data_2VQD # _entry.id 2VQD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VQD pdb_00002vqd 10.2210/pdb2vqd/pdb PDBE EBI-35552 ? ? WWPDB D_1290035552 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2C00 unspecified 'CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM PSEUDOMONAS AERUGINOSA IN APO FORM' PDB 2J9G unspecified 'CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM E. COLI IN COMPLEX WITH AMPPNP AND ADP' PDB 2VPQ unspecified 'CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM S. AUREUS COMPLEXED WITH AMPPNP' PDB 2VR1 unspecified 'CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM E. COLI IN COMPLEX WITH ATP ANALOG, ADPCF2P.' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VQD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-03-13 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Mochalkin, I.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural Evidence for Substrate-Induced Synergism and Half-Sites Reactivity in Biotin Carboxylase.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 17 _citation.page_first 1706 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18725455 _citation.pdbx_database_id_DOI 10.1110/PS.035584.108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mochalkin, I.' 1 ? primary 'Miller, J.R.' 2 ? primary 'Evdokimov, A.' 3 ? primary 'Lightle, S.' 4 ? primary 'Yan, C.' 5 ? primary 'Stover, C.K.' 6 ? primary 'Waldrop, G.L.' 7 ? # _cell.entry_id 2VQD _cell.length_a 64.227 _cell.length_b 126.786 _cell.length_c 49.878 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VQD _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BIOTIN CARBOXYLASE' 50779.715 1 6.3.4.14 ? ? ? 2 non-polymer syn 'PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER' 425.228 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 232 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ACETYL-COA CARBOXYLASE SUBUNIT A, ACC' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLEKVLIANRGEIALRILRACKELGIKTVAVHSTADRELMHLSLADESVCIGPAPATQSYLQIPAIIAAAEVTGATAIHP GYGFLAENADFAEQIERSGFTFVGPTAEVIRLMGDKVSAKDAMKRAGVPTVPGSDGPLPEDEETALAIAREVGYPVIIKA AGGGGGRGMRVVYDESELIKSAKLTRTEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQKVI EEAPAPGIDEKARQEVFARCVQACIEIGYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEMVTGVDIVKEMLRIASGEK LSIRQEDVVIRGHALECRINAEDPKTFMPSPGKVKHFHAPGGNGVRVDSHLYSGYSVPPNYDSLVGKVITYGADRDEALA RMRNALDELIVDGIKTNTELHKDLVRDAAFCKGGVNIHYLEKKLGMDKHGSENLYFQGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MLEKVLIANRGEIALRILRACKELGIKTVAVHSTADRELMHLSLADESVCIGPAPATQSYLQIPAIIAAAEVTGATAIHP GYGFLAENADFAEQIERSGFTFVGPTAEVIRLMGDKVSAKDAMKRAGVPTVPGSDGPLPEDEETALAIAREVGYPVIIKA AGGGGGRGMRVVYDESELIKSAKLTRTEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQKVI EEAPAPGIDEKARQEVFARCVQACIEIGYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEMVTGVDIVKEMLRIASGEK LSIRQEDVVIRGHALECRINAEDPKTFMPSPGKVKHFHAPGGNGVRVDSHLYSGYSVPPNYDSLVGKVITYGADRDEALA RMRNALDELIVDGIKTNTELHKDLVRDAAFCKGGVNIHYLEKKLGMDKHGSENLYFQGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 GLU n 1 4 LYS n 1 5 VAL n 1 6 LEU n 1 7 ILE n 1 8 ALA n 1 9 ASN n 1 10 ARG n 1 11 GLY n 1 12 GLU n 1 13 ILE n 1 14 ALA n 1 15 LEU n 1 16 ARG n 1 17 ILE n 1 18 LEU n 1 19 ARG n 1 20 ALA n 1 21 CYS n 1 22 LYS n 1 23 GLU n 1 24 LEU n 1 25 GLY n 1 26 ILE n 1 27 LYS n 1 28 THR n 1 29 VAL n 1 30 ALA n 1 31 VAL n 1 32 HIS n 1 33 SER n 1 34 THR n 1 35 ALA n 1 36 ASP n 1 37 ARG n 1 38 GLU n 1 39 LEU n 1 40 MET n 1 41 HIS n 1 42 LEU n 1 43 SER n 1 44 LEU n 1 45 ALA n 1 46 ASP n 1 47 GLU n 1 48 SER n 1 49 VAL n 1 50 CYS n 1 51 ILE n 1 52 GLY n 1 53 PRO n 1 54 ALA n 1 55 PRO n 1 56 ALA n 1 57 THR n 1 58 GLN n 1 59 SER n 1 60 TYR n 1 61 LEU n 1 62 GLN n 1 63 ILE n 1 64 PRO n 1 65 ALA n 1 66 ILE n 1 67 ILE n 1 68 ALA n 1 69 ALA n 1 70 ALA n 1 71 GLU n 1 72 VAL n 1 73 THR n 1 74 GLY n 1 75 ALA n 1 76 THR n 1 77 ALA n 1 78 ILE n 1 79 HIS n 1 80 PRO n 1 81 GLY n 1 82 TYR n 1 83 GLY n 1 84 PHE n 1 85 LEU n 1 86 ALA n 1 87 GLU n 1 88 ASN n 1 89 ALA n 1 90 ASP n 1 91 PHE n 1 92 ALA n 1 93 GLU n 1 94 GLN n 1 95 ILE n 1 96 GLU n 1 97 ARG n 1 98 SER n 1 99 GLY n 1 100 PHE n 1 101 THR n 1 102 PHE n 1 103 VAL n 1 104 GLY n 1 105 PRO n 1 106 THR n 1 107 ALA n 1 108 GLU n 1 109 VAL n 1 110 ILE n 1 111 ARG n 1 112 LEU n 1 113 MET n 1 114 GLY n 1 115 ASP n 1 116 LYS n 1 117 VAL n 1 118 SER n 1 119 ALA n 1 120 LYS n 1 121 ASP n 1 122 ALA n 1 123 MET n 1 124 LYS n 1 125 ARG n 1 126 ALA n 1 127 GLY n 1 128 VAL n 1 129 PRO n 1 130 THR n 1 131 VAL n 1 132 PRO n 1 133 GLY n 1 134 SER n 1 135 ASP n 1 136 GLY n 1 137 PRO n 1 138 LEU n 1 139 PRO n 1 140 GLU n 1 141 ASP n 1 142 GLU n 1 143 GLU n 1 144 THR n 1 145 ALA n 1 146 LEU n 1 147 ALA n 1 148 ILE n 1 149 ALA n 1 150 ARG n 1 151 GLU n 1 152 VAL n 1 153 GLY n 1 154 TYR n 1 155 PRO n 1 156 VAL n 1 157 ILE n 1 158 ILE n 1 159 LYS n 1 160 ALA n 1 161 ALA n 1 162 GLY n 1 163 GLY n 1 164 GLY n 1 165 GLY n 1 166 GLY n 1 167 ARG n 1 168 GLY n 1 169 MET n 1 170 ARG n 1 171 VAL n 1 172 VAL n 1 173 TYR n 1 174 ASP n 1 175 GLU n 1 176 SER n 1 177 GLU n 1 178 LEU n 1 179 ILE n 1 180 LYS n 1 181 SER n 1 182 ALA n 1 183 LYS n 1 184 LEU n 1 185 THR n 1 186 ARG n 1 187 THR n 1 188 GLU n 1 189 ALA n 1 190 GLY n 1 191 ALA n 1 192 ALA n 1 193 PHE n 1 194 GLY n 1 195 ASN n 1 196 PRO n 1 197 MET n 1 198 VAL n 1 199 TYR n 1 200 LEU n 1 201 GLU n 1 202 LYS n 1 203 PHE n 1 204 LEU n 1 205 THR n 1 206 ASN n 1 207 PRO n 1 208 ARG n 1 209 HIS n 1 210 VAL n 1 211 GLU n 1 212 VAL n 1 213 GLN n 1 214 VAL n 1 215 LEU n 1 216 SER n 1 217 ASP n 1 218 GLY n 1 219 GLN n 1 220 GLY n 1 221 ASN n 1 222 ALA n 1 223 ILE n 1 224 HIS n 1 225 LEU n 1 226 GLY n 1 227 ASP n 1 228 ARG n 1 229 ASP n 1 230 CYS n 1 231 SER n 1 232 LEU n 1 233 GLN n 1 234 ARG n 1 235 ARG n 1 236 HIS n 1 237 GLN n 1 238 LYS n 1 239 VAL n 1 240 ILE n 1 241 GLU n 1 242 GLU n 1 243 ALA n 1 244 PRO n 1 245 ALA n 1 246 PRO n 1 247 GLY n 1 248 ILE n 1 249 ASP n 1 250 GLU n 1 251 LYS n 1 252 ALA n 1 253 ARG n 1 254 GLN n 1 255 GLU n 1 256 VAL n 1 257 PHE n 1 258 ALA n 1 259 ARG n 1 260 CYS n 1 261 VAL n 1 262 GLN n 1 263 ALA n 1 264 CYS n 1 265 ILE n 1 266 GLU n 1 267 ILE n 1 268 GLY n 1 269 TYR n 1 270 ARG n 1 271 GLY n 1 272 ALA n 1 273 GLY n 1 274 THR n 1 275 PHE n 1 276 GLU n 1 277 PHE n 1 278 LEU n 1 279 TYR n 1 280 GLU n 1 281 ASN n 1 282 GLY n 1 283 ARG n 1 284 PHE n 1 285 TYR n 1 286 PHE n 1 287 ILE n 1 288 GLU n 1 289 MET n 1 290 ASN n 1 291 THR n 1 292 ARG n 1 293 VAL n 1 294 GLN n 1 295 VAL n 1 296 GLU n 1 297 HIS n 1 298 PRO n 1 299 VAL n 1 300 SER n 1 301 GLU n 1 302 MET n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ASP n 1 308 ILE n 1 309 VAL n 1 310 LYS n 1 311 GLU n 1 312 MET n 1 313 LEU n 1 314 ARG n 1 315 ILE n 1 316 ALA n 1 317 SER n 1 318 GLY n 1 319 GLU n 1 320 LYS n 1 321 LEU n 1 322 SER n 1 323 ILE n 1 324 ARG n 1 325 GLN n 1 326 GLU n 1 327 ASP n 1 328 VAL n 1 329 VAL n 1 330 ILE n 1 331 ARG n 1 332 GLY n 1 333 HIS n 1 334 ALA n 1 335 LEU n 1 336 GLU n 1 337 CYS n 1 338 ARG n 1 339 ILE n 1 340 ASN n 1 341 ALA n 1 342 GLU n 1 343 ASP n 1 344 PRO n 1 345 LYS n 1 346 THR n 1 347 PHE n 1 348 MET n 1 349 PRO n 1 350 SER n 1 351 PRO n 1 352 GLY n 1 353 LYS n 1 354 VAL n 1 355 LYS n 1 356 HIS n 1 357 PHE n 1 358 HIS n 1 359 ALA n 1 360 PRO n 1 361 GLY n 1 362 GLY n 1 363 ASN n 1 364 GLY n 1 365 VAL n 1 366 ARG n 1 367 VAL n 1 368 ASP n 1 369 SER n 1 370 HIS n 1 371 LEU n 1 372 TYR n 1 373 SER n 1 374 GLY n 1 375 TYR n 1 376 SER n 1 377 VAL n 1 378 PRO n 1 379 PRO n 1 380 ASN n 1 381 TYR n 1 382 ASP n 1 383 SER n 1 384 LEU n 1 385 VAL n 1 386 GLY n 1 387 LYS n 1 388 VAL n 1 389 ILE n 1 390 THR n 1 391 TYR n 1 392 GLY n 1 393 ALA n 1 394 ASP n 1 395 ARG n 1 396 ASP n 1 397 GLU n 1 398 ALA n 1 399 LEU n 1 400 ALA n 1 401 ARG n 1 402 MET n 1 403 ARG n 1 404 ASN n 1 405 ALA n 1 406 LEU n 1 407 ASP n 1 408 GLU n 1 409 LEU n 1 410 ILE n 1 411 VAL n 1 412 ASP n 1 413 GLY n 1 414 ILE n 1 415 LYS n 1 416 THR n 1 417 ASN n 1 418 THR n 1 419 GLU n 1 420 LEU n 1 421 HIS n 1 422 LYS n 1 423 ASP n 1 424 LEU n 1 425 VAL n 1 426 ARG n 1 427 ASP n 1 428 ALA n 1 429 ALA n 1 430 PHE n 1 431 CYS n 1 432 LYS n 1 433 GLY n 1 434 GLY n 1 435 VAL n 1 436 ASN n 1 437 ILE n 1 438 HIS n 1 439 TYR n 1 440 LEU n 1 441 GLU n 1 442 LYS n 1 443 LYS n 1 444 LEU n 1 445 GLY n 1 446 MET n 1 447 ASP n 1 448 LYS n 1 449 HIS n 1 450 GLY n 1 451 SER n 1 452 GLU n 1 453 ASN n 1 454 LEU n 1 455 TYR n 1 456 PHE n 1 457 GLN n 1 458 GLY n 1 459 HIS n 1 460 HIS n 1 461 HIS n 1 462 HIS n 1 463 HIS n 1 464 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PSEUDOMONAS AERUGINOSA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP ACCC_PSEAE 1 ? ? P37798 ? 2 PDB 2VQD 1 ? ? 2VQD ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VQD A 1 ? 449 ? P37798 1 ? 449 ? 1 449 2 2 2VQD A 450 ? 464 ? 2VQD 450 ? 464 ? 450 464 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AP2 non-polymer . 'PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER' ? 'C11 H17 N5 O9 P2' 425.228 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VQD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_percent_sol 37.02 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M HEPES (PH 7.0), 0.2M MGCL2, 15-20% PEG3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2007-05-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VQD _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 2.40 _reflns.number_obs 15777 _reflns.number_all ? _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.90 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 83.9 _reflns_shell.Rmerge_I_obs 0.35 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.86 _reflns_shell.pdbx_redundancy 3.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VQD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 14953 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 63.37 _refine.ls_d_res_high 2.41 _refine.ls_percent_reflns_obs 95.7 _refine.ls_R_factor_obs 0.182 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.178 _refine.ls_R_factor_R_free 0.252 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 791 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.916 _refine.B_iso_mean 33.49 _refine.aniso_B[1][1] 1.51000 _refine.aniso_B[2][2] 0.21000 _refine.aniso_B[3][3] -1.73000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1DV2' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.859 _refine.pdbx_overall_ESU_R_Free 0.311 _refine.overall_SU_ML 0.229 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 18.358 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3412 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 232 _refine_hist.number_atoms_total 3677 _refine_hist.d_res_high 2.41 _refine_hist.d_res_low 63.37 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.022 ? 3514 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 3247 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.212 1.981 ? 4756 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.758 3.000 ? 7541 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.853 5.000 ? 448 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.850 23.718 ? 156 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.604 15.000 ? 600 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.911 15.000 ? 29 'X-RAY DIFFRACTION' ? r_chiral_restr 0.065 0.200 ? 529 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 3943 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 697 'X-RAY DIFFRACTION' ? r_nbd_refined 0.188 0.200 ? 691 'X-RAY DIFFRACTION' ? r_nbd_other 0.176 0.200 ? 3225 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.165 0.200 ? 1687 'X-RAY DIFFRACTION' ? r_nbtor_other 0.082 0.200 ? 2141 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.149 0.200 ? 176 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.147 0.200 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.182 0.200 ? 84 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.172 0.200 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.543 1.500 ? 2883 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.619 2.000 ? 3558 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.021 3.000 ? 1469 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.503 4.500 ? 1198 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.41 _refine_ls_shell.d_res_low 2.47 _refine_ls_shell.number_reflns_R_work 884 _refine_ls_shell.R_factor_R_work 0.2240 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3210 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VQD _struct.title 'Crystal Structure of Biotin Carboxylase from Pseudomonas aeruginosa complexed with AMPCP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VQD _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;NUCLEOTIDE-BINDING, FATTY ACID BIOSYNTHESIS, LIPID SYNTHESIS, ATP-GRASP DOMAIN, BIOTIN CARBOXYLASE, LIGASE, BIOTIN, BACTERIA, ATP-BINDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 10 ? LEU A 24 ? ARG A 10 LEU A 24 1 ? 15 HELX_P HELX_P2 2 ALA A 35 ? ARG A 37 ? ALA A 35 ARG A 37 5 ? 3 HELX_P HELX_P3 3 LEU A 39 ? ALA A 45 ? LEU A 39 ALA A 45 1 ? 7 HELX_P HELX_P4 4 PRO A 55 ? SER A 59 ? PRO A 55 SER A 59 5 ? 5 HELX_P HELX_P5 5 GLN A 62 ? GLY A 74 ? GLN A 62 GLY A 74 1 ? 13 HELX_P HELX_P6 6 ASN A 88 ? SER A 98 ? ASN A 88 SER A 98 1 ? 11 HELX_P HELX_P7 7 THR A 106 ? ASP A 115 ? THR A 106 ASP A 115 1 ? 10 HELX_P HELX_P8 8 ASP A 115 ? ALA A 126 ? ASP A 115 ALA A 126 1 ? 12 HELX_P HELX_P9 9 ASP A 141 ? GLY A 153 ? ASP A 141 GLY A 153 1 ? 13 HELX_P HELX_P10 10 ASP A 174 ? SER A 176 ? ASP A 174 SER A 176 5 ? 3 HELX_P HELX_P11 11 GLU A 177 ? GLY A 194 ? GLU A 177 GLY A 194 1 ? 18 HELX_P HELX_P12 12 ASP A 249 ? GLY A 268 ? ASP A 249 GLY A 268 1 ? 20 HELX_P HELX_P13 13 GLU A 296 ? GLY A 305 ? GLU A 296 GLY A 305 1 ? 10 HELX_P HELX_P14 14 ASP A 307 ? SER A 317 ? ASP A 307 SER A 317 1 ? 11 HELX_P HELX_P15 15 ARG A 324 ? VAL A 328 ? ARG A 324 VAL A 328 5 ? 5 HELX_P HELX_P16 16 ASP A 394 ? LEU A 409 ? ASP A 394 LEU A 409 1 ? 16 HELX_P HELX_P17 17 ASN A 417 ? VAL A 425 ? ASN A 417 VAL A 425 1 ? 9 HELX_P HELX_P18 18 ASP A 427 ? GLY A 433 ? ASP A 427 GLY A 433 1 ? 7 HELX_P HELX_P19 19 HIS A 438 ? GLY A 445 ? HIS A 438 GLY A 445 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 276 OE1 ? ? ? 1_555 C MG . MG ? ? A GLU 276 A MG 1449 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc2 metalc ? ? A GLU 288 OE2 ? ? ? 1_555 C MG . MG ? ? A GLU 288 A MG 1449 1_555 ? ? ? ? ? ? ? 1.889 ? ? metalc3 metalc ? ? B AP2 . O2A ? ? ? 1_555 C MG . MG ? ? A AP2 1448 A MG 1449 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc4 metalc ? ? B AP2 . O1B ? ? ? 1_555 C MG . MG ? ? A AP2 1448 A MG 1449 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 1449 A HOH 2133 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 1449 A HOH 2139 1_555 ? ? ? ? ? ? ? 2.003 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 154 A . ? TYR 154 A PRO 155 A ? PRO 155 A 1 2.46 2 ALA 243 A . ? ALA 243 A PRO 244 A ? PRO 244 A 1 -10.32 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 3 ? AC ? 4 ? AD ? 2 ? AE ? 4 ? AF ? 2 ? AG ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel AE 2 3 ? anti-parallel AE 3 4 ? anti-parallel AF 1 2 ? anti-parallel AG 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLU A 47 ? GLY A 52 ? GLU A 47 GLY A 52 AA 2 LYS A 27 ? SER A 33 ? LYS A 27 SER A 33 AA 3 LYS A 4 ? ILE A 7 ? LYS A 4 ILE A 7 AA 4 ALA A 77 ? HIS A 79 ? ALA A 77 HIS A 79 AA 5 THR A 101 ? PHE A 102 ? THR A 101 PHE A 102 AB 1 MET A 169 ? VAL A 172 ? MET A 169 VAL A 172 AB 2 VAL A 156 ? ALA A 160 ? VAL A 156 ALA A 160 AB 3 VAL A 198 ? LYS A 202 ? VAL A 198 LYS A 202 AC 1 ALA A 222 ? ASP A 229 ? ALA A 222 ASP A 229 AC 2 ARG A 208 ? ASP A 217 ? ARG A 208 ASP A 217 AC 3 ARG A 270 ? GLU A 280 ? ARG A 270 GLU A 280 AC 4 ARG A 283 ? ASN A 290 ? ARG A 283 ASN A 290 AD 1 GLN A 233 ? ARG A 234 ? GLN A 233 ARG A 234 AD 2 GLN A 237 ? LYS A 238 ? GLN A 237 LYS A 238 AE 1 ILE A 240 ? ALA A 243 ? ILE A 240 ALA A 243 AE 2 HIS A 333 ? ASN A 340 ? HIS A 333 ASN A 340 AE 3 LEU A 384 ? GLY A 392 ? LEU A 384 GLY A 392 AE 4 VAL A 365 ? SER A 369 ? VAL A 365 SER A 369 AF 1 GLY A 352 ? VAL A 354 ? GLY A 352 VAL A 354 AF 2 TYR A 375 ? VAL A 377 ? TYR A 375 VAL A 377 AG 1 HIS A 356 ? HIS A 358 ? HIS A 356 HIS A 358 AG 2 ILE A 410 ? ASP A 412 ? ILE A 410 ASP A 412 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLU A 47 ? N GLU A 47 O THR A 28 ? O THR A 28 AA 2 3 N VAL A 29 ? N VAL A 29 O VAL A 5 ? O VAL A 5 AA 3 4 N LEU A 6 ? N LEU A 6 O ALA A 77 ? O ALA A 77 AA 4 5 N ILE A 78 ? N ILE A 78 O THR A 101 ? O THR A 101 AB 1 2 N VAL A 172 ? N VAL A 172 O VAL A 156 ? O VAL A 156 AB 2 3 N LYS A 159 ? N LYS A 159 O TYR A 199 ? O TYR A 199 AC 1 2 N ARG A 228 ? N ARG A 228 O GLU A 211 ? O GLU A 211 AC 2 3 N SER A 216 ? N SER A 216 O GLY A 271 ? O GLY A 271 AC 3 4 N GLU A 280 ? N GLU A 280 O ARG A 283 ? O ARG A 283 AD 1 2 N ARG A 234 ? N ARG A 234 O GLN A 237 ? O GLN A 237 AE 1 2 N ALA A 243 ? N ALA A 243 O ALA A 334 ? O ALA A 334 AE 2 3 O ILE A 339 ? O ILE A 339 N VAL A 385 ? N VAL A 385 AE 3 4 N ILE A 389 ? N ILE A 389 O ARG A 366 ? O ARG A 366 AF 1 2 N VAL A 354 ? N VAL A 354 O TYR A 375 ? O TYR A 375 AG 1 2 N HIS A 358 ? N HIS A 358 O ILE A 410 ? O ILE A 410 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 22 'BINDING SITE FOR RESIDUE AP2 A1448' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG A1449' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 A1450' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 LYS A 116 ? LYS A 116 . ? 1_555 ? 2 AC1 22 ILE A 157 ? ILE A 157 . ? 1_555 ? 3 AC1 22 LYS A 159 ? LYS A 159 . ? 1_555 ? 4 AC1 22 GLY A 163 ? GLY A 163 . ? 1_555 ? 5 AC1 22 GLY A 164 ? GLY A 164 . ? 1_555 ? 6 AC1 22 GLY A 165 ? GLY A 165 . ? 1_555 ? 7 AC1 22 GLY A 166 ? GLY A 166 . ? 1_555 ? 8 AC1 22 MET A 169 ? MET A 169 . ? 1_555 ? 9 AC1 22 GLU A 201 ? GLU A 201 . ? 1_555 ? 10 AC1 22 LYS A 202 ? LYS A 202 . ? 1_555 ? 11 AC1 22 PHE A 203 ? PHE A 203 . ? 1_555 ? 12 AC1 22 LEU A 204 ? LEU A 204 . ? 1_555 ? 13 AC1 22 HIS A 209 ? HIS A 209 . ? 1_555 ? 14 AC1 22 GLN A 233 ? GLN A 233 . ? 1_555 ? 15 AC1 22 HIS A 236 ? HIS A 236 . ? 1_555 ? 16 AC1 22 GLU A 276 ? GLU A 276 . ? 1_555 ? 17 AC1 22 LEU A 278 ? LEU A 278 . ? 1_555 ? 18 AC1 22 GLU A 288 ? GLU A 288 . ? 1_555 ? 19 AC1 22 ILE A 437 ? ILE A 437 . ? 1_555 ? 20 AC1 22 MG C . ? MG A 1449 . ? 1_555 ? 21 AC1 22 HOH E . ? HOH A 2092 . ? 1_555 ? 22 AC1 22 HOH E . ? HOH A 2231 . ? 1_555 ? 23 AC2 5 GLU A 276 ? GLU A 276 . ? 1_555 ? 24 AC2 5 GLU A 288 ? GLU A 288 . ? 1_555 ? 25 AC2 5 AP2 B . ? AP2 A 1448 . ? 1_555 ? 26 AC2 5 HOH E . ? HOH A 2133 . ? 1_555 ? 27 AC2 5 HOH E . ? HOH A 2139 . ? 1_555 ? 28 AC3 7 GLU A 87 ? GLU A 87 . ? 1_555 ? 29 AC3 7 MET A 113 ? MET A 113 . ? 1_555 ? 30 AC3 7 GLY A 114 ? GLY A 114 . ? 1_555 ? 31 AC3 7 GLY A 163 ? GLY A 163 . ? 1_555 ? 32 AC3 7 GLU A 288 ? GLU A 288 . ? 1_555 ? 33 AC3 7 MET A 289 ? MET A 289 . ? 1_555 ? 34 AC3 7 HOH E . ? HOH A 2140 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VQD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VQD _atom_sites.fract_transf_matrix[1][1] 0.015570 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007887 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020049 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 MET 40 40 40 MET MET A . n A 1 41 HIS 41 41 41 HIS HIS A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 MET 113 113 113 MET MET A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 MET 123 123 123 MET MET A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 PRO 129 129 129 PRO PRO A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 PRO 139 139 139 PRO PRO A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 MET 169 169 169 MET MET A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 GLY 194 194 194 GLY GLY A . n A 1 195 ASN 195 195 195 ASN ASN A . n A 1 196 PRO 196 196 196 PRO PRO A . n A 1 197 MET 197 197 197 MET MET A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 TYR 199 199 199 TYR TYR A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 HIS 209 209 209 HIS HIS A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 GLU 211 211 211 GLU GLU A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 ASP 217 217 217 ASP ASP A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 ASN 221 221 221 ASN ASN A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 HIS 224 224 224 HIS HIS A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 ARG 228 228 228 ARG ARG A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 CYS 230 230 230 CYS CYS A . n A 1 231 SER 231 231 231 SER SER A . n A 1 232 LEU 232 232 232 LEU LEU A . n A 1 233 GLN 233 233 233 GLN GLN A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 ARG 235 235 235 ARG ARG A . n A 1 236 HIS 236 236 236 HIS HIS A . n A 1 237 GLN 237 237 237 GLN GLN A . n A 1 238 LYS 238 238 238 LYS LYS A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 ILE 240 240 240 ILE ILE A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 ALA 243 243 243 ALA ALA A . n A 1 244 PRO 244 244 244 PRO PRO A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 PRO 246 246 246 PRO PRO A . n A 1 247 GLY 247 247 247 GLY GLY A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 ASP 249 249 249 ASP ASP A . n A 1 250 GLU 250 250 250 GLU GLU A . n A 1 251 LYS 251 251 251 LYS LYS A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 GLN 254 254 254 GLN GLN A . n A 1 255 GLU 255 255 255 GLU GLU A . n A 1 256 VAL 256 256 256 VAL VAL A . n A 1 257 PHE 257 257 257 PHE PHE A . n A 1 258 ALA 258 258 258 ALA ALA A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 CYS 260 260 260 CYS CYS A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 ALA 263 263 263 ALA ALA A . n A 1 264 CYS 264 264 264 CYS CYS A . n A 1 265 ILE 265 265 265 ILE ILE A . n A 1 266 GLU 266 266 266 GLU GLU A . n A 1 267 ILE 267 267 267 ILE ILE A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 TYR 269 269 269 TYR TYR A . n A 1 270 ARG 270 270 270 ARG ARG A . n A 1 271 GLY 271 271 271 GLY GLY A . n A 1 272 ALA 272 272 272 ALA ALA A . n A 1 273 GLY 273 273 273 GLY GLY A . n A 1 274 THR 274 274 274 THR THR A . n A 1 275 PHE 275 275 275 PHE PHE A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 PHE 277 277 277 PHE PHE A . n A 1 278 LEU 278 278 278 LEU LEU A . n A 1 279 TYR 279 279 279 TYR TYR A . n A 1 280 GLU 280 280 280 GLU GLU A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 GLY 282 282 282 GLY GLY A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 PHE 284 284 284 PHE PHE A . n A 1 285 TYR 285 285 285 TYR TYR A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 ILE 287 287 287 ILE ILE A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 MET 289 289 289 MET MET A . n A 1 290 ASN 290 290 290 ASN ASN A . n A 1 291 THR 291 291 291 THR THR A . n A 1 292 ARG 292 292 292 ARG ARG A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 GLN 294 294 294 GLN GLN A . n A 1 295 VAL 295 295 295 VAL VAL A . n A 1 296 GLU 296 296 296 GLU GLU A . n A 1 297 HIS 297 297 297 HIS HIS A . n A 1 298 PRO 298 298 298 PRO PRO A . n A 1 299 VAL 299 299 299 VAL VAL A . n A 1 300 SER 300 300 300 SER SER A . n A 1 301 GLU 301 301 301 GLU GLU A . n A 1 302 MET 302 302 302 MET MET A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 ASP 307 307 307 ASP ASP A . n A 1 308 ILE 308 308 308 ILE ILE A . n A 1 309 VAL 309 309 309 VAL VAL A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 GLU 311 311 311 GLU GLU A . n A 1 312 MET 312 312 312 MET MET A . n A 1 313 LEU 313 313 313 LEU LEU A . n A 1 314 ARG 314 314 314 ARG ARG A . n A 1 315 ILE 315 315 315 ILE ILE A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 SER 317 317 317 SER SER A . n A 1 318 GLY 318 318 318 GLY GLY A . n A 1 319 GLU 319 319 319 GLU GLU A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 LEU 321 321 321 LEU LEU A . n A 1 322 SER 322 322 322 SER SER A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 ARG 324 324 324 ARG ARG A . n A 1 325 GLN 325 325 325 GLN GLN A . n A 1 326 GLU 326 326 326 GLU GLU A . n A 1 327 ASP 327 327 327 ASP ASP A . n A 1 328 VAL 328 328 328 VAL VAL A . n A 1 329 VAL 329 329 329 VAL VAL A . n A 1 330 ILE 330 330 330 ILE ILE A . n A 1 331 ARG 331 331 331 ARG ARG A . n A 1 332 GLY 332 332 332 GLY GLY A . n A 1 333 HIS 333 333 333 HIS HIS A . n A 1 334 ALA 334 334 334 ALA ALA A . n A 1 335 LEU 335 335 335 LEU LEU A . n A 1 336 GLU 336 336 336 GLU GLU A . n A 1 337 CYS 337 337 337 CYS CYS A . n A 1 338 ARG 338 338 338 ARG ARG A . n A 1 339 ILE 339 339 339 ILE ILE A . n A 1 340 ASN 340 340 340 ASN ASN A . n A 1 341 ALA 341 341 341 ALA ALA A . n A 1 342 GLU 342 342 342 GLU GLU A . n A 1 343 ASP 343 343 343 ASP ASP A . n A 1 344 PRO 344 344 344 PRO PRO A . n A 1 345 LYS 345 345 345 LYS LYS A . n A 1 346 THR 346 346 346 THR THR A . n A 1 347 PHE 347 347 347 PHE PHE A . n A 1 348 MET 348 348 348 MET MET A . n A 1 349 PRO 349 349 349 PRO PRO A . n A 1 350 SER 350 350 350 SER SER A . n A 1 351 PRO 351 351 351 PRO PRO A . n A 1 352 GLY 352 352 352 GLY GLY A . n A 1 353 LYS 353 353 353 LYS LYS A . n A 1 354 VAL 354 354 354 VAL VAL A . n A 1 355 LYS 355 355 355 LYS LYS A . n A 1 356 HIS 356 356 356 HIS HIS A . n A 1 357 PHE 357 357 357 PHE PHE A . n A 1 358 HIS 358 358 358 HIS HIS A . n A 1 359 ALA 359 359 359 ALA ALA A . n A 1 360 PRO 360 360 360 PRO PRO A . n A 1 361 GLY 361 361 361 GLY GLY A . n A 1 362 GLY 362 362 362 GLY GLY A . n A 1 363 ASN 363 363 363 ASN ASN A . n A 1 364 GLY 364 364 364 GLY GLY A . n A 1 365 VAL 365 365 365 VAL VAL A . n A 1 366 ARG 366 366 366 ARG ARG A . n A 1 367 VAL 367 367 367 VAL VAL A . n A 1 368 ASP 368 368 368 ASP ASP A . n A 1 369 SER 369 369 369 SER SER A . n A 1 370 HIS 370 370 370 HIS HIS A . n A 1 371 LEU 371 371 371 LEU LEU A . n A 1 372 TYR 372 372 372 TYR TYR A . n A 1 373 SER 373 373 373 SER SER A . n A 1 374 GLY 374 374 374 GLY GLY A . n A 1 375 TYR 375 375 375 TYR TYR A . n A 1 376 SER 376 376 376 SER SER A . n A 1 377 VAL 377 377 377 VAL VAL A . n A 1 378 PRO 378 378 378 PRO PRO A . n A 1 379 PRO 379 379 379 PRO PRO A . n A 1 380 ASN 380 380 380 ASN ASN A . n A 1 381 TYR 381 381 381 TYR TYR A . n A 1 382 ASP 382 382 382 ASP ASP A . n A 1 383 SER 383 383 383 SER SER A . n A 1 384 LEU 384 384 384 LEU LEU A . n A 1 385 VAL 385 385 385 VAL VAL A . n A 1 386 GLY 386 386 386 GLY GLY A . n A 1 387 LYS 387 387 387 LYS LYS A . n A 1 388 VAL 388 388 388 VAL VAL A . n A 1 389 ILE 389 389 389 ILE ILE A . n A 1 390 THR 390 390 390 THR THR A . n A 1 391 TYR 391 391 391 TYR TYR A . n A 1 392 GLY 392 392 392 GLY GLY A . n A 1 393 ALA 393 393 393 ALA ALA A . n A 1 394 ASP 394 394 394 ASP ASP A . n A 1 395 ARG 395 395 395 ARG ARG A . n A 1 396 ASP 396 396 396 ASP ASP A . n A 1 397 GLU 397 397 397 GLU GLU A . n A 1 398 ALA 398 398 398 ALA ALA A . n A 1 399 LEU 399 399 399 LEU LEU A . n A 1 400 ALA 400 400 400 ALA ALA A . n A 1 401 ARG 401 401 401 ARG ARG A . n A 1 402 MET 402 402 402 MET MET A . n A 1 403 ARG 403 403 403 ARG ARG A . n A 1 404 ASN 404 404 404 ASN ASN A . n A 1 405 ALA 405 405 405 ALA ALA A . n A 1 406 LEU 406 406 406 LEU LEU A . n A 1 407 ASP 407 407 407 ASP ASP A . n A 1 408 GLU 408 408 408 GLU GLU A . n A 1 409 LEU 409 409 409 LEU LEU A . n A 1 410 ILE 410 410 410 ILE ILE A . n A 1 411 VAL 411 411 411 VAL VAL A . n A 1 412 ASP 412 412 412 ASP ASP A . n A 1 413 GLY 413 413 413 GLY GLY A . n A 1 414 ILE 414 414 414 ILE ILE A . n A 1 415 LYS 415 415 415 LYS LYS A . n A 1 416 THR 416 416 416 THR THR A . n A 1 417 ASN 417 417 417 ASN ASN A . n A 1 418 THR 418 418 418 THR THR A . n A 1 419 GLU 419 419 419 GLU GLU A . n A 1 420 LEU 420 420 420 LEU LEU A . n A 1 421 HIS 421 421 421 HIS HIS A . n A 1 422 LYS 422 422 422 LYS LYS A . n A 1 423 ASP 423 423 423 ASP ASP A . n A 1 424 LEU 424 424 424 LEU LEU A . n A 1 425 VAL 425 425 425 VAL VAL A . n A 1 426 ARG 426 426 426 ARG ARG A . n A 1 427 ASP 427 427 427 ASP ASP A . n A 1 428 ALA 428 428 428 ALA ALA A . n A 1 429 ALA 429 429 429 ALA ALA A . n A 1 430 PHE 430 430 430 PHE PHE A . n A 1 431 CYS 431 431 431 CYS CYS A . n A 1 432 LYS 432 432 432 LYS LYS A . n A 1 433 GLY 433 433 433 GLY GLY A . n A 1 434 GLY 434 434 434 GLY GLY A . n A 1 435 VAL 435 435 435 VAL VAL A . n A 1 436 ASN 436 436 436 ASN ASN A . n A 1 437 ILE 437 437 437 ILE ILE A . n A 1 438 HIS 438 438 438 HIS HIS A . n A 1 439 TYR 439 439 439 TYR TYR A . n A 1 440 LEU 440 440 440 LEU LEU A . n A 1 441 GLU 441 441 441 GLU GLU A . n A 1 442 LYS 442 442 442 LYS LYS A . n A 1 443 LYS 443 443 443 LYS LYS A . n A 1 444 LEU 444 444 444 LEU LEU A . n A 1 445 GLY 445 445 445 GLY GLY A . n A 1 446 MET 446 446 446 MET MET A . n A 1 447 ASP 447 447 447 ASP ASP A . n A 1 448 LYS 448 448 ? ? ? A . n A 1 449 HIS 449 449 ? ? ? A . n A 1 450 GLY 450 450 ? ? ? A . n A 1 451 SER 451 451 ? ? ? A . n A 1 452 GLU 452 452 ? ? ? A . n A 1 453 ASN 453 453 ? ? ? A . n A 1 454 LEU 454 454 ? ? ? A . n A 1 455 TYR 455 455 ? ? ? A . n A 1 456 PHE 456 456 ? ? ? A . n A 1 457 GLN 457 457 ? ? ? A . n A 1 458 GLY 458 458 ? ? ? A . n A 1 459 HIS 459 459 ? ? ? A . n A 1 460 HIS 460 460 ? ? ? A . n A 1 461 HIS 461 461 ? ? ? A . n A 1 462 HIS 462 462 ? ? ? A . n A 1 463 HIS 463 463 ? ? ? A . n A 1 464 HIS 464 464 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AP2 1 1448 1448 AP2 AP2 A . C 3 MG 1 1449 1449 MG MG A . D 4 SO4 1 1450 1450 SO4 SO4 A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . E 5 HOH 84 2084 2084 HOH HOH A . E 5 HOH 85 2085 2085 HOH HOH A . E 5 HOH 86 2086 2086 HOH HOH A . E 5 HOH 87 2087 2087 HOH HOH A . E 5 HOH 88 2088 2088 HOH HOH A . E 5 HOH 89 2089 2089 HOH HOH A . E 5 HOH 90 2090 2090 HOH HOH A . E 5 HOH 91 2091 2091 HOH HOH A . E 5 HOH 92 2092 2092 HOH HOH A . E 5 HOH 93 2093 2093 HOH HOH A . E 5 HOH 94 2094 2094 HOH HOH A . E 5 HOH 95 2095 2095 HOH HOH A . E 5 HOH 96 2096 2096 HOH HOH A . E 5 HOH 97 2097 2097 HOH HOH A . E 5 HOH 98 2098 2098 HOH HOH A . E 5 HOH 99 2099 2099 HOH HOH A . E 5 HOH 100 2100 2100 HOH HOH A . E 5 HOH 101 2101 2101 HOH HOH A . E 5 HOH 102 2102 2102 HOH HOH A . E 5 HOH 103 2103 2103 HOH HOH A . E 5 HOH 104 2104 2104 HOH HOH A . E 5 HOH 105 2105 2105 HOH HOH A . E 5 HOH 106 2106 2106 HOH HOH A . E 5 HOH 107 2107 2107 HOH HOH A . E 5 HOH 108 2108 2108 HOH HOH A . E 5 HOH 109 2109 2109 HOH HOH A . E 5 HOH 110 2110 2110 HOH HOH A . E 5 HOH 111 2111 2111 HOH HOH A . E 5 HOH 112 2112 2112 HOH HOH A . E 5 HOH 113 2113 2113 HOH HOH A . E 5 HOH 114 2114 2114 HOH HOH A . E 5 HOH 115 2115 2115 HOH HOH A . E 5 HOH 116 2116 2116 HOH HOH A . E 5 HOH 117 2117 2117 HOH HOH A . E 5 HOH 118 2118 2118 HOH HOH A . E 5 HOH 119 2119 2119 HOH HOH A . E 5 HOH 120 2120 2120 HOH HOH A . E 5 HOH 121 2121 2121 HOH HOH A . E 5 HOH 122 2122 2122 HOH HOH A . E 5 HOH 123 2123 2123 HOH HOH A . E 5 HOH 124 2124 2124 HOH HOH A . E 5 HOH 125 2125 2125 HOH HOH A . E 5 HOH 126 2126 2126 HOH HOH A . E 5 HOH 127 2127 2127 HOH HOH A . E 5 HOH 128 2128 2128 HOH HOH A . E 5 HOH 129 2129 2129 HOH HOH A . E 5 HOH 130 2130 2130 HOH HOH A . E 5 HOH 131 2131 2131 HOH HOH A . E 5 HOH 132 2132 2132 HOH HOH A . E 5 HOH 133 2133 2133 HOH HOH A . E 5 HOH 134 2134 2134 HOH HOH A . E 5 HOH 135 2135 2135 HOH HOH A . E 5 HOH 136 2136 2136 HOH HOH A . E 5 HOH 137 2137 2137 HOH HOH A . E 5 HOH 138 2138 2138 HOH HOH A . E 5 HOH 139 2139 2139 HOH HOH A . E 5 HOH 140 2140 2140 HOH HOH A . E 5 HOH 141 2141 2141 HOH HOH A . E 5 HOH 142 2142 2142 HOH HOH A . E 5 HOH 143 2143 2143 HOH HOH A . E 5 HOH 144 2144 2144 HOH HOH A . E 5 HOH 145 2145 2145 HOH HOH A . E 5 HOH 146 2146 2146 HOH HOH A . E 5 HOH 147 2147 2147 HOH HOH A . E 5 HOH 148 2148 2148 HOH HOH A . E 5 HOH 149 2149 2149 HOH HOH A . E 5 HOH 150 2150 2150 HOH HOH A . E 5 HOH 151 2151 2151 HOH HOH A . E 5 HOH 152 2152 2152 HOH HOH A . E 5 HOH 153 2153 2153 HOH HOH A . E 5 HOH 154 2154 2154 HOH HOH A . E 5 HOH 155 2155 2155 HOH HOH A . E 5 HOH 156 2156 2156 HOH HOH A . E 5 HOH 157 2157 2157 HOH HOH A . E 5 HOH 158 2158 2158 HOH HOH A . E 5 HOH 159 2159 2159 HOH HOH A . E 5 HOH 160 2160 2160 HOH HOH A . E 5 HOH 161 2161 2161 HOH HOH A . E 5 HOH 162 2162 2162 HOH HOH A . E 5 HOH 163 2163 2163 HOH HOH A . E 5 HOH 164 2164 2164 HOH HOH A . E 5 HOH 165 2165 2165 HOH HOH A . E 5 HOH 166 2166 2166 HOH HOH A . E 5 HOH 167 2167 2167 HOH HOH A . E 5 HOH 168 2168 2168 HOH HOH A . E 5 HOH 169 2169 2169 HOH HOH A . E 5 HOH 170 2170 2170 HOH HOH A . E 5 HOH 171 2171 2171 HOH HOH A . E 5 HOH 172 2172 2172 HOH HOH A . E 5 HOH 173 2173 2173 HOH HOH A . E 5 HOH 174 2174 2174 HOH HOH A . E 5 HOH 175 2175 2175 HOH HOH A . E 5 HOH 176 2176 2176 HOH HOH A . E 5 HOH 177 2177 2177 HOH HOH A . E 5 HOH 178 2178 2178 HOH HOH A . E 5 HOH 179 2179 2179 HOH HOH A . E 5 HOH 180 2180 2180 HOH HOH A . E 5 HOH 181 2181 2181 HOH HOH A . E 5 HOH 182 2182 2182 HOH HOH A . E 5 HOH 183 2183 2183 HOH HOH A . E 5 HOH 184 2184 2184 HOH HOH A . E 5 HOH 185 2185 2185 HOH HOH A . E 5 HOH 186 2186 2186 HOH HOH A . E 5 HOH 187 2187 2187 HOH HOH A . E 5 HOH 188 2188 2188 HOH HOH A . E 5 HOH 189 2189 2189 HOH HOH A . E 5 HOH 190 2190 2190 HOH HOH A . E 5 HOH 191 2191 2191 HOH HOH A . E 5 HOH 192 2192 2192 HOH HOH A . E 5 HOH 193 2193 2193 HOH HOH A . E 5 HOH 194 2194 2194 HOH HOH A . E 5 HOH 195 2195 2195 HOH HOH A . E 5 HOH 196 2196 2196 HOH HOH A . E 5 HOH 197 2197 2197 HOH HOH A . E 5 HOH 198 2198 2198 HOH HOH A . E 5 HOH 199 2199 2199 HOH HOH A . E 5 HOH 200 2200 2200 HOH HOH A . E 5 HOH 201 2201 2201 HOH HOH A . E 5 HOH 202 2202 2202 HOH HOH A . E 5 HOH 203 2203 2203 HOH HOH A . E 5 HOH 204 2204 2204 HOH HOH A . E 5 HOH 205 2205 2205 HOH HOH A . E 5 HOH 206 2206 2206 HOH HOH A . E 5 HOH 207 2207 2207 HOH HOH A . E 5 HOH 208 2208 2208 HOH HOH A . E 5 HOH 209 2209 2209 HOH HOH A . E 5 HOH 210 2210 2210 HOH HOH A . E 5 HOH 211 2211 2211 HOH HOH A . E 5 HOH 212 2212 2212 HOH HOH A . E 5 HOH 213 2213 2213 HOH HOH A . E 5 HOH 214 2214 2214 HOH HOH A . E 5 HOH 215 2215 2215 HOH HOH A . E 5 HOH 216 2216 2216 HOH HOH A . E 5 HOH 217 2217 2217 HOH HOH A . E 5 HOH 218 2218 2218 HOH HOH A . E 5 HOH 219 2219 2219 HOH HOH A . E 5 HOH 220 2220 2220 HOH HOH A . E 5 HOH 221 2221 2221 HOH HOH A . E 5 HOH 222 2222 2222 HOH HOH A . E 5 HOH 223 2223 2223 HOH HOH A . E 5 HOH 224 2224 2224 HOH HOH A . E 5 HOH 225 2225 2225 HOH HOH A . E 5 HOH 226 2226 2226 HOH HOH A . E 5 HOH 227 2227 2227 HOH HOH A . E 5 HOH 228 2228 2228 HOH HOH A . E 5 HOH 229 2229 2229 HOH HOH A . E 5 HOH 230 2230 2230 HOH HOH A . E 5 HOH 231 2231 2231 HOH HOH A . E 5 HOH 232 2232 2232 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2176 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 276 ? A GLU 276 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 OE2 ? A GLU 288 ? A GLU 288 ? 1_555 78.2 ? 2 OE1 ? A GLU 276 ? A GLU 276 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O2A ? B AP2 . ? A AP2 1448 ? 1_555 80.2 ? 3 OE2 ? A GLU 288 ? A GLU 288 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O2A ? B AP2 . ? A AP2 1448 ? 1_555 71.8 ? 4 OE1 ? A GLU 276 ? A GLU 276 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O1B ? B AP2 . ? A AP2 1448 ? 1_555 153.8 ? 5 OE2 ? A GLU 288 ? A GLU 288 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O1B ? B AP2 . ? A AP2 1448 ? 1_555 91.2 ? 6 O2A ? B AP2 . ? A AP2 1448 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O1B ? B AP2 . ? A AP2 1448 ? 1_555 73.7 ? 7 OE1 ? A GLU 276 ? A GLU 276 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2133 ? 1_555 83.6 ? 8 OE2 ? A GLU 288 ? A GLU 288 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2133 ? 1_555 159.3 ? 9 O2A ? B AP2 . ? A AP2 1448 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2133 ? 1_555 95.6 ? 10 O1B ? B AP2 . ? A AP2 1448 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2133 ? 1_555 101.1 ? 11 OE1 ? A GLU 276 ? A GLU 276 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2139 ? 1_555 93.3 ? 12 OE2 ? A GLU 288 ? A GLU 288 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2139 ? 1_555 80.3 ? 13 O2A ? B AP2 . ? A AP2 1448 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2139 ? 1_555 152.0 ? 14 O1B ? B AP2 . ? A AP2 1448 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2139 ? 1_555 108.5 ? 15 O ? E HOH . ? A HOH 2133 ? 1_555 MG ? C MG . ? A MG 1449 ? 1_555 O ? E HOH . ? A HOH 2139 ? 1_555 110.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-07-05 4 'Structure model' 1 3 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_struct_conn_angle 8 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.type' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_database_status.status_code_sf' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 6.1219 20.3449 13.0923 -0.0552 -0.0555 -0.0993 -0.0093 -0.0309 -0.0170 0.5996 1.9352 0.3516 0.0165 -0.1497 -0.3972 0.0393 0.0107 0.0827 0.2110 -0.0420 -0.1140 -0.0783 -0.0012 0.0027 'X-RAY DIFFRACTION' 2 ? refined 0.3358 31.0848 9.8703 0.0057 0.0004 0.0031 -0.0160 0.0067 -0.0096 19.7093 30.0504 14.9986 -0.3605 17.1687 0.8228 0.6192 -0.5199 0.7931 -0.1356 -0.8025 1.4562 -0.2469 0.4023 0.1833 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 447 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 1448 ? ? A 1448 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2VQD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER (AP2): NON-HYDROLYZABLE ADP ANALOG ; _pdbx_entry_details.sequence_details 'C-TERMINAL HIS-TAG PRESENT' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 9 ? ? -168.00 -168.39 2 1 PRO A 53 ? ? -69.66 -174.39 3 1 SER A 59 ? ? -136.11 -84.29 4 1 PHE A 84 ? ? 44.21 -111.93 5 1 ASN A 281 ? B 35.50 59.73 6 1 THR A 291 ? ? -101.55 58.37 7 1 TYR A 381 ? ? -126.26 -169.28 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LEU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 444 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 445 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 38.81 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2013 ? 7.12 . 2 1 O ? A HOH 2019 ? 6.21 . 3 1 O ? A HOH 2023 ? 7.20 . 4 1 O ? A HOH 2056 ? 5.86 . 5 1 O ? A HOH 2074 ? 6.45 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 448 ? A LYS 448 2 1 Y 1 A HIS 449 ? A HIS 449 3 1 Y 1 A GLY 450 ? A GLY 450 4 1 Y 1 A SER 451 ? A SER 451 5 1 Y 1 A GLU 452 ? A GLU 452 6 1 Y 1 A ASN 453 ? A ASN 453 7 1 Y 1 A LEU 454 ? A LEU 454 8 1 Y 1 A TYR 455 ? A TYR 455 9 1 Y 1 A PHE 456 ? A PHE 456 10 1 Y 1 A GLN 457 ? A GLN 457 11 1 Y 1 A GLY 458 ? A GLY 458 12 1 Y 1 A HIS 459 ? A HIS 459 13 1 Y 1 A HIS 460 ? A HIS 460 14 1 Y 1 A HIS 461 ? A HIS 461 15 1 Y 1 A HIS 462 ? A HIS 462 16 1 Y 1 A HIS 463 ? A HIS 463 17 1 Y 1 A HIS 464 ? A HIS 464 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AP2 PB P N N 14 AP2 O1B O N N 15 AP2 O2B O N N 16 AP2 O3B O N N 17 AP2 C3A C N N 18 AP2 PA P N R 19 AP2 O1A O N N 20 AP2 O2A O N N 21 AP2 "O5'" O N N 22 AP2 "C5'" C N N 23 AP2 "C4'" C N R 24 AP2 "O4'" O N N 25 AP2 "C3'" C N S 26 AP2 "O3'" O N N 27 AP2 "C2'" C N R 28 AP2 "O2'" O N N 29 AP2 "C1'" C N R 30 AP2 N9 N Y N 31 AP2 C8 C Y N 32 AP2 N7 N Y N 33 AP2 C5 C Y N 34 AP2 C6 C Y N 35 AP2 N6 N N N 36 AP2 N1 N Y N 37 AP2 C2 C Y N 38 AP2 N3 N Y N 39 AP2 C4 C Y N 40 AP2 HOB2 H N N 41 AP2 HOB3 H N N 42 AP2 H3A1 H N N 43 AP2 H3A2 H N N 44 AP2 HOA2 H N N 45 AP2 "H5'1" H N N 46 AP2 "H5'2" H N N 47 AP2 "H4'" H N N 48 AP2 "H3'" H N N 49 AP2 "HO3'" H N N 50 AP2 "H2'" H N N 51 AP2 "HO2'" H N N 52 AP2 "H1'" H N N 53 AP2 H8 H N N 54 AP2 HN61 H N N 55 AP2 HN62 H N N 56 AP2 H2 H N N 57 ARG N N N N 58 ARG CA C N S 59 ARG C C N N 60 ARG O O N N 61 ARG CB C N N 62 ARG CG C N N 63 ARG CD C N N 64 ARG NE N N N 65 ARG CZ C N N 66 ARG NH1 N N N 67 ARG NH2 N N N 68 ARG OXT O N N 69 ARG H H N N 70 ARG H2 H N N 71 ARG HA H N N 72 ARG HB2 H N N 73 ARG HB3 H N N 74 ARG HG2 H N N 75 ARG HG3 H N N 76 ARG HD2 H N N 77 ARG HD3 H N N 78 ARG HE H N N 79 ARG HH11 H N N 80 ARG HH12 H N N 81 ARG HH21 H N N 82 ARG HH22 H N N 83 ARG HXT H N N 84 ASN N N N N 85 ASN CA C N S 86 ASN C C N N 87 ASN O O N N 88 ASN CB C N N 89 ASN CG C N N 90 ASN OD1 O N N 91 ASN ND2 N N N 92 ASN OXT O N N 93 ASN H H N N 94 ASN H2 H N N 95 ASN HA H N N 96 ASN HB2 H N N 97 ASN HB3 H N N 98 ASN HD21 H N N 99 ASN HD22 H N N 100 ASN HXT H N N 101 ASP N N N N 102 ASP CA C N S 103 ASP C C N N 104 ASP O O N N 105 ASP CB C N N 106 ASP CG C N N 107 ASP OD1 O N N 108 ASP OD2 O N N 109 ASP OXT O N N 110 ASP H H N N 111 ASP H2 H N N 112 ASP HA H N N 113 ASP HB2 H N N 114 ASP HB3 H N N 115 ASP HD2 H N N 116 ASP HXT H N N 117 CYS N N N N 118 CYS CA C N R 119 CYS C C N N 120 CYS O O N N 121 CYS CB C N N 122 CYS SG S N N 123 CYS OXT O N N 124 CYS H H N N 125 CYS H2 H N N 126 CYS HA H N N 127 CYS HB2 H N N 128 CYS HB3 H N N 129 CYS HG H N N 130 CYS HXT H N N 131 GLN N N N N 132 GLN CA C N S 133 GLN C C N N 134 GLN O O N N 135 GLN CB C N N 136 GLN CG C N N 137 GLN CD C N N 138 GLN OE1 O N N 139 GLN NE2 N N N 140 GLN OXT O N N 141 GLN H H N N 142 GLN H2 H N N 143 GLN HA H N N 144 GLN HB2 H N N 145 GLN HB3 H N N 146 GLN HG2 H N N 147 GLN HG3 H N N 148 GLN HE21 H N N 149 GLN HE22 H N N 150 GLN HXT H N N 151 GLU N N N N 152 GLU CA C N S 153 GLU C C N N 154 GLU O O N N 155 GLU CB C N N 156 GLU CG C N N 157 GLU CD C N N 158 GLU OE1 O N N 159 GLU OE2 O N N 160 GLU OXT O N N 161 GLU H H N N 162 GLU H2 H N N 163 GLU HA H N N 164 GLU HB2 H N N 165 GLU HB3 H N N 166 GLU HG2 H N N 167 GLU HG3 H N N 168 GLU HE2 H N N 169 GLU HXT H N N 170 GLY N N N N 171 GLY CA C N N 172 GLY C C N N 173 GLY O O N N 174 GLY OXT O N N 175 GLY H H N N 176 GLY H2 H N N 177 GLY HA2 H N N 178 GLY HA3 H N N 179 GLY HXT H N N 180 HIS N N N N 181 HIS CA C N S 182 HIS C C N N 183 HIS O O N N 184 HIS CB C N N 185 HIS CG C Y N 186 HIS ND1 N Y N 187 HIS CD2 C Y N 188 HIS CE1 C Y N 189 HIS NE2 N Y N 190 HIS OXT O N N 191 HIS H H N N 192 HIS H2 H N N 193 HIS HA H N N 194 HIS HB2 H N N 195 HIS HB3 H N N 196 HIS HD1 H N N 197 HIS HD2 H N N 198 HIS HE1 H N N 199 HIS HE2 H N N 200 HIS HXT H N N 201 HOH O O N N 202 HOH H1 H N N 203 HOH H2 H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 MG MG MG N N 294 PHE N N N N 295 PHE CA C N S 296 PHE C C N N 297 PHE O O N N 298 PHE CB C N N 299 PHE CG C Y N 300 PHE CD1 C Y N 301 PHE CD2 C Y N 302 PHE CE1 C Y N 303 PHE CE2 C Y N 304 PHE CZ C Y N 305 PHE OXT O N N 306 PHE H H N N 307 PHE H2 H N N 308 PHE HA H N N 309 PHE HB2 H N N 310 PHE HB3 H N N 311 PHE HD1 H N N 312 PHE HD2 H N N 313 PHE HE1 H N N 314 PHE HE2 H N N 315 PHE HZ H N N 316 PHE HXT H N N 317 PRO N N N N 318 PRO CA C N S 319 PRO C C N N 320 PRO O O N N 321 PRO CB C N N 322 PRO CG C N N 323 PRO CD C N N 324 PRO OXT O N N 325 PRO H H N N 326 PRO HA H N N 327 PRO HB2 H N N 328 PRO HB3 H N N 329 PRO HG2 H N N 330 PRO HG3 H N N 331 PRO HD2 H N N 332 PRO HD3 H N N 333 PRO HXT H N N 334 SER N N N N 335 SER CA C N S 336 SER C C N N 337 SER O O N N 338 SER CB C N N 339 SER OG O N N 340 SER OXT O N N 341 SER H H N N 342 SER H2 H N N 343 SER HA H N N 344 SER HB2 H N N 345 SER HB3 H N N 346 SER HG H N N 347 SER HXT H N N 348 SO4 S S N N 349 SO4 O1 O N N 350 SO4 O2 O N N 351 SO4 O3 O N N 352 SO4 O4 O N N 353 THR N N N N 354 THR CA C N S 355 THR C C N N 356 THR O O N N 357 THR CB C N R 358 THR OG1 O N N 359 THR CG2 C N N 360 THR OXT O N N 361 THR H H N N 362 THR H2 H N N 363 THR HA H N N 364 THR HB H N N 365 THR HG1 H N N 366 THR HG21 H N N 367 THR HG22 H N N 368 THR HG23 H N N 369 THR HXT H N N 370 TYR N N N N 371 TYR CA C N S 372 TYR C C N N 373 TYR O O N N 374 TYR CB C N N 375 TYR CG C Y N 376 TYR CD1 C Y N 377 TYR CD2 C Y N 378 TYR CE1 C Y N 379 TYR CE2 C Y N 380 TYR CZ C Y N 381 TYR OH O N N 382 TYR OXT O N N 383 TYR H H N N 384 TYR H2 H N N 385 TYR HA H N N 386 TYR HB2 H N N 387 TYR HB3 H N N 388 TYR HD1 H N N 389 TYR HD2 H N N 390 TYR HE1 H N N 391 TYR HE2 H N N 392 TYR HH H N N 393 TYR HXT H N N 394 VAL N N N N 395 VAL CA C N S 396 VAL C C N N 397 VAL O O N N 398 VAL CB C N N 399 VAL CG1 C N N 400 VAL CG2 C N N 401 VAL OXT O N N 402 VAL H H N N 403 VAL H2 H N N 404 VAL HA H N N 405 VAL HB H N N 406 VAL HG11 H N N 407 VAL HG12 H N N 408 VAL HG13 H N N 409 VAL HG21 H N N 410 VAL HG22 H N N 411 VAL HG23 H N N 412 VAL HXT H N N 413 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AP2 PB O1B doub N N 13 AP2 PB O2B sing N N 14 AP2 PB O3B sing N N 15 AP2 PB C3A sing N N 16 AP2 O2B HOB2 sing N N 17 AP2 O3B HOB3 sing N N 18 AP2 C3A PA sing N N 19 AP2 C3A H3A1 sing N N 20 AP2 C3A H3A2 sing N N 21 AP2 PA O1A doub N N 22 AP2 PA O2A sing N N 23 AP2 PA "O5'" sing N N 24 AP2 O2A HOA2 sing N N 25 AP2 "O5'" "C5'" sing N N 26 AP2 "C5'" "C4'" sing N N 27 AP2 "C5'" "H5'1" sing N N 28 AP2 "C5'" "H5'2" sing N N 29 AP2 "C4'" "O4'" sing N N 30 AP2 "C4'" "C3'" sing N N 31 AP2 "C4'" "H4'" sing N N 32 AP2 "O4'" "C1'" sing N N 33 AP2 "C3'" "O3'" sing N N 34 AP2 "C3'" "C2'" sing N N 35 AP2 "C3'" "H3'" sing N N 36 AP2 "O3'" "HO3'" sing N N 37 AP2 "C2'" "O2'" sing N N 38 AP2 "C2'" "C1'" sing N N 39 AP2 "C2'" "H2'" sing N N 40 AP2 "O2'" "HO2'" sing N N 41 AP2 "C1'" N9 sing N N 42 AP2 "C1'" "H1'" sing N N 43 AP2 N9 C8 sing Y N 44 AP2 N9 C4 sing Y N 45 AP2 C8 N7 doub Y N 46 AP2 C8 H8 sing N N 47 AP2 N7 C5 sing Y N 48 AP2 C5 C6 sing Y N 49 AP2 C5 C4 doub Y N 50 AP2 C6 N6 sing N N 51 AP2 C6 N1 doub Y N 52 AP2 N6 HN61 sing N N 53 AP2 N6 HN62 sing N N 54 AP2 N1 C2 sing Y N 55 AP2 C2 N3 doub Y N 56 AP2 C2 H2 sing N N 57 AP2 N3 C4 sing Y N 58 ARG N CA sing N N 59 ARG N H sing N N 60 ARG N H2 sing N N 61 ARG CA C sing N N 62 ARG CA CB sing N N 63 ARG CA HA sing N N 64 ARG C O doub N N 65 ARG C OXT sing N N 66 ARG CB CG sing N N 67 ARG CB HB2 sing N N 68 ARG CB HB3 sing N N 69 ARG CG CD sing N N 70 ARG CG HG2 sing N N 71 ARG CG HG3 sing N N 72 ARG CD NE sing N N 73 ARG CD HD2 sing N N 74 ARG CD HD3 sing N N 75 ARG NE CZ sing N N 76 ARG NE HE sing N N 77 ARG CZ NH1 sing N N 78 ARG CZ NH2 doub N N 79 ARG NH1 HH11 sing N N 80 ARG NH1 HH12 sing N N 81 ARG NH2 HH21 sing N N 82 ARG NH2 HH22 sing N N 83 ARG OXT HXT sing N N 84 ASN N CA sing N N 85 ASN N H sing N N 86 ASN N H2 sing N N 87 ASN CA C sing N N 88 ASN CA CB sing N N 89 ASN CA HA sing N N 90 ASN C O doub N N 91 ASN C OXT sing N N 92 ASN CB CG sing N N 93 ASN CB HB2 sing N N 94 ASN CB HB3 sing N N 95 ASN CG OD1 doub N N 96 ASN CG ND2 sing N N 97 ASN ND2 HD21 sing N N 98 ASN ND2 HD22 sing N N 99 ASN OXT HXT sing N N 100 ASP N CA sing N N 101 ASP N H sing N N 102 ASP N H2 sing N N 103 ASP CA C sing N N 104 ASP CA CB sing N N 105 ASP CA HA sing N N 106 ASP C O doub N N 107 ASP C OXT sing N N 108 ASP CB CG sing N N 109 ASP CB HB2 sing N N 110 ASP CB HB3 sing N N 111 ASP CG OD1 doub N N 112 ASP CG OD2 sing N N 113 ASP OD2 HD2 sing N N 114 ASP OXT HXT sing N N 115 CYS N CA sing N N 116 CYS N H sing N N 117 CYS N H2 sing N N 118 CYS CA C sing N N 119 CYS CA CB sing N N 120 CYS CA HA sing N N 121 CYS C O doub N N 122 CYS C OXT sing N N 123 CYS CB SG sing N N 124 CYS CB HB2 sing N N 125 CYS CB HB3 sing N N 126 CYS SG HG sing N N 127 CYS OXT HXT sing N N 128 GLN N CA sing N N 129 GLN N H sing N N 130 GLN N H2 sing N N 131 GLN CA C sing N N 132 GLN CA CB sing N N 133 GLN CA HA sing N N 134 GLN C O doub N N 135 GLN C OXT sing N N 136 GLN CB CG sing N N 137 GLN CB HB2 sing N N 138 GLN CB HB3 sing N N 139 GLN CG CD sing N N 140 GLN CG HG2 sing N N 141 GLN CG HG3 sing N N 142 GLN CD OE1 doub N N 143 GLN CD NE2 sing N N 144 GLN NE2 HE21 sing N N 145 GLN NE2 HE22 sing N N 146 GLN OXT HXT sing N N 147 GLU N CA sing N N 148 GLU N H sing N N 149 GLU N H2 sing N N 150 GLU CA C sing N N 151 GLU CA CB sing N N 152 GLU CA HA sing N N 153 GLU C O doub N N 154 GLU C OXT sing N N 155 GLU CB CG sing N N 156 GLU CB HB2 sing N N 157 GLU CB HB3 sing N N 158 GLU CG CD sing N N 159 GLU CG HG2 sing N N 160 GLU CG HG3 sing N N 161 GLU CD OE1 doub N N 162 GLU CD OE2 sing N N 163 GLU OE2 HE2 sing N N 164 GLU OXT HXT sing N N 165 GLY N CA sing N N 166 GLY N H sing N N 167 GLY N H2 sing N N 168 GLY CA C sing N N 169 GLY CA HA2 sing N N 170 GLY CA HA3 sing N N 171 GLY C O doub N N 172 GLY C OXT sing N N 173 GLY OXT HXT sing N N 174 HIS N CA sing N N 175 HIS N H sing N N 176 HIS N H2 sing N N 177 HIS CA C sing N N 178 HIS CA CB sing N N 179 HIS CA HA sing N N 180 HIS C O doub N N 181 HIS C OXT sing N N 182 HIS CB CG sing N N 183 HIS CB HB2 sing N N 184 HIS CB HB3 sing N N 185 HIS CG ND1 sing Y N 186 HIS CG CD2 doub Y N 187 HIS ND1 CE1 doub Y N 188 HIS ND1 HD1 sing N N 189 HIS CD2 NE2 sing Y N 190 HIS CD2 HD2 sing N N 191 HIS CE1 NE2 sing Y N 192 HIS CE1 HE1 sing N N 193 HIS NE2 HE2 sing N N 194 HIS OXT HXT sing N N 195 HOH O H1 sing N N 196 HOH O H2 sing N N 197 ILE N CA sing N N 198 ILE N H sing N N 199 ILE N H2 sing N N 200 ILE CA C sing N N 201 ILE CA CB sing N N 202 ILE CA HA sing N N 203 ILE C O doub N N 204 ILE C OXT sing N N 205 ILE CB CG1 sing N N 206 ILE CB CG2 sing N N 207 ILE CB HB sing N N 208 ILE CG1 CD1 sing N N 209 ILE CG1 HG12 sing N N 210 ILE CG1 HG13 sing N N 211 ILE CG2 HG21 sing N N 212 ILE CG2 HG22 sing N N 213 ILE CG2 HG23 sing N N 214 ILE CD1 HD11 sing N N 215 ILE CD1 HD12 sing N N 216 ILE CD1 HD13 sing N N 217 ILE OXT HXT sing N N 218 LEU N CA sing N N 219 LEU N H sing N N 220 LEU N H2 sing N N 221 LEU CA C sing N N 222 LEU CA CB sing N N 223 LEU CA HA sing N N 224 LEU C O doub N N 225 LEU C OXT sing N N 226 LEU CB CG sing N N 227 LEU CB HB2 sing N N 228 LEU CB HB3 sing N N 229 LEU CG CD1 sing N N 230 LEU CG CD2 sing N N 231 LEU CG HG sing N N 232 LEU CD1 HD11 sing N N 233 LEU CD1 HD12 sing N N 234 LEU CD1 HD13 sing N N 235 LEU CD2 HD21 sing N N 236 LEU CD2 HD22 sing N N 237 LEU CD2 HD23 sing N N 238 LEU OXT HXT sing N N 239 LYS N CA sing N N 240 LYS N H sing N N 241 LYS N H2 sing N N 242 LYS CA C sing N N 243 LYS CA CB sing N N 244 LYS CA HA sing N N 245 LYS C O doub N N 246 LYS C OXT sing N N 247 LYS CB CG sing N N 248 LYS CB HB2 sing N N 249 LYS CB HB3 sing N N 250 LYS CG CD sing N N 251 LYS CG HG2 sing N N 252 LYS CG HG3 sing N N 253 LYS CD CE sing N N 254 LYS CD HD2 sing N N 255 LYS CD HD3 sing N N 256 LYS CE NZ sing N N 257 LYS CE HE2 sing N N 258 LYS CE HE3 sing N N 259 LYS NZ HZ1 sing N N 260 LYS NZ HZ2 sing N N 261 LYS NZ HZ3 sing N N 262 LYS OXT HXT sing N N 263 MET N CA sing N N 264 MET N H sing N N 265 MET N H2 sing N N 266 MET CA C sing N N 267 MET CA CB sing N N 268 MET CA HA sing N N 269 MET C O doub N N 270 MET C OXT sing N N 271 MET CB CG sing N N 272 MET CB HB2 sing N N 273 MET CB HB3 sing N N 274 MET CG SD sing N N 275 MET CG HG2 sing N N 276 MET CG HG3 sing N N 277 MET SD CE sing N N 278 MET CE HE1 sing N N 279 MET CE HE2 sing N N 280 MET CE HE3 sing N N 281 MET OXT HXT sing N N 282 PHE N CA sing N N 283 PHE N H sing N N 284 PHE N H2 sing N N 285 PHE CA C sing N N 286 PHE CA CB sing N N 287 PHE CA HA sing N N 288 PHE C O doub N N 289 PHE C OXT sing N N 290 PHE CB CG sing N N 291 PHE CB HB2 sing N N 292 PHE CB HB3 sing N N 293 PHE CG CD1 doub Y N 294 PHE CG CD2 sing Y N 295 PHE CD1 CE1 sing Y N 296 PHE CD1 HD1 sing N N 297 PHE CD2 CE2 doub Y N 298 PHE CD2 HD2 sing N N 299 PHE CE1 CZ doub Y N 300 PHE CE1 HE1 sing N N 301 PHE CE2 CZ sing Y N 302 PHE CE2 HE2 sing N N 303 PHE CZ HZ sing N N 304 PHE OXT HXT sing N N 305 PRO N CA sing N N 306 PRO N CD sing N N 307 PRO N H sing N N 308 PRO CA C sing N N 309 PRO CA CB sing N N 310 PRO CA HA sing N N 311 PRO C O doub N N 312 PRO C OXT sing N N 313 PRO CB CG sing N N 314 PRO CB HB2 sing N N 315 PRO CB HB3 sing N N 316 PRO CG CD sing N N 317 PRO CG HG2 sing N N 318 PRO CG HG3 sing N N 319 PRO CD HD2 sing N N 320 PRO CD HD3 sing N N 321 PRO OXT HXT sing N N 322 SER N CA sing N N 323 SER N H sing N N 324 SER N H2 sing N N 325 SER CA C sing N N 326 SER CA CB sing N N 327 SER CA HA sing N N 328 SER C O doub N N 329 SER C OXT sing N N 330 SER CB OG sing N N 331 SER CB HB2 sing N N 332 SER CB HB3 sing N N 333 SER OG HG sing N N 334 SER OXT HXT sing N N 335 SO4 S O1 doub N N 336 SO4 S O2 doub N N 337 SO4 S O3 sing N N 338 SO4 S O4 sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TYR N CA sing N N 356 TYR N H sing N N 357 TYR N H2 sing N N 358 TYR CA C sing N N 359 TYR CA CB sing N N 360 TYR CA HA sing N N 361 TYR C O doub N N 362 TYR C OXT sing N N 363 TYR CB CG sing N N 364 TYR CB HB2 sing N N 365 TYR CB HB3 sing N N 366 TYR CG CD1 doub Y N 367 TYR CG CD2 sing Y N 368 TYR CD1 CE1 sing Y N 369 TYR CD1 HD1 sing N N 370 TYR CD2 CE2 doub Y N 371 TYR CD2 HD2 sing N N 372 TYR CE1 CZ doub Y N 373 TYR CE1 HE1 sing N N 374 TYR CE2 CZ sing Y N 375 TYR CE2 HE2 sing N N 376 TYR CZ OH sing N N 377 TYR OH HH sing N N 378 TYR OXT HXT sing N N 379 VAL N CA sing N N 380 VAL N H sing N N 381 VAL N H2 sing N N 382 VAL CA C sing N N 383 VAL CA CB sing N N 384 VAL CA HA sing N N 385 VAL C O doub N N 386 VAL C OXT sing N N 387 VAL CB CG1 sing N N 388 VAL CB CG2 sing N N 389 VAL CB HB sing N N 390 VAL CG1 HG11 sing N N 391 VAL CG1 HG12 sing N N 392 VAL CG1 HG13 sing N N 393 VAL CG2 HG21 sing N N 394 VAL CG2 HG22 sing N N 395 VAL CG2 HG23 sing N N 396 VAL OXT HXT sing N N 397 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER' AP2 3 'MAGNESIUM ION' MG 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DV2 _pdbx_initial_refinement_model.details 'PDB ENTRY 1DV2' #