data_2RL8 # _entry.id 2RL8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RL8 pdb_00002rl8 10.2210/pdb2rl8/pdb RCSB RCSB044995 ? ? WWPDB D_1000044995 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2RL6 . unspecified PDB 2RL7 . unspecified PDB 2RL9 . unspecified PDB 2RLB . unspecified # _pdbx_database_status.entry_id 2RL8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-10-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Olson, L.J.' 1 'Hindsgaul, O.' 2 'Kim, J.-J.P.' 3 'Dahms, N.M.' 4 # _citation.id primary _citation.title ;Structural Insights into the Mechanism of pH-dependent Ligand Binding and Release by the Cation-dependent Mannose 6-Phosphate Receptor. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 283 _citation.page_first 10124 _citation.page_last 10134 _citation.year 2008 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18272523 _citation.pdbx_database_id_DOI 10.1074/jbc.M708994200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Olson, L.J.' 1 ? primary 'Hindsgaul, O.' 2 ? primary 'Dahms, N.M.' 3 ? primary 'Kim, J.J.' 4 ? # _cell.length_a 91.659 _cell.length_b 91.659 _cell.length_c 85.079 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2RL8 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 2RL8 _symmetry.Int_Tables_number 96 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cation-dependent mannose-6-phosphate receptor' 17443.580 2 ? 'N31Q, N57Q, N68Q, N87Q' ? ? 2 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 4 non-polymer syn 6-O-phosphono-beta-D-mannopyranose 260.136 2 ? ? ? ? 5 water nat water 18.015 346 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CD Man-6-P receptor, CD-MPR, 46 kDa mannose 6-phosphate receptor, MPR 46' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TEEKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS ; _entity_poly.pdbx_seq_one_letter_code_can ;TEEKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLU n 1 3 GLU n 1 4 LYS n 1 5 THR n 1 6 CYS n 1 7 ASP n 1 8 LEU n 1 9 VAL n 1 10 GLY n 1 11 GLU n 1 12 LYS n 1 13 GLY n 1 14 LYS n 1 15 GLU n 1 16 SER n 1 17 GLU n 1 18 LYS n 1 19 GLU n 1 20 LEU n 1 21 ALA n 1 22 LEU n 1 23 LEU n 1 24 LYS n 1 25 ARG n 1 26 LEU n 1 27 THR n 1 28 PRO n 1 29 LEU n 1 30 PHE n 1 31 GLN n 1 32 LYS n 1 33 SER n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 THR n 1 38 VAL n 1 39 GLY n 1 40 GLN n 1 41 SER n 1 42 PRO n 1 43 ASP n 1 44 MET n 1 45 TYR n 1 46 SER n 1 47 TYR n 1 48 VAL n 1 49 PHE n 1 50 ARG n 1 51 VAL n 1 52 CYS n 1 53 ARG n 1 54 GLU n 1 55 ALA n 1 56 GLY n 1 57 GLN n 1 58 HIS n 1 59 SER n 1 60 SER n 1 61 GLY n 1 62 ALA n 1 63 GLY n 1 64 LEU n 1 65 VAL n 1 66 GLN n 1 67 ILE n 1 68 GLN n 1 69 LYS n 1 70 SER n 1 71 ASN n 1 72 GLY n 1 73 LYS n 1 74 GLU n 1 75 THR n 1 76 VAL n 1 77 VAL n 1 78 GLY n 1 79 ARG n 1 80 PHE n 1 81 ASN n 1 82 GLU n 1 83 THR n 1 84 GLN n 1 85 ILE n 1 86 PHE n 1 87 GLN n 1 88 GLY n 1 89 SER n 1 90 ASN n 1 91 TRP n 1 92 ILE n 1 93 MET n 1 94 LEU n 1 95 ILE n 1 96 TYR n 1 97 LYS n 1 98 GLY n 1 99 GLY n 1 100 ASP n 1 101 GLU n 1 102 TYR n 1 103 ASP n 1 104 ASN n 1 105 HIS n 1 106 CYS n 1 107 GLY n 1 108 ARG n 1 109 GLU n 1 110 GLN n 1 111 ARG n 1 112 ARG n 1 113 ALA n 1 114 VAL n 1 115 VAL n 1 116 MET n 1 117 ILE n 1 118 SER n 1 119 CYS n 1 120 ASN n 1 121 ARG n 1 122 HIS n 1 123 THR n 1 124 LEU n 1 125 ALA n 1 126 ASP n 1 127 ASN n 1 128 PHE n 1 129 ASN n 1 130 PRO n 1 131 VAL n 1 132 SER n 1 133 GLU n 1 134 GLU n 1 135 ARG n 1 136 GLY n 1 137 LYS n 1 138 VAL n 1 139 GLN n 1 140 ASP n 1 141 CYS n 1 142 PHE n 1 143 TYR n 1 144 LEU n 1 145 PHE n 1 146 GLU n 1 147 MET n 1 148 ASP n 1 149 SER n 1 150 SER n 1 151 LEU n 1 152 ALA n 1 153 CYS n 1 154 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name cattle _entity_src_gen.gene_src_genus Bos _entity_src_gen.pdbx_gene_src_gene M6PR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'cabbage looper' _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus Trichoplusia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BTI-TN-5B1-4 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MPRD_BOVIN _struct_ref.pdbx_db_accession P11456 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TEEKTCDLVGEKGKESEKELALLKRLTPLFNKSFESTVGQSPDMYSYVFRVCREAGNHSSGAGLVQINKSNGKETVVGRF NETQIFNGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2RL8 A 1 ? 154 ? P11456 29 ? 182 ? 1 154 2 1 2RL8 B 1 ? 154 ? P11456 29 ? 182 ? 1 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2RL8 GLN A 31 ? UNP P11456 ASN 59 'engineered mutation' 31 1 1 2RL8 GLN A 57 ? UNP P11456 ASN 85 'engineered mutation' 57 2 1 2RL8 GLN A 68 ? UNP P11456 ASN 96 'engineered mutation' 68 3 1 2RL8 GLN A 87 ? UNP P11456 ASN 115 'engineered mutation' 87 4 2 2RL8 GLN B 31 ? UNP P11456 ASN 59 'engineered mutation' 31 5 2 2RL8 GLN B 57 ? UNP P11456 ASN 85 'engineered mutation' 57 6 2 2RL8 GLN B 68 ? UNP P11456 ASN 96 'engineered mutation' 68 7 2 2RL8 GLN B 87 ? UNP P11456 ASN 115 'engineered mutation' 87 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M6D 'D-saccharide, beta linking' n 6-O-phosphono-beta-D-mannopyranose 'beta-D-mannose-6-phosphate; 6-O-phosphono-beta-D-mannose; 6-O-phosphono-D-mannose; 6-O-phosphono-mannose' 'C6 H13 O9 P' 260.136 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2RL8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.56 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.pdbx_details '0.1M cacodylate, 25% PEG5000MME, 0.2M ammonium sulfate, pH 6.5, vapor diffusion, temperature 292K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2006-09-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0332 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 1.0332 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 2RL8 _reflns.d_resolution_high 1.450 _reflns.d_resolution_low 30.000 _reflns.number_obs 60846 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_netI_over_sigmaI 10.500 _reflns.pdbx_chi_squared 1.767 _reflns.pdbx_redundancy 8.100 _reflns.percent_possible_obs 94.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.45 1.50 ? ? ? 0.637 ? ? 0.614 3.90 ? 4712 74.00 1 1 1.50 1.56 ? ? ? 0.489 ? ? 0.690 6.20 ? 5754 90.40 2 1 1.56 1.63 ? ? ? 0.348 ? ? 0.852 8.10 ? 6198 97.20 3 1 1.63 1.72 ? ? ? 0.271 ? ? 0.818 8.80 ? 6264 97.90 4 1 1.72 1.83 ? ? ? 0.195 ? ? 0.947 8.90 ? 6286 98.20 5 1 1.83 1.97 ? ? ? 0.128 ? ? 1.226 9.00 ? 6345 98.80 6 1 1.97 2.17 ? ? ? 0.091 ? ? 1.712 9.00 ? 6398 99.30 7 1 2.17 2.48 ? ? ? 0.074 ? ? 2.155 9.10 ? 6484 99.70 8 1 2.48 3.12 ? ? ? 0.060 ? ? 2.854 9.10 ? 6547 99.80 9 1 3.12 30.00 ? ? ? 0.059 ? ? 4.912 7.90 ? 5858 85.50 10 1 # _refine.entry_id 2RL8 _refine.ls_d_res_high 1.450 _refine.ls_d_res_low 30.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 89.200 _refine.ls_number_reflns_obs 60846 _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.237 _refine.ls_percent_reflns_R_free 5.400 _refine.ls_number_reflns_R_free 4334 _refine.B_iso_mean 17.972 _refine.solvent_model_param_bsol 48.196 _refine.aniso_B[1][1] -0.567 _refine.aniso_B[2][2] -0.567 _refine.aniso_B[3][3] 1.133 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2366 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 62 _refine_hist.number_atoms_solvent 346 _refine_hist.number_atoms_total 2774 _refine_hist.d_res_high 1.450 _refine_hist.d_res_low 30.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.199 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.201 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 1.919 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 3.273 2.500 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 m6p.par ? 'X-RAY DIFFRACTION' 3 water_rep.param ? 'X-RAY DIFFRACTION' 4 carbohydrate.param ? 'X-RAY DIFFRACTION' 5 ion.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2RL8 _struct.title 'Crystal Structure cation-dependent mannose 6-phosphate receptor at pH 6.5 bound to M6P' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RL8 _struct_keywords.text ;P-type lectin, receptor, mannose 6-phosphate, lectin, Glycoprotein, Lysosome, Membrane, Transmembrane, Transport, Protein transport, sugar binding protein ; _struct_keywords.pdbx_keywords 'Protein transport, sugar binding protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 16 ? LEU A 26 ? SER A 16 LEU A 26 1 ? 11 HELX_P HELX_P2 2 THR A 27 ? PHE A 30 ? THR A 27 PHE A 30 5 ? 4 HELX_P HELX_P3 3 HIS A 105 ? GLU A 109 ? HIS A 105 GLU A 109 5 ? 5 HELX_P HELX_P4 4 SER A 150 ? CYS A 153 ? SER A 150 CYS A 153 5 ? 4 HELX_P HELX_P5 5 SER B 16 ? LEU B 26 ? SER B 16 LEU B 26 1 ? 11 HELX_P HELX_P6 6 THR B 27 ? PHE B 30 ? THR B 27 PHE B 30 5 ? 4 HELX_P HELX_P7 7 HIS B 105 ? GLU B 109 ? HIS B 105 GLU B 109 5 ? 5 HELX_P HELX_P8 8 SER B 150 ? CYS B 153 ? SER B 150 CYS B 153 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 52 SG ? ? A CYS 6 A CYS 52 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 106 SG ? ? ? 1_555 A CYS 141 SG ? ? A CYS 106 A CYS 141 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 119 SG ? ? ? 1_555 A CYS 153 SG ? ? A CYS 119 A CYS 153 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? B CYS 6 SG ? ? ? 1_555 B CYS 52 SG ? ? B CYS 6 B CYS 52 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? B CYS 106 SG ? ? ? 1_555 B CYS 141 SG ? ? B CYS 106 B CYS 141 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf6 disulf ? ? B CYS 119 SG ? ? ? 1_555 B CYS 153 SG ? ? B CYS 119 B CYS 153 1_555 ? ? ? ? ? ? ? 2.038 ? ? covale1 covale one ? A ASN 81 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 81 A NAG 3001 1_555 ? ? ? ? ? ? ? 1.450 ? N-Glycosylation covale2 covale one ? B ASN 81 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 81 B NAG 4001 1_555 ? ? ? ? ? ? ? 1.458 ? N-Glycosylation metalc1 metalc ? ? A ASP 103 OD2 ? ? ? 1_555 D MN . MN ? ? A ASP 103 A MN 503 1_555 ? ? ? ? ? ? ? 2.244 ? ? metalc2 metalc ? ? E M6D . O3P ? ? ? 1_555 D MN . MN ? ? A M6D 500 A MN 503 1_555 ? ? ? ? ? ? ? 2.247 ? ? metalc3 metalc ? ? D MN . MN ? ? ? 1_555 I HOH . O ? ? A MN 503 A HOH 586 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc4 metalc ? ? D MN . MN ? ? ? 1_555 I HOH . O ? ? A MN 503 A HOH 662 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc5 metalc ? ? D MN . MN ? ? ? 1_555 I HOH . O ? ? A MN 503 A HOH 706 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc6 metalc ? ? B ASP 103 OD2 ? ? ? 1_555 G MN . MN ? ? B ASP 103 B MN 502 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc7 metalc ? ? H M6D . O3P ? ? ? 1_555 G MN . MN ? ? B M6D 501 B MN 502 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc8 metalc ? ? G MN . MN ? ? ? 1_555 J HOH . O ? ? B MN 502 B HOH 585 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc9 metalc ? ? G MN . MN ? ? ? 1_555 J HOH . O ? ? B MN 502 B HOH 649 1_555 ? ? ? ? ? ? ? 2.321 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 41 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 41 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 42 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 42 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.00 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 34 ? GLU A 35 ? PHE A 34 GLU A 35 A 2 TYR A 45 ? PHE A 49 ? TYR A 45 PHE A 49 A 3 ALA A 62 ? GLN A 68 ? ALA A 62 GLN A 68 A 4 GLU A 74 ? GLN A 87 ? GLU A 74 GLN A 87 A 5 TRP A 91 ? GLY A 98 ? TRP A 91 GLY A 98 A 6 ALA A 113 ? CYS A 119 ? ALA A 113 CYS A 119 A 7 PHE A 142 ? SER A 149 ? PHE A 142 SER A 149 A 8 ASP A 126 ? GLU A 134 ? ASP A 126 GLU A 134 B 1 PHE B 34 ? VAL B 38 ? PHE B 34 VAL B 38 B 2 TYR B 45 ? PHE B 49 ? TYR B 45 PHE B 49 B 3 ALA B 62 ? GLN B 68 ? ALA B 62 GLN B 68 B 4 GLU B 74 ? GLN B 87 ? GLU B 74 GLN B 87 B 5 TRP B 91 ? GLY B 98 ? TRP B 91 GLY B 98 B 6 ALA B 113 ? CYS B 119 ? ALA B 113 CYS B 119 B 7 PHE B 142 ? SER B 149 ? PHE B 142 SER B 149 B 8 ASP B 126 ? GLU B 134 ? ASP B 126 GLU B 134 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 34 ? N PHE A 34 O PHE A 49 ? O PHE A 49 A 2 3 N SER A 46 ? N SER A 46 O ILE A 67 ? O ILE A 67 A 3 4 N GLY A 63 ? N GLY A 63 O GLY A 78 ? O GLY A 78 A 4 5 N PHE A 86 ? N PHE A 86 O MET A 93 ? O MET A 93 A 5 6 N LEU A 94 ? N LEU A 94 O VAL A 115 ? O VAL A 115 A 6 7 N VAL A 114 ? N VAL A 114 O TYR A 143 ? O TYR A 143 A 7 8 O LEU A 144 ? O LEU A 144 N VAL A 131 ? N VAL A 131 B 1 2 N SER B 36 ? N SER B 36 O TYR B 47 ? O TYR B 47 B 2 3 N SER B 46 ? N SER B 46 O ILE B 67 ? O ILE B 67 B 3 4 N GLY B 63 ? N GLY B 63 O GLY B 78 ? O GLY B 78 B 4 5 N PHE B 86 ? N PHE B 86 O MET B 93 ? O MET B 93 B 5 6 N LEU B 94 ? N LEU B 94 O VAL B 115 ? O VAL B 115 B 6 7 N MET B 116 ? N MET B 116 O PHE B 145 ? O PHE B 145 B 7 8 O LEU B 144 ? O LEU B 144 N SER B 132 ? N SER B 132 # _atom_sites.entry_id 2RL8 _atom_sites.fract_transf_matrix[1][1] 0.010910 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010910 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011754 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 GLU 3 3 ? ? ? A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLN 40 40 ? ? ? A . n A 1 41 SER 41 41 ? ? ? A . n A 1 42 PRO 42 42 ? ? ? A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 CYS 52 52 52 CYS CYS A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 TRP 91 91 91 TRP TRP A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 MET 93 93 93 MET MET A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 HIS 122 122 122 HIS HIS A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 CYS 141 141 141 CYS CYS A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 MET 147 147 147 MET MET A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 CYS 153 153 153 CYS CYS A . n A 1 154 SER 154 154 154 SER SER A . n B 1 1 THR 1 1 ? ? ? B . n B 1 2 GLU 2 2 ? ? ? B . n B 1 3 GLU 3 3 ? ? ? B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 CYS 6 6 6 CYS CYS B . n B 1 7 ASP 7 7 7 ASP ASP B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 LYS 12 12 12 LYS LYS B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 THR 27 27 27 THR THR B . n B 1 28 PRO 28 28 28 PRO PRO B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 PHE 34 34 34 PHE PHE B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 PRO 42 42 42 PRO PRO B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 MET 44 44 44 MET MET B . n B 1 45 TYR 45 45 45 TYR TYR B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 TYR 47 47 47 TYR TYR B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 PHE 49 49 49 PHE PHE B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 CYS 52 52 52 CYS CYS B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 GLY 56 56 56 GLY GLY B . n B 1 57 GLN 57 57 57 GLN GLN B . n B 1 58 HIS 58 58 58 HIS HIS B . n B 1 59 SER 59 59 59 SER SER B . n B 1 60 SER 60 60 60 SER SER B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 ALA 62 62 62 ALA ALA B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 GLN 66 66 66 GLN GLN B . n B 1 67 ILE 67 67 67 ILE ILE B . n B 1 68 GLN 68 68 68 GLN GLN B . n B 1 69 LYS 69 69 69 LYS LYS B . n B 1 70 SER 70 70 70 SER SER B . n B 1 71 ASN 71 71 71 ASN ASN B . n B 1 72 GLY 72 72 72 GLY GLY B . n B 1 73 LYS 73 73 73 LYS LYS B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 THR 75 75 75 THR THR B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 ARG 79 79 79 ARG ARG B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 ASN 81 81 81 ASN ASN B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 THR 83 83 83 THR THR B . n B 1 84 GLN 84 84 84 GLN GLN B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLN 87 87 87 GLN GLN B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 SER 89 89 89 SER SER B . n B 1 90 ASN 90 90 90 ASN ASN B . n B 1 91 TRP 91 91 91 TRP TRP B . n B 1 92 ILE 92 92 92 ILE ILE B . n B 1 93 MET 93 93 93 MET MET B . n B 1 94 LEU 94 94 94 LEU LEU B . n B 1 95 ILE 95 95 95 ILE ILE B . n B 1 96 TYR 96 96 96 TYR TYR B . n B 1 97 LYS 97 97 97 LYS LYS B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 ASP 100 100 100 ASP ASP B . n B 1 101 GLU 101 101 101 GLU GLU B . n B 1 102 TYR 102 102 102 TYR TYR B . n B 1 103 ASP 103 103 103 ASP ASP B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 HIS 105 105 105 HIS HIS B . n B 1 106 CYS 106 106 106 CYS CYS B . n B 1 107 GLY 107 107 107 GLY GLY B . n B 1 108 ARG 108 108 108 ARG ARG B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 GLN 110 110 110 GLN GLN B . n B 1 111 ARG 111 111 111 ARG ARG B . n B 1 112 ARG 112 112 112 ARG ARG B . n B 1 113 ALA 113 113 113 ALA ALA B . n B 1 114 VAL 114 114 114 VAL VAL B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 MET 116 116 116 MET MET B . n B 1 117 ILE 117 117 117 ILE ILE B . n B 1 118 SER 118 118 118 SER SER B . n B 1 119 CYS 119 119 119 CYS CYS B . n B 1 120 ASN 120 120 120 ASN ASN B . n B 1 121 ARG 121 121 121 ARG ARG B . n B 1 122 HIS 122 122 122 HIS HIS B . n B 1 123 THR 123 123 123 THR THR B . n B 1 124 LEU 124 124 124 LEU LEU B . n B 1 125 ALA 125 125 125 ALA ALA B . n B 1 126 ASP 126 126 126 ASP ASP B . n B 1 127 ASN 127 127 127 ASN ASN B . n B 1 128 PHE 128 128 128 PHE PHE B . n B 1 129 ASN 129 129 129 ASN ASN B . n B 1 130 PRO 130 130 130 PRO PRO B . n B 1 131 VAL 131 131 131 VAL VAL B . n B 1 132 SER 132 132 132 SER SER B . n B 1 133 GLU 133 133 133 GLU GLU B . n B 1 134 GLU 134 134 134 GLU GLU B . n B 1 135 ARG 135 135 135 ARG ARG B . n B 1 136 GLY 136 136 136 GLY GLY B . n B 1 137 LYS 137 137 137 LYS LYS B . n B 1 138 VAL 138 138 138 VAL VAL B . n B 1 139 GLN 139 139 139 GLN GLN B . n B 1 140 ASP 140 140 140 ASP ASP B . n B 1 141 CYS 141 141 141 CYS CYS B . n B 1 142 PHE 142 142 142 PHE PHE B . n B 1 143 TYR 143 143 143 TYR TYR B . n B 1 144 LEU 144 144 144 LEU LEU B . n B 1 145 PHE 145 145 145 PHE PHE B . n B 1 146 GLU 146 146 146 GLU GLU B . n B 1 147 MET 147 147 147 MET MET B . n B 1 148 ASP 148 148 148 ASP ASP B . n B 1 149 SER 149 149 149 SER SER B . n B 1 150 SER 150 150 150 SER SER B . n B 1 151 LEU 151 151 151 LEU LEU B . n B 1 152 ALA 152 152 152 ALA ALA B . n B 1 153 CYS 153 153 153 CYS CYS B . n B 1 154 SER 154 154 154 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 3001 3001 NAG NAG A . D 3 MN 1 503 503 MN MN A . E 4 M6D 1 500 500 M6D M6D A . F 2 NAG 1 4001 4001 NAG NAG B . G 3 MN 1 502 502 MN MN B . H 4 M6D 1 501 501 M6D M6D B . I 5 HOH 1 506 506 HOH WAT A . I 5 HOH 2 507 507 HOH WAT A . I 5 HOH 3 511 511 HOH WAT A . I 5 HOH 4 512 512 HOH WAT A . I 5 HOH 5 513 513 HOH WAT A . I 5 HOH 6 516 516 HOH WAT A . I 5 HOH 7 517 517 HOH WAT A . I 5 HOH 8 518 518 HOH WAT A . I 5 HOH 9 521 521 HOH WAT A . I 5 HOH 10 522 522 HOH WAT A . I 5 HOH 11 524 524 HOH WAT A . I 5 HOH 12 526 526 HOH WAT A . I 5 HOH 13 527 527 HOH WAT A . I 5 HOH 14 528 528 HOH WAT A . I 5 HOH 15 531 531 HOH WAT A . I 5 HOH 16 535 535 HOH WAT A . I 5 HOH 17 538 538 HOH WAT A . I 5 HOH 18 539 539 HOH WAT A . I 5 HOH 19 540 540 HOH WAT A . I 5 HOH 20 547 547 HOH WAT A . I 5 HOH 21 548 548 HOH WAT A . I 5 HOH 22 551 551 HOH WAT A . I 5 HOH 23 552 552 HOH WAT A . I 5 HOH 24 554 554 HOH WAT A . I 5 HOH 25 558 558 HOH WAT A . I 5 HOH 26 560 560 HOH WAT A . I 5 HOH 27 564 564 HOH WAT A . I 5 HOH 28 568 568 HOH WAT A . I 5 HOH 29 571 571 HOH WAT A . I 5 HOH 30 574 574 HOH WAT A . I 5 HOH 31 576 576 HOH WAT A . I 5 HOH 32 577 577 HOH WAT A . I 5 HOH 33 578 578 HOH WAT A . I 5 HOH 34 579 579 HOH WAT A . I 5 HOH 35 583 583 HOH WAT A . I 5 HOH 36 586 586 HOH WAT A . I 5 HOH 37 587 587 HOH WAT A . I 5 HOH 38 588 588 HOH WAT A . I 5 HOH 39 589 589 HOH WAT A . I 5 HOH 40 591 591 HOH WAT A . I 5 HOH 41 593 593 HOH WAT A . I 5 HOH 42 594 594 HOH WAT A . I 5 HOH 43 597 597 HOH WAT A . I 5 HOH 44 599 599 HOH WAT A . I 5 HOH 45 601 601 HOH WAT A . I 5 HOH 46 603 603 HOH WAT A . I 5 HOH 47 605 605 HOH WAT A . I 5 HOH 48 606 606 HOH WAT A . I 5 HOH 49 607 607 HOH WAT A . I 5 HOH 50 610 610 HOH WAT A . I 5 HOH 51 611 611 HOH WAT A . I 5 HOH 52 613 613 HOH WAT A . I 5 HOH 53 614 614 HOH WAT A . I 5 HOH 54 618 618 HOH WAT A . I 5 HOH 55 619 619 HOH WAT A . I 5 HOH 56 621 621 HOH WAT A . I 5 HOH 57 623 623 HOH WAT A . I 5 HOH 58 625 625 HOH WAT A . I 5 HOH 59 627 627 HOH WAT A . I 5 HOH 60 628 628 HOH WAT A . I 5 HOH 61 629 629 HOH WAT A . I 5 HOH 62 632 632 HOH WAT A . I 5 HOH 63 634 634 HOH WAT A . I 5 HOH 64 635 635 HOH WAT A . I 5 HOH 65 636 636 HOH WAT A . I 5 HOH 66 640 640 HOH WAT A . I 5 HOH 67 645 645 HOH WAT A . I 5 HOH 68 646 646 HOH WAT A . I 5 HOH 69 647 647 HOH WAT A . I 5 HOH 70 648 648 HOH WAT A . I 5 HOH 71 650 650 HOH WAT A . I 5 HOH 72 651 651 HOH WAT A . I 5 HOH 73 653 653 HOH WAT A . I 5 HOH 74 662 662 HOH WAT A . I 5 HOH 75 663 663 HOH WAT A . I 5 HOH 76 667 667 HOH WAT A . I 5 HOH 77 675 675 HOH WAT A . I 5 HOH 78 676 676 HOH WAT A . I 5 HOH 79 677 677 HOH WAT A . I 5 HOH 80 686 686 HOH WAT A . I 5 HOH 81 689 689 HOH WAT A . I 5 HOH 82 690 690 HOH WAT A . I 5 HOH 83 695 695 HOH WAT A . I 5 HOH 84 697 697 HOH WAT A . I 5 HOH 85 699 699 HOH WAT A . I 5 HOH 86 706 706 HOH WAT A . I 5 HOH 87 709 709 HOH WAT A . I 5 HOH 88 713 713 HOH WAT A . I 5 HOH 89 717 717 HOH WAT A . I 5 HOH 90 718 718 HOH WAT A . I 5 HOH 91 719 719 HOH WAT A . I 5 HOH 92 724 724 HOH WAT A . I 5 HOH 93 726 726 HOH WAT A . I 5 HOH 94 730 730 HOH WAT A . I 5 HOH 95 734 734 HOH WAT A . I 5 HOH 96 744 744 HOH WAT A . I 5 HOH 97 745 745 HOH WAT A . I 5 HOH 98 749 749 HOH WAT A . I 5 HOH 99 750 750 HOH WAT A . I 5 HOH 100 751 751 HOH WAT A . I 5 HOH 101 753 753 HOH WAT A . I 5 HOH 102 754 754 HOH WAT A . I 5 HOH 103 756 756 HOH WAT A . I 5 HOH 104 757 757 HOH WAT A . I 5 HOH 105 760 760 HOH WAT A . I 5 HOH 106 766 766 HOH WAT A . I 5 HOH 107 768 768 HOH WAT A . I 5 HOH 108 769 769 HOH WAT A . I 5 HOH 109 771 771 HOH WAT A . I 5 HOH 110 772 772 HOH WAT A . I 5 HOH 111 774 774 HOH WAT A . I 5 HOH 112 777 777 HOH WAT A . I 5 HOH 113 780 780 HOH WAT A . I 5 HOH 114 784 784 HOH WAT A . I 5 HOH 115 785 785 HOH WAT A . I 5 HOH 116 786 786 HOH WAT A . I 5 HOH 117 787 787 HOH WAT A . I 5 HOH 118 789 789 HOH WAT A . I 5 HOH 119 793 793 HOH WAT A . I 5 HOH 120 794 794 HOH WAT A . I 5 HOH 121 796 796 HOH WAT A . I 5 HOH 122 798 798 HOH WAT A . I 5 HOH 123 799 799 HOH WAT A . I 5 HOH 124 804 804 HOH WAT A . I 5 HOH 125 806 806 HOH WAT A . I 5 HOH 126 808 808 HOH WAT A . I 5 HOH 127 811 811 HOH WAT A . I 5 HOH 128 812 812 HOH WAT A . I 5 HOH 129 815 815 HOH WAT A . I 5 HOH 130 816 816 HOH WAT A . I 5 HOH 131 818 818 HOH WAT A . I 5 HOH 132 819 819 HOH WAT A . I 5 HOH 133 820 820 HOH WAT A . I 5 HOH 134 821 821 HOH WAT A . I 5 HOH 135 822 822 HOH WAT A . I 5 HOH 136 824 824 HOH WAT A . I 5 HOH 137 827 827 HOH WAT A . I 5 HOH 138 830 830 HOH WAT A . I 5 HOH 139 831 831 HOH WAT A . I 5 HOH 140 832 832 HOH WAT A . I 5 HOH 141 833 833 HOH WAT A . I 5 HOH 142 838 838 HOH WAT A . I 5 HOH 143 841 841 HOH WAT A . I 5 HOH 144 846 846 HOH WAT A . I 5 HOH 145 847 847 HOH WAT A . I 5 HOH 146 848 848 HOH WAT A . I 5 HOH 147 851 851 HOH WAT A . I 5 HOH 148 852 852 HOH WAT A . I 5 HOH 149 855 855 HOH WAT A . I 5 HOH 150 856 856 HOH WAT A . I 5 HOH 151 857 857 HOH WAT A . I 5 HOH 152 860 860 HOH WAT A . I 5 HOH 153 872 872 HOH WAT A . I 5 HOH 154 874 874 HOH WAT A . I 5 HOH 155 875 875 HOH WAT A . I 5 HOH 156 878 878 HOH WAT A . I 5 HOH 157 888 888 HOH WAT A . I 5 HOH 158 891 891 HOH WAT A . I 5 HOH 159 896 896 HOH WAT A . I 5 HOH 160 897 897 HOH WAT A . I 5 HOH 161 900 900 HOH WAT A . I 5 HOH 162 902 902 HOH WAT A . I 5 HOH 163 903 903 HOH WAT A . I 5 HOH 164 907 907 HOH WAT A . J 5 HOH 1 504 504 HOH WAT B . J 5 HOH 2 505 505 HOH WAT B . J 5 HOH 3 508 508 HOH WAT B . J 5 HOH 4 509 509 HOH WAT B . J 5 HOH 5 510 510 HOH WAT B . J 5 HOH 6 514 514 HOH WAT B . J 5 HOH 7 515 515 HOH WAT B . J 5 HOH 8 519 519 HOH WAT B . J 5 HOH 9 520 520 HOH WAT B . J 5 HOH 10 523 523 HOH WAT B . J 5 HOH 11 525 525 HOH WAT B . J 5 HOH 12 529 529 HOH WAT B . J 5 HOH 13 530 530 HOH WAT B . J 5 HOH 14 532 532 HOH WAT B . J 5 HOH 15 533 533 HOH WAT B . J 5 HOH 16 534 534 HOH WAT B . J 5 HOH 17 536 536 HOH WAT B . J 5 HOH 18 537 537 HOH WAT B . J 5 HOH 19 541 541 HOH WAT B . J 5 HOH 20 542 542 HOH WAT B . J 5 HOH 21 543 543 HOH WAT B . J 5 HOH 22 544 544 HOH WAT B . J 5 HOH 23 546 546 HOH WAT B . J 5 HOH 24 549 549 HOH WAT B . J 5 HOH 25 550 550 HOH WAT B . J 5 HOH 26 553 553 HOH WAT B . J 5 HOH 27 555 555 HOH WAT B . J 5 HOH 28 556 556 HOH WAT B . J 5 HOH 29 557 557 HOH WAT B . J 5 HOH 30 559 559 HOH WAT B . J 5 HOH 31 561 561 HOH WAT B . J 5 HOH 32 562 562 HOH WAT B . J 5 HOH 33 563 563 HOH WAT B . J 5 HOH 34 565 565 HOH WAT B . J 5 HOH 35 566 566 HOH WAT B . J 5 HOH 36 567 567 HOH WAT B . J 5 HOH 37 570 570 HOH WAT B . J 5 HOH 38 572 572 HOH WAT B . J 5 HOH 39 573 573 HOH WAT B . J 5 HOH 40 575 575 HOH WAT B . J 5 HOH 41 580 580 HOH WAT B . J 5 HOH 42 581 581 HOH WAT B . J 5 HOH 43 582 582 HOH WAT B . J 5 HOH 44 584 584 HOH WAT B . J 5 HOH 45 585 585 HOH WAT B . J 5 HOH 46 590 590 HOH WAT B . J 5 HOH 47 592 592 HOH WAT B . J 5 HOH 48 595 595 HOH WAT B . J 5 HOH 49 598 598 HOH WAT B . J 5 HOH 50 600 600 HOH WAT B . J 5 HOH 51 604 604 HOH WAT B . J 5 HOH 52 608 608 HOH WAT B . J 5 HOH 53 609 609 HOH WAT B . J 5 HOH 54 612 612 HOH WAT B . J 5 HOH 55 615 615 HOH WAT B . J 5 HOH 56 617 617 HOH WAT B . J 5 HOH 57 620 620 HOH WAT B . J 5 HOH 58 622 622 HOH WAT B . J 5 HOH 59 624 624 HOH WAT B . J 5 HOH 60 630 630 HOH WAT B . J 5 HOH 61 631 631 HOH WAT B . J 5 HOH 62 637 637 HOH WAT B . J 5 HOH 63 638 638 HOH WAT B . J 5 HOH 64 639 639 HOH WAT B . J 5 HOH 65 641 641 HOH WAT B . J 5 HOH 66 642 642 HOH WAT B . J 5 HOH 67 643 643 HOH WAT B . J 5 HOH 68 644 644 HOH WAT B . J 5 HOH 69 649 649 HOH WAT B . J 5 HOH 70 652 652 HOH WAT B . J 5 HOH 71 654 654 HOH WAT B . J 5 HOH 72 655 655 HOH WAT B . J 5 HOH 73 656 656 HOH WAT B . J 5 HOH 74 657 657 HOH WAT B . J 5 HOH 75 659 659 HOH WAT B . J 5 HOH 76 660 660 HOH WAT B . J 5 HOH 77 661 661 HOH WAT B . J 5 HOH 78 664 664 HOH WAT B . J 5 HOH 79 665 665 HOH WAT B . J 5 HOH 80 666 666 HOH WAT B . J 5 HOH 81 668 668 HOH WAT B . J 5 HOH 82 669 669 HOH WAT B . J 5 HOH 83 670 670 HOH WAT B . J 5 HOH 84 671 671 HOH WAT B . J 5 HOH 85 673 673 HOH WAT B . J 5 HOH 86 674 674 HOH WAT B . J 5 HOH 87 678 678 HOH WAT B . J 5 HOH 88 679 679 HOH WAT B . J 5 HOH 89 680 680 HOH WAT B . J 5 HOH 90 683 683 HOH WAT B . J 5 HOH 91 685 685 HOH WAT B . J 5 HOH 92 687 687 HOH WAT B . J 5 HOH 93 688 688 HOH WAT B . J 5 HOH 94 691 691 HOH WAT B . J 5 HOH 95 692 692 HOH WAT B . J 5 HOH 96 693 693 HOH WAT B . J 5 HOH 97 696 696 HOH WAT B . J 5 HOH 98 698 698 HOH WAT B . J 5 HOH 99 700 700 HOH WAT B . J 5 HOH 100 701 701 HOH WAT B . J 5 HOH 101 702 702 HOH WAT B . J 5 HOH 102 705 705 HOH WAT B . J 5 HOH 103 707 707 HOH WAT B . J 5 HOH 104 708 708 HOH WAT B . J 5 HOH 105 710 710 HOH WAT B . J 5 HOH 106 711 711 HOH WAT B . J 5 HOH 107 712 712 HOH WAT B . J 5 HOH 108 714 714 HOH WAT B . J 5 HOH 109 715 715 HOH WAT B . J 5 HOH 110 725 725 HOH WAT B . J 5 HOH 111 727 727 HOH WAT B . J 5 HOH 112 728 728 HOH WAT B . J 5 HOH 113 731 731 HOH WAT B . J 5 HOH 114 733 733 HOH WAT B . J 5 HOH 115 736 736 HOH WAT B . J 5 HOH 116 742 742 HOH WAT B . J 5 HOH 117 755 755 HOH WAT B . J 5 HOH 118 758 758 HOH WAT B . J 5 HOH 119 761 761 HOH WAT B . J 5 HOH 120 762 762 HOH WAT B . J 5 HOH 121 763 763 HOH WAT B . J 5 HOH 122 764 764 HOH WAT B . J 5 HOH 123 770 770 HOH WAT B . J 5 HOH 124 775 775 HOH WAT B . J 5 HOH 125 776 776 HOH WAT B . J 5 HOH 126 778 778 HOH WAT B . J 5 HOH 127 779 779 HOH WAT B . J 5 HOH 128 781 781 HOH WAT B . J 5 HOH 129 782 782 HOH WAT B . J 5 HOH 130 783 783 HOH WAT B . J 5 HOH 131 791 791 HOH WAT B . J 5 HOH 132 792 792 HOH WAT B . J 5 HOH 133 795 795 HOH WAT B . J 5 HOH 134 797 797 HOH WAT B . J 5 HOH 135 800 800 HOH WAT B . J 5 HOH 136 801 801 HOH WAT B . J 5 HOH 137 802 802 HOH WAT B . J 5 HOH 138 803 803 HOH WAT B . J 5 HOH 139 805 805 HOH WAT B . J 5 HOH 140 807 807 HOH WAT B . J 5 HOH 141 809 809 HOH WAT B . J 5 HOH 142 810 810 HOH WAT B . J 5 HOH 143 813 813 HOH WAT B . J 5 HOH 144 814 814 HOH WAT B . J 5 HOH 145 817 817 HOH WAT B . J 5 HOH 146 823 823 HOH WAT B . J 5 HOH 147 826 826 HOH WAT B . J 5 HOH 148 828 828 HOH WAT B . J 5 HOH 149 829 829 HOH WAT B . J 5 HOH 150 835 835 HOH WAT B . J 5 HOH 151 837 837 HOH WAT B . J 5 HOH 152 839 839 HOH WAT B . J 5 HOH 153 840 840 HOH WAT B . J 5 HOH 154 842 842 HOH WAT B . J 5 HOH 155 843 843 HOH WAT B . J 5 HOH 156 844 844 HOH WAT B . J 5 HOH 157 845 845 HOH WAT B . J 5 HOH 158 849 849 HOH WAT B . J 5 HOH 159 850 850 HOH WAT B . J 5 HOH 160 858 858 HOH WAT B . J 5 HOH 161 859 859 HOH WAT B . J 5 HOH 162 863 863 HOH WAT B . J 5 HOH 163 865 865 HOH WAT B . J 5 HOH 164 867 867 HOH WAT B . J 5 HOH 165 869 869 HOH WAT B . J 5 HOH 166 871 871 HOH WAT B . J 5 HOH 167 873 873 HOH WAT B . J 5 HOH 168 876 876 HOH WAT B . J 5 HOH 169 879 879 HOH WAT B . J 5 HOH 170 880 880 HOH WAT B . J 5 HOH 171 882 882 HOH WAT B . J 5 HOH 172 883 883 HOH WAT B . J 5 HOH 173 884 884 HOH WAT B . J 5 HOH 174 885 885 HOH WAT B . J 5 HOH 175 886 886 HOH WAT B . J 5 HOH 176 887 887 HOH WAT B . J 5 HOH 177 893 893 HOH WAT B . J 5 HOH 178 894 894 HOH WAT B . J 5 HOH 179 901 901 HOH WAT B . J 5 HOH 180 905 905 HOH WAT B . J 5 HOH 181 906 906 HOH WAT B . J 5 HOH 182 911 911 HOH WAT B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 81 A ASN 81 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 81 B ASN 81 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 3910 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 103 ? A ASP 103 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O3P ? E M6D . ? A M6D 500 ? 1_555 106.3 ? 2 OD2 ? A ASP 103 ? A ASP 103 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 586 ? 1_555 84.8 ? 3 O3P ? E M6D . ? A M6D 500 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 586 ? 1_555 168.9 ? 4 OD2 ? A ASP 103 ? A ASP 103 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 662 ? 1_555 84.5 ? 5 O3P ? E M6D . ? A M6D 500 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 662 ? 1_555 87.2 ? 6 O ? I HOH . ? A HOH 586 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 662 ? 1_555 94.6 ? 7 OD2 ? A ASP 103 ? A ASP 103 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 706 ? 1_555 89.7 ? 8 O3P ? E M6D . ? A M6D 500 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 706 ? 1_555 90.2 ? 9 O ? I HOH . ? A HOH 586 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 706 ? 1_555 89.3 ? 10 O ? I HOH . ? A HOH 662 ? 1_555 MN ? D MN . ? A MN 503 ? 1_555 O ? I HOH . ? A HOH 706 ? 1_555 172.7 ? 11 OD2 ? B ASP 103 ? B ASP 103 ? 1_555 MN ? G MN . ? B MN 502 ? 1_555 O3P ? H M6D . ? B M6D 501 ? 1_555 96.7 ? 12 OD2 ? B ASP 103 ? B ASP 103 ? 1_555 MN ? G MN . ? B MN 502 ? 1_555 O ? J HOH . ? B HOH 585 ? 1_555 97.8 ? 13 O3P ? H M6D . ? B M6D 501 ? 1_555 MN ? G MN . ? B MN 502 ? 1_555 O ? J HOH . ? B HOH 585 ? 1_555 92.6 ? 14 OD2 ? B ASP 103 ? B ASP 103 ? 1_555 MN ? G MN . ? B MN 502 ? 1_555 O ? J HOH . ? B HOH 649 ? 1_555 87.5 ? 15 O3P ? H M6D . ? B M6D 501 ? 1_555 MN ? G MN . ? B MN 502 ? 1_555 O ? J HOH . ? B HOH 649 ? 1_555 170.9 ? 16 O ? J HOH . ? B HOH 585 ? 1_555 MN ? G MN . ? B MN 502 ? 1_555 O ? J HOH . ? B HOH 649 ? 1_555 78.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2021-10-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site 9 4 'Structure model' struct_site_gen 10 5 'Structure model' chem_comp 11 5 'Structure model' database_2 12 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.mon_nstd_flag' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_chem_comp.type' 4 4 'Structure model' '_entity.pdbx_description' 5 4 'Structure model' '_pdbx_entity_nonpoly.name' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.value' 17 4 'Structure model' '_struct_conn.conn_type_id' 18 4 'Structure model' '_struct_conn.id' 19 4 'Structure model' '_struct_conn.pdbx_dist_value' 20 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 21 4 'Structure model' '_struct_conn.pdbx_role' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 5 'Structure model' '_chem_comp.pdbx_synonyms' 36 5 'Structure model' '_database_2.pdbx_DOI' 37 5 'Structure model' '_database_2.pdbx_database_accession' 38 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 3 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 37 ? ? -114.42 -164.71 2 1 VAL A 38 ? ? 98.13 -8.28 3 1 MET A 44 ? ? 90.37 -38.87 4 1 ALA A 125 ? ? 177.54 128.25 5 1 ASP A 126 ? ? -173.21 -176.02 6 1 SER B 59 ? ? -65.30 73.58 7 1 ASN B 90 ? ? -144.72 30.65 8 1 ALA B 125 ? ? -175.63 126.51 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 1 ? A THR 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A GLU 3 ? A GLU 3 4 1 Y 1 A GLN 40 ? A GLN 40 5 1 Y 1 A SER 41 ? A SER 41 6 1 Y 1 A PRO 42 ? A PRO 42 7 1 Y 1 B THR 1 ? B THR 1 8 1 Y 1 B GLU 2 ? B GLU 2 9 1 Y 1 B GLU 3 ? B GLU 3 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M6D 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp6PO3 NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 'MANGANESE (II) ION' MN 4 6-O-phosphono-beta-D-mannopyranose M6D 5 water HOH #