 172 GLY 172 185 185 GLY GLY A . n A 1 173 THR 173 186 186 THR THR A . n A 1 174 PRO 174 187 187 PRO PRO A . n A 1 175 SER 175 188 188 SER SER A . n A 1 176 TYR 176 189 189 TYR TYR A . n A 1 177 LEU 177 190 190 LEU LEU A . n A 1 178 ALA 178 191 191 ALA ALA A . n A 1 179 PRO 179 192 192 PRO PRO A . n A 1 180 GLU 180 193 193 GLU GLU A . n A 1 181 ILE 181 194 194 ILE ILE A . n A 1 182 ILE 182 195 195 ILE ILE A . n A 1 183 GLU 183 196 196 GLU GLU A . n A 1 184 CYS 184 197 197 CYS CYS A . n A 1 185 SER 185 198 198 SER SER A . n A 1 186 MET 186 199 199 MET MET A . n A 1 187 ASN 187 200 200 ASN ASN A . n A 1 188 ASP 188 201 201 ASP ASP A . n A 1 189 ASN 189 202 202 ASN ASN A . n A 1 190 HIS 190 203 203 HIS HIS A . n A 1 191 PRO 191 204 204 PRO PRO A . n A 1 192 GLY 192 205 205 GLY GLY A . n A 1 193 TYR 193 206 206 TYR TYR A . n A 1 194 GLY 194 207 207 GLY GLY A . n A 1 195 LYS 195 208 208 LYS LYS A . n A 1 196 GLU 196 209 209 GLU GLU A . n A 1 197 VAL 197 210 210 VAL VAL A . n A 1 198 ASP 198 211 211 ASP ASP A . n A 1 199 MET 199 212 212 MET MET A . n A 1 200 TRP 200 213 213 TRP TRP A . n A 1 201 SER 201 214 214 SER SER A . n A 1 202 THR 202 215 215 THR THR A . n A 1 203 GLY 203 216 216 GLY GLY A . n A 1 204 VAL 204 217 217 VAL VAL A . n A 1 205 ILE 205 218 218 ILE ILE A . n A 1 206 MET 206 219 219 MET MET A . n A 1 207 TYR 207 220 220 TYR TYR A . n A 1 208 THR 208 221 221 THR THR A . n A 1 209 LEU 209 222 222 LEU LEU A . n A 1 210 LEU 210 223 223 LEU LEU A . n A 1 211 ALA 211 224 224 ALA ALA A . n A 1 212 GLY 212 225 225 GLY GLY A . n A 1 213 SER 213 226 226 SER SER A . n A 1 214 PRO 214 227 227 PRO PRO A . n A 1 215 PRO 215 228 228 PRO PRO A . n A 1 216 PHE 216 229 229 PHE PHE A . n A 1 217 TRP 217 230 230 TRP TRP A . n A 1 218 HIS 218 231 231 HIS HIS A . n A 1 219 ARG 219 232 232 ARG ARG A . n A 1 220 LYS 220 233 233 LYS LYS A . n A 1 221 GLN 221 234 234 GLN GLN A . n A 1 222 MET 222 235 235 MET MET A . n A 1 223 LEU 223 236 236 LEU LEU A . n A 1 224 MET 224 237 237 MET MET A . n A 1 225 LEU 225 238 238 LEU LEU A . n A 1 226 ARG 226 239 239 ARG ARG A . n A 1 227 MET 227 240 240 MET MET A . n A 1 228 ILE 228 241 241 ILE ILE A . n A 1 229 MET 229 242 242 MET MET A . n A 1 230 SER 230 243 243 SER SER A . n A 1 231 GLY 231 244 244 GLY GLY A . n A 1 232 ASN 232 245 245 ASN ASN A . n A 1 233 TYR 233 246 246 TYR TYR A . n A 1 234 GLN 234 247 247 GLN GLN A . n A 1 235 PHE 235 248 248 PHE PHE A . n A 1 236 GLY 236 249 249 GLY GLY A . n A 1 237 SER 237 250 250 SER SER A . n A 1 238 PRO 238 251 251 PRO PRO A . n A 1 239 GLU 239 252 252 GLU GLU A . n A 1 240 TRP 240 253 253 TRP TRP A . n A 1 241 ASP 241 254 254 ASP ASP A . n A 1 242 ASP 242 255 255 ASP ASP A . n A 1 243 TYR 243 256 256 TYR TYR A . n A 1 244 SER 244 257 257 SER SER A . n A 1 245 ASP 245 258 258 ASP ASP A . n A 1 246 THR 246 259 259 THR THR A . n A 1 247 VAL 247 260 260 VAL VAL A . n A 1 248 LYS 248 261 261 LYS LYS A . n A 1 249 ASP 249 262 262 ASP ASP A . n A 1 250 LEU 250 263 263 LEU LEU A . n A 1 251 VAL 251 264 264 VAL VAL A . n A 1 252 SER 252 265 265 SER SER A . n A 1 253 ARG 253 266 266 ARG ARG A . n A 1 254 PHE 254 267 267 PHE PHE A . n A 1 255 LEU 255 268 268 LEU LEU A . n A 1 256 VAL 256 269 269 VAL VAL A . n A 1 257 VAL 257 270 270 VAL VAL A . n A 1 258 GLN 258 271 271 GLN GLN A . n A 1 259 PRO 259 272 272 PRO PRO A . n A 1 260 GLN 260 273 273 GLN GLN A . n A 1 261 LYS 261 274 274 LYS LYS A . n A 1 262 ARG 262 275 275 ARG ARG A . n A 1 263 TYR 263 276 276 TYR TYR A . n A 1 264 THR 264 277 277 THR THR A . n A 1 265 ALA 265 278 278 ALA ALA A . n A 1 266 GLU 266 279 279 GLU GLU A . n A 1 267 GLU 267 280 280 GLU GLU A . n A 1 268 ALA 268 281 281 ALA ALA A . n A 1 269 LEU 269 282 282 LEU LEU A . n A 1 270 ALA 270 283 283 ALA ALA A . n A 1 271 HIS 271 284 284 HIS HIS A . n A 1 272 PRO 272 285 285 PRO PRO A . n A 1 273 PHE 273 286 286 PHE PHE A . n A 1 274 PHE 274 287 287 PHE PHE A . n A 1 275 GLN 275 288 288 GLN GLN A . n A 1 276 GLN 276 289 289 GLN GLN A . n A 1 277 TYR 277 290 290 TYR TYR A . n B 2 1 ARG 1 2 2 ARG ARG B . n B 2 2 GLN 2 3 3 GLN GLN B . n B 2 3 MET 3 4 4 MET MET B . n B 2 4 SER 4 5 5 SER SER B . n B 2 5 PHE 5 6 6 PHE PHE B . n B 2 6 ARG 6 7 7 ARG ARG B . n B 2 7 LEU 7 8 8 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MN 1 382 382 MN MN A . D 3 MN 1 383 383 MN MN A . E 4 ATP 1 381 381 ATP ATP A . F 5 GOL 1 384 21 GOL GOL A . G 6 HOH 1 385 1 HOH HOH A . G 6 HOH 2 386 2 HOH HOH A . G 6 HOH 3 387 3 HOH HOH A . G 6 HOH 4 388 4 HOH HOH A . G 6 HOH 5 389 5 HOH HOH A . G 6 HOH 6 390 8 HOH HOH A . G 6 HOH 7 391 9 HOH HOH A . G 6 HOH 8 392 10 HOH HOH A . G 6 HOH 9 393 11 HOH HOH A . G 6 HOH 10 394 12 HOH HOH A . G 6 HOH 11 395 13 HOH HOH A . G 6 HOH 12 396 14 HOH HOH A . G 6 HOH 13 397 15 HOH HOH A . G 6 HOH 14 398 16 HOH HOH A . G 6 HOH 15 399 17 HOH HOH A . G 6 HOH 16 400 18 HOH HOH A . G 6 HOH 17 401 19 HOH HOH A . G 6 HOH 18 402 20 HOH HOH A . G 6 HOH 19 403 21 HOH HOH A . G 6 HOH 20 404 22 HOH HOH A . G 6 HOH 21 405 23 HOH HOH A . G 6 HOH 22 406 25 HOH HOH A . G 6 HOH 23 407 26 HOH HOH A . G 6 HOH 24 408 27 HOH HOH A . G 6 HOH 25 409 28 HOH HOH A . G 6 HOH 26 410 29 HOH HOH A . G 6 HOH 27 411 30 HOH HOH A . G 6 HOH 28 412 31 HOH HOH A . G 6 HOH 29 413 32 HOH HOH A . G 6 HOH 30 414 33 HOH HOH A . G 6 HOH 31 415 34 HOH HOH A . G 6 HOH 32 416 35 HOH HOH A . G 6 HOH 33 417 36 HOH HOH A . G 6 HOH 34 418 37 HOH HOH A . G 6 HOH 35 419 38 HOH HOH A . G 6 HOH 36 420 39 HOH HOH A . G 6 HOH 37 421 40 HOH HOH A . G 6 HOH 38 422 41 HOH HOH A . G 6 HOH 39 423 42 HOH HOH A . G 6 HOH 40 424 43 HOH HOH A . G 6 HOH 41 425 44 HOH HOH A . G 6 HOH 42 426 45 HOH HOH A . G 6 HOH 43 427 46 HOH HOH A . G 6 HOH 44 428 47 HOH HOH A . G 6 HOH 45 429 48 HOH HOH A . G 6 HOH 46 430 50 HOH HOH A . G 6 HOH 47 431 51 HOH HOH A . G 6 HOH 48 432 52 HOH HOH A . G 6 HOH 49 433 53 HOH HOH A . G 6 HOH 50 434 54 HOH HOH A . G 6 HOH 51 435 55 HOH HOH A . G 6 HOH 52 436 56 HOH HOH A . G 6 HOH 53 437 57 HOH HOH A . G 6 HOH 54 438 58 HOH HOH A . G 6 HOH 55 439 59 HOH HOH A . G 6 HOH 56 440 60 HOH HOH A . G 6 HOH 57 441 61 HOH HOH A . G 6 HOH 58 442 62 HOH HOH A . G 6 HOH 59 443 63 HOH HOH A . G 6 HOH 60 444 64 HOH HOH A . G 6 HOH 61 445 65 HOH HOH A . G 6 HOH 62 446 66 HOH HOH A . G 6 HOH 63 447 67 HOH HOH A . G 6 HOH 64 448 68 HOH HOH A . G 6 HOH 65 449 69 HOH HOH A . G 6 HOH 66 450 70 HOH HOH A . G 6 HOH 67 451 71 HOH HOH A . G 6 HOH 68 452 72 HOH HOH A . G 6 HOH 69 453 73 HOH HOH A . G 6 HOH 70 454 74 HOH HOH A . G 6 HOH 71 455 75 HOH HOH A . G 6 HOH 72 456 76 HOH HOH A . G 6 HOH 73 457 77 HOH HOH A . G 6 HOH 74 458 79 HOH HOH A . G 6 HOH 75 459 80 HOH HOH A . G 6 HOH 76 460 81 HOH HOH A . G 6 HOH 77 461 82 HOH HOH A . G 6 HOH 78 462 83 HOH HOH A . G 6 HOH 79 463 84 HOH HOH A . G 6 HOH 80 464 85 HOH HOH A . G 6 HOH 81 465 86 HOH HOH A . G 6 HOH 82 466 87 HOH HOH A . G 6 HOH 83 467 88 HOH HOH A . H 6 HOH 1 24 24 HOH HOH B . H 6 HOH 2 49 49 HOH HOH B . H 6 HOH 3 78 78 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+2/3 -0.5000000000 -0.8660254038 0.0000000000 97.9500000000 -0.8660254038 0.5000000000 0.0000000000 56.5514588671 0.0000000000 0.0000000000 -1.0000000000 97.2000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 141 ? A ASN 154 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 89.1 ? 2 OD1 ? A ASN 141 ? A ASN 154 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O2G ? E ATP . ? A ATP 381 ? 1_555 121.8 ? 3 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O2G ? E ATP . ? A ATP 381 ? 1_555 92.7 ? 4 OD1 ? A ASN 141 ? A ASN 154 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O2A ? E ATP . ? A ATP 381 ? 1_555 91.8 ? 5 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O2A ? E ATP . ? A ATP 381 ? 1_555 86.1 ? 6 O2G ? E ATP . ? A ATP 381 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O2A ? E ATP . ? A ATP 381 ? 1_555 146.4 ? 7 OD1 ? A ASN 141 ? A ASN 154 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O3B ? E ATP . ? A ATP 381 ? 1_555 175.4 ? 8 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O3B ? E ATP . ? A ATP 381 ? 1_555 91.2 ? 9 O2G ? E ATP . ? A ATP 381 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O3B ? E ATP . ? A ATP 381 ? 1_555 62.7 ? 10 O2A ? E ATP . ? A ATP 381 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O3B ? E ATP . ? A ATP 381 ? 1_555 83.7 ? 11 OD1 ? A ASN 141 ? A ASN 154 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O ? G HOH . ? A HOH 438 ? 1_555 87.7 ? 12 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O ? G HOH . ? A HOH 438 ? 1_555 176.5 ? 13 O2G ? E ATP . ? A ATP 381 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O ? G HOH . ? A HOH 438 ? 1_555 90.2 ? 14 O2A ? E ATP . ? A ATP 381 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O ? G HOH . ? A HOH 438 ? 1_555 92.5 ? 15 O3B ? E ATP . ? A ATP 381 ? 1_555 MN ? D MN . ? A MN 383 ? 1_555 O ? G HOH . ? A HOH 438 ? 1_555 91.9 ? 16 OD1 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 55.2 ? 17 OD1 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O3G ? E ATP . ? A ATP 381 ? 1_555 148.4 ? 18 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O3G ? E ATP . ? A ATP 381 ? 1_555 93.8 ? 19 OD1 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O2B ? E ATP . ? A ATP 381 ? 1_555 87.6 ? 20 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O2B ? E ATP . ? A ATP 381 ? 1_555 83.6 ? 21 O3G ? E ATP . ? A ATP 381 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O2B ? E ATP . ? A ATP 381 ? 1_555 82.1 ? 22 OD1 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 405 ? 1_555 98.0 ? 23 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 405 ? 1_555 102.3 ? 24 O3G ? E ATP . ? A ATP 381 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 405 ? 1_555 94.5 ? 25 O2B ? E ATP . ? A ATP 381 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 405 ? 1_555 173.5 ? 26 OD1 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 418 ? 1_555 108.3 ? 27 OD2 ? A ASP 154 ? A ASP 167 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 418 ? 1_555 163.4 ? 28 O3G ? E ATP . ? A ATP 381 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 418 ? 1_555 102.2 ? 29 O2B ? E ATP . ? A ATP 381 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 418 ? 1_555 94.4 ? 30 O ? G HOH . ? A HOH 405 ? 1_555 MN ? C MN . ? A MN 382 ? 1_555 O ? G HOH . ? A HOH 418 ? 1_555 80.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-01-13 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-04 5 'Structure model' 1 4 2018-04-11 6 'Structure model' 1 5 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 5 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 5 'Structure model' diffrn_source 3 6 'Structure model' database_2 4 6 'Structure model' pdbx_initial_refinement_model 5 6 'Structure model' pdbx_struct_conn_angle 6 6 'Structure model' struct_conn 7 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.type' 2 5 'Structure model' '_diffrn_source.pdbx_synchrotron_beamline' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.value' 18 6 'Structure model' '_struct_conn.pdbx_dist_value' 19 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 REFMAC refinement . ? 2 MOSFLM 'data reduction' . ? 3 CCP4 'data scaling' . ? 4 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B ARG 2 ? ? 1_555 SD B MET 4 ? ? 6_765 0.92 2 1 N A GLN 234 ? ? 1_555 O B ARG 7 ? ? 6_765 1.05 3 1 N A MET 235 ? ? 1_555 O B LEU 8 ? ? 6_765 1.12 4 1 OE2 A GLU 62 ? ? 1_555 CE1 A HIS 231 ? ? 6_765 1.13 5 1 O B ARG 2 ? ? 1_555 CG B MET 4 ? ? 6_765 1.18 6 1 C B ARG 2 ? ? 1_555 SD B MET 4 ? ? 6_765 1.26 7 1 CA A GLN 234 ? ? 1_555 O B ARG 7 ? ? 6_765 1.27 8 1 OE2 A GLU 62 ? ? 1_555 ND1 A HIS 231 ? ? 6_765 1.28 9 1 CB B ARG 2 ? ? 1_555 CE B MET 4 ? ? 6_765 1.30 10 1 N A MET 235 ? ? 1_555 C B LEU 8 ? ? 6_765 1.38 11 1 N A GLN 234 ? ? 1_555 C B ARG 7 ? ? 6_765 1.40 12 1 CA B ARG 2 ? ? 1_555 CE B MET 4 ? ? 6_765 1.50 13 1 O A PRO 176 ? ? 1_555 O A HOH 456 ? ? 6_665 1.58 14 1 OE1 A GLN 234 ? ? 1_555 CD2 B PHE 6 ? ? 6_765 1.58 15 1 O A ARG 232 ? ? 1_555 CB B ARG 7 ? ? 6_765 1.59 16 1 NH1 A ARG 27 ? ? 1_555 OG1 A THR 116 ? ? 6_765 1.65 17 1 NE2 A GLN 64 ? ? 1_555 O A HOH 421 ? ? 3_665 1.69 18 1 N A MET 235 ? ? 1_555 CA B LEU 8 ? ? 6_765 1.73 19 1 OE1 A GLN 234 ? ? 1_555 CG B PHE 6 ? ? 6_765 1.77 20 1 CA B ARG 2 ? ? 1_555 SD B MET 4 ? ? 6_765 1.77 21 1 O A ARG 232 ? ? 1_555 CG B ARG 7 ? ? 6_765 1.82 22 1 C B ARG 2 ? ? 1_555 CE B MET 4 ? ? 6_765 1.83 23 1 CZ A ARG 27 ? ? 1_555 OG1 A THR 116 ? ? 6_765 1.83 24 1 CB A GLN 234 ? ? 1_555 O B ARG 7 ? ? 6_765 1.83 25 1 CA A MET 235 ? ? 1_555 O B LEU 8 ? ? 6_765 1.84 26 1 C A GLN 234 ? ? 1_555 O B LEU 8 ? ? 6_765 1.85 27 1 N B ARG 2 ? ? 1_555 SD B MET 4 ? ? 6_765 1.88 28 1 CB A SER 57 ? ? 1_555 O A HOH 430 ? ? 6_765 1.91 29 1 NH1 A ARG 27 ? ? 1_555 CB A THR 116 ? ? 6_765 1.94 30 1 N A SER 57 ? ? 1_555 O A HOH 430 ? ? 6_765 1.94 31 1 NH2 A ARG 27 ? ? 1_555 O A HOH 464 ? ? 6_765 1.99 32 1 OE1 A GLN 234 ? ? 1_555 CB B PHE 6 ? ? 6_765 1.99 33 1 O A GLY 54 ? ? 1_555 OG A SER 226 ? ? 6_765 1.99 34 1 N A GLN 234 ? ? 1_555 N B LEU 8 ? ? 6_765 2.00 35 1 NH2 A ARG 27 ? ? 1_555 OG1 A THR 116 ? ? 6_765 2.02 36 1 CB A ALA 69 ? ? 1_555 NH1 A ARG 232 ? ? 6_765 2.05 37 1 N A LEU 236 ? ? 1_555 O B LEU 8 ? ? 6_765 2.09 38 1 CA A GLN 234 ? ? 1_555 C B ARG 7 ? ? 6_765 2.13 39 1 N A GLY 56 ? ? 1_555 OG A SER 226 ? ? 6_765 2.15 40 1 C A LYS 233 ? ? 1_555 O B ARG 7 ? ? 6_765 2.17 41 1 NE2 A GLN 289 ? ? 1_555 O A HOH 460 ? ? 2_654 2.18 42 1 N B ARG 2 ? ? 1_555 CE B MET 4 ? ? 6_765 2.18 43 1 CB A GLN 234 ? ? 1_555 C B ARG 7 ? ? 6_765 2.18 44 1 C B ARG 2 ? ? 1_555 CG B MET 4 ? ? 6_765 2.18 45 1 C1 A GOL 384 ? ? 1_555 O A HOH 467 ? ? 5_565 2.18 46 1 CB A ALA 69 ? ? 1_555 CZ A ARG 232 ? ? 6_765 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 22 ? ? -119.71 -140.30 2 1 VAL A 119 ? ? 65.41 -62.63 3 1 ASP A 149 ? ? -163.78 41.63 4 1 ASP A 167 ? ? 48.12 82.50 5 1 PHE A 248 ? ? -102.13 73.77 6 1 SER A 250 ? ? 9.94 -125.50 7 1 GLN A 288 ? ? 123.26 153.93 8 1 GLN A 289 ? ? -148.02 -15.21 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MANGANESE (II) ION' MN 4 "ADENOSINE-5'-TRIPHOSPHATE" ATP 5 GLYCEROL GOL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PHK _pdbx_initial_refinement_model.details 'PDB ENTRY 1PHK' #