data_2PNM # _entry.id 2PNM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PNM pdb_00002pnm 10.2210/pdb2pnm/pdb RCSB RCSB042576 ? ? WWPDB D_1000042576 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2GEF 'VP4 protease from another birnavirus (blotched snakehead virus, BSNV)' unspecified PDB 2PNL 'VP4 from IPNV in the space group P1 (acyl-enzyme)' unspecified # _pdbx_database_status.entry_id 2PNM _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-04-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Paetzel, M.' 1 'Lee, J.' 2 'Feldman, A.R.' 3 'Delmas, B.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction. ; J.Biol.Chem. 282 24928 24937 2007 JBCHA3 US 0021-9258 0071 ? 17553791 10.1074/jbc.M701551200 1 ;Purification, crystallization and preliminary X-ray analysis of truncated and mutant forms of VP4 protease from infectious pancreatic necrosis virus. ; 'Acta Crystallogr.,Sect.F' F62 1235 1238 2006 ? DK 1744-3091 ? ? 17142905 10.1107/S1744309106046070 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, J.' 1 ? primary 'Feldman, A.R.' 2 ? primary 'Delmas, B.' 3 ? primary 'Paetzel, M.' 4 ? 1 'Lee, J.' 5 ? 1 'Feldman, A.R.' 6 ? 1 'Chiu, E.' 7 ? 1 'Chan, C.' 8 ? 1 'Kim, Y.-N.' 9 ? 1 'Delmas, B.' 10 ? 1 'Paetzel, M.' 11 ? # _cell.length_a 76.953 _cell.length_b 76.953 _cell.length_c 136.347 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 2PNM _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.entry_id 2PNM _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 178 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protease VP4' 20593.791 1 3.4.21.- K674A 'VP4hex (residues 524-716)' ? 2 water nat water 18.015 159 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;LESANYEEVELPPPSKGVIVPVVHTVKSAPGEAFGSLAIIIPGEYPELLDANQQVLSHFANDTGSVWGIGEDIPFEGDN (MSE)CYTALPLKEIKRNGNIVVEKIFAGPI(MSE)GPSAQLGLSLLVNDIEDGVPR(MSE)VFTGEIADDEETIIPICG VDIAAIAAHEQGLPLIGNQPGVDEEVRNTSLAAHLIQTGTLPVQRA ; _entity_poly.pdbx_seq_one_letter_code_can ;LESANYEEVELPPPSKGVIVPVVHTVKSAPGEAFGSLAIIIPGEYPELLDANQQVLSHFANDTGSVWGIGEDIPFEGDNM CYTALPLKEIKRNGNIVVEKIFAGPIMGPSAQLGLSLLVNDIEDGVPRMVFTGEIADDEETIIPICGVDIAAIAAHEQGL PLIGNQPGVDEEVRNTSLAAHLIQTGTLPVQRA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 GLU n 1 3 SER n 1 4 ALA n 1 5 ASN n 1 6 TYR n 1 7 GLU n 1 8 GLU n 1 9 VAL n 1 10 GLU n 1 11 LEU n 1 12 PRO n 1 13 PRO n 1 14 PRO n 1 15 SER n 1 16 LYS n 1 17 GLY n 1 18 VAL n 1 19 ILE n 1 20 VAL n 1 21 PRO n 1 22 VAL n 1 23 VAL n 1 24 HIS n 1 25 THR n 1 26 VAL n 1 27 LYS n 1 28 SER n 1 29 ALA n 1 30 PRO n 1 31 GLY n 1 32 GLU n 1 33 ALA n 1 34 PHE n 1 35 GLY n 1 36 SER n 1 37 LEU n 1 38 ALA n 1 39 ILE n 1 40 ILE n 1 41 ILE n 1 42 PRO n 1 43 GLY n 1 44 GLU n 1 45 TYR n 1 46 PRO n 1 47 GLU n 1 48 LEU n 1 49 LEU n 1 50 ASP n 1 51 ALA n 1 52 ASN n 1 53 GLN n 1 54 GLN n 1 55 VAL n 1 56 LEU n 1 57 SER n 1 58 HIS n 1 59 PHE n 1 60 ALA n 1 61 ASN n 1 62 ASP n 1 63 THR n 1 64 GLY n 1 65 SER n 1 66 VAL n 1 67 TRP n 1 68 GLY n 1 69 ILE n 1 70 GLY n 1 71 GLU n 1 72 ASP n 1 73 ILE n 1 74 PRO n 1 75 PHE n 1 76 GLU n 1 77 GLY n 1 78 ASP n 1 79 ASN n 1 80 MSE n 1 81 CYS n 1 82 TYR n 1 83 THR n 1 84 ALA n 1 85 LEU n 1 86 PRO n 1 87 LEU n 1 88 LYS n 1 89 GLU n 1 90 ILE n 1 91 LYS n 1 92 ARG n 1 93 ASN n 1 94 GLY n 1 95 ASN n 1 96 ILE n 1 97 VAL n 1 98 VAL n 1 99 GLU n 1 100 LYS n 1 101 ILE n 1 102 PHE n 1 103 ALA n 1 104 GLY n 1 105 PRO n 1 106 ILE n 1 107 MSE n 1 108 GLY n 1 109 PRO n 1 110 SER n 1 111 ALA n 1 112 GLN n 1 113 LEU n 1 114 GLY n 1 115 LEU n 1 116 SER n 1 117 LEU n 1 118 LEU n 1 119 VAL n 1 120 ASN n 1 121 ASP n 1 122 ILE n 1 123 GLU n 1 124 ASP n 1 125 GLY n 1 126 VAL n 1 127 PRO n 1 128 ARG n 1 129 MSE n 1 130 VAL n 1 131 PHE n 1 132 THR n 1 133 GLY n 1 134 GLU n 1 135 ILE n 1 136 ALA n 1 137 ASP n 1 138 ASP n 1 139 GLU n 1 140 GLU n 1 141 THR n 1 142 ILE n 1 143 ILE n 1 144 PRO n 1 145 ILE n 1 146 CYS n 1 147 GLY n 1 148 VAL n 1 149 ASP n 1 150 ILE n 1 151 ALA n 1 152 ALA n 1 153 ILE n 1 154 ALA n 1 155 ALA n 1 156 HIS n 1 157 GLU n 1 158 GLN n 1 159 GLY n 1 160 LEU n 1 161 PRO n 1 162 LEU n 1 163 ILE n 1 164 GLY n 1 165 ASN n 1 166 GLN n 1 167 PRO n 1 168 GLY n 1 169 VAL n 1 170 ASP n 1 171 GLU n 1 172 GLU n 1 173 VAL n 1 174 ARG n 1 175 ASN n 1 176 THR n 1 177 SER n 1 178 LEU n 1 179 ALA n 1 180 ALA n 1 181 HIS n 1 182 LEU n 1 183 ILE n 1 184 GLN n 1 185 THR n 1 186 GLY n 1 187 THR n 1 188 LEU n 1 189 PRO n 1 190 VAL n 1 191 GLN n 1 192 ARG n 1 193 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aquabirnavirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Infectious pancreatic necrosis virus' _entity_src_gen.gene_src_strain 'serotype SP' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Infectious pancreatic necrosis virus - Sp' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11005 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLS_IPNVS _struct_ref.pdbx_db_accession Q703G9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LESANYEEVELPPPSKGVIVPVVHTVKSAPGEAFGSLAIIIPGEYPELLDANQQVLSHFANDTGSVWGIGEDIPFEGDNM CYTALPLKEIKRNGNIVVEKIFAGPIMGPSAQLGLSLLVNDIEDGVPRMVFTGEIADDEETIIPICGVDIKAIAAHEQGL PLIGNQPGVDEEVRNTSLAAHLIQTGTLPVQRA ; _struct_ref.pdbx_align_begin 524 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PNM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 193 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q703G9 _struct_ref_seq.db_align_beg 524 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 716 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 524 _struct_ref_seq.pdbx_auth_seq_align_end 716 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PNM MSE A 80 ? UNP Q703G9 MET 603 'modified residue' 603 1 1 2PNM MSE A 107 ? UNP Q703G9 MET 630 'modified residue' 630 2 1 2PNM MSE A 129 ? UNP Q703G9 MET 652 'modified residue' 652 3 1 2PNM ALA A 151 ? UNP Q703G9 LYS 674 'engineered mutation' 674 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2PNM _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.83 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 56.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M Tris-HCl pH 8.5, 22% PEG 2000 MME, 0.45M Calcium acetate, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-04-23 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X8C' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X8C # _reflns.entry_id 2PNM _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 47.7 _reflns.number_all 11248 _reflns.number_obs 11248 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_netI_over_sigmaI 23.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.186 _reflns_shell.meanI_over_sigI_obs 9.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 11.9 _reflns_shell.number_unique_all 1584 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2PNM _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 25.52 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.840 _refine.ls_number_reflns_obs 11186 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.184 _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.235 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 538 _refine.B_iso_mean 23.945 _refine.aniso_B[1][1] 0.020 _refine.aniso_B[2][2] 0.020 _refine.aniso_B[3][3] -0.030 _refine.aniso_B[1][2] 0.010 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.943 _refine.correlation_coeff_Fo_to_Fc_free 0.912 _refine.pdbx_overall_ESU_R 0.242 _refine.pdbx_overall_ESU_R_Free 0.207 _refine.overall_SU_ML 0.123 _refine.overall_SU_B 9.271 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 11248 _refine.ls_R_factor_all 0.200 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Isotropic _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1337 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 1496 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 25.52 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1367 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1869 1.476 1.983 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 179 5.954 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 39.848 27.368 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 212 14.255 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 1 5.175 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 221 0.100 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1042 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 606 0.214 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 944 0.307 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 145 0.179 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 25 0.220 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 17 0.220 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 927 0.924 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1454 1.434 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 490 2.001 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 415 2.910 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.750 _refine_ls_shell.number_reflns_R_work 750 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.170 _refine_ls_shell.R_factor_R_free 0.234 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 794 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2PNM _struct.title 'Crystal Structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P6122' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PNM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'protease, Ser/Lys dyad, viral protease, hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'This enzymes is a monomer in solution during purification.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 45 ? LEU A 49 ? TYR A 568 LEU A 572 5 ? 5 HELX_P HELX_P2 2 ASP A 50 ? GLN A 54 ? ASP A 573 GLN A 577 5 ? 5 HELX_P HELX_P3 3 ALA A 111 ? ASP A 121 ? ALA A 634 ASP A 644 1 ? 11 HELX_P HELX_P4 4 GLY A 147 ? GLU A 157 ? GLY A 670 GLU A 680 1 ? 11 HELX_P HELX_P5 5 ASN A 175 ? GLY A 186 ? ASN A 698 GLY A 709 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 79 C ? ? ? 1_555 A MSE 80 N ? ? A ASN 602 A MSE 603 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 80 C ? ? ? 1_555 A CYS 81 N ? ? A MSE 603 A CYS 604 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale3 covale both ? A ILE 106 C ? ? ? 1_555 A MSE 107 N ? ? A ILE 629 A MSE 630 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A MSE 107 C ? ? ? 1_555 A GLY 108 N ? ? A MSE 630 A GLY 631 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A ARG 128 C ? ? ? 1_555 A MSE 129 N ? ? A ARG 651 A MSE 652 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale6 covale both ? A MSE 129 C ? ? ? 1_555 A VAL 130 N ? ? A MSE 652 A VAL 653 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel C 1 2 ? parallel C 2 3 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 9 ? LEU A 11 ? VAL A 532 LEU A 534 A 2 ILE A 96 ? VAL A 98 ? ILE A 619 VAL A 621 A 3 MSE A 80 ? ILE A 90 ? MSE A 603 ILE A 613 A 4 PHE A 34 ? PRO A 42 ? PHE A 557 PRO A 565 A 5 VAL A 18 ? HIS A 24 ? VAL A 541 HIS A 547 B 1 VAL A 9 ? LEU A 11 ? VAL A 532 LEU A 534 B 2 ILE A 96 ? VAL A 98 ? ILE A 619 VAL A 621 B 3 MSE A 80 ? ILE A 90 ? MSE A 603 ILE A 613 B 4 GLY A 64 ? TRP A 67 ? GLY A 587 TRP A 590 B 5 LEU A 56 ? ALA A 60 ? LEU A 579 ALA A 583 B 6 ILE A 73 ? GLU A 76 ? ILE A 596 GLU A 599 C 1 VAL A 130 ? PHE A 131 ? VAL A 653 PHE A 654 C 2 LEU A 162 ? GLY A 164 ? LEU A 685 GLY A 687 C 3 GLU A 171 ? GLU A 172 ? GLU A 694 GLU A 695 D 1 GLU A 134 ? ILE A 135 ? GLU A 657 ILE A 658 D 2 ILE A 142 ? ILE A 143 ? ILE A 665 ILE A 666 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 11 ? N LEU A 534 O ILE A 96 ? O ILE A 619 A 2 3 O VAL A 97 ? O VAL A 620 N GLU A 89 ? N GLU A 612 A 3 4 O LEU A 85 ? O LEU A 608 N ILE A 39 ? N ILE A 562 A 4 5 O PHE A 34 ? O PHE A 557 N HIS A 24 ? N HIS A 547 B 1 2 N LEU A 11 ? N LEU A 534 O ILE A 96 ? O ILE A 619 B 2 3 O VAL A 97 ? O VAL A 620 N GLU A 89 ? N GLU A 612 B 3 4 O ALA A 84 ? O ALA A 607 N TRP A 67 ? N TRP A 590 B 4 5 O VAL A 66 ? O VAL A 589 N SER A 57 ? N SER A 580 B 5 6 N HIS A 58 ? N HIS A 581 O ILE A 73 ? O ILE A 596 C 1 2 N VAL A 130 ? N VAL A 653 O ILE A 163 ? O ILE A 686 C 2 3 N GLY A 164 ? N GLY A 687 O GLU A 171 ? O GLU A 694 D 1 2 N GLU A 134 ? N GLU A 657 O ILE A 143 ? O ILE A 666 # _atom_sites.entry_id 2PNM _atom_sites.fract_transf_matrix[1][1] 0.012995 _atom_sites.fract_transf_matrix[1][2] 0.007503 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015005 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007334 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 524 524 LEU LEU A . n A 1 2 GLU 2 525 525 GLU GLU A . n A 1 3 SER 3 526 526 SER SER A . n A 1 4 ALA 4 527 527 ALA ALA A . n A 1 5 ASN 5 528 528 ASN ASN A . n A 1 6 TYR 6 529 529 TYR TYR A . n A 1 7 GLU 7 530 530 GLU GLU A . n A 1 8 GLU 8 531 531 GLU GLU A . n A 1 9 VAL 9 532 532 VAL VAL A . n A 1 10 GLU 10 533 533 GLU GLU A . n A 1 11 LEU 11 534 534 LEU LEU A . n A 1 12 PRO 12 535 535 PRO PRO A . n A 1 13 PRO 13 536 536 PRO PRO A . n A 1 14 PRO 14 537 537 PRO PRO A . n A 1 15 SER 15 538 538 SER SER A . n A 1 16 LYS 16 539 539 LYS LYS A . n A 1 17 GLY 17 540 540 GLY GLY A . n A 1 18 VAL 18 541 541 VAL VAL A . n A 1 19 ILE 19 542 542 ILE ILE A . n A 1 20 VAL 20 543 543 VAL VAL A . n A 1 21 PRO 21 544 544 PRO PRO A . n A 1 22 VAL 22 545 545 VAL VAL A . n A 1 23 VAL 23 546 546 VAL VAL A . n A 1 24 HIS 24 547 547 HIS HIS A . n A 1 25 THR 25 548 ? ? ? A . n A 1 26 VAL 26 549 ? ? ? A . n A 1 27 LYS 27 550 ? ? ? A . n A 1 28 SER 28 551 ? ? ? A . n A 1 29 ALA 29 552 ? ? ? A . n A 1 30 PRO 30 553 ? ? ? A . n A 1 31 GLY 31 554 ? ? ? A . n A 1 32 GLU 32 555 555 GLU GLU A . n A 1 33 ALA 33 556 556 ALA ALA A . n A 1 34 PHE 34 557 557 PHE PHE A . n A 1 35 GLY 35 558 558 GLY GLY A . n A 1 36 SER 36 559 559 SER SER A . n A 1 37 LEU 37 560 560 LEU LEU A . n A 1 38 ALA 38 561 561 ALA ALA A . n A 1 39 ILE 39 562 562 ILE ILE A . n A 1 40 ILE 40 563 563 ILE ILE A . n A 1 41 ILE 41 564 564 ILE ILE A . n A 1 42 PRO 42 565 565 PRO PRO A . n A 1 43 GLY 43 566 566 GLY GLY A . n A 1 44 GLU 44 567 567 GLU GLU A . n A 1 45 TYR 45 568 568 TYR TYR A . n A 1 46 PRO 46 569 569 PRO PRO A . n A 1 47 GLU 47 570 570 GLU GLU A . n A 1 48 LEU 48 571 571 LEU LEU A . n A 1 49 LEU 49 572 572 LEU LEU A . n A 1 50 ASP 50 573 573 ASP ASP A . n A 1 51 ALA 51 574 574 ALA ALA A . n A 1 52 ASN 52 575 575 ASN ASN A . n A 1 53 GLN 53 576 576 GLN GLN A . n A 1 54 GLN 54 577 577 GLN GLN A . n A 1 55 VAL 55 578 578 VAL VAL A . n A 1 56 LEU 56 579 579 LEU LEU A . n A 1 57 SER 57 580 580 SER SER A . n A 1 58 HIS 58 581 581 HIS HIS A . n A 1 59 PHE 59 582 582 PHE PHE A . n A 1 60 ALA 60 583 583 ALA ALA A . n A 1 61 ASN 61 584 584 ASN ASN A . n A 1 62 ASP 62 585 585 ASP ASP A . n A 1 63 THR 63 586 586 THR THR A . n A 1 64 GLY 64 587 587 GLY GLY A . n A 1 65 SER 65 588 588 SER SER A . n A 1 66 VAL 66 589 589 VAL VAL A . n A 1 67 TRP 67 590 590 TRP TRP A . n A 1 68 GLY 68 591 591 GLY GLY A . n A 1 69 ILE 69 592 592 ILE ILE A . n A 1 70 GLY 70 593 593 GLY GLY A . n A 1 71 GLU 71 594 594 GLU GLU A . n A 1 72 ASP 72 595 595 ASP ASP A . n A 1 73 ILE 73 596 596 ILE ILE A . n A 1 74 PRO 74 597 597 PRO PRO A . n A 1 75 PHE 75 598 598 PHE PHE A . n A 1 76 GLU 76 599 599 GLU GLU A . n A 1 77 GLY 77 600 600 GLY GLY A . n A 1 78 ASP 78 601 601 ASP ASP A . n A 1 79 ASN 79 602 602 ASN ASN A . n A 1 80 MSE 80 603 603 MSE MSE A . n A 1 81 CYS 81 604 604 CYS CYS A . n A 1 82 TYR 82 605 605 TYR TYR A . n A 1 83 THR 83 606 606 THR THR A . n A 1 84 ALA 84 607 607 ALA ALA A . n A 1 85 LEU 85 608 608 LEU LEU A . n A 1 86 PRO 86 609 609 PRO PRO A . n A 1 87 LEU 87 610 610 LEU LEU A . n A 1 88 LYS 88 611 611 LYS LYS A . n A 1 89 GLU 89 612 612 GLU GLU A . n A 1 90 ILE 90 613 613 ILE ILE A . n A 1 91 LYS 91 614 614 LYS LYS A . n A 1 92 ARG 92 615 615 ARG ALA A . n A 1 93 ASN 93 616 616 ASN ASN A . n A 1 94 GLY 94 617 617 GLY GLY A . n A 1 95 ASN 95 618 618 ASN ASN A . n A 1 96 ILE 96 619 619 ILE ILE A . n A 1 97 VAL 97 620 620 VAL VAL A . n A 1 98 VAL 98 621 621 VAL VAL A . n A 1 99 GLU 99 622 622 GLU GLU A . n A 1 100 LYS 100 623 623 LYS LYS A . n A 1 101 ILE 101 624 624 ILE ILE A . n A 1 102 PHE 102 625 625 PHE PHE A . n A 1 103 ALA 103 626 626 ALA ALA A . n A 1 104 GLY 104 627 627 GLY GLY A . n A 1 105 PRO 105 628 628 PRO PRO A . n A 1 106 ILE 106 629 629 ILE ILE A . n A 1 107 MSE 107 630 630 MSE MSE A . n A 1 108 GLY 108 631 631 GLY GLY A . n A 1 109 PRO 109 632 632 PRO PRO A . n A 1 110 SER 110 633 633 SER SER A . n A 1 111 ALA 111 634 634 ALA ALA A . n A 1 112 GLN 112 635 635 GLN GLN A . n A 1 113 LEU 113 636 636 LEU LEU A . n A 1 114 GLY 114 637 637 GLY GLY A . n A 1 115 LEU 115 638 638 LEU LEU A . n A 1 116 SER 116 639 639 SER SER A . n A 1 117 LEU 117 640 640 LEU LEU A . n A 1 118 LEU 118 641 641 LEU LEU A . n A 1 119 VAL 119 642 642 VAL VAL A . n A 1 120 ASN 120 643 643 ASN ASN A . n A 1 121 ASP 121 644 644 ASP ASP A . n A 1 122 ILE 122 645 645 ILE ILE A . n A 1 123 GLU 123 646 646 GLU GLU A . n A 1 124 ASP 124 647 647 ASP ASP A . n A 1 125 GLY 125 648 648 GLY GLY A . n A 1 126 VAL 126 649 649 VAL VAL A . n A 1 127 PRO 127 650 650 PRO PRO A . n A 1 128 ARG 128 651 651 ARG ARG A . n A 1 129 MSE 129 652 652 MSE MSE A . n A 1 130 VAL 130 653 653 VAL VAL A . n A 1 131 PHE 131 654 654 PHE PHE A . n A 1 132 THR 132 655 655 THR THR A . n A 1 133 GLY 133 656 656 GLY GLY A . n A 1 134 GLU 134 657 657 GLU GLU A . n A 1 135 ILE 135 658 658 ILE ILE A . n A 1 136 ALA 136 659 659 ALA ALA A . n A 1 137 ASP 137 660 660 ASP ASP A . n A 1 138 ASP 138 661 661 ASP ASP A . n A 1 139 GLU 139 662 662 GLU GLU A . n A 1 140 GLU 140 663 663 GLU GLU A . n A 1 141 THR 141 664 664 THR THR A . n A 1 142 ILE 142 665 665 ILE ILE A . n A 1 143 ILE 143 666 666 ILE ILE A . n A 1 144 PRO 144 667 667 PRO PRO A . n A 1 145 ILE 145 668 668 ILE ILE A . n A 1 146 CYS 146 669 669 CYS CYS A . n A 1 147 GLY 147 670 670 GLY GLY A . n A 1 148 VAL 148 671 671 VAL VAL A . n A 1 149 ASP 149 672 672 ASP ASP A . n A 1 150 ILE 150 673 673 ILE ILE A . n A 1 151 ALA 151 674 674 ALA ALA A . n A 1 152 ALA 152 675 675 ALA ALA A . n A 1 153 ILE 153 676 676 ILE ILE A . n A 1 154 ALA 154 677 677 ALA ALA A . n A 1 155 ALA 155 678 678 ALA ALA A . n A 1 156 HIS 156 679 679 HIS HIS A . n A 1 157 GLU 157 680 680 GLU GLU A . n A 1 158 GLN 158 681 681 GLN GLN A . n A 1 159 GLY 159 682 682 GLY GLY A . n A 1 160 LEU 160 683 683 LEU LEU A . n A 1 161 PRO 161 684 684 PRO PRO A . n A 1 162 LEU 162 685 685 LEU LEU A . n A 1 163 ILE 163 686 686 ILE ILE A . n A 1 164 GLY 164 687 687 GLY GLY A . n A 1 165 ASN 165 688 688 ASN ASN A . n A 1 166 GLN 166 689 689 GLN GLN A . n A 1 167 PRO 167 690 690 PRO PRO A . n A 1 168 GLY 168 691 691 GLY GLY A . n A 1 169 VAL 169 692 692 VAL VAL A . n A 1 170 ASP 170 693 693 ASP ASP A . n A 1 171 GLU 171 694 694 GLU GLU A . n A 1 172 GLU 172 695 695 GLU GLU A . n A 1 173 VAL 173 696 696 VAL VAL A . n A 1 174 ARG 174 697 697 ARG ALA A . n A 1 175 ASN 175 698 698 ASN ASN A . n A 1 176 THR 176 699 699 THR THR A . n A 1 177 SER 177 700 700 SER SER A . n A 1 178 LEU 178 701 701 LEU LEU A . n A 1 179 ALA 179 702 702 ALA ALA A . n A 1 180 ALA 180 703 703 ALA ALA A . n A 1 181 HIS 181 704 704 HIS HIS A . n A 1 182 LEU 182 705 705 LEU LEU A . n A 1 183 ILE 183 706 706 ILE ILE A . n A 1 184 GLN 184 707 707 GLN GLN A . n A 1 185 THR 185 708 708 THR THR A . n A 1 186 GLY 186 709 709 GLY GLY A . n A 1 187 THR 187 710 710 THR THR A . n A 1 188 LEU 188 711 711 LEU LEU A . n A 1 189 PRO 189 712 ? ? ? A . n A 1 190 VAL 190 713 ? ? ? A . n A 1 191 GLN 191 714 ? ? ? A . n A 1 192 ARG 192 715 ? ? ? A . n A 1 193 ALA 193 716 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 717 1 HOH HOH A . B 2 HOH 2 718 2 HOH HOH A . B 2 HOH 3 719 3 HOH HOH A . B 2 HOH 4 720 4 HOH HOH A . B 2 HOH 5 721 5 HOH HOH A . B 2 HOH 6 722 6 HOH HOH A . B 2 HOH 7 723 7 HOH HOH A . B 2 HOH 8 724 8 HOH HOH A . B 2 HOH 9 725 9 HOH HOH A . B 2 HOH 10 726 10 HOH HOH A . B 2 HOH 11 727 11 HOH HOH A . B 2 HOH 12 728 12 HOH HOH A . B 2 HOH 13 729 13 HOH HOH A . B 2 HOH 14 730 14 HOH HOH A . B 2 HOH 15 731 15 HOH HOH A . B 2 HOH 16 732 16 HOH HOH A . B 2 HOH 17 733 17 HOH HOH A . B 2 HOH 18 734 18 HOH HOH A . B 2 HOH 19 735 19 HOH HOH A . B 2 HOH 20 736 20 HOH HOH A . B 2 HOH 21 737 21 HOH HOH A . B 2 HOH 22 738 22 HOH HOH A . B 2 HOH 23 739 23 HOH HOH A . B 2 HOH 24 740 24 HOH HOH A . B 2 HOH 25 741 25 HOH HOH A . B 2 HOH 26 742 26 HOH HOH A . B 2 HOH 27 743 27 HOH HOH A . B 2 HOH 28 744 28 HOH HOH A . B 2 HOH 29 745 29 HOH HOH A . B 2 HOH 30 746 30 HOH HOH A . B 2 HOH 31 747 31 HOH HOH A . B 2 HOH 32 748 32 HOH HOH A . B 2 HOH 33 749 33 HOH HOH A . B 2 HOH 34 750 34 HOH HOH A . B 2 HOH 35 751 35 HOH HOH A . B 2 HOH 36 752 36 HOH HOH A . B 2 HOH 37 753 37 HOH HOH A . B 2 HOH 38 754 38 HOH HOH A . B 2 HOH 39 755 39 HOH HOH A . B 2 HOH 40 756 40 HOH HOH A . B 2 HOH 41 757 41 HOH HOH A . B 2 HOH 42 758 42 HOH HOH A . B 2 HOH 43 759 43 HOH HOH A . B 2 HOH 44 760 44 HOH HOH A . B 2 HOH 45 761 45 HOH HOH A . B 2 HOH 46 762 46 HOH HOH A . B 2 HOH 47 763 47 HOH HOH A . B 2 HOH 48 764 48 HOH HOH A . B 2 HOH 49 765 49 HOH HOH A . B 2 HOH 50 766 50 HOH HOH A . B 2 HOH 51 767 51 HOH HOH A . B 2 HOH 52 768 52 HOH HOH A . B 2 HOH 53 769 53 HOH HOH A . B 2 HOH 54 770 54 HOH HOH A . B 2 HOH 55 771 55 HOH HOH A . B 2 HOH 56 772 56 HOH HOH A . B 2 HOH 57 773 57 HOH HOH A . B 2 HOH 58 774 58 HOH HOH A . B 2 HOH 59 775 59 HOH HOH A . B 2 HOH 60 776 60 HOH HOH A . B 2 HOH 61 777 61 HOH HOH A . B 2 HOH 62 778 62 HOH HOH A . B 2 HOH 63 779 63 HOH HOH A . B 2 HOH 64 780 64 HOH HOH A . B 2 HOH 65 781 65 HOH HOH A . B 2 HOH 66 782 66 HOH HOH A . B 2 HOH 67 783 67 HOH HOH A . B 2 HOH 68 784 68 HOH HOH A . B 2 HOH 69 785 69 HOH HOH A . B 2 HOH 70 786 70 HOH HOH A . B 2 HOH 71 787 71 HOH HOH A . B 2 HOH 72 788 72 HOH HOH A . B 2 HOH 73 789 73 HOH HOH A . B 2 HOH 74 790 74 HOH HOH A . B 2 HOH 75 791 75 HOH HOH A . B 2 HOH 76 792 76 HOH HOH A . B 2 HOH 77 793 77 HOH HOH A . B 2 HOH 78 794 78 HOH HOH A . B 2 HOH 79 795 79 HOH HOH A . B 2 HOH 80 796 80 HOH HOH A . B 2 HOH 81 797 81 HOH HOH A . B 2 HOH 82 798 82 HOH HOH A . B 2 HOH 83 799 83 HOH HOH A . B 2 HOH 84 800 84 HOH HOH A . B 2 HOH 85 801 85 HOH HOH A . B 2 HOH 86 802 86 HOH HOH A . B 2 HOH 87 803 87 HOH HOH A . B 2 HOH 88 804 88 HOH HOH A . B 2 HOH 89 805 89 HOH HOH A . B 2 HOH 90 806 90 HOH HOH A . B 2 HOH 91 807 91 HOH HOH A . B 2 HOH 92 808 92 HOH HOH A . B 2 HOH 93 809 93 HOH HOH A . B 2 HOH 94 810 94 HOH HOH A . B 2 HOH 95 811 95 HOH HOH A . B 2 HOH 96 812 96 HOH HOH A . B 2 HOH 97 813 97 HOH HOH A . B 2 HOH 98 814 98 HOH HOH A . B 2 HOH 99 815 99 HOH HOH A . B 2 HOH 100 816 100 HOH HOH A . B 2 HOH 101 817 101 HOH HOH A . B 2 HOH 102 818 102 HOH HOH A . B 2 HOH 103 819 103 HOH HOH A . B 2 HOH 104 820 104 HOH HOH A . B 2 HOH 105 821 105 HOH HOH A . B 2 HOH 106 822 106 HOH HOH A . B 2 HOH 107 823 107 HOH HOH A . B 2 HOH 108 824 108 HOH HOH A . B 2 HOH 109 825 109 HOH HOH A . B 2 HOH 110 826 110 HOH HOH A . B 2 HOH 111 827 111 HOH HOH A . B 2 HOH 112 828 112 HOH HOH A . B 2 HOH 113 829 113 HOH HOH A . B 2 HOH 114 830 114 HOH HOH A . B 2 HOH 115 831 115 HOH HOH A . B 2 HOH 116 832 116 HOH HOH A . B 2 HOH 117 833 117 HOH HOH A . B 2 HOH 118 834 118 HOH HOH A . B 2 HOH 119 835 119 HOH HOH A . B 2 HOH 120 836 120 HOH HOH A . B 2 HOH 121 837 121 HOH HOH A . B 2 HOH 122 838 122 HOH HOH A . B 2 HOH 123 839 123 HOH HOH A . B 2 HOH 124 840 124 HOH HOH A . B 2 HOH 125 841 125 HOH HOH A . B 2 HOH 126 842 126 HOH HOH A . B 2 HOH 127 843 127 HOH HOH A . B 2 HOH 128 844 128 HOH HOH A . B 2 HOH 129 845 129 HOH HOH A . B 2 HOH 130 846 130 HOH HOH A . B 2 HOH 131 847 131 HOH HOH A . B 2 HOH 132 848 132 HOH HOH A . B 2 HOH 133 849 133 HOH HOH A . B 2 HOH 134 850 134 HOH HOH A . B 2 HOH 135 851 135 HOH HOH A . B 2 HOH 136 852 136 HOH HOH A . B 2 HOH 137 853 137 HOH HOH A . B 2 HOH 138 854 138 HOH HOH A . B 2 HOH 139 855 139 HOH HOH A . B 2 HOH 140 856 140 HOH HOH A . B 2 HOH 141 857 141 HOH HOH A . B 2 HOH 142 858 142 HOH HOH A . B 2 HOH 143 859 143 HOH HOH A . B 2 HOH 144 860 144 HOH HOH A . B 2 HOH 145 861 145 HOH HOH A . B 2 HOH 146 862 146 HOH HOH A . B 2 HOH 147 863 147 HOH HOH A . B 2 HOH 148 864 148 HOH HOH A . B 2 HOH 149 865 149 HOH HOH A . B 2 HOH 150 866 150 HOH HOH A . B 2 HOH 151 867 151 HOH HOH A . B 2 HOH 152 868 152 HOH HOH A . B 2 HOH 153 869 153 HOH HOH A . B 2 HOH 154 870 154 HOH HOH A . B 2 HOH 155 871 155 HOH HOH A . B 2 HOH 156 872 156 HOH HOH A . B 2 HOH 157 873 157 HOH HOH A . B 2 HOH 158 874 158 HOH HOH A . B 2 HOH 159 875 159 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 80 A MSE 603 ? MET SELENOMETHIONINE 2 A MSE 107 A MSE 630 ? MET SELENOMETHIONINE 3 A MSE 129 A MSE 652 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-05 2 'Structure model' 1 1 2007-10-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 21.1153 -10.9250 -4.3224 0.0335 0.1495 0.2112 0.0847 -0.0650 0.0495 10.4332 6.0134 59.9802 -0.9068 19.1667 -13.7902 0.4810 -2.5608 2.0798 1.9647 -0.0633 -1.8074 0.2684 0.7832 3.5542 'X-RAY DIFFRACTION' 2 ? refined 6.3221 -15.6809 -9.9954 0.0508 0.0215 0.0490 0.0037 -0.0350 -0.0026 2.3896 2.8574 2.4443 1.7772 0.7575 -1.0352 0.1001 0.0027 -0.1028 -0.0105 0.0116 -0.0275 0.1565 0.0201 0.0445 'X-RAY DIFFRACTION' 3 ? refined 1.1988 -16.2132 7.9786 0.4876 0.2179 -0.0821 -0.4497 0.0037 0.0425 21.5356 10.5080 70.8178 1.5667 11.7471 26.7290 0.3417 -0.9614 0.6197 -1.4330 1.1332 0.0476 1.1197 -3.7158 1.1746 'X-RAY DIFFRACTION' 4 ? refined 8.0194 -20.9752 -7.9427 0.0806 0.0022 0.0386 -0.0323 -0.0750 -0.0184 8.0595 1.5605 7.4804 0.9780 -3.3920 -0.1851 0.2814 0.0966 -0.3780 -0.2098 -0.3623 -0.2622 -0.0563 0.3771 0.2344 'X-RAY DIFFRACTION' 5 ? refined 16.2330 -16.0001 -5.9110 0.0233 0.0166 0.0163 0.0090 -0.0431 -0.0650 7.9079 10.1286 15.1535 3.2007 6.5021 6.4649 0.0976 0.5139 -0.6114 0.7854 -0.1886 -0.2051 -0.5469 -0.1506 1.1165 'X-RAY DIFFRACTION' 6 ? refined 15.4114 -27.9351 -2.6099 0.1384 -0.0539 0.1190 0.0878 -0.1945 -0.0671 2.2408 4.0574 3.9762 2.8782 2.1089 1.8614 0.3713 0.2165 -0.5878 0.0955 -0.6261 -0.4004 0.3347 0.8631 0.5275 'X-RAY DIFFRACTION' 7 ? refined 11.0429 -35.9201 -6.4777 0.2533 -0.1646 0.1496 0.0739 -0.2735 -0.0952 0.2742 6.8589 7.5169 -0.2491 1.2726 -4.4238 0.4205 0.3691 -0.7896 0.2228 -0.6434 -0.3180 0.2006 1.2348 0.1234 'X-RAY DIFFRACTION' 8 ? refined 10.2576 -22.1995 -8.4629 0.0691 0.0218 0.0693 0.0027 -0.0471 -0.0114 11.5063 10.9494 2.5014 -2.8442 5.3630 -1.1927 0.5030 -0.0522 -0.4508 0.7434 -0.4375 -0.6154 -0.5226 0.2525 0.3035 'X-RAY DIFFRACTION' 9 ? refined 0.3128 -10.9620 -13.2234 -0.0120 -0.0281 0.0615 0.0025 -0.0213 0.0209 4.3932 3.5074 20.6267 2.1386 7.8081 -0.2788 -0.1789 0.0876 0.0913 0.1087 0.2684 0.3391 0.0105 -0.3520 -0.2119 'X-RAY DIFFRACTION' 10 ? refined 8.7852 -11.5491 -2.9362 0.0140 -0.0047 0.0826 -0.0319 -0.0360 0.0013 4.2008 0.1763 20.5215 -0.0712 8.6935 0.5183 0.0901 0.1242 -0.2143 -0.1353 -0.0152 0.0515 0.1059 -0.0443 -0.3097 'X-RAY DIFFRACTION' 11 ? refined 7.4994 -25.2787 3.6909 0.2005 -0.0534 0.0098 -0.0807 -0.1690 0.0574 1.6482 2.8418 1.2529 -0.1884 0.4285 0.8671 0.7128 -0.3595 -0.3533 -0.5875 -0.2482 0.0751 0.5985 1.0652 -0.2901 'X-RAY DIFFRACTION' 12 ? refined 2.9733 -32.2240 -9.0907 0.1879 -0.0902 0.1090 -0.0532 -0.1793 0.0268 3.6338 3.2545 7.0625 1.1498 1.1961 2.8027 0.1913 0.0719 -0.2632 0.2187 -0.7651 -0.1353 0.0102 0.8220 -0.0926 'X-RAY DIFFRACTION' 13 ? refined -0.7621 -24.1751 -16.0097 0.1597 0.0716 0.0452 -0.0780 -0.1093 0.0298 28.9802 9.3094 15.2791 -8.1801 -6.4585 2.3266 -0.0210 -0.2044 0.2254 1.3867 -0.4489 0.1593 -0.3337 0.9058 -0.3391 'X-RAY DIFFRACTION' 14 ? refined -1.8673 -30.1760 -2.5554 0.2342 -0.0115 -0.0231 -0.1834 -0.1283 0.0802 2.2150 1.6708 2.3832 0.2231 0.8787 1.9198 0.5006 -0.1219 -0.3786 -0.4407 -0.4744 0.1565 0.5837 0.8075 -0.4158 'X-RAY DIFFRACTION' 15 ? refined -1.9529 -36.1388 1.2816 0.3068 -0.1029 0.0433 -0.2748 -0.2624 0.1631 7.4756 13.6330 9.6195 -7.2353 -3.4130 2.6076 0.2075 0.3894 -0.5968 -0.7762 -1.0556 0.0635 0.8189 1.5263 0.0577 'X-RAY DIFFRACTION' 16 ? refined -6.9860 -18.4331 2.5434 0.0568 0.2044 -0.0619 -0.1606 0.0442 0.0142 3.8597 13.5516 1.6395 -5.8557 2.3130 -4.5968 0.5263 -0.1090 -0.4173 -0.6711 -0.0271 0.6112 1.0681 -0.0408 -0.8693 'X-RAY DIFFRACTION' 17 ? refined -6.8078 -17.3037 -4.3581 0.0060 0.1162 -0.0310 -0.0442 0.0118 0.0185 14.0194 10.4409 3.3300 6.6928 0.5778 -4.6187 0.0552 0.0182 -0.0734 -0.1556 0.5542 0.3365 0.4880 -0.1288 -0.6572 'X-RAY DIFFRACTION' 18 ? refined -10.0336 -28.5177 0.5611 0.1096 0.1527 -0.0105 -0.2543 -0.0130 0.0784 1.1385 4.7595 3.8997 0.8885 1.4605 -1.7303 0.5289 0.0106 -0.5395 -0.4723 -0.3559 0.5677 0.3668 0.7695 -1.0494 'X-RAY DIFFRACTION' 19 ? refined -8.8069 -33.8536 -7.9715 0.1199 -0.0361 0.1090 -0.2286 -0.1875 0.1034 6.1249 7.3558 6.9028 -1.7067 3.3257 0.5456 0.7375 -0.1648 -0.5728 -0.6140 -0.5638 0.7543 0.0094 0.5926 -0.8481 'X-RAY DIFFRACTION' 20 ? refined -10.9331 -26.7777 -14.0120 0.0727 0.0094 -0.0570 -0.1911 -0.1038 0.0714 16.0323 22.7602 22.8647 1.0525 12.8750 -2.2856 0.1082 -0.1164 0.0083 -0.2069 0.8279 0.2992 0.2932 0.2567 -1.6994 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 5 ALL A 524 A 528 'X-RAY DIFFRACTION' ? 2 2 A 6 A 22 ALL A 529 A 545 'X-RAY DIFFRACTION' ? 3 3 A 23 A 35 ALL A 546 A 558 'X-RAY DIFFRACTION' ? 4 4 A 36 A 44 ALL A 559 A 567 'X-RAY DIFFRACTION' ? 5 5 A 45 A 50 ALL A 568 A 573 'X-RAY DIFFRACTION' ? 6 6 A 51 A 71 ALL A 574 A 594 'X-RAY DIFFRACTION' ? 7 7 A 72 A 79 ALL A 595 A 602 'X-RAY DIFFRACTION' ? 8 8 A 80 A 87 ALL A 603 A 610 'X-RAY DIFFRACTION' ? 9 9 A 88 A 95 ALL A 611 A 618 'X-RAY DIFFRACTION' ? 10 10 A 96 A 102 ALL A 619 A 625 'X-RAY DIFFRACTION' ? 11 11 A 103 A 111 ALL A 626 A 634 'X-RAY DIFFRACTION' ? 12 12 A 112 A 122 ALL A 635 A 645 'X-RAY DIFFRACTION' ? 13 13 A 123 A 128 ALL A 646 A 651 'X-RAY DIFFRACTION' ? 14 14 A 129 A 136 ALL A 652 A 659 'X-RAY DIFFRACTION' ? 15 15 A 137 A 148 ALL A 660 A 671 'X-RAY DIFFRACTION' ? 16 16 A 149 A 156 ALL A 672 A 679 'X-RAY DIFFRACTION' ? 17 17 A 157 A 162 ALL A 680 A 685 'X-RAY DIFFRACTION' ? 18 18 A 163 A 170 ALL A 686 A 693 'X-RAY DIFFRACTION' ? 19 19 A 171 A 182 ALL A 694 A 705 'X-RAY DIFFRACTION' ? 20 20 A 183 A 188 ALL A 706 A 711 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 5 SHARP . ? ? ? ? phasing ? ? ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 778 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 820 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.05 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 556 ? ? -47.64 156.66 2 1 GLU A 612 ? ? -172.83 148.76 3 1 GLU A 663 ? ? -142.67 -43.57 4 1 THR A 710 ? ? -140.31 -152.60 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 555 ? CG ? A GLU 32 CG 2 1 Y 1 A GLU 555 ? CD ? A GLU 32 CD 3 1 Y 1 A GLU 555 ? OE1 ? A GLU 32 OE1 4 1 Y 1 A GLU 555 ? OE2 ? A GLU 32 OE2 5 1 Y 1 A ARG 615 ? CG ? A ARG 92 CG 6 1 Y 1 A ARG 615 ? CD ? A ARG 92 CD 7 1 Y 1 A ARG 615 ? NE ? A ARG 92 NE 8 1 Y 1 A ARG 615 ? CZ ? A ARG 92 CZ 9 1 Y 1 A ARG 615 ? NH1 ? A ARG 92 NH1 10 1 Y 1 A ARG 615 ? NH2 ? A ARG 92 NH2 11 1 Y 1 A ARG 697 ? CG ? A ARG 174 CG 12 1 Y 1 A ARG 697 ? CD ? A ARG 174 CD 13 1 Y 1 A ARG 697 ? NE ? A ARG 174 NE 14 1 Y 1 A ARG 697 ? CZ ? A ARG 174 CZ 15 1 Y 1 A ARG 697 ? NH1 ? A ARG 174 NH1 16 1 Y 1 A ARG 697 ? NH2 ? A ARG 174 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 548 ? A THR 25 2 1 Y 1 A VAL 549 ? A VAL 26 3 1 Y 1 A LYS 550 ? A LYS 27 4 1 Y 1 A SER 551 ? A SER 28 5 1 Y 1 A ALA 552 ? A ALA 29 6 1 Y 1 A PRO 553 ? A PRO 30 7 1 Y 1 A GLY 554 ? A GLY 31 8 1 Y 1 A PRO 712 ? A PRO 189 9 1 Y 1 A VAL 713 ? A VAL 190 10 1 Y 1 A GLN 714 ? A GLN 191 11 1 Y 1 A ARG 715 ? A ARG 192 12 1 Y 1 A ALA 716 ? A ALA 193 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #