data_2R3W # _entry.id 2R3W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2R3W pdb_00002r3w 10.2210/pdb2r3w/pdb RCSB RCSB044392 ? ? WWPDB D_1000044392 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2R38 'I84V HIV-1 protease in complex with a carbamoyl decorated pyrrolidine-based inhibitor' unspecified PDB 2R3T 'I50V HIV-1 protease in complex with a carbamoyl decorated pyrrolidine-based inhibitor' unspecified PDB 2R43 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2R3W _pdbx_database_status.recvd_initial_deposition_date 2007-08-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Boettcher, J.' 1 'Blum, A.' 2 'Heine, A.' 3 'Diederich, W.E.' 4 'Klebe, G.' 5 # _citation.id primary _citation.title 'Structural and Kinetic Analysis of Pyrrolidine-Based Inhibitors of the Drug-Resistant Ile84Val Mutant of HIV-1 Protease' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 383 _citation.page_first 347 _citation.page_last 357 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18692068 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.07.062 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bottcher, J.' 1 ? primary 'Blum, A.' 2 ? primary 'Heine, A.' 3 ? primary 'Diederich, W.E.' 4 ? primary 'Klebe, G.' 5 ? # _cell.entry_id 2R3W _cell.length_a 57.336 _cell.length_b 85.763 _cell.length_c 46.560 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2R3W _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Protease 10789.729 2 3.4.23.16 I84V ? ? 2 non-polymer syn "N,N'-(3S,4S)-PYRROLIDINE-3,4-DIYLBIS(4-AMINO-N-BENZYLBENZENESULFONAMIDE)" 591.744 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 108 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNVIGRNLLTQIGCTLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNVIGRNLLTQIGCTLNF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 GLN n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 LEU n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 LEU n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 CYS n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 VAL n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 CYS n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain gag-pol _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(D3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name peT11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5RZ08_9HIV1 _struct_ref.pdbx_db_accession Q5RZ08 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2R3W A 1 ? 99 ? Q5RZ08 1 ? 99 ? 1 99 2 1 2R3W B 1 ? 99 ? Q5RZ08 1 ? 99 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2R3W VAL A 84 ? UNP Q5RZ08 ILE 84 'engineered mutation' 84 1 2 2R3W VAL B 84 ? UNP Q5RZ08 ILE 84 'engineered mutation' 84 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G3G non-polymer . "N,N'-(3S,4S)-PYRROLIDINE-3,4-DIYLBIS(4-AMINO-N-BENZYLBENZENESULFONAMIDE)" ? 'C30 H33 N5 O4 S2' 591.744 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2R3W _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.652382 _exptl_crystal.density_percent_sol 53.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '2.5M NaCl, 0.1M Bis-Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2006-06-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator mirror _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2R3W _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.92 _reflns.d_resolution_low 25 _reflns.number_all ? _reflns.number_obs 17926 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value 0.091 _reflns.pdbx_netI_over_sigmaI 15.8 _reflns.B_iso_Wilson_estimate 22.0 _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.92 _reflns_shell.d_res_low 1.95 _reflns_shell.percent_possible_all 97.0 _reflns_shell.Rmerge_I_obs 0.463 _reflns_shell.pdbx_Rsym_value 0.463 _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.pdbx_redundancy 4.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 877 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2R3W _refine.ls_number_reflns_obs 16879 _refine.ls_number_reflns_all 16879 _refine.pdbx_ls_sigma_I 2 _refine.pdbx_ls_sigma_F 4 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.92 _refine.ls_percent_reflns_obs 93.8 _refine.ls_R_factor_obs 0.1800 _refine.ls_R_factor_all 0.2012 _refine.ls_R_factor_R_work 0.1784 _refine.ls_R_factor_R_free 0.2306 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 893 _refine.ls_number_parameters 6559 _refine.ls_number_restraints 6289 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 'PDB entry 2PWC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2R3W _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 1553.00 _refine_analyze.occupancy_sum_non_hydrogen 1636.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1486 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 1636 _refine_hist.d_res_high 1.92 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.022 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0239 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.028 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.036 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.009 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.063 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2R3W _pdbx_refine.R_factor_all_no_cutoff 0.2012 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1784 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 13607 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2R3W _struct.title 'I84V HIV-1 protease in complex with a amino decorated pyrrolidine-based inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2R3W _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'protein-ligand complex, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLN A 92 ? GLY A 94 ? GLN A 92 GLY A 94 5 ? 3 HELX_P HELX_P3 3 GLY B 86 ? THR B 91 ? GLY B 86 THR B 91 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3 A 2 THR B 96 ? ASN B 98 ? THR B 96 ASN B 98 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? ILE B 3 ? GLN B 2 ILE B 3 B 1 TRP A 42 ? GLY A 49 ? TRP A 42 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 THR A 31 ? LEU A 33 ? THR A 31 LEU A 33 B 5 VAL A 84 ? ILE A 85 ? VAL A 84 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 43 GLY B 49 C 2 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 C 3 HIS B 69 ? VAL B 77 ? HIS B 69 VAL B 77 C 4 VAL B 32 ? LEU B 33 ? VAL B 32 LEU B 33 C 5 VAL B 84 ? ILE B 85 ? VAL B 84 ILE B 85 C 6 GLN B 18 ? LEU B 24 ? GLN B 18 LEU B 24 C 7 LEU B 10 ? ILE B 15 ? LEU B 10 ILE B 15 C 8 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 97 A 2 3 O ASN B 98 ? O ASN B 98 N THR A 96 ? N THR A 96 A 3 4 N LEU A 97 ? N LEU A 97 O ILE B 3 ? O ILE B 3 B 1 2 N LYS A 43 ? N LYS A 43 O GLN A 58 ? O GLN A 58 B 2 3 N ILE A 64 ? N ILE A 64 O ALA A 71 ? O ALA A 71 B 3 4 O LEU A 76 ? O LEU A 76 N LEU A 33 ? N LEU A 33 B 4 5 N VAL A 32 ? N VAL A 32 O VAL A 84 ? O VAL A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N LYS A 14 ? N LYS A 14 O GLU A 65 ? O GLU A 65 C 1 2 N LYS B 43 ? N LYS B 43 O GLN B 58 ? O GLN B 58 C 2 3 N TYR B 59 ? N TYR B 59 O VAL B 75 ? O VAL B 75 C 3 4 O LEU B 76 ? O LEU B 76 N LEU B 33 ? N LEU B 33 C 4 5 N VAL B 32 ? N VAL B 32 O VAL B 84 ? O VAL B 84 C 5 6 O ILE B 85 ? O ILE B 85 N LEU B 23 ? N LEU B 23 C 6 7 O LYS B 20 ? O LYS B 20 N ILE B 13 ? N ILE B 13 C 7 8 N LYS B 14 ? N LYS B 14 O GLU B 65 ? O GLU B 65 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id G3G _struct_site.pdbx_auth_seq_id 2501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'BINDING SITE FOR RESIDUE G3G A 2501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ASP A 25 ? ASP A 25 . ? 1_555 ? 2 AC1 17 GLY A 27 ? GLY A 27 . ? 1_555 ? 3 AC1 17 ALA A 28 ? ALA A 28 . ? 1_555 ? 4 AC1 17 ASP A 30 ? ASP A 30 . ? 1_555 ? 5 AC1 17 GLY A 48 ? GLY A 48 . ? 1_555 ? 6 AC1 17 ILE A 50 ? ILE A 50 . ? 1_555 ? 7 AC1 17 HOH E . ? HOH A 3083 . ? 1_555 ? 8 AC1 17 LEU B 23 ? LEU B 23 . ? 1_555 ? 9 AC1 17 ASP B 25 ? ASP B 25 . ? 1_555 ? 10 AC1 17 GLY B 27 ? GLY B 27 . ? 1_555 ? 11 AC1 17 ALA B 28 ? ALA B 28 . ? 1_555 ? 12 AC1 17 ASP B 30 ? ASP B 30 . ? 1_555 ? 13 AC1 17 GLY B 48 ? GLY B 48 . ? 1_555 ? 14 AC1 17 GLY B 49 ? GLY B 49 . ? 1_555 ? 15 AC1 17 ILE B 50 ? ILE B 50 . ? 1_555 ? 16 AC1 17 PRO B 81 ? PRO B 81 . ? 1_555 ? 17 AC1 17 HOH F . ? HOH B 3024 . ? 1_555 ? # _database_PDB_matrix.entry_id 2R3W _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2R3W _atom_sites.fract_transf_matrix[1][1] 0.017441 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011660 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021478 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS ALA A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ARG 41 41 41 ARG ALA A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 LEU 63 63 63 LEU ALA A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ALA A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 GLN 7 7 7 GLN GLN B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN ALA B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 MET 36 36 36 MET MET B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 TRP 42 42 42 TRP TRP B . n B 1 43 LYS 43 43 43 LYS ALA B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 MET 46 46 46 MET MET B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 LYS 55 55 55 LYS ALA B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 CYS 67 67 67 CYS CYS B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 VAL 84 84 84 VAL VAL B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 PHE 99 99 99 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G3G 1 2501 2501 G3G LIG A . D 3 CL 1 2601 2601 CL CL B . E 4 HOH 1 3003 3003 HOH HOH A . E 4 HOH 2 3004 3004 HOH HOH A . E 4 HOH 3 3006 3006 HOH HOH A . E 4 HOH 4 3007 3007 HOH HOH A . E 4 HOH 5 3009 3009 HOH HOH A . E 4 HOH 6 3010 3010 HOH HOH A . E 4 HOH 7 3011 3011 HOH HOH A . E 4 HOH 8 3012 3012 HOH HOH A . E 4 HOH 9 3019 3019 HOH HOH A . E 4 HOH 10 3022 3022 HOH HOH A . E 4 HOH 11 3023 3023 HOH HOH A . E 4 HOH 12 3027 3027 HOH HOH A . E 4 HOH 13 3033 3033 HOH HOH A . E 4 HOH 14 3037 3037 HOH HOH A . E 4 HOH 15 3038 3038 HOH HOH A . E 4 HOH 16 3040 3040 HOH HOH A . E 4 HOH 17 3041 3041 HOH HOH A . E 4 HOH 18 3046 3046 HOH HOH A . E 4 HOH 19 3049 3049 HOH HOH A . E 4 HOH 20 3050 3050 HOH HOH A . E 4 HOH 21 3055 3055 HOH HOH A . E 4 HOH 22 3057 3057 HOH HOH A . E 4 HOH 23 3062 3062 HOH HOH A . E 4 HOH 24 3063 3063 HOH HOH A . E 4 HOH 25 3064 3064 HOH HOH A . E 4 HOH 26 3065 3065 HOH HOH A . E 4 HOH 27 3066 3066 HOH HOH A . E 4 HOH 28 3067 3067 HOH HOH A . E 4 HOH 29 3068 3068 HOH HOH A . E 4 HOH 30 3076 3076 HOH HOH A . E 4 HOH 31 3077 3077 HOH HOH A . E 4 HOH 32 3078 3078 HOH HOH A . E 4 HOH 33 3079 3079 HOH HOH A . E 4 HOH 34 3080 3080 HOH HOH A . E 4 HOH 35 3083 3083 HOH HOH A . E 4 HOH 36 3085 3085 HOH HOH A . E 4 HOH 37 3088 3088 HOH HOH A . E 4 HOH 38 3089 3089 HOH HOH A . E 4 HOH 39 3093 3093 HOH HOH A . E 4 HOH 40 3094 3094 HOH HOH A . E 4 HOH 41 3098 3098 HOH HOH A . E 4 HOH 42 3099 3099 HOH HOH A . E 4 HOH 43 3100 3100 HOH HOH A . E 4 HOH 44 3101 3101 HOH HOH A . E 4 HOH 45 3106 3106 HOH HOH A . E 4 HOH 46 3108 3108 HOH HOH A . F 4 HOH 1 3001 3001 HOH HOH B . F 4 HOH 2 3002 3002 HOH HOH B . F 4 HOH 3 3005 3005 HOH HOH B . F 4 HOH 4 3008 3008 HOH HOH B . F 4 HOH 5 3013 3013 HOH HOH B . F 4 HOH 6 3014 3014 HOH HOH B . F 4 HOH 7 3015 3015 HOH HOH B . F 4 HOH 8 3016 3016 HOH HOH B . F 4 HOH 9 3017 3017 HOH HOH B . F 4 HOH 10 3018 3018 HOH HOH B . F 4 HOH 11 3020 3020 HOH HOH B . F 4 HOH 12 3021 3021 HOH HOH B . F 4 HOH 13 3024 3024 HOH HOH B . F 4 HOH 14 3025 3025 HOH HOH B . F 4 HOH 15 3026 3026 HOH HOH B . F 4 HOH 16 3028 3028 HOH HOH B . F 4 HOH 17 3029 3029 HOH HOH B . F 4 HOH 18 3030 3030 HOH HOH B . F 4 HOH 19 3031 3031 HOH HOH B . F 4 HOH 20 3032 3032 HOH HOH B . F 4 HOH 21 3034 3034 HOH HOH B . F 4 HOH 22 3035 3035 HOH HOH B . F 4 HOH 23 3036 3036 HOH HOH B . F 4 HOH 24 3039 3039 HOH HOH B . F 4 HOH 25 3042 3042 HOH HOH B . F 4 HOH 26 3043 3043 HOH HOH B . F 4 HOH 27 3044 3044 HOH HOH B . F 4 HOH 28 3045 3045 HOH HOH B . F 4 HOH 29 3047 3047 HOH HOH B . F 4 HOH 30 3048 3048 HOH HOH B . F 4 HOH 31 3051 3051 HOH HOH B . F 4 HOH 32 3052 3052 HOH HOH B . F 4 HOH 33 3053 3053 HOH HOH B . F 4 HOH 34 3054 3054 HOH HOH B . F 4 HOH 35 3056 3056 HOH HOH B . F 4 HOH 36 3058 3058 HOH HOH B . F 4 HOH 37 3059 3059 HOH HOH B . F 4 HOH 38 3060 3060 HOH HOH B . F 4 HOH 39 3061 3061 HOH HOH B . F 4 HOH 40 3069 3069 HOH HOH B . F 4 HOH 41 3070 3070 HOH HOH B . F 4 HOH 42 3071 3071 HOH HOH B . F 4 HOH 43 3072 3072 HOH HOH B . F 4 HOH 44 3073 3073 HOH HOH B . F 4 HOH 45 3074 3074 HOH HOH B . F 4 HOH 46 3075 3075 HOH HOH B . F 4 HOH 47 3081 3081 HOH HOH B . F 4 HOH 48 3082 3082 HOH HOH B . F 4 HOH 49 3084 3084 HOH HOH B . F 4 HOH 50 3086 3086 HOH HOH B . F 4 HOH 51 3087 3087 HOH HOH B . F 4 HOH 52 3090 3090 HOH HOH B . F 4 HOH 53 3091 3091 HOH HOH B . F 4 HOH 54 3092 3092 HOH HOH B . F 4 HOH 55 3095 3095 HOH HOH B . F 4 HOH 56 3096 3096 HOH HOH B . F 4 HOH 57 3097 3097 HOH HOH B . F 4 HOH 58 3102 3102 HOH HOH B . F 4 HOH 59 3103 3103 HOH HOH B . F 4 HOH 60 3104 3104 HOH HOH B . F 4 HOH 61 3105 3105 HOH HOH B . F 4 HOH 62 3107 3107 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4880 ? 1 MORE -30.2 ? 1 'SSA (A^2)' 9070 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 CrystalClear 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHASER phasing . ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 59 ? ? CG A TYR 59 ? ? CD2 A TYR 59 ? ? 116.73 121.00 -4.27 0.60 N 2 1 CB A TYR 59 ? ? CG A TYR 59 ? ? CD1 A TYR 59 ? ? 125.22 121.00 4.22 0.60 N 3 1 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH1 A ARG 87 ? ? 123.84 120.30 3.54 0.50 N 4 1 NE B ARG 87 ? ? CZ B ARG 87 ? ? NH1 B ARG 87 ? ? 124.41 120.30 4.11 0.50 N 5 1 NE B ARG 87 ? ? CZ B ARG 87 ? ? NH2 B ARG 87 ? ? 117.00 120.30 -3.30 0.50 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 14 ? CG ? A LYS 14 CG 2 1 Y 1 A LYS 14 ? CD ? A LYS 14 CD 3 1 Y 1 A LYS 14 ? CE ? A LYS 14 CE 4 1 Y 1 A LYS 14 ? NZ ? A LYS 14 NZ 5 1 Y 1 A ARG 41 ? CG ? A ARG 41 CG 6 1 Y 1 A ARG 41 ? CD ? A ARG 41 CD 7 1 Y 1 A ARG 41 ? NE ? A ARG 41 NE 8 1 Y 1 A ARG 41 ? CZ ? A ARG 41 CZ 9 1 Y 1 A ARG 41 ? NH1 ? A ARG 41 NH1 10 1 Y 1 A ARG 41 ? NH2 ? A ARG 41 NH2 11 1 Y 1 A LEU 63 ? CG ? A LEU 63 CG 12 1 Y 1 A LEU 63 ? CD1 ? A LEU 63 CD1 13 1 Y 1 A LEU 63 ? CD2 ? A LEU 63 CD2 14 1 Y 1 A ILE 72 ? CG1 ? A ILE 72 CG1 15 1 Y 1 A ILE 72 ? CG2 ? A ILE 72 CG2 16 1 Y 1 A ILE 72 ? CD1 ? A ILE 72 CD1 17 1 Y 1 B GLN 18 ? CG ? B GLN 18 CG 18 1 Y 1 B GLN 18 ? CD ? B GLN 18 CD 19 1 Y 1 B GLN 18 ? OE1 ? B GLN 18 OE1 20 1 Y 1 B GLN 18 ? NE2 ? B GLN 18 NE2 21 1 Y 1 B LYS 43 ? CG ? B LYS 43 CG 22 1 Y 1 B LYS 43 ? CD ? B LYS 43 CD 23 1 Y 1 B LYS 43 ? CE ? B LYS 43 CE 24 1 Y 1 B LYS 43 ? NZ ? B LYS 43 NZ 25 1 Y 1 B LYS 55 ? CG ? B LYS 55 CG 26 1 Y 1 B LYS 55 ? CD ? B LYS 55 CD 27 1 Y 1 B LYS 55 ? CE ? B LYS 55 CE 28 1 Y 1 B LYS 55 ? NZ ? B LYS 55 NZ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 G3G C2 C Y N 89 G3G C6 C Y N 90 G3G C5 C Y N 91 G3G C20 C Y N 92 G3G C27 C Y N 93 G3G C18 C Y N 94 G3G S9 S N N 95 G3G O40 O N N 96 G3G O11 O N N 97 G3G N32 N N N 98 G3G C33 C N N 99 G3G C34 C Y N 100 G3G C38 C Y N 101 G3G C39 C Y N 102 G3G C37 C Y N 103 G3G C36 C Y N 104 G3G C35 C Y N 105 G3G C24 C N S 106 G3G C25 C N N 107 G3G N22 N N N 108 G3G C21 C N N 109 G3G C23 C N S 110 G3G N28 N N N 111 G3G C7 C N N 112 G3G C12 C Y N 113 G3G C14 C Y N 114 G3G C30 C Y N 115 G3G C31 C Y N 116 G3G C29 C Y N 117 G3G C13 C Y N 118 G3G S8 S N N 119 G3G C26 C Y N 120 G3G C17 C Y N 121 G3G C1 C Y N 122 G3G C4 C Y N 123 G3G C3 C Y N 124 G3G C19 C Y N 125 G3G O41 O N N 126 G3G O10 O N N 127 G3G N42 N N N 128 G3G N43 N N N 129 G3G H2 H N N 130 G3G H5 H N N 131 G3G H20 H N N 132 G3G H18 H N N 133 G3G H331 H N N 134 G3G H332 H N N 135 G3G H38 H N N 136 G3G H39 H N N 137 G3G H37 H N N 138 G3G H36 H N N 139 G3G H35 H N N 140 G3G H24 H N N 141 G3G H251 H N N 142 G3G H252 H N N 143 G3G HN22 H N N 144 G3G H211 H N N 145 G3G H212 H N N 146 G3G H23 H N N 147 G3G H71 H N N 148 G3G H72 H N N 149 G3G H14 H N N 150 G3G H30 H N N 151 G3G H31 H N N 152 G3G H29 H N N 153 G3G H13 H N N 154 G3G H17 H N N 155 G3G H1 H N N 156 G3G H3 H N N 157 G3G H19 H N N 158 G3G H421 H N N 159 G3G H422 H N N 160 G3G H431 H N N 161 G3G H432 H N N 162 GLN N N N N 163 GLN CA C N S 164 GLN C C N N 165 GLN O O N N 166 GLN CB C N N 167 GLN CG C N N 168 GLN CD C N N 169 GLN OE1 O N N 170 GLN NE2 N N N 171 GLN OXT O N N 172 GLN H H N N 173 GLN H2 H N N 174 GLN HA H N N 175 GLN HB2 H N N 176 GLN HB3 H N N 177 GLN HG2 H N N 178 GLN HG3 H N N 179 GLN HE21 H N N 180 GLN HE22 H N N 181 GLN HXT H N N 182 GLU N N N N 183 GLU CA C N S 184 GLU C C N N 185 GLU O O N N 186 GLU CB C N N 187 GLU CG C N N 188 GLU CD C N N 189 GLU OE1 O N N 190 GLU OE2 O N N 191 GLU OXT O N N 192 GLU H H N N 193 GLU H2 H N N 194 GLU HA H N N 195 GLU HB2 H N N 196 GLU HB3 H N N 197 GLU HG2 H N N 198 GLU HG3 H N N 199 GLU HE2 H N N 200 GLU HXT H N N 201 GLY N N N N 202 GLY CA C N N 203 GLY C C N N 204 GLY O O N N 205 GLY OXT O N N 206 GLY H H N N 207 GLY H2 H N N 208 GLY HA2 H N N 209 GLY HA3 H N N 210 GLY HXT H N N 211 HIS N N N N 212 HIS CA C N S 213 HIS C C N N 214 HIS O O N N 215 HIS CB C N N 216 HIS CG C Y N 217 HIS ND1 N Y N 218 HIS CD2 C Y N 219 HIS CE1 C Y N 220 HIS NE2 N Y N 221 HIS OXT O N N 222 HIS H H N N 223 HIS H2 H N N 224 HIS HA H N N 225 HIS HB2 H N N 226 HIS HB3 H N N 227 HIS HD1 H N N 228 HIS HD2 H N N 229 HIS HE1 H N N 230 HIS HE2 H N N 231 HIS HXT H N N 232 HOH O O N N 233 HOH H1 H N N 234 HOH H2 H N N 235 ILE N N N N 236 ILE CA C N S 237 ILE C C N N 238 ILE O O N N 239 ILE CB C N S 240 ILE CG1 C N N 241 ILE CG2 C N N 242 ILE CD1 C N N 243 ILE OXT O N N 244 ILE H H N N 245 ILE H2 H N N 246 ILE HA H N N 247 ILE HB H N N 248 ILE HG12 H N N 249 ILE HG13 H N N 250 ILE HG21 H N N 251 ILE HG22 H N N 252 ILE HG23 H N N 253 ILE HD11 H N N 254 ILE HD12 H N N 255 ILE HD13 H N N 256 ILE HXT H N N 257 LEU N N N N 258 LEU CA C N S 259 LEU C C N N 260 LEU O O N N 261 LEU CB C N N 262 LEU CG C N N 263 LEU CD1 C N N 264 LEU CD2 C N N 265 LEU OXT O N N 266 LEU H H N N 267 LEU H2 H N N 268 LEU HA H N N 269 LEU HB2 H N N 270 LEU HB3 H N N 271 LEU HG H N N 272 LEU HD11 H N N 273 LEU HD12 H N N 274 LEU HD13 H N N 275 LEU HD21 H N N 276 LEU HD22 H N N 277 LEU HD23 H N N 278 LEU HXT H N N 279 LYS N N N N 280 LYS CA C N S 281 LYS C C N N 282 LYS O O N N 283 LYS CB C N N 284 LYS CG C N N 285 LYS CD C N N 286 LYS CE C N N 287 LYS NZ N N N 288 LYS OXT O N N 289 LYS H H N N 290 LYS H2 H N N 291 LYS HA H N N 292 LYS HB2 H N N 293 LYS HB3 H N N 294 LYS HG2 H N N 295 LYS HG3 H N N 296 LYS HD2 H N N 297 LYS HD3 H N N 298 LYS HE2 H N N 299 LYS HE3 H N N 300 LYS HZ1 H N N 301 LYS HZ2 H N N 302 LYS HZ3 H N N 303 LYS HXT H N N 304 MET N N N N 305 MET CA C N S 306 MET C C N N 307 MET O O N N 308 MET CB C N N 309 MET CG C N N 310 MET SD S N N 311 MET CE C N N 312 MET OXT O N N 313 MET H H N N 314 MET H2 H N N 315 MET HA H N N 316 MET HB2 H N N 317 MET HB3 H N N 318 MET HG2 H N N 319 MET HG3 H N N 320 MET HE1 H N N 321 MET HE2 H N N 322 MET HE3 H N N 323 MET HXT H N N 324 PHE N N N N 325 PHE CA C N S 326 PHE C C N N 327 PHE O O N N 328 PHE CB C N N 329 PHE CG C Y N 330 PHE CD1 C Y N 331 PHE CD2 C Y N 332 PHE CE1 C Y N 333 PHE CE2 C Y N 334 PHE CZ C Y N 335 PHE OXT O N N 336 PHE H H N N 337 PHE H2 H N N 338 PHE HA H N N 339 PHE HB2 H N N 340 PHE HB3 H N N 341 PHE HD1 H N N 342 PHE HD2 H N N 343 PHE HE1 H N N 344 PHE HE2 H N N 345 PHE HZ H N N 346 PHE HXT H N N 347 PRO N N N N 348 PRO CA C N S 349 PRO C C N N 350 PRO O O N N 351 PRO CB C N N 352 PRO CG C N N 353 PRO CD C N N 354 PRO OXT O N N 355 PRO H H N N 356 PRO HA H N N 357 PRO HB2 H N N 358 PRO HB3 H N N 359 PRO HG2 H N N 360 PRO HG3 H N N 361 PRO HD2 H N N 362 PRO HD3 H N N 363 PRO HXT H N N 364 SER N N N N 365 SER CA C N S 366 SER C C N N 367 SER O O N N 368 SER CB C N N 369 SER OG O N N 370 SER OXT O N N 371 SER H H N N 372 SER H2 H N N 373 SER HA H N N 374 SER HB2 H N N 375 SER HB3 H N N 376 SER HG H N N 377 SER HXT H N N 378 THR N N N N 379 THR CA C N S 380 THR C C N N 381 THR O O N N 382 THR CB C N R 383 THR OG1 O N N 384 THR CG2 C N N 385 THR OXT O N N 386 THR H H N N 387 THR H2 H N N 388 THR HA H N N 389 THR HB H N N 390 THR HG1 H N N 391 THR HG21 H N N 392 THR HG22 H N N 393 THR HG23 H N N 394 THR HXT H N N 395 TRP N N N N 396 TRP CA C N S 397 TRP C C N N 398 TRP O O N N 399 TRP CB C N N 400 TRP CG C Y N 401 TRP CD1 C Y N 402 TRP CD2 C Y N 403 TRP NE1 N Y N 404 TRP CE2 C Y N 405 TRP CE3 C Y N 406 TRP CZ2 C Y N 407 TRP CZ3 C Y N 408 TRP CH2 C Y N 409 TRP OXT O N N 410 TRP H H N N 411 TRP H2 H N N 412 TRP HA H N N 413 TRP HB2 H N N 414 TRP HB3 H N N 415 TRP HD1 H N N 416 TRP HE1 H N N 417 TRP HE3 H N N 418 TRP HZ2 H N N 419 TRP HZ3 H N N 420 TRP HH2 H N N 421 TRP HXT H N N 422 TYR N N N N 423 TYR CA C N S 424 TYR C C N N 425 TYR O O N N 426 TYR CB C N N 427 TYR CG C Y N 428 TYR CD1 C Y N 429 TYR CD2 C Y N 430 TYR CE1 C Y N 431 TYR CE2 C Y N 432 TYR CZ C Y N 433 TYR OH O N N 434 TYR OXT O N N 435 TYR H H N N 436 TYR H2 H N N 437 TYR HA H N N 438 TYR HB2 H N N 439 TYR HB3 H N N 440 TYR HD1 H N N 441 TYR HD2 H N N 442 TYR HE1 H N N 443 TYR HE2 H N N 444 TYR HH H N N 445 TYR HXT H N N 446 VAL N N N N 447 VAL CA C N S 448 VAL C C N N 449 VAL O O N N 450 VAL CB C N N 451 VAL CG1 C N N 452 VAL CG2 C N N 453 VAL OXT O N N 454 VAL H H N N 455 VAL H2 H N N 456 VAL HA H N N 457 VAL HB H N N 458 VAL HG11 H N N 459 VAL HG12 H N N 460 VAL HG13 H N N 461 VAL HG21 H N N 462 VAL HG22 H N N 463 VAL HG23 H N N 464 VAL HXT H N N 465 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 G3G C2 C6 doub Y N 83 G3G C2 C18 sing Y N 84 G3G C2 H2 sing N N 85 G3G C6 C5 sing Y N 86 G3G C6 N43 sing N N 87 G3G C5 C20 doub Y N 88 G3G C5 H5 sing N N 89 G3G C20 C27 sing Y N 90 G3G C20 H20 sing N N 91 G3G C27 S9 sing N N 92 G3G C27 C18 doub Y N 93 G3G C18 H18 sing N N 94 G3G S9 O11 doub N N 95 G3G S9 N32 sing N N 96 G3G S9 O40 doub N N 97 G3G N32 C24 sing N N 98 G3G N32 C33 sing N N 99 G3G C33 C34 sing N N 100 G3G C33 H331 sing N N 101 G3G C33 H332 sing N N 102 G3G C34 C35 sing Y N 103 G3G C34 C38 doub Y N 104 G3G C38 C39 sing Y N 105 G3G C38 H38 sing N N 106 G3G C39 C37 doub Y N 107 G3G C39 H39 sing N N 108 G3G C37 C36 sing Y N 109 G3G C37 H37 sing N N 110 G3G C36 C35 doub Y N 111 G3G C36 H36 sing N N 112 G3G C35 H35 sing N N 113 G3G C24 C23 sing N N 114 G3G C24 C25 sing N N 115 G3G C24 H24 sing N N 116 G3G C25 N22 sing N N 117 G3G C25 H251 sing N N 118 G3G C25 H252 sing N N 119 G3G N22 C21 sing N N 120 G3G N22 HN22 sing N N 121 G3G C21 C23 sing N N 122 G3G C21 H211 sing N N 123 G3G C21 H212 sing N N 124 G3G C23 N28 sing N N 125 G3G C23 H23 sing N N 126 G3G N28 S8 sing N N 127 G3G N28 C7 sing N N 128 G3G C7 C12 sing N N 129 G3G C7 H71 sing N N 130 G3G C7 H72 sing N N 131 G3G C12 C13 sing Y N 132 G3G C12 C14 doub Y N 133 G3G C14 C30 sing Y N 134 G3G C14 H14 sing N N 135 G3G C30 C31 doub Y N 136 G3G C30 H30 sing N N 137 G3G C31 C29 sing Y N 138 G3G C31 H31 sing N N 139 G3G C29 C13 doub Y N 140 G3G C29 H29 sing N N 141 G3G C13 H13 sing N N 142 G3G S8 O41 doub N N 143 G3G S8 C26 sing N N 144 G3G S8 O10 doub N N 145 G3G C26 C17 sing Y N 146 G3G C26 C19 doub Y N 147 G3G C17 C1 doub Y N 148 G3G C17 H17 sing N N 149 G3G C1 C4 sing Y N 150 G3G C1 H1 sing N N 151 G3G C4 N42 sing N N 152 G3G C4 C3 doub Y N 153 G3G C3 C19 sing Y N 154 G3G C3 H3 sing N N 155 G3G C19 H19 sing N N 156 G3G N42 H421 sing N N 157 G3G N42 H422 sing N N 158 G3G N43 H431 sing N N 159 G3G N43 H432 sing N N 160 GLN N CA sing N N 161 GLN N H sing N N 162 GLN N H2 sing N N 163 GLN CA C sing N N 164 GLN CA CB sing N N 165 GLN CA HA sing N N 166 GLN C O doub N N 167 GLN C OXT sing N N 168 GLN CB CG sing N N 169 GLN CB HB2 sing N N 170 GLN CB HB3 sing N N 171 GLN CG CD sing N N 172 GLN CG HG2 sing N N 173 GLN CG HG3 sing N N 174 GLN CD OE1 doub N N 175 GLN CD NE2 sing N N 176 GLN NE2 HE21 sing N N 177 GLN NE2 HE22 sing N N 178 GLN OXT HXT sing N N 179 GLU N CA sing N N 180 GLU N H sing N N 181 GLU N H2 sing N N 182 GLU CA C sing N N 183 GLU CA CB sing N N 184 GLU CA HA sing N N 185 GLU C O doub N N 186 GLU C OXT sing N N 187 GLU CB CG sing N N 188 GLU CB HB2 sing N N 189 GLU CB HB3 sing N N 190 GLU CG CD sing N N 191 GLU CG HG2 sing N N 192 GLU CG HG3 sing N N 193 GLU CD OE1 doub N N 194 GLU CD OE2 sing N N 195 GLU OE2 HE2 sing N N 196 GLU OXT HXT sing N N 197 GLY N CA sing N N 198 GLY N H sing N N 199 GLY N H2 sing N N 200 GLY CA C sing N N 201 GLY CA HA2 sing N N 202 GLY CA HA3 sing N N 203 GLY C O doub N N 204 GLY C OXT sing N N 205 GLY OXT HXT sing N N 206 HIS N CA sing N N 207 HIS N H sing N N 208 HIS N H2 sing N N 209 HIS CA C sing N N 210 HIS CA CB sing N N 211 HIS CA HA sing N N 212 HIS C O doub N N 213 HIS C OXT sing N N 214 HIS CB CG sing N N 215 HIS CB HB2 sing N N 216 HIS CB HB3 sing N N 217 HIS CG ND1 sing Y N 218 HIS CG CD2 doub Y N 219 HIS ND1 CE1 doub Y N 220 HIS ND1 HD1 sing N N 221 HIS CD2 NE2 sing Y N 222 HIS CD2 HD2 sing N N 223 HIS CE1 NE2 sing Y N 224 HIS CE1 HE1 sing N N 225 HIS NE2 HE2 sing N N 226 HIS OXT HXT sing N N 227 HOH O H1 sing N N 228 HOH O H2 sing N N 229 ILE N CA sing N N 230 ILE N H sing N N 231 ILE N H2 sing N N 232 ILE CA C sing N N 233 ILE CA CB sing N N 234 ILE CA HA sing N N 235 ILE C O doub N N 236 ILE C OXT sing N N 237 ILE CB CG1 sing N N 238 ILE CB CG2 sing N N 239 ILE CB HB sing N N 240 ILE CG1 CD1 sing N N 241 ILE CG1 HG12 sing N N 242 ILE CG1 HG13 sing N N 243 ILE CG2 HG21 sing N N 244 ILE CG2 HG22 sing N N 245 ILE CG2 HG23 sing N N 246 ILE CD1 HD11 sing N N 247 ILE CD1 HD12 sing N N 248 ILE CD1 HD13 sing N N 249 ILE OXT HXT sing N N 250 LEU N CA sing N N 251 LEU N H sing N N 252 LEU N H2 sing N N 253 LEU CA C sing N N 254 LEU CA CB sing N N 255 LEU CA HA sing N N 256 LEU C O doub N N 257 LEU C OXT sing N N 258 LEU CB CG sing N N 259 LEU CB HB2 sing N N 260 LEU CB HB3 sing N N 261 LEU CG CD1 sing N N 262 LEU CG CD2 sing N N 263 LEU CG HG sing N N 264 LEU CD1 HD11 sing N N 265 LEU CD1 HD12 sing N N 266 LEU CD1 HD13 sing N N 267 LEU CD2 HD21 sing N N 268 LEU CD2 HD22 sing N N 269 LEU CD2 HD23 sing N N 270 LEU OXT HXT sing N N 271 LYS N CA sing N N 272 LYS N H sing N N 273 LYS N H2 sing N N 274 LYS CA C sing N N 275 LYS CA CB sing N N 276 LYS CA HA sing N N 277 LYS C O doub N N 278 LYS C OXT sing N N 279 LYS CB CG sing N N 280 LYS CB HB2 sing N N 281 LYS CB HB3 sing N N 282 LYS CG CD sing N N 283 LYS CG HG2 sing N N 284 LYS CG HG3 sing N N 285 LYS CD CE sing N N 286 LYS CD HD2 sing N N 287 LYS CD HD3 sing N N 288 LYS CE NZ sing N N 289 LYS CE HE2 sing N N 290 LYS CE HE3 sing N N 291 LYS NZ HZ1 sing N N 292 LYS NZ HZ2 sing N N 293 LYS NZ HZ3 sing N N 294 LYS OXT HXT sing N N 295 MET N CA sing N N 296 MET N H sing N N 297 MET N H2 sing N N 298 MET CA C sing N N 299 MET CA CB sing N N 300 MET CA HA sing N N 301 MET C O doub N N 302 MET C OXT sing N N 303 MET CB CG sing N N 304 MET CB HB2 sing N N 305 MET CB HB3 sing N N 306 MET CG SD sing N N 307 MET CG HG2 sing N N 308 MET CG HG3 sing N N 309 MET SD CE sing N N 310 MET CE HE1 sing N N 311 MET CE HE2 sing N N 312 MET CE HE3 sing N N 313 MET OXT HXT sing N N 314 PHE N CA sing N N 315 PHE N H sing N N 316 PHE N H2 sing N N 317 PHE CA C sing N N 318 PHE CA CB sing N N 319 PHE CA HA sing N N 320 PHE C O doub N N 321 PHE C OXT sing N N 322 PHE CB CG sing N N 323 PHE CB HB2 sing N N 324 PHE CB HB3 sing N N 325 PHE CG CD1 doub Y N 326 PHE CG CD2 sing Y N 327 PHE CD1 CE1 sing Y N 328 PHE CD1 HD1 sing N N 329 PHE CD2 CE2 doub Y N 330 PHE CD2 HD2 sing N N 331 PHE CE1 CZ doub Y N 332 PHE CE1 HE1 sing N N 333 PHE CE2 CZ sing Y N 334 PHE CE2 HE2 sing N N 335 PHE CZ HZ sing N N 336 PHE OXT HXT sing N N 337 PRO N CA sing N N 338 PRO N CD sing N N 339 PRO N H sing N N 340 PRO CA C sing N N 341 PRO CA CB sing N N 342 PRO CA HA sing N N 343 PRO C O doub N N 344 PRO C OXT sing N N 345 PRO CB CG sing N N 346 PRO CB HB2 sing N N 347 PRO CB HB3 sing N N 348 PRO CG CD sing N N 349 PRO CG HG2 sing N N 350 PRO CG HG3 sing N N 351 PRO CD HD2 sing N N 352 PRO CD HD3 sing N N 353 PRO OXT HXT sing N N 354 SER N CA sing N N 355 SER N H sing N N 356 SER N H2 sing N N 357 SER CA C sing N N 358 SER CA CB sing N N 359 SER CA HA sing N N 360 SER C O doub N N 361 SER C OXT sing N N 362 SER CB OG sing N N 363 SER CB HB2 sing N N 364 SER CB HB3 sing N N 365 SER OG HG sing N N 366 SER OXT HXT sing N N 367 THR N CA sing N N 368 THR N H sing N N 369 THR N H2 sing N N 370 THR CA C sing N N 371 THR CA CB sing N N 372 THR CA HA sing N N 373 THR C O doub N N 374 THR C OXT sing N N 375 THR CB OG1 sing N N 376 THR CB CG2 sing N N 377 THR CB HB sing N N 378 THR OG1 HG1 sing N N 379 THR CG2 HG21 sing N N 380 THR CG2 HG22 sing N N 381 THR CG2 HG23 sing N N 382 THR OXT HXT sing N N 383 TRP N CA sing N N 384 TRP N H sing N N 385 TRP N H2 sing N N 386 TRP CA C sing N N 387 TRP CA CB sing N N 388 TRP CA HA sing N N 389 TRP C O doub N N 390 TRP C OXT sing N N 391 TRP CB CG sing N N 392 TRP CB HB2 sing N N 393 TRP CB HB3 sing N N 394 TRP CG CD1 doub Y N 395 TRP CG CD2 sing Y N 396 TRP CD1 NE1 sing Y N 397 TRP CD1 HD1 sing N N 398 TRP CD2 CE2 doub Y N 399 TRP CD2 CE3 sing Y N 400 TRP NE1 CE2 sing Y N 401 TRP NE1 HE1 sing N N 402 TRP CE2 CZ2 sing Y N 403 TRP CE3 CZ3 doub Y N 404 TRP CE3 HE3 sing N N 405 TRP CZ2 CH2 doub Y N 406 TRP CZ2 HZ2 sing N N 407 TRP CZ3 CH2 sing Y N 408 TRP CZ3 HZ3 sing N N 409 TRP CH2 HH2 sing N N 410 TRP OXT HXT sing N N 411 TYR N CA sing N N 412 TYR N H sing N N 413 TYR N H2 sing N N 414 TYR CA C sing N N 415 TYR CA CB sing N N 416 TYR CA HA sing N N 417 TYR C O doub N N 418 TYR C OXT sing N N 419 TYR CB CG sing N N 420 TYR CB HB2 sing N N 421 TYR CB HB3 sing N N 422 TYR CG CD1 doub Y N 423 TYR CG CD2 sing Y N 424 TYR CD1 CE1 sing Y N 425 TYR CD1 HD1 sing N N 426 TYR CD2 CE2 doub Y N 427 TYR CD2 HD2 sing N N 428 TYR CE1 CZ doub Y N 429 TYR CE1 HE1 sing N N 430 TYR CE2 CZ sing Y N 431 TYR CE2 HE2 sing N N 432 TYR CZ OH sing N N 433 TYR OH HH sing N N 434 TYR OXT HXT sing N N 435 VAL N CA sing N N 436 VAL N H sing N N 437 VAL N H2 sing N N 438 VAL CA C sing N N 439 VAL CA CB sing N N 440 VAL CA HA sing N N 441 VAL C O doub N N 442 VAL C OXT sing N N 443 VAL CB CG1 sing N N 444 VAL CB CG2 sing N N 445 VAL CB HB sing N N 446 VAL CG1 HG11 sing N N 447 VAL CG1 HG12 sing N N 448 VAL CG1 HG13 sing N N 449 VAL CG2 HG21 sing N N 450 VAL CG2 HG22 sing N N 451 VAL CG2 HG23 sing N N 452 VAL OXT HXT sing N N 453 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "N,N'-(3S,4S)-PYRROLIDINE-3,4-DIYLBIS(4-AMINO-N-BENZYLBENZENESULFONAMIDE)" G3G 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2PWC _pdbx_initial_refinement_model.details 'PDB entry 2PWC' #