data_2VI6 # _entry.id 2VI6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VI6 pdb_00002vi6 10.2210/pdb2vi6/pdb PDBE EBI-34590 ? ? WWPDB D_1290034590 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VI6 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-11-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jauch, R.' 1 'Ng, C.K.L.' 2 'Saitakendu, K.S.' 3 'Stevens, R.C.' 4 'Kolatkar, P.R.' 5 # _citation.id primary _citation.title 'Crystal Structure and DNA Binding of the Homeodomain of the Stem Cell Transcription Factor Nanog.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 376 _citation.page_first 758 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18177668 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2007.11.091 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jauch, R.' 1 ? primary 'Ng, C.K.L.' 2 ? primary 'Saitakendu, K.S.' 3 ? primary 'Stevens, R.C.' 4 ? primary 'Kolatkar, P.R.' 5 ? # _cell.entry_id 2VI6 _cell.length_a 105.318 _cell.length_b 114.771 _cell.length_c 62.771 _cell.angle_alpha 90.00 _cell.angle_beta 98.68 _cell.angle_gamma 90.00 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VI6 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HOMEOBOX PROTEIN NANOG' 7600.954 8 ? ? 'HOMEODOMAIN, RESIDUES 96-155' ? 2 water nat water 18.015 69 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;HOMEOBOX TRANSCRIPTION FACTOR NANOG, EARLY EMBRYO SPECIFIC EXPRESSION NK-TYPE HOMEOBOX PROTEIN, ES CELL- ASSOCIATED PROTEIN 4, NANOG ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GTKQKMRTVFSQAQLCALKDRFQKQKYLSLQQMQELSSILNLSYKQVKTWFQNQRMKCKRWQ _entity_poly.pdbx_seq_one_letter_code_can GTKQKMRTVFSQAQLCALKDRFQKQKYLSLQQMQELSSILNLSYKQVKTWFQNQRMKCKRWQ _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 THR n 1 3 LYS n 1 4 GLN n 1 5 LYS n 1 6 MET n 1 7 ARG n 1 8 THR n 1 9 VAL n 1 10 PHE n 1 11 SER n 1 12 GLN n 1 13 ALA n 1 14 GLN n 1 15 LEU n 1 16 CYS n 1 17 ALA n 1 18 LEU n 1 19 LYS n 1 20 ASP n 1 21 ARG n 1 22 PHE n 1 23 GLN n 1 24 LYS n 1 25 GLN n 1 26 LYS n 1 27 TYR n 1 28 LEU n 1 29 SER n 1 30 LEU n 1 31 GLN n 1 32 GLN n 1 33 MET n 1 34 GLN n 1 35 GLU n 1 36 LEU n 1 37 SER n 1 38 SER n 1 39 ILE n 1 40 LEU n 1 41 ASN n 1 42 LEU n 1 43 SER n 1 44 TYR n 1 45 LYS n 1 46 GLN n 1 47 VAL n 1 48 LYS n 1 49 THR n 1 50 TRP n 1 51 PHE n 1 52 GLN n 1 53 ASN n 1 54 GLN n 1 55 ARG n 1 56 MET n 1 57 LYS n 1 58 CYS n 1 59 LYS n 1 60 ARG n 1 61 TRP n 1 62 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name MOUSE _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'MUS MUSCULUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETG60A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2VI6 1 ? ? 2VI6 ? 2 UNP NANOG_MOUSE 1 ? ? Q80Z64 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VI6 A 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 2 2 2VI6 A 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 3 1 2VI6 B 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 4 2 2VI6 B 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 5 1 2VI6 C 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 6 2 2VI6 C 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 7 1 2VI6 D 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 8 2 2VI6 D 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 9 1 2VI6 E 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 10 2 2VI6 E 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 11 1 2VI6 F 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 12 2 2VI6 F 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 13 1 2VI6 G 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 14 2 2VI6 G 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 15 1 2VI6 H 1 ? 2 ? 2VI6 -1 ? 0 ? -1 0 16 2 2VI6 H 3 ? 62 ? Q80Z64 96 ? 155 ? 1 60 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VI6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.09 _exptl_crystal.density_percent_sol 60.2 _exptl_crystal.description 'DNA REMOVED FROM STARTING MODEL' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PEG3350, pH 7' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2007-04-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength 0.97934 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VI6 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.60 _reflns.number_obs 20786 _reflns.number_all ? _reflns.percent_possible_obs 91.0 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.40 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.64 _reflns_shell.percent_possible_all 68.9 _reflns_shell.Rmerge_I_obs 0.52 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.40 _reflns_shell.pdbx_redundancy 2.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VI6 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 19601 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 90.8 _refine.ls_R_factor_obs 0.223 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.221 _refine.ls_R_factor_R_free 0.265 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1040 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.929 _refine.correlation_coeff_Fo_to_Fc_free 0.908 _refine.B_iso_mean 52.73 _refine.aniso_B[1][1] -2.24000 _refine.aniso_B[2][2] -2.70000 _refine.aniso_B[3][3] 4.26000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -2.23000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. FIRST 7 N-TERMINAL RESIDUES DISORDERED' _refine.pdbx_starting_model 'PDB ENTRY 1IG7' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.571 _refine.pdbx_overall_ESU_R_Free 0.320 _refine.overall_SU_ML 0.242 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 23.396 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3763 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 69 _refine_hist.number_atoms_total 3832 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 3831 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.193 1.930 ? 5106 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.777 5.000 ? 429 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.908 24.800 ? 200 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.611 15.000 ? 829 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.873 15.000 ? 24 'X-RAY DIFFRACTION' ? r_chiral_restr 0.079 0.200 ? 530 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 2772 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.207 0.200 ? 1560 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.298 0.200 ? 2605 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.140 0.200 ? 108 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.399 0.200 ? 55 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.188 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.485 1.500 ? 2250 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.878 2.000 ? 3493 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.231 3.000 ? 1846 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.971 4.500 ? 1613 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.67 _refine_ls_shell.number_reflns_R_work 1094 _refine_ls_shell.R_factor_R_work 0.3600 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3980 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 63 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 0.296178 -0.828859 -0.474628 0.831273 -0.021035 0.555467 -0.470387 -0.559062 0.682778 77.89930 -23.23910 70.59430 2 given ? -0.725684 -0.446251 0.523682 0.686929 -0.426914 0.588110 -0.038878 0.786515 0.616347 48.65920 25.07290 -33.87040 3 given ? 0.850005 0.219070 -0.479061 0.362741 -0.902871 0.230743 -0.381982 -0.369908 -0.846911 30.68910 70.12920 128.11620 4 given ? 0.036894 -0.324991 -0.944997 -0.321237 0.891594 -0.319167 0.946280 0.315343 -0.071504 116.26940 0.81160 2.14290 5 given ? -0.312064 0.790285 0.527319 0.869375 0.013697 0.493963 0.383149 0.612587 -0.691328 -67.53470 8.90670 36.70580 6 given ? -0.301956 0.494814 0.814851 -0.737174 0.420785 -0.528692 -0.604481 -0.760328 0.237705 -27.27450 38.72190 84.25030 7 given ? -0.320536 0.054304 -0.945679 -0.017064 -0.998524 -0.051555 -0.947083 -0.000388 0.320990 52.25640 123.90300 42.43740 # _struct.entry_id 2VI6 _struct.title 'Crystal Structure of the Nanog Homeodomain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VI6 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;HOMEODOMAIN, DNA-BINDING, TRANSCRIPTION, TRANSCRIPTION FACTOR, DEVELOPMENTAL PROTEIN, TRANSCRIPTION REGULATION, NANOG, NUCLEUS, HOMEOBOX, ACTIVATOR, REPRESSOR ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 11 ? GLN A 25 ? SER A 9 GLN A 23 1 ? 15 HELX_P HELX_P2 2 SER A 29 ? ASN A 41 ? SER A 27 ASN A 39 1 ? 13 HELX_P HELX_P3 3 SER A 43 ? LYS A 57 ? SER A 41 LYS A 55 1 ? 15 HELX_P HELX_P4 4 CYS A 58 ? GLN A 62 ? CYS A 56 GLN A 60 5 ? 5 HELX_P HELX_P5 5 SER B 11 ? GLN B 25 ? SER B 9 GLN B 23 1 ? 15 HELX_P HELX_P6 6 SER B 29 ? ASN B 41 ? SER B 27 ASN B 39 1 ? 13 HELX_P HELX_P7 7 SER B 43 ? MET B 56 ? SER B 41 MET B 54 1 ? 14 HELX_P HELX_P8 8 LYS B 57 ? GLN B 62 ? LYS B 55 GLN B 60 5 ? 6 HELX_P HELX_P9 9 SER C 11 ? GLN C 25 ? SER C 9 GLN C 23 1 ? 15 HELX_P HELX_P10 10 SER C 29 ? ASN C 41 ? SER C 27 ASN C 39 1 ? 13 HELX_P HELX_P11 11 SER C 43 ? MET C 56 ? SER C 41 MET C 54 1 ? 14 HELX_P HELX_P12 12 LYS C 57 ? GLN C 62 ? LYS C 55 GLN C 60 5 ? 6 HELX_P HELX_P13 13 SER D 11 ? GLN D 23 ? SER D 9 GLN D 21 1 ? 13 HELX_P HELX_P14 14 SER D 29 ? ASN D 41 ? SER D 27 ASN D 39 1 ? 13 HELX_P HELX_P15 15 SER D 43 ? CYS D 58 ? SER D 41 CYS D 56 1 ? 16 HELX_P HELX_P16 16 LYS D 59 ? GLN D 62 ? LYS D 57 GLN D 60 5 ? 4 HELX_P HELX_P17 17 SER E 11 ? GLN E 23 ? SER E 9 GLN E 21 1 ? 13 HELX_P HELX_P18 18 SER E 29 ? LEU E 40 ? SER E 27 LEU E 38 1 ? 12 HELX_P HELX_P19 19 SER E 43 ? LYS E 57 ? SER E 41 LYS E 55 1 ? 15 HELX_P HELX_P20 20 CYS E 58 ? GLN E 62 ? CYS E 56 GLN E 60 5 ? 5 HELX_P HELX_P21 21 SER F 11 ? GLN F 25 ? SER F 9 GLN F 23 1 ? 15 HELX_P HELX_P22 22 SER F 29 ? ASN F 41 ? SER F 27 ASN F 39 1 ? 13 HELX_P HELX_P23 23 SER F 43 ? LYS F 57 ? SER F 41 LYS F 55 1 ? 15 HELX_P HELX_P24 24 CYS F 58 ? GLN F 62 ? CYS F 56 GLN F 60 5 ? 5 HELX_P HELX_P25 25 SER G 11 ? GLN G 25 ? SER G 9 GLN G 23 1 ? 15 HELX_P HELX_P26 26 SER G 29 ? ASN G 41 ? SER G 27 ASN G 39 1 ? 13 HELX_P HELX_P27 27 SER G 43 ? MET G 56 ? SER G 41 MET G 54 1 ? 14 HELX_P HELX_P28 28 LYS G 57 ? GLN G 62 ? LYS G 55 GLN G 60 5 ? 6 HELX_P HELX_P29 29 SER H 11 ? GLN H 23 ? SER H 9 GLN H 21 1 ? 13 HELX_P HELX_P30 30 SER H 29 ? ASN H 41 ? SER H 27 ASN H 39 1 ? 13 HELX_P HELX_P31 31 SER H 43 ? CYS H 58 ? SER H 41 CYS H 56 1 ? 16 HELX_P HELX_P32 32 LYS H 59 ? GLN H 62 ? LYS H 57 GLN H 60 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 16 SG ? ? ? 1_555 H CYS 58 SG ? ? A CYS 14 H CYS 56 4_546 ? ? ? ? ? ? ? 2.548 ? ? disulf2 disulf ? ? A CYS 58 SG ? ? ? 1_555 H CYS 16 SG ? ? A CYS 56 H CYS 14 4_546 ? ? ? ? ? ? ? 2.741 ? ? disulf3 disulf ? ? B CYS 16 SG ? ? ? 1_555 B CYS 58 SG ? ? B CYS 14 B CYS 56 2_656 ? ? ? ? ? ? ? 2.636 ? ? disulf4 disulf ? ? C CYS 16 SG ? ? ? 1_555 G CYS 58 SG ? ? C CYS 14 G CYS 56 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf5 disulf ? ? C CYS 58 SG ? ? ? 1_555 G CYS 16 SG ? ? C CYS 56 G CYS 14 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf6 disulf ? ? D CYS 16 SG ? ? ? 1_555 E CYS 58 SG ? ? D CYS 14 E CYS 56 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf7 disulf ? ? D CYS 58 SG ? ? ? 1_555 E CYS 16 SG ? ? D CYS 56 E CYS 14 1_555 ? ? ? ? ? ? ? 2.024 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2VI6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VI6 _atom_sites.fract_transf_matrix[1][1] 0.009495 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001450 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008713 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016115 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 THR 2 0 ? ? ? A . n A 1 3 LYS 3 1 ? ? ? A . n A 1 4 GLN 4 2 ? ? ? A . n A 1 5 LYS 5 3 ? ? ? A . n A 1 6 MET 6 4 ? ? ? A . n A 1 7 ARG 7 5 ? ? ? A . n A 1 8 THR 8 6 6 THR THR A . n A 1 9 VAL 9 7 7 VAL VAL A . n A 1 10 PHE 10 8 8 PHE PHE A . n A 1 11 SER 11 9 9 SER SER A . n A 1 12 GLN 12 10 10 GLN GLN A . n A 1 13 ALA 13 11 11 ALA ALA A . n A 1 14 GLN 14 12 12 GLN GLN A . n A 1 15 LEU 15 13 13 LEU LEU A . n A 1 16 CYS 16 14 14 CYS CYS A . n A 1 17 ALA 17 15 15 ALA ALA A . n A 1 18 LEU 18 16 16 LEU LEU A . n A 1 19 LYS 19 17 17 LYS LYS A . n A 1 20 ASP 20 18 18 ASP ASP A . n A 1 21 ARG 21 19 19 ARG ARG A . n A 1 22 PHE 22 20 20 PHE PHE A . n A 1 23 GLN 23 21 21 GLN GLN A . n A 1 24 LYS 24 22 22 LYS LYS A . n A 1 25 GLN 25 23 23 GLN GLN A . n A 1 26 LYS 26 24 24 LYS LYS A . n A 1 27 TYR 27 25 25 TYR TYR A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 SER 29 27 27 SER SER A . n A 1 30 LEU 30 28 28 LEU LEU A . n A 1 31 GLN 31 29 29 GLN GLN A . n A 1 32 GLN 32 30 30 GLN GLN A . n A 1 33 MET 33 31 31 MET MET A . n A 1 34 GLN 34 32 32 GLN GLN A . n A 1 35 GLU 35 33 33 GLU GLU A . n A 1 36 LEU 36 34 34 LEU LEU A . n A 1 37 SER 37 35 35 SER SER A . n A 1 38 SER 38 36 36 SER SER A . n A 1 39 ILE 39 37 37 ILE ILE A . n A 1 40 LEU 40 38 38 LEU LEU A . n A 1 41 ASN 41 39 39 ASN ASN A . n A 1 42 LEU 42 40 40 LEU LEU A . n A 1 43 SER 43 41 41 SER SER A . n A 1 44 TYR 44 42 42 TYR TYR A . n A 1 45 LYS 45 43 43 LYS LYS A . n A 1 46 GLN 46 44 44 GLN GLN A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 LYS 48 46 46 LYS LYS A . n A 1 49 THR 49 47 47 THR THR A . n A 1 50 TRP 50 48 48 TRP TRP A . n A 1 51 PHE 51 49 49 PHE PHE A . n A 1 52 GLN 52 50 50 GLN GLN A . n A 1 53 ASN 53 51 51 ASN ASN A . n A 1 54 GLN 54 52 52 GLN GLN A . n A 1 55 ARG 55 53 53 ARG ARG A . n A 1 56 MET 56 54 54 MET MET A . n A 1 57 LYS 57 55 55 LYS LYS A . n A 1 58 CYS 58 56 56 CYS CYS A . n A 1 59 LYS 59 57 57 LYS LYS A . n A 1 60 ARG 60 58 58 ARG ARG A . n A 1 61 TRP 61 59 59 TRP TRP A . n A 1 62 GLN 62 60 60 GLN GLN A . n B 1 1 GLY 1 -1 ? ? ? B . n B 1 2 THR 2 0 ? ? ? B . n B 1 3 LYS 3 1 ? ? ? B . n B 1 4 GLN 4 2 ? ? ? B . n B 1 5 LYS 5 3 ? ? ? B . n B 1 6 MET 6 4 ? ? ? B . n B 1 7 ARG 7 5 ? ? ? B . n B 1 8 THR 8 6 ? ? ? B . n B 1 9 VAL 9 7 7 VAL VAL B . n B 1 10 PHE 10 8 8 PHE PHE B . n B 1 11 SER 11 9 9 SER SER B . n B 1 12 GLN 12 10 10 GLN GLN B . n B 1 13 ALA 13 11 11 ALA ALA B . n B 1 14 GLN 14 12 12 GLN GLN B . n B 1 15 LEU 15 13 13 LEU LEU B . n B 1 16 CYS 16 14 14 CYS CYS B . n B 1 17 ALA 17 15 15 ALA ALA B . n B 1 18 LEU 18 16 16 LEU LEU B . n B 1 19 LYS 19 17 17 LYS LYS B . n B 1 20 ASP 20 18 18 ASP ASP B . n B 1 21 ARG 21 19 19 ARG ARG B . n B 1 22 PHE 22 20 20 PHE PHE B . n B 1 23 GLN 23 21 21 GLN GLN B . n B 1 24 LYS 24 22 22 LYS LYS B . n B 1 25 GLN 25 23 23 GLN GLN B . n B 1 26 LYS 26 24 24 LYS LYS B . n B 1 27 TYR 27 25 25 TYR TYR B . n B 1 28 LEU 28 26 26 LEU LEU B . n B 1 29 SER 29 27 27 SER SER B . n B 1 30 LEU 30 28 28 LEU LEU B . n B 1 31 GLN 31 29 29 GLN GLN B . n B 1 32 GLN 32 30 30 GLN GLN B . n B 1 33 MET 33 31 31 MET MET B . n B 1 34 GLN 34 32 32 GLN GLN B . n B 1 35 GLU 35 33 33 GLU GLU B . n B 1 36 LEU 36 34 34 LEU LEU B . n B 1 37 SER 37 35 35 SER SER B . n B 1 38 SER 38 36 36 SER SER B . n B 1 39 ILE 39 37 37 ILE ILE B . n B 1 40 LEU 40 38 38 LEU LEU B . n B 1 41 ASN 41 39 39 ASN ASN B . n B 1 42 LEU 42 40 40 LEU LEU B . n B 1 43 SER 43 41 41 SER SER B . n B 1 44 TYR 44 42 42 TYR TYR B . n B 1 45 LYS 45 43 43 LYS LYS B . n B 1 46 GLN 46 44 44 GLN GLN B . n B 1 47 VAL 47 45 45 VAL VAL B . n B 1 48 LYS 48 46 46 LYS LYS B . n B 1 49 THR 49 47 47 THR THR B . n B 1 50 TRP 50 48 48 TRP TRP B . n B 1 51 PHE 51 49 49 PHE PHE B . n B 1 52 GLN 52 50 50 GLN GLN B . n B 1 53 ASN 53 51 51 ASN ASN B . n B 1 54 GLN 54 52 52 GLN GLN B . n B 1 55 ARG 55 53 53 ARG ARG B . n B 1 56 MET 56 54 54 MET MET B . n B 1 57 LYS 57 55 55 LYS LYS B . n B 1 58 CYS 58 56 56 CYS CYS B . n B 1 59 LYS 59 57 57 LYS LYS B . n B 1 60 ARG 60 58 58 ARG ARG B . n B 1 61 TRP 61 59 59 TRP TRP B . n B 1 62 GLN 62 60 60 GLN GLN B . n C 1 1 GLY 1 -1 ? ? ? C . n C 1 2 THR 2 0 ? ? ? C . n C 1 3 LYS 3 1 ? ? ? C . n C 1 4 GLN 4 2 ? ? ? C . n C 1 5 LYS 5 3 ? ? ? C . n C 1 6 MET 6 4 ? ? ? C . n C 1 7 ARG 7 5 ? ? ? C . n C 1 8 THR 8 6 6 THR THR C . n C 1 9 VAL 9 7 7 VAL VAL C . n C 1 10 PHE 10 8 8 PHE PHE C . n C 1 11 SER 11 9 9 SER SER C . n C 1 12 GLN 12 10 10 GLN GLN C . n C 1 13 ALA 13 11 11 ALA ALA C . n C 1 14 GLN 14 12 12 GLN GLN C . n C 1 15 LEU 15 13 13 LEU LEU C . n C 1 16 CYS 16 14 14 CYS CYS C . n C 1 17 ALA 17 15 15 ALA ALA C . n C 1 18 LEU 18 16 16 LEU LEU C . n C 1 19 LYS 19 17 17 LYS LYS C . n C 1 20 ASP 20 18 18 ASP ASP C . n C 1 21 ARG 21 19 19 ARG ARG C . n C 1 22 PHE 22 20 20 PHE PHE C . n C 1 23 GLN 23 21 21 GLN GLN C . n C 1 24 LYS 24 22 22 LYS LYS C . n C 1 25 GLN 25 23 23 GLN GLN C . n C 1 26 LYS 26 24 24 LYS LYS C . n C 1 27 TYR 27 25 25 TYR TYR C . n C 1 28 LEU 28 26 26 LEU LEU C . n C 1 29 SER 29 27 27 SER SER C . n C 1 30 LEU 30 28 28 LEU LEU C . n C 1 31 GLN 31 29 29 GLN GLN C . n C 1 32 GLN 32 30 30 GLN GLN C . n C 1 33 MET 33 31 31 MET MET C . n C 1 34 GLN 34 32 32 GLN GLN C . n C 1 35 GLU 35 33 33 GLU GLU C . n C 1 36 LEU 36 34 34 LEU LEU C . n C 1 37 SER 37 35 35 SER SER C . n C 1 38 SER 38 36 36 SER SER C . n C 1 39 ILE 39 37 37 ILE ILE C . n C 1 40 LEU 40 38 38 LEU LEU C . n C 1 41 ASN 41 39 39 ASN ASN C . n C 1 42 LEU 42 40 40 LEU LEU C . n C 1 43 SER 43 41 41 SER SER C . n C 1 44 TYR 44 42 42 TYR TYR C . n C 1 45 LYS 45 43 43 LYS LYS C . n C 1 46 GLN 46 44 44 GLN GLN C . n C 1 47 VAL 47 45 45 VAL VAL C . n C 1 48 LYS 48 46 46 LYS LYS C . n C 1 49 THR 49 47 47 THR THR C . n C 1 50 TRP 50 48 48 TRP TRP C . n C 1 51 PHE 51 49 49 PHE PHE C . n C 1 52 GLN 52 50 50 GLN GLN C . n C 1 53 ASN 53 51 51 ASN ASN C . n C 1 54 GLN 54 52 52 GLN GLN C . n C 1 55 ARG 55 53 53 ARG ARG C . n C 1 56 MET 56 54 54 MET MET C . n C 1 57 LYS 57 55 55 LYS LYS C . n C 1 58 CYS 58 56 56 CYS CYS C . n C 1 59 LYS 59 57 57 LYS LYS C . n C 1 60 ARG 60 58 58 ARG ARG C . n C 1 61 TRP 61 59 59 TRP TRP C . n C 1 62 GLN 62 60 60 GLN GLN C . n D 1 1 GLY 1 -1 ? ? ? D . n D 1 2 THR 2 0 ? ? ? D . n D 1 3 LYS 3 1 ? ? ? D . n D 1 4 GLN 4 2 ? ? ? D . n D 1 5 LYS 5 3 ? ? ? D . n D 1 6 MET 6 4 ? ? ? D . n D 1 7 ARG 7 5 ? ? ? D . n D 1 8 THR 8 6 6 THR THR D . n D 1 9 VAL 9 7 7 VAL VAL D . n D 1 10 PHE 10 8 8 PHE PHE D . n D 1 11 SER 11 9 9 SER SER D . n D 1 12 GLN 12 10 10 GLN GLN D . n D 1 13 ALA 13 11 11 ALA ALA D . n D 1 14 GLN 14 12 12 GLN GLN D . n D 1 15 LEU 15 13 13 LEU LEU D . n D 1 16 CYS 16 14 14 CYS CYS D . n D 1 17 ALA 17 15 15 ALA ALA D . n D 1 18 LEU 18 16 16 LEU LEU D . n D 1 19 LYS 19 17 17 LYS LYS D . n D 1 20 ASP 20 18 18 ASP ASP D . n D 1 21 ARG 21 19 19 ARG ARG D . n D 1 22 PHE 22 20 20 PHE PHE D . n D 1 23 GLN 23 21 21 GLN GLN D . n D 1 24 LYS 24 22 22 LYS LYS D . n D 1 25 GLN 25 23 23 GLN GLN D . n D 1 26 LYS 26 24 24 LYS LYS D . n D 1 27 TYR 27 25 25 TYR TYR D . n D 1 28 LEU 28 26 26 LEU LEU D . n D 1 29 SER 29 27 27 SER SER D . n D 1 30 LEU 30 28 28 LEU LEU D . n D 1 31 GLN 31 29 29 GLN GLN D . n D 1 32 GLN 32 30 30 GLN GLN D . n D 1 33 MET 33 31 31 MET MET D . n D 1 34 GLN 34 32 32 GLN GLN D . n D 1 35 GLU 35 33 33 GLU GLU D . n D 1 36 LEU 36 34 34 LEU LEU D . n D 1 37 SER 37 35 35 SER SER D . n D 1 38 SER 38 36 36 SER SER D . n D 1 39 ILE 39 37 37 ILE ILE D . n D 1 40 LEU 40 38 38 LEU LEU D . n D 1 41 ASN 41 39 39 ASN ASN D . n D 1 42 LEU 42 40 40 LEU LEU D . n D 1 43 SER 43 41 41 SER SER D . n D 1 44 TYR 44 42 42 TYR TYR D . n D 1 45 LYS 45 43 43 LYS LYS D . n D 1 46 GLN 46 44 44 GLN GLN D . n D 1 47 VAL 47 45 45 VAL VAL D . n D 1 48 LYS 48 46 46 LYS LYS D . n D 1 49 THR 49 47 47 THR THR D . n D 1 50 TRP 50 48 48 TRP TRP D . n D 1 51 PHE 51 49 49 PHE PHE D . n D 1 52 GLN 52 50 50 GLN GLN D . n D 1 53 ASN 53 51 51 ASN ASN D . n D 1 54 GLN 54 52 52 GLN GLN D . n D 1 55 ARG 55 53 53 ARG ARG D . n D 1 56 MET 56 54 54 MET MET D . n D 1 57 LYS 57 55 55 LYS LYS D . n D 1 58 CYS 58 56 56 CYS CYS D . n D 1 59 LYS 59 57 57 LYS LYS D . n D 1 60 ARG 60 58 58 ARG ARG D . n D 1 61 TRP 61 59 59 TRP TRP D . n D 1 62 GLN 62 60 60 GLN GLN D . n E 1 1 GLY 1 -1 ? ? ? E . n E 1 2 THR 2 0 ? ? ? E . n E 1 3 LYS 3 1 ? ? ? E . n E 1 4 GLN 4 2 ? ? ? E . n E 1 5 LYS 5 3 ? ? ? E . n E 1 6 MET 6 4 ? ? ? E . n E 1 7 ARG 7 5 ? ? ? E . n E 1 8 THR 8 6 ? ? ? E . n E 1 9 VAL 9 7 7 VAL VAL E . n E 1 10 PHE 10 8 8 PHE PHE E . n E 1 11 SER 11 9 9 SER SER E . n E 1 12 GLN 12 10 10 GLN GLN E . n E 1 13 ALA 13 11 11 ALA ALA E . n E 1 14 GLN 14 12 12 GLN GLN E . n E 1 15 LEU 15 13 13 LEU LEU E . n E 1 16 CYS 16 14 14 CYS CYS E . n E 1 17 ALA 17 15 15 ALA ALA E . n E 1 18 LEU 18 16 16 LEU LEU E . n E 1 19 LYS 19 17 17 LYS LYS E . n E 1 20 ASP 20 18 18 ASP ASP E . n E 1 21 ARG 21 19 19 ARG ARG E . n E 1 22 PHE 22 20 20 PHE PHE E . n E 1 23 GLN 23 21 21 GLN GLN E . n E 1 24 LYS 24 22 22 LYS LYS E . n E 1 25 GLN 25 23 23 GLN GLN E . n E 1 26 LYS 26 24 24 LYS LYS E . n E 1 27 TYR 27 25 25 TYR TYR E . n E 1 28 LEU 28 26 26 LEU LEU E . n E 1 29 SER 29 27 27 SER SER E . n E 1 30 LEU 30 28 28 LEU LEU E . n E 1 31 GLN 31 29 29 GLN GLN E . n E 1 32 GLN 32 30 30 GLN GLN E . n E 1 33 MET 33 31 31 MET MET E . n E 1 34 GLN 34 32 32 GLN GLN E . n E 1 35 GLU 35 33 33 GLU GLU E . n E 1 36 LEU 36 34 34 LEU LEU E . n E 1 37 SER 37 35 35 SER SER E . n E 1 38 SER 38 36 36 SER SER E . n E 1 39 ILE 39 37 37 ILE ILE E . n E 1 40 LEU 40 38 38 LEU LEU E . n E 1 41 ASN 41 39 39 ASN ASN E . n E 1 42 LEU 42 40 40 LEU LEU E . n E 1 43 SER 43 41 41 SER SER E . n E 1 44 TYR 44 42 42 TYR TYR E . n E 1 45 LYS 45 43 43 LYS LYS E . n E 1 46 GLN 46 44 44 GLN GLN E . n E 1 47 VAL 47 45 45 VAL VAL E . n E 1 48 LYS 48 46 46 LYS LYS E . n E 1 49 THR 49 47 47 THR THR E . n E 1 50 TRP 50 48 48 TRP TRP E . n E 1 51 PHE 51 49 49 PHE PHE E . n E 1 52 GLN 52 50 50 GLN GLN E . n E 1 53 ASN 53 51 51 ASN ASN E . n E 1 54 GLN 54 52 52 GLN GLN E . n E 1 55 ARG 55 53 53 ARG ARG E . n E 1 56 MET 56 54 54 MET MET E . n E 1 57 LYS 57 55 55 LYS LYS E . n E 1 58 CYS 58 56 56 CYS CYS E . n E 1 59 LYS 59 57 57 LYS LYS E . n E 1 60 ARG 60 58 58 ARG ARG E . n E 1 61 TRP 61 59 59 TRP TRP E . n E 1 62 GLN 62 60 60 GLN GLN E . n F 1 1 GLY 1 -1 ? ? ? F . n F 1 2 THR 2 0 ? ? ? F . n F 1 3 LYS 3 1 ? ? ? F . n F 1 4 GLN 4 2 ? ? ? F . n F 1 5 LYS 5 3 ? ? ? F . n F 1 6 MET 6 4 ? ? ? F . n F 1 7 ARG 7 5 ? ? ? F . n F 1 8 THR 8 6 6 THR THR F . n F 1 9 VAL 9 7 7 VAL VAL F . n F 1 10 PHE 10 8 8 PHE PHE F . n F 1 11 SER 11 9 9 SER SER F . n F 1 12 GLN 12 10 10 GLN GLN F . n F 1 13 ALA 13 11 11 ALA ALA F . n F 1 14 GLN 14 12 12 GLN GLN F . n F 1 15 LEU 15 13 13 LEU LEU F . n F 1 16 CYS 16 14 14 CYS CYS F . n F 1 17 ALA 17 15 15 ALA ALA F . n F 1 18 LEU 18 16 16 LEU LEU F . n F 1 19 LYS 19 17 17 LYS LYS F . n F 1 20 ASP 20 18 18 ASP ASP F . n F 1 21 ARG 21 19 19 ARG ARG F . n F 1 22 PHE 22 20 20 PHE PHE F . n F 1 23 GLN 23 21 21 GLN GLN F . n F 1 24 LYS 24 22 22 LYS LYS F . n F 1 25 GLN 25 23 23 GLN GLN F . n F 1 26 LYS 26 24 24 LYS LYS F . n F 1 27 TYR 27 25 25 TYR TYR F . n F 1 28 LEU 28 26 26 LEU LEU F . n F 1 29 SER 29 27 27 SER SER F . n F 1 30 LEU 30 28 28 LEU LEU F . n F 1 31 GLN 31 29 29 GLN GLN F . n F 1 32 GLN 32 30 30 GLN GLN F . n F 1 33 MET 33 31 31 MET MET F . n F 1 34 GLN 34 32 32 GLN GLN F . n F 1 35 GLU 35 33 33 GLU GLU F . n F 1 36 LEU 36 34 34 LEU LEU F . n F 1 37 SER 37 35 35 SER SER F . n F 1 38 SER 38 36 36 SER SER F . n F 1 39 ILE 39 37 37 ILE ILE F . n F 1 40 LEU 40 38 38 LEU LEU F . n F 1 41 ASN 41 39 39 ASN ASN F . n F 1 42 LEU 42 40 40 LEU LEU F . n F 1 43 SER 43 41 41 SER SER F . n F 1 44 TYR 44 42 42 TYR TYR F . n F 1 45 LYS 45 43 43 LYS LYS F . n F 1 46 GLN 46 44 44 GLN GLN F . n F 1 47 VAL 47 45 45 VAL VAL F . n F 1 48 LYS 48 46 46 LYS LYS F . n F 1 49 THR 49 47 47 THR THR F . n F 1 50 TRP 50 48 48 TRP TRP F . n F 1 51 PHE 51 49 49 PHE PHE F . n F 1 52 GLN 52 50 50 GLN GLN F . n F 1 53 ASN 53 51 51 ASN ASN F . n F 1 54 GLN 54 52 52 GLN GLN F . n F 1 55 ARG 55 53 53 ARG ARG F . n F 1 56 MET 56 54 54 MET MET F . n F 1 57 LYS 57 55 55 LYS LYS F . n F 1 58 CYS 58 56 56 CYS CYS F . n F 1 59 LYS 59 57 57 LYS LYS F . n F 1 60 ARG 60 58 58 ARG ARG F . n F 1 61 TRP 61 59 59 TRP TRP F . n F 1 62 GLN 62 60 60 GLN GLN F . n G 1 1 GLY 1 -1 ? ? ? G . n G 1 2 THR 2 0 ? ? ? G . n G 1 3 LYS 3 1 ? ? ? G . n G 1 4 GLN 4 2 ? ? ? G . n G 1 5 LYS 5 3 ? ? ? G . n G 1 6 MET 6 4 ? ? ? G . n G 1 7 ARG 7 5 ? ? ? G . n G 1 8 THR 8 6 6 THR THR G . n G 1 9 VAL 9 7 7 VAL VAL G . n G 1 10 PHE 10 8 8 PHE PHE G . n G 1 11 SER 11 9 9 SER SER G . n G 1 12 GLN 12 10 10 GLN GLN G . n G 1 13 ALA 13 11 11 ALA ALA G . n G 1 14 GLN 14 12 12 GLN GLN G . n G 1 15 LEU 15 13 13 LEU LEU G . n G 1 16 CYS 16 14 14 CYS CYS G . n G 1 17 ALA 17 15 15 ALA ALA G . n G 1 18 LEU 18 16 16 LEU LEU G . n G 1 19 LYS 19 17 17 LYS LYS G . n G 1 20 ASP 20 18 18 ASP ASP G . n G 1 21 ARG 21 19 19 ARG ARG G . n G 1 22 PHE 22 20 20 PHE PHE G . n G 1 23 GLN 23 21 21 GLN GLN G . n G 1 24 LYS 24 22 22 LYS LYS G . n G 1 25 GLN 25 23 23 GLN GLN G . n G 1 26 LYS 26 24 24 LYS LYS G . n G 1 27 TYR 27 25 25 TYR TYR G . n G 1 28 LEU 28 26 26 LEU LEU G . n G 1 29 SER 29 27 27 SER SER G . n G 1 30 LEU 30 28 28 LEU LEU G . n G 1 31 GLN 31 29 29 GLN GLN G . n G 1 32 GLN 32 30 30 GLN GLN G . n G 1 33 MET 33 31 31 MET MET G . n G 1 34 GLN 34 32 32 GLN GLN G . n G 1 35 GLU 35 33 33 GLU GLU G . n G 1 36 LEU 36 34 34 LEU LEU G . n G 1 37 SER 37 35 35 SER SER G . n G 1 38 SER 38 36 36 SER SER G . n G 1 39 ILE 39 37 37 ILE ILE G . n G 1 40 LEU 40 38 38 LEU LEU G . n G 1 41 ASN 41 39 39 ASN ASN G . n G 1 42 LEU 42 40 40 LEU LEU G . n G 1 43 SER 43 41 41 SER SER G . n G 1 44 TYR 44 42 42 TYR TYR G . n G 1 45 LYS 45 43 43 LYS LYS G . n G 1 46 GLN 46 44 44 GLN GLN G . n G 1 47 VAL 47 45 45 VAL VAL G . n G 1 48 LYS 48 46 46 LYS LYS G . n G 1 49 THR 49 47 47 THR THR G . n G 1 50 TRP 50 48 48 TRP TRP G . n G 1 51 PHE 51 49 49 PHE PHE G . n G 1 52 GLN 52 50 50 GLN GLN G . n G 1 53 ASN 53 51 51 ASN ASN G . n G 1 54 GLN 54 52 52 GLN GLN G . n G 1 55 ARG 55 53 53 ARG ARG G . n G 1 56 MET 56 54 54 MET MET G . n G 1 57 LYS 57 55 55 LYS LYS G . n G 1 58 CYS 58 56 56 CYS CYS G . n G 1 59 LYS 59 57 57 LYS LYS G . n G 1 60 ARG 60 58 58 ARG ARG G . n G 1 61 TRP 61 59 59 TRP TRP G . n G 1 62 GLN 62 60 60 GLN GLN G . n H 1 1 GLY 1 -1 ? ? ? H . n H 1 2 THR 2 0 ? ? ? H . n H 1 3 LYS 3 1 ? ? ? H . n H 1 4 GLN 4 2 ? ? ? H . n H 1 5 LYS 5 3 ? ? ? H . n H 1 6 MET 6 4 ? ? ? H . n H 1 7 ARG 7 5 ? ? ? H . n H 1 8 THR 8 6 ? ? ? H . n H 1 9 VAL 9 7 7 VAL VAL H . n H 1 10 PHE 10 8 8 PHE PHE H . n H 1 11 SER 11 9 9 SER SER H . n H 1 12 GLN 12 10 10 GLN GLN H . n H 1 13 ALA 13 11 11 ALA ALA H . n H 1 14 GLN 14 12 12 GLN GLN H . n H 1 15 LEU 15 13 13 LEU LEU H . n H 1 16 CYS 16 14 14 CYS CYS H . n H 1 17 ALA 17 15 15 ALA ALA H . n H 1 18 LEU 18 16 16 LEU LEU H . n H 1 19 LYS 19 17 17 LYS LYS H . n H 1 20 ASP 20 18 18 ASP ASP H . n H 1 21 ARG 21 19 19 ARG ARG H . n H 1 22 PHE 22 20 20 PHE PHE H . n H 1 23 GLN 23 21 21 GLN GLN H . n H 1 24 LYS 24 22 22 LYS LYS H . n H 1 25 GLN 25 23 23 GLN GLN H . n H 1 26 LYS 26 24 24 LYS LYS H . n H 1 27 TYR 27 25 25 TYR TYR H . n H 1 28 LEU 28 26 26 LEU LEU H . n H 1 29 SER 29 27 27 SER SER H . n H 1 30 LEU 30 28 28 LEU LEU H . n H 1 31 GLN 31 29 29 GLN GLN H . n H 1 32 GLN 32 30 30 GLN GLN H . n H 1 33 MET 33 31 31 MET MET H . n H 1 34 GLN 34 32 32 GLN GLN H . n H 1 35 GLU 35 33 33 GLU GLU H . n H 1 36 LEU 36 34 34 LEU LEU H . n H 1 37 SER 37 35 35 SER SER H . n H 1 38 SER 38 36 36 SER SER H . n H 1 39 ILE 39 37 37 ILE ILE H . n H 1 40 LEU 40 38 38 LEU LEU H . n H 1 41 ASN 41 39 39 ASN ASN H . n H 1 42 LEU 42 40 40 LEU LEU H . n H 1 43 SER 43 41 41 SER SER H . n H 1 44 TYR 44 42 42 TYR TYR H . n H 1 45 LYS 45 43 43 LYS LYS H . n H 1 46 GLN 46 44 44 GLN GLN H . n H 1 47 VAL 47 45 45 VAL VAL H . n H 1 48 LYS 48 46 46 LYS LYS H . n H 1 49 THR 49 47 47 THR THR H . n H 1 50 TRP 50 48 48 TRP TRP H . n H 1 51 PHE 51 49 49 PHE PHE H . n H 1 52 GLN 52 50 50 GLN GLN H . n H 1 53 ASN 53 51 51 ASN ASN H . n H 1 54 GLN 54 52 52 GLN GLN H . n H 1 55 ARG 55 53 53 ARG ARG H . n H 1 56 MET 56 54 54 MET MET H . n H 1 57 LYS 57 55 55 LYS LYS H . n H 1 58 CYS 58 56 56 CYS CYS H . n H 1 59 LYS 59 57 57 LYS LYS H . n H 1 60 ARG 60 58 58 ARG ARG H . n H 1 61 TRP 61 59 59 TRP TRP H . n H 1 62 GLN 62 60 60 GLN GLN H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 HOH 1 2001 2001 HOH HOH A . I 2 HOH 2 2002 2002 HOH HOH A . I 2 HOH 3 2003 2003 HOH HOH A . I 2 HOH 4 2004 2004 HOH HOH A . I 2 HOH 5 2005 2005 HOH HOH A . I 2 HOH 6 2006 2006 HOH HOH A . I 2 HOH 7 2007 2007 HOH HOH A . I 2 HOH 8 2008 2008 HOH HOH A . I 2 HOH 9 2009 2009 HOH HOH A . I 2 HOH 10 2010 2010 HOH HOH A . J 2 HOH 1 2001 2001 HOH HOH B . J 2 HOH 2 2002 2002 HOH HOH B . J 2 HOH 3 2003 2003 HOH HOH B . J 2 HOH 4 2004 2004 HOH HOH B . J 2 HOH 5 2005 2005 HOH HOH B . J 2 HOH 6 2006 2006 HOH HOH B . J 2 HOH 7 2007 2007 HOH HOH B . J 2 HOH 8 2008 2008 HOH HOH B . J 2 HOH 9 2009 2009 HOH HOH B . J 2 HOH 10 2010 2010 HOH HOH B . J 2 HOH 11 2011 2011 HOH HOH B . J 2 HOH 12 2012 2012 HOH HOH B . J 2 HOH 13 2013 2013 HOH HOH B . K 2 HOH 1 2001 2001 HOH HOH C . K 2 HOH 2 2002 2002 HOH HOH C . K 2 HOH 3 2003 2003 HOH HOH C . K 2 HOH 4 2004 2004 HOH HOH C . K 2 HOH 5 2005 2005 HOH HOH C . K 2 HOH 6 2006 2006 HOH HOH C . K 2 HOH 7 2007 2007 HOH HOH C . K 2 HOH 8 2008 2008 HOH HOH C . K 2 HOH 9 2009 2009 HOH HOH C . K 2 HOH 10 2010 2010 HOH HOH C . K 2 HOH 11 2011 2011 HOH HOH C . L 2 HOH 1 2001 2001 HOH HOH D . L 2 HOH 2 2002 2002 HOH HOH D . L 2 HOH 3 2003 2003 HOH HOH D . L 2 HOH 4 2004 2004 HOH HOH D . M 2 HOH 1 2001 2001 HOH HOH E . M 2 HOH 2 2002 2002 HOH HOH E . M 2 HOH 3 2003 2003 HOH HOH E . M 2 HOH 4 2004 2004 HOH HOH E . M 2 HOH 5 2005 2005 HOH HOH E . M 2 HOH 6 2006 2006 HOH HOH E . M 2 HOH 7 2007 2007 HOH HOH E . M 2 HOH 8 2008 2008 HOH HOH E . M 2 HOH 9 2009 2009 HOH HOH E . N 2 HOH 1 2001 2001 HOH HOH F . N 2 HOH 2 2002 2002 HOH HOH F . N 2 HOH 3 2003 2003 HOH HOH F . N 2 HOH 4 2004 2004 HOH HOH F . N 2 HOH 5 2005 2005 HOH HOH F . N 2 HOH 6 2006 2006 HOH HOH F . N 2 HOH 7 2007 2007 HOH HOH F . N 2 HOH 8 2008 2008 HOH HOH F . O 2 HOH 1 2001 2001 HOH HOH G . O 2 HOH 2 2002 2002 HOH HOH G . O 2 HOH 3 2003 2003 HOH HOH G . O 2 HOH 4 2004 2004 HOH HOH G . O 2 HOH 5 2005 2005 HOH HOH G . O 2 HOH 6 2006 2006 HOH HOH G . O 2 HOH 7 2007 2007 HOH HOH G . P 2 HOH 1 2001 2001 HOH HOH H . P 2 HOH 2 2002 2002 HOH HOH H . P 2 HOH 3 2003 2003 HOH HOH H . P 2 HOH 4 2004 2004 HOH HOH H . P 2 HOH 5 2005 2005 HOH HOH H . P 2 HOH 6 2006 2006 HOH HOH H . P 2 HOH 7 2007 2007 HOH HOH H . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 3 author_and_software_defined_assembly PQS monomeric 1 4 author_and_software_defined_assembly PQS monomeric 1 5 author_and_software_defined_assembly PQS monomeric 1 6 author_and_software_defined_assembly PQS monomeric 1 7 author_and_software_defined_assembly PQS monomeric 1 8 author_and_software_defined_assembly PQS monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,I 2 1 B,J 3 1 C,K 4 1 D,L 5 1 E,M 6 1 F,N 7 1 G,O 8 1 H,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-01-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' Other 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 20.8972 36.8960 43.0032 -0.0612 -0.1902 -0.0776 -0.0018 0.0373 -0.0360 2.7097 11.1122 5.7943 1.8204 0.0145 -3.4616 0.0219 0.0039 0.1990 -0.0098 -0.0098 0.0370 -0.1967 0.1410 -0.0121 'X-RAY DIFFRACTION' 2 ? refined 46.1109 61.6297 41.5968 -0.1019 -0.0489 -0.0243 -0.0342 -0.0591 -0.0410 16.8481 1.2269 2.1403 2.3935 0.4260 -0.9347 0.0232 -0.6510 0.0123 0.1054 -0.0785 0.0162 -0.0862 0.1328 0.0553 'X-RAY DIFFRACTION' 3 ? refined 25.2893 67.8159 39.8445 -0.0881 -0.1423 -0.0757 -0.0027 0.0801 0.0304 7.4803 16.1526 1.1416 -3.1264 0.6165 -0.1741 -0.0581 0.1330 0.3514 0.6901 0.2187 -0.2114 -0.0030 -0.0404 -0.1606 'X-RAY DIFFRACTION' 4 ? refined 12.1411 59.4313 69.2244 -0.0909 -0.1286 -0.0677 -0.0288 -0.0801 -0.0642 10.9850 6.1674 11.5485 -3.5856 8.1421 -2.3048 0.7361 0.3318 -1.0742 -0.0879 -0.1095 0.2243 0.7363 -0.1368 -0.6266 'X-RAY DIFFRACTION' 5 ? refined 23.4197 76.1597 75.8197 -0.0744 -0.1715 -0.1345 0.0223 -0.0271 0.0399 20.6970 9.2223 6.7508 -5.0016 9.7548 -1.8282 -0.7273 0.5152 1.2150 0.7847 -0.0284 -1.0327 -0.3179 0.1860 0.7557 'X-RAY DIFFRACTION' 6 ? refined -0.8383 74.0908 56.1177 -0.2606 0.1457 -0.2078 0.0501 0.0027 0.0802 11.8658 6.9012 11.0460 1.8270 1.5010 -0.8311 0.1503 1.0769 0.3064 -0.3025 0.0594 0.1477 -0.0357 0.1972 -0.2096 'X-RAY DIFFRACTION' 7 ? refined 11.7333 54.4171 30.4267 -0.1135 -0.1005 0.0591 -0.1086 -0.0666 0.1098 5.6802 19.3998 5.3190 -0.5774 1.1003 -4.5101 -0.1549 0.3443 0.2525 -0.9166 0.3567 0.7889 0.0611 -0.2538 -0.2018 'X-RAY DIFFRACTION' 8 ? refined 11.2016 85.1688 34.3696 -0.0599 -0.1516 0.0018 0.1122 0.1353 0.2539 12.2837 6.3878 7.5515 0.6870 -5.2643 -0.2949 0.2392 -0.1857 0.1050 0.2110 0.1702 0.6561 -0.3055 -0.5742 -0.4095 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 6 ? ? A 60 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 7 ? ? B 60 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 6 ? ? C 60 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 6 ? ? D 60 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 E 7 ? ? E 60 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 F 6 ? ? F 60 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 G 6 ? ? G 60 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 H 7 ? ? H 60 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 2VI6 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'GT DIPEPTIDE DERVIED FROM THE EXPRESSION VECTOR' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD E LYS 43 ? ? CE E LYS 43 ? ? 1.753 1.508 0.245 0.025 N 2 1 CE E LYS 43 ? ? NZ E LYS 43 ? ? 1.695 1.486 0.209 0.025 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CD _pdbx_validate_rmsd_angle.auth_asym_id_1 E _pdbx_validate_rmsd_angle.auth_comp_id_1 LYS _pdbx_validate_rmsd_angle.auth_seq_id_1 43 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CE _pdbx_validate_rmsd_angle.auth_asym_id_2 E _pdbx_validate_rmsd_angle.auth_comp_id_2 LYS _pdbx_validate_rmsd_angle.auth_seq_id_2 43 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NZ _pdbx_validate_rmsd_angle.auth_asym_id_3 E _pdbx_validate_rmsd_angle.auth_comp_id_3 LYS _pdbx_validate_rmsd_angle.auth_seq_id_3 43 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 94.41 _pdbx_validate_rmsd_angle.angle_target_value 111.70 _pdbx_validate_rmsd_angle.angle_deviation -17.29 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL D 7 ? ? -150.82 9.52 2 1 GLN D 23 ? ? -160.14 118.99 3 1 GLN E 23 ? ? -173.57 115.32 4 1 SER E 27 ? ? -65.56 -163.82 5 1 LYS G 57 ? ? 0.28 -70.04 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 CYS _pdbx_validate_peptide_omega.auth_asym_id_1 G _pdbx_validate_peptide_omega.auth_seq_id_1 56 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 LYS _pdbx_validate_peptide_omega.auth_asym_id_2 G _pdbx_validate_peptide_omega.auth_seq_id_2 57 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 145.40 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A THR 0 ? A THR 2 3 1 Y 1 A LYS 1 ? A LYS 3 4 1 Y 1 A GLN 2 ? A GLN 4 5 1 Y 1 A LYS 3 ? A LYS 5 6 1 Y 1 A MET 4 ? A MET 6 7 1 Y 1 A ARG 5 ? A ARG 7 8 1 Y 1 B GLY -1 ? B GLY 1 9 1 Y 1 B THR 0 ? B THR 2 10 1 Y 1 B LYS 1 ? B LYS 3 11 1 Y 1 B GLN 2 ? B GLN 4 12 1 Y 1 B LYS 3 ? B LYS 5 13 1 Y 1 B MET 4 ? B MET 6 14 1 Y 1 B ARG 5 ? B ARG 7 15 1 Y 1 B THR 6 ? B THR 8 16 1 Y 1 C GLY -1 ? C GLY 1 17 1 Y 1 C THR 0 ? C THR 2 18 1 Y 1 C LYS 1 ? C LYS 3 19 1 Y 1 C GLN 2 ? C GLN 4 20 1 Y 1 C LYS 3 ? C LYS 5 21 1 Y 1 C MET 4 ? C MET 6 22 1 Y 1 C ARG 5 ? C ARG 7 23 1 Y 1 D GLY -1 ? D GLY 1 24 1 Y 1 D THR 0 ? D THR 2 25 1 Y 1 D LYS 1 ? D LYS 3 26 1 Y 1 D GLN 2 ? D GLN 4 27 1 Y 1 D LYS 3 ? D LYS 5 28 1 Y 1 D MET 4 ? D MET 6 29 1 Y 1 D ARG 5 ? D ARG 7 30 1 Y 1 E GLY -1 ? E GLY 1 31 1 Y 1 E THR 0 ? E THR 2 32 1 Y 1 E LYS 1 ? E LYS 3 33 1 Y 1 E GLN 2 ? E GLN 4 34 1 Y 1 E LYS 3 ? E LYS 5 35 1 Y 1 E MET 4 ? E MET 6 36 1 Y 1 E ARG 5 ? E ARG 7 37 1 Y 1 E THR 6 ? E THR 8 38 1 Y 1 F GLY -1 ? F GLY 1 39 1 Y 1 F THR 0 ? F THR 2 40 1 Y 1 F LYS 1 ? F LYS 3 41 1 Y 1 F GLN 2 ? F GLN 4 42 1 Y 1 F LYS 3 ? F LYS 5 43 1 Y 1 F MET 4 ? F MET 6 44 1 Y 1 F ARG 5 ? F ARG 7 45 1 Y 1 G GLY -1 ? G GLY 1 46 1 Y 1 G THR 0 ? G THR 2 47 1 Y 1 G LYS 1 ? G LYS 3 48 1 Y 1 G GLN 2 ? G GLN 4 49 1 Y 1 G LYS 3 ? G LYS 5 50 1 Y 1 G MET 4 ? G MET 6 51 1 Y 1 G ARG 5 ? G ARG 7 52 1 Y 1 H GLY -1 ? H GLY 1 53 1 Y 1 H THR 0 ? H THR 2 54 1 Y 1 H LYS 1 ? H LYS 3 55 1 Y 1 H GLN 2 ? H GLN 4 56 1 Y 1 H LYS 3 ? H LYS 5 57 1 Y 1 H MET 4 ? H MET 6 58 1 Y 1 H ARG 5 ? H ARG 7 59 1 Y 1 H THR 6 ? H THR 8 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 SER N N N N 252 SER CA C N S 253 SER C C N N 254 SER O O N N 255 SER CB C N N 256 SER OG O N N 257 SER OXT O N N 258 SER H H N N 259 SER H2 H N N 260 SER HA H N N 261 SER HB2 H N N 262 SER HB3 H N N 263 SER HG H N N 264 SER HXT H N N 265 THR N N N N 266 THR CA C N S 267 THR C C N N 268 THR O O N N 269 THR CB C N R 270 THR OG1 O N N 271 THR CG2 C N N 272 THR OXT O N N 273 THR H H N N 274 THR H2 H N N 275 THR HA H N N 276 THR HB H N N 277 THR HG1 H N N 278 THR HG21 H N N 279 THR HG22 H N N 280 THR HG23 H N N 281 THR HXT H N N 282 TRP N N N N 283 TRP CA C N S 284 TRP C C N N 285 TRP O O N N 286 TRP CB C N N 287 TRP CG C Y N 288 TRP CD1 C Y N 289 TRP CD2 C Y N 290 TRP NE1 N Y N 291 TRP CE2 C Y N 292 TRP CE3 C Y N 293 TRP CZ2 C Y N 294 TRP CZ3 C Y N 295 TRP CH2 C Y N 296 TRP OXT O N N 297 TRP H H N N 298 TRP H2 H N N 299 TRP HA H N N 300 TRP HB2 H N N 301 TRP HB3 H N N 302 TRP HD1 H N N 303 TRP HE1 H N N 304 TRP HE3 H N N 305 TRP HZ2 H N N 306 TRP HZ3 H N N 307 TRP HH2 H N N 308 TRP HXT H N N 309 TYR N N N N 310 TYR CA C N S 311 TYR C C N N 312 TYR O O N N 313 TYR CB C N N 314 TYR CG C Y N 315 TYR CD1 C Y N 316 TYR CD2 C Y N 317 TYR CE1 C Y N 318 TYR CE2 C Y N 319 TYR CZ C Y N 320 TYR OH O N N 321 TYR OXT O N N 322 TYR H H N N 323 TYR H2 H N N 324 TYR HA H N N 325 TYR HB2 H N N 326 TYR HB3 H N N 327 TYR HD1 H N N 328 TYR HD2 H N N 329 TYR HE1 H N N 330 TYR HE2 H N N 331 TYR HH H N N 332 TYR HXT H N N 333 VAL N N N N 334 VAL CA C N S 335 VAL C C N N 336 VAL O O N N 337 VAL CB C N N 338 VAL CG1 C N N 339 VAL CG2 C N N 340 VAL OXT O N N 341 VAL H H N N 342 VAL H2 H N N 343 VAL HA H N N 344 VAL HB H N N 345 VAL HG11 H N N 346 VAL HG12 H N N 347 VAL HG13 H N N 348 VAL HG21 H N N 349 VAL HG22 H N N 350 VAL HG23 H N N 351 VAL HXT H N N 352 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 SER N CA sing N N 239 SER N H sing N N 240 SER N H2 sing N N 241 SER CA C sing N N 242 SER CA CB sing N N 243 SER CA HA sing N N 244 SER C O doub N N 245 SER C OXT sing N N 246 SER CB OG sing N N 247 SER CB HB2 sing N N 248 SER CB HB3 sing N N 249 SER OG HG sing N N 250 SER OXT HXT sing N N 251 THR N CA sing N N 252 THR N H sing N N 253 THR N H2 sing N N 254 THR CA C sing N N 255 THR CA CB sing N N 256 THR CA HA sing N N 257 THR C O doub N N 258 THR C OXT sing N N 259 THR CB OG1 sing N N 260 THR CB CG2 sing N N 261 THR CB HB sing N N 262 THR OG1 HG1 sing N N 263 THR CG2 HG21 sing N N 264 THR CG2 HG22 sing N N 265 THR CG2 HG23 sing N N 266 THR OXT HXT sing N N 267 TRP N CA sing N N 268 TRP N H sing N N 269 TRP N H2 sing N N 270 TRP CA C sing N N 271 TRP CA CB sing N N 272 TRP CA HA sing N N 273 TRP C O doub N N 274 TRP C OXT sing N N 275 TRP CB CG sing N N 276 TRP CB HB2 sing N N 277 TRP CB HB3 sing N N 278 TRP CG CD1 doub Y N 279 TRP CG CD2 sing Y N 280 TRP CD1 NE1 sing Y N 281 TRP CD1 HD1 sing N N 282 TRP CD2 CE2 doub Y N 283 TRP CD2 CE3 sing Y N 284 TRP NE1 CE2 sing Y N 285 TRP NE1 HE1 sing N N 286 TRP CE2 CZ2 sing Y N 287 TRP CE3 CZ3 doub Y N 288 TRP CE3 HE3 sing N N 289 TRP CZ2 CH2 doub Y N 290 TRP CZ2 HZ2 sing N N 291 TRP CZ3 CH2 sing Y N 292 TRP CZ3 HZ3 sing N N 293 TRP CH2 HH2 sing N N 294 TRP OXT HXT sing N N 295 TYR N CA sing N N 296 TYR N H sing N N 297 TYR N H2 sing N N 298 TYR CA C sing N N 299 TYR CA CB sing N N 300 TYR CA HA sing N N 301 TYR C O doub N N 302 TYR C OXT sing N N 303 TYR CB CG sing N N 304 TYR CB HB2 sing N N 305 TYR CB HB3 sing N N 306 TYR CG CD1 doub Y N 307 TYR CG CD2 sing Y N 308 TYR CD1 CE1 sing Y N 309 TYR CD1 HD1 sing N N 310 TYR CD2 CE2 doub Y N 311 TYR CD2 HD2 sing N N 312 TYR CE1 CZ doub Y N 313 TYR CE1 HE1 sing N N 314 TYR CE2 CZ sing Y N 315 TYR CE2 HE2 sing N N 316 TYR CZ OH sing N N 317 TYR OH HH sing N N 318 TYR OXT HXT sing N N 319 VAL N CA sing N N 320 VAL N H sing N N 321 VAL N H2 sing N N 322 VAL CA C sing N N 323 VAL CA CB sing N N 324 VAL CA HA sing N N 325 VAL C O doub N N 326 VAL C OXT sing N N 327 VAL CB CG1 sing N N 328 VAL CB CG2 sing N N 329 VAL CB HB sing N N 330 VAL CG1 HG11 sing N N 331 VAL CG1 HG12 sing N N 332 VAL CG1 HG13 sing N N 333 VAL CG2 HG21 sing N N 334 VAL CG2 HG22 sing N N 335 VAL CG2 HG23 sing N N 336 VAL OXT HXT sing N N 337 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1IG7 _pdbx_initial_refinement_model.details 'PDB ENTRY 1IG7' #