data_2YK4 # _entry.id 2YK4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YK4 pdb_00002yk4 10.2210/pdb2yk4/pdb PDBE EBI-48411 ? ? WWPDB D_1290048411 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2YK5 unspecified 'STRUCTURE OF NEISSERIA LOS-SPECIFIC SIALYLTRANSFERASE (NST), IN COMPLEX WITH CMP.' PDB 2YK7 unspecified 'STRUCTURE OF NEISSERIA LOS-SPECIFIC SIALYLTRANSFERASE (NST), IN COMPLEX WITH CMP-3F-NEU5AC.' PDB 2YK6 unspecified 'STRUCTURE OF NEISSERIA LOS-SPECIFIC SIALYLTRANSFERASE (NST), IN COMPLEX WITH CDP.' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YK4 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-05-25 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lin, L.Y.C.' 1 'Rakic, B.' 2 'Chiu, C.P.C.' 3 'Lameignere, E.' 4 'Wakarchuk, W.W.' 5 'Withers, S.G.' 6 'Strynadka, N.C.J.' 7 # _citation.id primary _citation.title 'Structure and Mechanism of the Lipooligosaccharide Sialyltransferase from Neisseria Meningitidis' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 37237 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21880735 _citation.pdbx_database_id_DOI 10.1074/JBC.M111.249920 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lin, L.Y.C.' 1 ? primary 'Rakic, B.' 2 ? primary 'Chiu, C.P.C.' 3 ? primary 'Lameignere, E.' 4 ? primary 'Wakarchuk, W.W.' 5 ? primary 'Withers, S.G.' 6 ? primary 'Strynadka, N.C.J.' 7 ? # _cell.entry_id 2YK4 _cell.length_a 86.565 _cell.length_b 124.735 _cell.length_c 41.866 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YK4 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE-ALPHA-2,3-SIALYLTRANSFERASE 38210.152 1 2.4.99.- ? 'DELTA29NST, RESIDUES 49-370' ? 2 non-polymer syn ;2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL ; 602.797 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 253 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;ALPHA 2\,3-ST, BETA-GALACTOSIDE ALPHA-2\,3-SIALYL TRANSFERASE, LIPOOLIGOSACCHARIDE SIALYLTRANSFERASE, LOS-SPECIFIC SIALYLTRANSFERASE ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;EPVNLIFCYTILQ(MSE)KVAERI(MSE)AQHPGERFYVVL(MSE)SENRNEKYDYYFNQIKDKAEWAYFFHLPYGLNKS FNFIPT(MSE)AELKVKA(MSE)LLPKVKRIYLASLEKVSIAAFLSTYPDAEIKTFDDGTINLIQSSSYLGDEFSVNGTI KRNFAR(MSE)(MSE)IGDWSIAKTRNASDEHYTIFKGLKNI(MSE)DDGRRK(MSE)TYLPLFDASELKAGDETGGTVR ILLGSPDKE(MSE)KEISEKAAKNFNIQYVAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALT (MSE)KDFPNVHVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKLVPR ; _entity_poly.pdbx_seq_one_letter_code_can ;EPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAEWAYFFHLPYGLNKSFNFIPTMAELKV KAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEIKTFDDGTINLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNA SDEHYTIFKGLKNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQYVAPHPRQTYGL SGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNVHVYALKPASLPEDYWLKPVYALFTQSGIPILTF DDKLVPR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PRO n 1 3 VAL n 1 4 ASN n 1 5 LEU n 1 6 ILE n 1 7 PHE n 1 8 CYS n 1 9 TYR n 1 10 THR n 1 11 ILE n 1 12 LEU n 1 13 GLN n 1 14 MSE n 1 15 LYS n 1 16 VAL n 1 17 ALA n 1 18 GLU n 1 19 ARG n 1 20 ILE n 1 21 MSE n 1 22 ALA n 1 23 GLN n 1 24 HIS n 1 25 PRO n 1 26 GLY n 1 27 GLU n 1 28 ARG n 1 29 PHE n 1 30 TYR n 1 31 VAL n 1 32 VAL n 1 33 LEU n 1 34 MSE n 1 35 SER n 1 36 GLU n 1 37 ASN n 1 38 ARG n 1 39 ASN n 1 40 GLU n 1 41 LYS n 1 42 TYR n 1 43 ASP n 1 44 TYR n 1 45 TYR n 1 46 PHE n 1 47 ASN n 1 48 GLN n 1 49 ILE n 1 50 LYS n 1 51 ASP n 1 52 LYS n 1 53 ALA n 1 54 GLU n 1 55 TRP n 1 56 ALA n 1 57 TYR n 1 58 PHE n 1 59 PHE n 1 60 HIS n 1 61 LEU n 1 62 PRO n 1 63 TYR n 1 64 GLY n 1 65 LEU n 1 66 ASN n 1 67 LYS n 1 68 SER n 1 69 PHE n 1 70 ASN n 1 71 PHE n 1 72 ILE n 1 73 PRO n 1 74 THR n 1 75 MSE n 1 76 ALA n 1 77 GLU n 1 78 LEU n 1 79 LYS n 1 80 VAL n 1 81 LYS n 1 82 ALA n 1 83 MSE n 1 84 LEU n 1 85 LEU n 1 86 PRO n 1 87 LYS n 1 88 VAL n 1 89 LYS n 1 90 ARG n 1 91 ILE n 1 92 TYR n 1 93 LEU n 1 94 ALA n 1 95 SER n 1 96 LEU n 1 97 GLU n 1 98 LYS n 1 99 VAL n 1 100 SER n 1 101 ILE n 1 102 ALA n 1 103 ALA n 1 104 PHE n 1 105 LEU n 1 106 SER n 1 107 THR n 1 108 TYR n 1 109 PRO n 1 110 ASP n 1 111 ALA n 1 112 GLU n 1 113 ILE n 1 114 LYS n 1 115 THR n 1 116 PHE n 1 117 ASP n 1 118 ASP n 1 119 GLY n 1 120 THR n 1 121 ILE n 1 122 ASN n 1 123 LEU n 1 124 ILE n 1 125 GLN n 1 126 SER n 1 127 SER n 1 128 SER n 1 129 TYR n 1 130 LEU n 1 131 GLY n 1 132 ASP n 1 133 GLU n 1 134 PHE n 1 135 SER n 1 136 VAL n 1 137 ASN n 1 138 GLY n 1 139 THR n 1 140 ILE n 1 141 LYS n 1 142 ARG n 1 143 ASN n 1 144 PHE n 1 145 ALA n 1 146 ARG n 1 147 MSE n 1 148 MSE n 1 149 ILE n 1 150 GLY n 1 151 ASP n 1 152 TRP n 1 153 SER n 1 154 ILE n 1 155 ALA n 1 156 LYS n 1 157 THR n 1 158 ARG n 1 159 ASN n 1 160 ALA n 1 161 SER n 1 162 ASP n 1 163 GLU n 1 164 HIS n 1 165 TYR n 1 166 THR n 1 167 ILE n 1 168 PHE n 1 169 LYS n 1 170 GLY n 1 171 LEU n 1 172 LYS n 1 173 ASN n 1 174 ILE n 1 175 MSE n 1 176 ASP n 1 177 ASP n 1 178 GLY n 1 179 ARG n 1 180 ARG n 1 181 LYS n 1 182 MSE n 1 183 THR n 1 184 TYR n 1 185 LEU n 1 186 PRO n 1 187 LEU n 1 188 PHE n 1 189 ASP n 1 190 ALA n 1 191 SER n 1 192 GLU n 1 193 LEU n 1 194 LYS n 1 195 ALA n 1 196 GLY n 1 197 ASP n 1 198 GLU n 1 199 THR n 1 200 GLY n 1 201 GLY n 1 202 THR n 1 203 VAL n 1 204 ARG n 1 205 ILE n 1 206 LEU n 1 207 LEU n 1 208 GLY n 1 209 SER n 1 210 PRO n 1 211 ASP n 1 212 LYS n 1 213 GLU n 1 214 MSE n 1 215 LYS n 1 216 GLU n 1 217 ILE n 1 218 SER n 1 219 GLU n 1 220 LYS n 1 221 ALA n 1 222 ALA n 1 223 LYS n 1 224 ASN n 1 225 PHE n 1 226 ASN n 1 227 ILE n 1 228 GLN n 1 229 TYR n 1 230 VAL n 1 231 ALA n 1 232 PRO n 1 233 HIS n 1 234 PRO n 1 235 ARG n 1 236 GLN n 1 237 THR n 1 238 TYR n 1 239 GLY n 1 240 LEU n 1 241 SER n 1 242 GLY n 1 243 VAL n 1 244 THR n 1 245 THR n 1 246 LEU n 1 247 ASN n 1 248 SER n 1 249 PRO n 1 250 TYR n 1 251 VAL n 1 252 ILE n 1 253 GLU n 1 254 ASP n 1 255 TYR n 1 256 ILE n 1 257 LEU n 1 258 ARG n 1 259 GLU n 1 260 ILE n 1 261 LYS n 1 262 LYS n 1 263 ASN n 1 264 PRO n 1 265 HIS n 1 266 THR n 1 267 ARG n 1 268 TYR n 1 269 GLU n 1 270 ILE n 1 271 TYR n 1 272 THR n 1 273 PHE n 1 274 PHE n 1 275 SER n 1 276 GLY n 1 277 ALA n 1 278 ALA n 1 279 LEU n 1 280 THR n 1 281 MSE n 1 282 LYS n 1 283 ASP n 1 284 PHE n 1 285 PRO n 1 286 ASN n 1 287 VAL n 1 288 HIS n 1 289 VAL n 1 290 TYR n 1 291 ALA n 1 292 LEU n 1 293 LYS n 1 294 PRO n 1 295 ALA n 1 296 SER n 1 297 LEU n 1 298 PRO n 1 299 GLU n 1 300 ASP n 1 301 TYR n 1 302 TRP n 1 303 LEU n 1 304 LYS n 1 305 PRO n 1 306 VAL n 1 307 TYR n 1 308 ALA n 1 309 LEU n 1 310 PHE n 1 311 THR n 1 312 GLN n 1 313 SER n 1 314 GLY n 1 315 ILE n 1 316 PRO n 1 317 ILE n 1 318 LEU n 1 319 THR n 1 320 PHE n 1 321 ASP n 1 322 ASP n 1 323 LYS n 1 324 LEU n 1 325 VAL n 1 326 PRO n 1 327 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain '126E / NRCC4010' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'NEISSERIA MENINGITIDIS SEROGROUP B' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 491 _entity_src_gen.pdbx_gene_src_variant 'L1 IMMUNOTYPE' _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-41B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LST_NEIMB _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P72097 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YK4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 323 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P72097 _struct_ref_seq.db_align_beg 49 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 370 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 49 _struct_ref_seq.pdbx_auth_seq_align_end 370 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YK4 GLU A 1 ? UNP P72097 ? ? 'expression tag' 48 1 1 2YK4 LEU A 324 ? UNP P72097 ? ? 'expression tag' 371 2 1 2YK4 VAL A 325 ? UNP P72097 ? ? 'expression tag' 372 3 1 2YK4 PRO A 326 ? UNP P72097 ? ? 'expression tag' 373 4 1 2YK4 ARG A 327 ? UNP P72097 ? ? 'expression tag' 374 5 1 2YK4 TRP A 55 ? UNP P72097 ARG 102 variant 102 6 1 2YK4 ALA A 82 ? UNP P72097 SER 129 variant 129 7 1 2YK4 ILE A 121 ? UNP P72097 GLY 168 variant 168 8 1 2YK4 ALA A 195 ? UNP P72097 THR 242 variant 242 9 1 2YK4 ASN A 226 ? UNP P72097 LYS 273 variant 273 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 EGC non-polymer . ;2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL ; 'TRITON X-100' 'C32 H58 O10' 602.797 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YK4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.97 _exptl_crystal.density_percent_sol 58.65 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN WAS CRYSTALLIZED BY VAPOR DIFFUSION METHODS USING DROPS OF PROTEIN MIXED WITH AN EQUAL VOLUME OF PRECIPITANT: 100 MM SODIUM ACETATE (PH 4.2 - 4.4) 1.7 M DI-AMMONIUM SULFATE. ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL, SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength 0.980 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YK4 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 71.07 _reflns.d_resolution_high 1.94 _reflns.number_obs 34365 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.01 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 35.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.94 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.05 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.22 _reflns_shell.pdbx_redundancy 8.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YK4 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 32604 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 71.07 _refine.ls_d_res_high 1.94 _refine.ls_percent_reflns_obs 99.92 _refine.ls_R_factor_obs 0.19639 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19499 _refine.ls_R_factor_R_free 0.22274 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1735 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 32.485 _refine.aniso_B[1][1] -1.39 _refine.aniso_B[2][2] 0.23 _refine.aniso_B[3][3] 1.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2YK5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.145 _refine.pdbx_overall_ESU_R_Free 0.132 _refine.overall_SU_ML 0.090 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.108 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2642 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.number_atoms_solvent 253 _refine_hist.number_atoms_total 2954 _refine_hist.d_res_high 1.94 _refine_hist.d_res_low 71.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 2766 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.619 1.991 ? 3732 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.560 5.000 ? 325 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.987 23.852 ? 122 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.014 15.000 ? 476 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.939 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.106 0.200 ? 400 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2052 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.036 1.500 ? 1631 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.820 2.000 ? 2646 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.576 3.000 ? 1135 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.953 4.500 ? 1086 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.942 _refine_ls_shell.d_res_low 1.992 _refine_ls_shell.number_reflns_R_work 2399 _refine_ls_shell.R_factor_R_work 0.246 _refine_ls_shell.percent_reflns_obs 99.13 _refine_ls_shell.R_factor_R_free 0.293 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 115 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2YK4 _struct.title 'Structure of Neisseria LOS-specific sialyltransferase (NST).' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YK4 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 10 ? HIS A 24 ? THR A 57 HIS A 71 1 ? 15 HELX_P HELX_P2 2 ASN A 39 ? ALA A 53 ? ASN A 86 ALA A 100 1 ? 15 HELX_P HELX_P3 3 THR A 74 ? LEU A 85 ? THR A 121 LEU A 132 1 ? 12 HELX_P HELX_P4 4 LEU A 96 ? ILE A 101 ? LEU A 143 ILE A 148 1 ? 6 HELX_P HELX_P5 5 ILE A 101 ? THR A 107 ? ILE A 148 THR A 154 1 ? 7 HELX_P HELX_P6 6 GLY A 119 ? ILE A 124 ? GLY A 166 ILE A 171 5 ? 6 HELX_P HELX_P7 7 GLN A 125 ? GLY A 131 ? GLN A 172 GLY A 178 5 ? 7 HELX_P HELX_P8 8 GLY A 131 ? SER A 135 ? GLY A 178 SER A 182 5 ? 5 HELX_P HELX_P9 9 THR A 139 ? ARG A 158 ? THR A 186 ARG A 205 1 ? 20 HELX_P HELX_P10 10 ASP A 211 ? GLU A 213 ? ASP A 258 GLU A 260 5 ? 3 HELX_P HELX_P11 11 MSE A 214 ? ASN A 226 ? MSE A 261 ASN A 273 1 ? 13 HELX_P HELX_P12 12 VAL A 251 ? ASN A 263 ? VAL A 298 ASN A 310 1 ? 13 HELX_P HELX_P13 13 GLY A 276 ? LYS A 282 ? GLY A 323 LYS A 329 1 ? 7 HELX_P HELX_P14 14 PRO A 298 ? TRP A 302 ? PRO A 345 TRP A 349 5 ? 5 HELX_P HELX_P15 15 LEU A 303 ? SER A 313 ? LEU A 350 SER A 360 1 ? 11 HELX_P HELX_P16 16 ASP A 321 ? VAL A 325 ? ASP A 368 VAL A 372 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLN 13 C ? ? ? 1_555 A MSE 14 N ? ? A GLN 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 14 C ? ? ? 1_555 A LYS 15 N ? ? A MSE 61 A LYS 62 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A ILE 20 C ? ? ? 1_555 A MSE 21 N ? ? A ILE 67 A MSE 68 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale4 covale both ? A MSE 21 C ? ? ? 1_555 A ALA 22 N ? ? A MSE 68 A ALA 69 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A LEU 33 C ? ? ? 1_555 A MSE 34 N ? ? A LEU 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale6 covale both ? A MSE 34 C ? ? ? 1_555 A SER 35 N ? ? A MSE 81 A SER 82 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A THR 74 C ? ? ? 1_555 A MSE 75 N ? ? A THR 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? A MSE 75 C ? ? ? 1_555 A ALA 76 N ? ? A MSE 122 A ALA 123 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A ALA 82 C ? ? ? 1_555 A MSE 83 N ? ? A ALA 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale10 covale both ? A MSE 83 C ? ? ? 1_555 A LEU 84 N ? ? A MSE 130 A LEU 131 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale11 covale both ? A ARG 146 C ? ? ? 1_555 A MSE 147 N ? ? A ARG 193 A MSE 194 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale12 covale both ? A MSE 147 C ? ? ? 1_555 A MSE 148 N ? ? A MSE 194 A MSE 195 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale13 covale both ? A MSE 148 C ? ? ? 1_555 A ILE 149 N ? ? A MSE 195 A ILE 196 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale14 covale both ? A ILE 174 C ? ? ? 1_555 A MSE 175 N ? ? A ILE 221 A MSE 222 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale15 covale both ? A MSE 175 C ? ? ? 1_555 A ASP 176 N ? ? A MSE 222 A ASP 223 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale16 covale both ? A LYS 181 C ? ? ? 1_555 A MSE 182 N ? ? A LYS 228 A MSE 229 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale17 covale both ? A MSE 182 C ? ? ? 1_555 A THR 183 N ? ? A MSE 229 A THR 230 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale18 covale both ? A GLU 213 C ? ? ? 1_555 A MSE 214 N ? ? A GLU 260 A MSE 261 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale19 covale both ? A MSE 214 C ? ? ? 1_555 A LYS 215 N ? ? A MSE 261 A LYS 262 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale20 covale both ? A THR 280 C ? ? ? 1_555 A MSE 281 N ? ? A THR 327 A MSE 328 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale21 covale both ? A MSE 281 C ? ? ? 1_555 A LYS 282 N ? ? A MSE 328 A LYS 329 1_555 ? ? ? ? ? ? ? 1.337 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? AB ? 4 ? AC ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AB 1 2 ? parallel AB 2 3 ? parallel AB 3 4 ? parallel AC 1 2 ? parallel AC 2 3 ? parallel AC 3 4 ? parallel AC 4 5 ? parallel AC 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 3 ? CYS A 8 ? VAL A 50 CYS A 55 AA 2 ARG A 28 ? SER A 35 ? ARG A 75 SER A 82 AA 3 TRP A 55 ? HIS A 60 ? TRP A 102 HIS A 107 AB 1 ARG A 90 ? ALA A 94 ? ARG A 137 ALA A 141 AB 2 GLU A 112 ? PHE A 116 ? GLU A 159 PHE A 163 AB 3 GLU A 163 ? THR A 166 ? GLU A 210 THR A 213 AB 4 LYS A 181 ? TYR A 184 ? LYS A 228 TYR A 231 AC 1 THR A 244 ? THR A 245 ? THR A 291 THR A 292 AC 2 TYR A 229 ? ALA A 231 ? TYR A 276 ALA A 278 AC 3 THR A 202 ? LEU A 207 ? THR A 249 LEU A 254 AC 4 ARG A 267 ? THR A 272 ? ARG A 314 THR A 319 AC 5 VAL A 287 ? PRO A 294 ? VAL A 334 PRO A 341 AC 6 ILE A 317 ? PHE A 320 ? ILE A 364 PHE A 367 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ASN A 4 ? N ASN A 51 O ARG A 28 ? O ARG A 75 AA 2 3 N VAL A 31 ? N VAL A 78 O TRP A 55 ? O TRP A 102 AB 1 2 N ILE A 91 ? N ILE A 138 O GLU A 112 ? O GLU A 159 AB 2 3 N THR A 115 ? N THR A 162 O GLU A 163 ? O GLU A 210 AB 3 4 N HIS A 164 ? N HIS A 211 O LYS A 181 ? O LYS A 228 AC 1 2 O THR A 244 ? O THR A 291 N VAL A 230 ? N VAL A 277 AC 2 3 N TYR A 229 ? N TYR A 276 O ARG A 204 ? O ARG A 251 AC 3 4 N VAL A 203 ? N VAL A 250 O ARG A 267 ? O ARG A 314 AC 4 5 N ILE A 270 ? N ILE A 317 O HIS A 288 ? O HIS A 335 AC 5 6 N LYS A 293 ? N LYS A 340 O LEU A 318 ? O LEU A 365 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EGC 1374 ? 18 'BINDING SITE FOR RESIDUE EGC A 1374' AC2 Software A EDO 1375 ? 7 'BINDING SITE FOR RESIDUE EDO A 1375' AC3 Software A EDO 1376 ? 5 'BINDING SITE FOR RESIDUE EDO A 1376' AC4 Software A EDO 1377 ? 8 'BINDING SITE FOR RESIDUE EDO A 1377' AC5 Software A SO4 1378 ? 5 'BINDING SITE FOR RESIDUE SO4 A 1378' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 PHE A 7 ? PHE A 54 . ? 2_665 ? 2 AC1 18 TYR A 9 ? TYR A 56 . ? 1_555 ? 3 AC1 18 VAL A 32 ? VAL A 79 . ? 2_665 ? 4 AC1 18 TRP A 55 ? TRP A 102 . ? 2_665 ? 5 AC1 18 PHE A 59 ? PHE A 106 . ? 2_665 ? 6 AC1 18 TYR A 63 ? TYR A 110 . ? 1_555 ? 7 AC1 18 LEU A 65 ? LEU A 112 . ? 1_555 ? 8 AC1 18 ASN A 66 ? ASN A 113 . ? 1_555 ? 9 AC1 18 SER A 68 ? SER A 115 . ? 1_555 ? 10 AC1 18 LEU A 96 ? LEU A 143 . ? 2_665 ? 11 AC1 18 VAL A 99 ? VAL A 146 . ? 2_665 ? 12 AC1 18 SER A 100 ? SER A 147 . ? 2_665 ? 13 AC1 18 ILE A 101 ? ILE A 148 . ? 1_555 ? 14 AC1 18 ALA A 103 ? ALA A 150 . ? 1_555 ? 15 AC1 18 PHE A 104 ? PHE A 151 . ? 1_555 ? 16 AC1 18 HOH G . ? HOH A 2062 . ? 1_555 ? 17 AC1 18 HOH G . ? HOH A 2092 . ? 1_555 ? 18 AC1 18 HOH G . ? HOH A 2252 . ? 1_555 ? 19 AC2 7 LEU A 12 ? LEU A 59 . ? 2_665 ? 20 AC2 7 VAL A 16 ? VAL A 63 . ? 2_665 ? 21 AC2 7 ASP A 117 ? ASP A 164 . ? 1_555 ? 22 AC2 7 GLY A 119 ? GLY A 166 . ? 1_555 ? 23 AC2 7 ILE A 167 ? ILE A 214 . ? 1_555 ? 24 AC2 7 HOH G . ? HOH A 2106 . ? 1_555 ? 25 AC2 7 HOH G . ? HOH A 2107 . ? 1_555 ? 26 AC3 5 SER A 275 ? SER A 322 . ? 1_555 ? 27 AC3 5 GLY A 276 ? GLY A 323 . ? 1_555 ? 28 AC3 5 HOH G . ? HOH A 2072 . ? 2_665 ? 29 AC3 5 HOH G . ? HOH A 2108 . ? 1_555 ? 30 AC3 5 HOH G . ? HOH A 2221 . ? 1_555 ? 31 AC4 8 ALA A 22 ? ALA A 69 . ? 1_555 ? 32 AC4 8 GLN A 23 ? GLN A 70 . ? 1_555 ? 33 AC4 8 ASN A 224 ? ASN A 271 . ? 3_655 ? 34 AC4 8 THR A 319 ? THR A 366 . ? 3_655 ? 35 AC4 8 PHE A 320 ? PHE A 367 . ? 3_655 ? 36 AC4 8 ASP A 321 ? ASP A 368 . ? 3_655 ? 37 AC4 8 HOH G . ? HOH A 2009 . ? 1_555 ? 38 AC4 8 HOH G . ? HOH A 2253 . ? 1_555 ? 39 AC5 5 HIS A 24 ? HIS A 71 . ? 1_555 ? 40 AC5 5 GLU A 27 ? GLU A 74 . ? 1_555 ? 41 AC5 5 ARG A 90 ? ARG A 137 . ? 2_665 ? 42 AC5 5 ARG A 204 ? ARG A 251 . ? 3_655 ? 43 AC5 5 ASN A 226 ? ASN A 273 . ? 3_655 ? # _database_PDB_matrix.entry_id 2YK4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YK4 _atom_sites.fract_transf_matrix[1][1] 0.011552 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008017 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023886 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 48 48 GLU GLU A . n A 1 2 PRO 2 49 49 PRO PRO A . n A 1 3 VAL 3 50 50 VAL VAL A . n A 1 4 ASN 4 51 51 ASN ASN A . n A 1 5 LEU 5 52 52 LEU LEU A . n A 1 6 ILE 6 53 53 ILE ILE A . n A 1 7 PHE 7 54 54 PHE PHE A . n A 1 8 CYS 8 55 55 CYS CYS A . n A 1 9 TYR 9 56 56 TYR TYR A . n A 1 10 THR 10 57 57 THR THR A . n A 1 11 ILE 11 58 58 ILE ILE A . n A 1 12 LEU 12 59 59 LEU LEU A . n A 1 13 GLN 13 60 60 GLN GLN A . n A 1 14 MSE 14 61 61 MSE MSE A . n A 1 15 LYS 15 62 62 LYS LYS A . n A 1 16 VAL 16 63 63 VAL VAL A . n A 1 17 ALA 17 64 64 ALA ALA A . n A 1 18 GLU 18 65 65 GLU GLU A . n A 1 19 ARG 19 66 66 ARG ARG A . n A 1 20 ILE 20 67 67 ILE ILE A . n A 1 21 MSE 21 68 68 MSE MSE A . n A 1 22 ALA 22 69 69 ALA ALA A . n A 1 23 GLN 23 70 70 GLN GLN A . n A 1 24 HIS 24 71 71 HIS HIS A . n A 1 25 PRO 25 72 72 PRO PRO A . n A 1 26 GLY 26 73 73 GLY GLY A . n A 1 27 GLU 27 74 74 GLU GLU A . n A 1 28 ARG 28 75 75 ARG ARG A . n A 1 29 PHE 29 76 76 PHE PHE A . n A 1 30 TYR 30 77 77 TYR TYR A . n A 1 31 VAL 31 78 78 VAL VAL A . n A 1 32 VAL 32 79 79 VAL VAL A . n A 1 33 LEU 33 80 80 LEU LEU A . n A 1 34 MSE 34 81 81 MSE MSE A . n A 1 35 SER 35 82 82 SER SER A . n A 1 36 GLU 36 83 83 GLU GLU A . n A 1 37 ASN 37 84 84 ASN ASN A . n A 1 38 ARG 38 85 85 ARG ARG A . n A 1 39 ASN 39 86 86 ASN ASN A . n A 1 40 GLU 40 87 87 GLU GLU A . n A 1 41 LYS 41 88 88 LYS LYS A . n A 1 42 TYR 42 89 89 TYR TYR A . n A 1 43 ASP 43 90 90 ASP ASP A . n A 1 44 TYR 44 91 91 TYR TYR A . n A 1 45 TYR 45 92 92 TYR TYR A . n A 1 46 PHE 46 93 93 PHE PHE A . n A 1 47 ASN 47 94 94 ASN ASN A . n A 1 48 GLN 48 95 95 GLN GLN A . n A 1 49 ILE 49 96 96 ILE ILE A . n A 1 50 LYS 50 97 97 LYS LYS A . n A 1 51 ASP 51 98 98 ASP ASP A . n A 1 52 LYS 52 99 99 LYS LYS A . n A 1 53 ALA 53 100 100 ALA ALA A . n A 1 54 GLU 54 101 101 GLU GLU A . n A 1 55 TRP 55 102 102 TRP TRP A . n A 1 56 ALA 56 103 103 ALA ALA A . n A 1 57 TYR 57 104 104 TYR TYR A . n A 1 58 PHE 58 105 105 PHE PHE A . n A 1 59 PHE 59 106 106 PHE PHE A . n A 1 60 HIS 60 107 107 HIS HIS A . n A 1 61 LEU 61 108 108 LEU LEU A . n A 1 62 PRO 62 109 109 PRO PRO A . n A 1 63 TYR 63 110 110 TYR TYR A . n A 1 64 GLY 64 111 111 GLY GLY A . n A 1 65 LEU 65 112 112 LEU LEU A . n A 1 66 ASN 66 113 113 ASN ASN A . n A 1 67 LYS 67 114 114 LYS LYS A . n A 1 68 SER 68 115 115 SER SER A . n A 1 69 PHE 69 116 116 PHE PHE A . n A 1 70 ASN 70 117 117 ASN ASN A . n A 1 71 PHE 71 118 118 PHE PHE A . n A 1 72 ILE 72 119 119 ILE ILE A . n A 1 73 PRO 73 120 120 PRO PRO A . n A 1 74 THR 74 121 121 THR THR A . n A 1 75 MSE 75 122 122 MSE MSE A . n A 1 76 ALA 76 123 123 ALA ALA A . n A 1 77 GLU 77 124 124 GLU GLU A . n A 1 78 LEU 78 125 125 LEU LEU A . n A 1 79 LYS 79 126 126 LYS LYS A . n A 1 80 VAL 80 127 127 VAL VAL A . n A 1 81 LYS 81 128 128 LYS LYS A . n A 1 82 ALA 82 129 129 ALA ALA A . n A 1 83 MSE 83 130 130 MSE MSE A . n A 1 84 LEU 84 131 131 LEU LEU A . n A 1 85 LEU 85 132 132 LEU LEU A . n A 1 86 PRO 86 133 133 PRO PRO A . n A 1 87 LYS 87 134 134 LYS LYS A . n A 1 88 VAL 88 135 135 VAL VAL A . n A 1 89 LYS 89 136 136 LYS LYS A . n A 1 90 ARG 90 137 137 ARG ARG A . n A 1 91 ILE 91 138 138 ILE ILE A . n A 1 92 TYR 92 139 139 TYR TYR A . n A 1 93 LEU 93 140 140 LEU LEU A . n A 1 94 ALA 94 141 141 ALA ALA A . n A 1 95 SER 95 142 142 SER SER A . n A 1 96 LEU 96 143 143 LEU LEU A . n A 1 97 GLU 97 144 144 GLU GLU A . n A 1 98 LYS 98 145 145 LYS LYS A . n A 1 99 VAL 99 146 146 VAL VAL A . n A 1 100 SER 100 147 147 SER SER A . n A 1 101 ILE 101 148 148 ILE ILE A . n A 1 102 ALA 102 149 149 ALA ALA A . n A 1 103 ALA 103 150 150 ALA ALA A . n A 1 104 PHE 104 151 151 PHE PHE A . n A 1 105 LEU 105 152 152 LEU LEU A . n A 1 106 SER 106 153 153 SER SER A . n A 1 107 THR 107 154 154 THR THR A . n A 1 108 TYR 108 155 155 TYR TYR A . n A 1 109 PRO 109 156 156 PRO PRO A . n A 1 110 ASP 110 157 157 ASP ASP A . n A 1 111 ALA 111 158 158 ALA ALA A . n A 1 112 GLU 112 159 159 GLU GLU A . n A 1 113 ILE 113 160 160 ILE ILE A . n A 1 114 LYS 114 161 161 LYS LYS A . n A 1 115 THR 115 162 162 THR THR A . n A 1 116 PHE 116 163 163 PHE PHE A . n A 1 117 ASP 117 164 164 ASP ASP A . n A 1 118 ASP 118 165 165 ASP ASP A . n A 1 119 GLY 119 166 166 GLY GLY A . n A 1 120 THR 120 167 167 THR THR A . n A 1 121 ILE 121 168 168 ILE ILE A . n A 1 122 ASN 122 169 169 ASN ASN A . n A 1 123 LEU 123 170 170 LEU LEU A . n A 1 124 ILE 124 171 171 ILE ILE A . n A 1 125 GLN 125 172 172 GLN GLN A . n A 1 126 SER 126 173 173 SER SER A . n A 1 127 SER 127 174 174 SER SER A . n A 1 128 SER 128 175 175 SER SER A . n A 1 129 TYR 129 176 176 TYR TYR A . n A 1 130 LEU 130 177 177 LEU LEU A . n A 1 131 GLY 131 178 178 GLY GLY A . n A 1 132 ASP 132 179 179 ASP ASP A . n A 1 133 GLU 133 180 180 GLU GLU A . n A 1 134 PHE 134 181 181 PHE PHE A . n A 1 135 SER 135 182 182 SER SER A . n A 1 136 VAL 136 183 183 VAL VAL A . n A 1 137 ASN 137 184 184 ASN ASN A . n A 1 138 GLY 138 185 185 GLY GLY A . n A 1 139 THR 139 186 186 THR THR A . n A 1 140 ILE 140 187 187 ILE ILE A . n A 1 141 LYS 141 188 188 LYS LYS A . n A 1 142 ARG 142 189 189 ARG ARG A . n A 1 143 ASN 143 190 190 ASN ASN A . n A 1 144 PHE 144 191 191 PHE PHE A . n A 1 145 ALA 145 192 192 ALA ALA A . n A 1 146 ARG 146 193 193 ARG ARG A . n A 1 147 MSE 147 194 194 MSE MSE A . n A 1 148 MSE 148 195 195 MSE MSE A . n A 1 149 ILE 149 196 196 ILE ILE A . n A 1 150 GLY 150 197 197 GLY GLY A . n A 1 151 ASP 151 198 198 ASP ASP A . n A 1 152 TRP 152 199 199 TRP TRP A . n A 1 153 SER 153 200 200 SER SER A . n A 1 154 ILE 154 201 201 ILE ILE A . n A 1 155 ALA 155 202 202 ALA ALA A . n A 1 156 LYS 156 203 203 LYS LYS A . n A 1 157 THR 157 204 204 THR THR A . n A 1 158 ARG 158 205 205 ARG ARG A . n A 1 159 ASN 159 206 206 ASN ASN A . n A 1 160 ALA 160 207 207 ALA ALA A . n A 1 161 SER 161 208 208 SER SER A . n A 1 162 ASP 162 209 209 ASP ASP A . n A 1 163 GLU 163 210 210 GLU GLU A . n A 1 164 HIS 164 211 211 HIS HIS A . n A 1 165 TYR 165 212 212 TYR TYR A . n A 1 166 THR 166 213 213 THR THR A . n A 1 167 ILE 167 214 214 ILE ILE A . n A 1 168 PHE 168 215 215 PHE PHE A . n A 1 169 LYS 169 216 216 LYS LYS A . n A 1 170 GLY 170 217 217 GLY GLY A . n A 1 171 LEU 171 218 218 LEU LEU A . n A 1 172 LYS 172 219 219 LYS LYS A . n A 1 173 ASN 173 220 220 ASN ASN A . n A 1 174 ILE 174 221 221 ILE ILE A . n A 1 175 MSE 175 222 222 MSE MSE A . n A 1 176 ASP 176 223 223 ASP ASP A . n A 1 177 ASP 177 224 224 ASP ASP A . n A 1 178 GLY 178 225 225 GLY GLY A . n A 1 179 ARG 179 226 226 ARG ARG A . n A 1 180 ARG 180 227 227 ARG ARG A . n A 1 181 LYS 181 228 228 LYS LYS A . n A 1 182 MSE 182 229 229 MSE MSE A . n A 1 183 THR 183 230 230 THR THR A . n A 1 184 TYR 184 231 231 TYR TYR A . n A 1 185 LEU 185 232 232 LEU LEU A . n A 1 186 PRO 186 233 233 PRO PRO A . n A 1 187 LEU 187 234 234 LEU LEU A . n A 1 188 PHE 188 235 235 PHE PHE A . n A 1 189 ASP 189 236 236 ASP ASP A . n A 1 190 ALA 190 237 237 ALA ALA A . n A 1 191 SER 191 238 238 SER SER A . n A 1 192 GLU 192 239 239 GLU GLU A . n A 1 193 LEU 193 240 240 LEU LEU A . n A 1 194 LYS 194 241 241 LYS LYS A . n A 1 195 ALA 195 242 242 ALA ALA A . n A 1 196 GLY 196 243 243 GLY GLY A . n A 1 197 ASP 197 244 244 ASP ASP A . n A 1 198 GLU 198 245 245 GLU GLU A . n A 1 199 THR 199 246 246 THR THR A . n A 1 200 GLY 200 247 247 GLY GLY A . n A 1 201 GLY 201 248 248 GLY GLY A . n A 1 202 THR 202 249 249 THR THR A . n A 1 203 VAL 203 250 250 VAL VAL A . n A 1 204 ARG 204 251 251 ARG ARG A . n A 1 205 ILE 205 252 252 ILE ILE A . n A 1 206 LEU 206 253 253 LEU LEU A . n A 1 207 LEU 207 254 254 LEU LEU A . n A 1 208 GLY 208 255 255 GLY GLY A . n A 1 209 SER 209 256 256 SER SER A . n A 1 210 PRO 210 257 257 PRO PRO A . n A 1 211 ASP 211 258 258 ASP ASP A . n A 1 212 LYS 212 259 259 LYS LYS A . n A 1 213 GLU 213 260 260 GLU GLU A . n A 1 214 MSE 214 261 261 MSE MSE A . n A 1 215 LYS 215 262 262 LYS LYS A . n A 1 216 GLU 216 263 263 GLU GLU A . n A 1 217 ILE 217 264 264 ILE ILE A . n A 1 218 SER 218 265 265 SER SER A . n A 1 219 GLU 219 266 266 GLU GLU A . n A 1 220 LYS 220 267 267 LYS LYS A . n A 1 221 ALA 221 268 268 ALA ALA A . n A 1 222 ALA 222 269 269 ALA ALA A . n A 1 223 LYS 223 270 270 LYS LYS A . n A 1 224 ASN 224 271 271 ASN ASN A . n A 1 225 PHE 225 272 272 PHE PHE A . n A 1 226 ASN 226 273 273 ASN ASN A . n A 1 227 ILE 227 274 274 ILE ILE A . n A 1 228 GLN 228 275 275 GLN GLN A . n A 1 229 TYR 229 276 276 TYR TYR A . n A 1 230 VAL 230 277 277 VAL VAL A . n A 1 231 ALA 231 278 278 ALA ALA A . n A 1 232 PRO 232 279 279 PRO PRO A . n A 1 233 HIS 233 280 280 HIS HIS A . n A 1 234 PRO 234 281 281 PRO PRO A . n A 1 235 ARG 235 282 282 ARG ARG A . n A 1 236 GLN 236 283 283 GLN GLN A . n A 1 237 THR 237 284 284 THR THR A . n A 1 238 TYR 238 285 285 TYR TYR A . n A 1 239 GLY 239 286 286 GLY GLY A . n A 1 240 LEU 240 287 287 LEU LEU A . n A 1 241 SER 241 288 288 SER SER A . n A 1 242 GLY 242 289 289 GLY GLY A . n A 1 243 VAL 243 290 290 VAL VAL A . n A 1 244 THR 244 291 291 THR THR A . n A 1 245 THR 245 292 292 THR THR A . n A 1 246 LEU 246 293 293 LEU LEU A . n A 1 247 ASN 247 294 294 ASN ASN A . n A 1 248 SER 248 295 295 SER SER A . n A 1 249 PRO 249 296 296 PRO PRO A . n A 1 250 TYR 250 297 297 TYR TYR A . n A 1 251 VAL 251 298 298 VAL VAL A . n A 1 252 ILE 252 299 299 ILE ILE A . n A 1 253 GLU 253 300 300 GLU GLU A . n A 1 254 ASP 254 301 301 ASP ASP A . n A 1 255 TYR 255 302 302 TYR TYR A . n A 1 256 ILE 256 303 303 ILE ILE A . n A 1 257 LEU 257 304 304 LEU LEU A . n A 1 258 ARG 258 305 305 ARG ARG A . n A 1 259 GLU 259 306 306 GLU GLU A . n A 1 260 ILE 260 307 307 ILE ILE A . n A 1 261 LYS 261 308 308 LYS LYS A . n A 1 262 LYS 262 309 309 LYS LYS A . n A 1 263 ASN 263 310 310 ASN ASN A . n A 1 264 PRO 264 311 311 PRO PRO A . n A 1 265 HIS 265 312 312 HIS HIS A . n A 1 266 THR 266 313 313 THR THR A . n A 1 267 ARG 267 314 314 ARG ARG A . n A 1 268 TYR 268 315 315 TYR TYR A . n A 1 269 GLU 269 316 316 GLU GLU A . n A 1 270 ILE 270 317 317 ILE ILE A . n A 1 271 TYR 271 318 318 TYR TYR A . n A 1 272 THR 272 319 319 THR THR A . n A 1 273 PHE 273 320 320 PHE PHE A . n A 1 274 PHE 274 321 321 PHE PHE A . n A 1 275 SER 275 322 322 SER SER A . n A 1 276 GLY 276 323 323 GLY GLY A . n A 1 277 ALA 277 324 324 ALA ALA A . n A 1 278 ALA 278 325 325 ALA ALA A . n A 1 279 LEU 279 326 326 LEU LEU A . n A 1 280 THR 280 327 327 THR THR A . n A 1 281 MSE 281 328 328 MSE MSE A . n A 1 282 LYS 282 329 329 LYS LYS A . n A 1 283 ASP 283 330 330 ASP ASP A . n A 1 284 PHE 284 331 331 PHE PHE A . n A 1 285 PRO 285 332 332 PRO PRO A . n A 1 286 ASN 286 333 333 ASN ASN A . n A 1 287 VAL 287 334 334 VAL VAL A . n A 1 288 HIS 288 335 335 HIS HIS A . n A 1 289 VAL 289 336 336 VAL VAL A . n A 1 290 TYR 290 337 337 TYR TYR A . n A 1 291 ALA 291 338 338 ALA ALA A . n A 1 292 LEU 292 339 339 LEU LEU A . n A 1 293 LYS 293 340 340 LYS LYS A . n A 1 294 PRO 294 341 341 PRO PRO A . n A 1 295 ALA 295 342 342 ALA ALA A . n A 1 296 SER 296 343 343 SER SER A . n A 1 297 LEU 297 344 344 LEU LEU A . n A 1 298 PRO 298 345 345 PRO PRO A . n A 1 299 GLU 299 346 346 GLU GLU A . n A 1 300 ASP 300 347 347 ASP ASP A . n A 1 301 TYR 301 348 348 TYR TYR A . n A 1 302 TRP 302 349 349 TRP TRP A . n A 1 303 LEU 303 350 350 LEU LEU A . n A 1 304 LYS 304 351 351 LYS LYS A . n A 1 305 PRO 305 352 352 PRO PRO A . n A 1 306 VAL 306 353 353 VAL VAL A . n A 1 307 TYR 307 354 354 TYR TYR A . n A 1 308 ALA 308 355 355 ALA ALA A . n A 1 309 LEU 309 356 356 LEU LEU A . n A 1 310 PHE 310 357 357 PHE PHE A . n A 1 311 THR 311 358 358 THR THR A . n A 1 312 GLN 312 359 359 GLN GLN A . n A 1 313 SER 313 360 360 SER SER A . n A 1 314 GLY 314 361 361 GLY GLY A . n A 1 315 ILE 315 362 362 ILE ILE A . n A 1 316 PRO 316 363 363 PRO PRO A . n A 1 317 ILE 317 364 364 ILE ILE A . n A 1 318 LEU 318 365 365 LEU LEU A . n A 1 319 THR 319 366 366 THR THR A . n A 1 320 PHE 320 367 367 PHE PHE A . n A 1 321 ASP 321 368 368 ASP ASP A . n A 1 322 ASP 322 369 369 ASP ASP A . n A 1 323 LYS 323 370 370 LYS LYS A . n A 1 324 LEU 324 371 371 LEU LEU A . n A 1 325 VAL 325 372 372 VAL VAL A . n A 1 326 PRO 326 373 373 PRO PRO A . n A 1 327 ARG 327 374 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EGC 1 1374 1374 EGC EGC A . C 3 EDO 1 1375 1375 EDO EDO A . D 3 EDO 1 1376 1376 EDO EDO A . E 3 EDO 1 1377 1377 EDO EDO A . F 4 SO4 1 1378 1378 SO4 SO4 A . G 5 HOH 1 2001 2001 HOH HOH A . G 5 HOH 2 2002 2002 HOH HOH A . G 5 HOH 3 2003 2003 HOH HOH A . G 5 HOH 4 2004 2004 HOH HOH A . G 5 HOH 5 2005 2005 HOH HOH A . G 5 HOH 6 2006 2006 HOH HOH A . G 5 HOH 7 2007 2007 HOH HOH A . G 5 HOH 8 2008 2008 HOH HOH A . G 5 HOH 9 2009 2009 HOH HOH A . G 5 HOH 10 2010 2010 HOH HOH A . G 5 HOH 11 2011 2011 HOH HOH A . G 5 HOH 12 2012 2012 HOH HOH A . G 5 HOH 13 2013 2013 HOH HOH A . G 5 HOH 14 2014 2014 HOH HOH A . G 5 HOH 15 2015 2015 HOH HOH A . G 5 HOH 16 2016 2016 HOH HOH A . G 5 HOH 17 2017 2017 HOH HOH A . G 5 HOH 18 2018 2018 HOH HOH A . G 5 HOH 19 2019 2019 HOH HOH A . G 5 HOH 20 2020 2020 HOH HOH A . G 5 HOH 21 2021 2021 HOH HOH A . G 5 HOH 22 2022 2022 HOH HOH A . G 5 HOH 23 2023 2023 HOH HOH A . G 5 HOH 24 2024 2024 HOH HOH A . G 5 HOH 25 2025 2025 HOH HOH A . G 5 HOH 26 2026 2026 HOH HOH A . G 5 HOH 27 2027 2027 HOH HOH A . G 5 HOH 28 2028 2028 HOH HOH A . G 5 HOH 29 2029 2029 HOH HOH A . G 5 HOH 30 2030 2030 HOH HOH A . G 5 HOH 31 2031 2031 HOH HOH A . G 5 HOH 32 2032 2032 HOH HOH A . G 5 HOH 33 2033 2033 HOH HOH A . G 5 HOH 34 2034 2034 HOH HOH A . G 5 HOH 35 2035 2035 HOH HOH A . G 5 HOH 36 2036 2036 HOH HOH A . G 5 HOH 37 2037 2037 HOH HOH A . G 5 HOH 38 2038 2038 HOH HOH A . G 5 HOH 39 2039 2039 HOH HOH A . G 5 HOH 40 2040 2040 HOH HOH A . G 5 HOH 41 2041 2041 HOH HOH A . G 5 HOH 42 2042 2042 HOH HOH A . G 5 HOH 43 2043 2043 HOH HOH A . G 5 HOH 44 2044 2044 HOH HOH A . G 5 HOH 45 2045 2045 HOH HOH A . G 5 HOH 46 2046 2046 HOH HOH A . G 5 HOH 47 2047 2047 HOH HOH A . G 5 HOH 48 2048 2048 HOH HOH A . G 5 HOH 49 2049 2049 HOH HOH A . G 5 HOH 50 2050 2050 HOH HOH A . G 5 HOH 51 2051 2051 HOH HOH A . G 5 HOH 52 2052 2052 HOH HOH A . G 5 HOH 53 2053 2053 HOH HOH A . G 5 HOH 54 2054 2054 HOH HOH A . G 5 HOH 55 2055 2055 HOH HOH A . G 5 HOH 56 2056 2056 HOH HOH A . G 5 HOH 57 2057 2057 HOH HOH A . G 5 HOH 58 2058 2058 HOH HOH A . G 5 HOH 59 2059 2059 HOH HOH A . G 5 HOH 60 2060 2060 HOH HOH A . G 5 HOH 61 2061 2061 HOH HOH A . G 5 HOH 62 2062 2062 HOH HOH A . G 5 HOH 63 2063 2063 HOH HOH A . G 5 HOH 64 2064 2064 HOH HOH A . G 5 HOH 65 2065 2065 HOH HOH A . G 5 HOH 66 2066 2066 HOH HOH A . G 5 HOH 67 2067 2067 HOH HOH A . G 5 HOH 68 2068 2068 HOH HOH A . G 5 HOH 69 2069 2069 HOH HOH A . G 5 HOH 70 2070 2070 HOH HOH A . G 5 HOH 71 2071 2071 HOH HOH A . G 5 HOH 72 2072 2072 HOH HOH A . G 5 HOH 73 2073 2073 HOH HOH A . G 5 HOH 74 2074 2074 HOH HOH A . G 5 HOH 75 2075 2075 HOH HOH A . G 5 HOH 76 2076 2076 HOH HOH A . G 5 HOH 77 2077 2077 HOH HOH A . G 5 HOH 78 2078 2078 HOH HOH A . G 5 HOH 79 2079 2079 HOH HOH A . G 5 HOH 80 2080 2080 HOH HOH A . G 5 HOH 81 2081 2081 HOH HOH A . G 5 HOH 82 2082 2082 HOH HOH A . G 5 HOH 83 2083 2083 HOH HOH A . G 5 HOH 84 2084 2084 HOH HOH A . G 5 HOH 85 2085 2085 HOH HOH A . G 5 HOH 86 2086 2086 HOH HOH A . G 5 HOH 87 2087 2087 HOH HOH A . G 5 HOH 88 2088 2088 HOH HOH A . G 5 HOH 89 2089 2089 HOH HOH A . G 5 HOH 90 2090 2090 HOH HOH A . G 5 HOH 91 2091 2091 HOH HOH A . G 5 HOH 92 2092 2092 HOH HOH A . G 5 HOH 93 2093 2093 HOH HOH A . G 5 HOH 94 2094 2094 HOH HOH A . G 5 HOH 95 2095 2095 HOH HOH A . G 5 HOH 96 2096 2096 HOH HOH A . G 5 HOH 97 2097 2097 HOH HOH A . G 5 HOH 98 2098 2098 HOH HOH A . G 5 HOH 99 2099 2099 HOH HOH A . G 5 HOH 100 2100 2100 HOH HOH A . G 5 HOH 101 2101 2101 HOH HOH A . G 5 HOH 102 2102 2102 HOH HOH A . G 5 HOH 103 2103 2103 HOH HOH A . G 5 HOH 104 2104 2104 HOH HOH A . G 5 HOH 105 2105 2105 HOH HOH A . G 5 HOH 106 2106 2106 HOH HOH A . G 5 HOH 107 2107 2107 HOH HOH A . G 5 HOH 108 2108 2108 HOH HOH A . G 5 HOH 109 2109 2109 HOH HOH A . G 5 HOH 110 2110 2110 HOH HOH A . G 5 HOH 111 2111 2111 HOH HOH A . G 5 HOH 112 2112 2112 HOH HOH A . G 5 HOH 113 2113 2113 HOH HOH A . G 5 HOH 114 2114 2114 HOH HOH A . G 5 HOH 115 2115 2115 HOH HOH A . G 5 HOH 116 2116 2116 HOH HOH A . G 5 HOH 117 2117 2117 HOH HOH A . G 5 HOH 118 2118 2118 HOH HOH A . G 5 HOH 119 2119 2119 HOH HOH A . G 5 HOH 120 2120 2120 HOH HOH A . G 5 HOH 121 2121 2121 HOH HOH A . G 5 HOH 122 2122 2122 HOH HOH A . G 5 HOH 123 2123 2123 HOH HOH A . G 5 HOH 124 2124 2124 HOH HOH A . G 5 HOH 125 2125 2125 HOH HOH A . G 5 HOH 126 2126 2126 HOH HOH A . G 5 HOH 127 2127 2127 HOH HOH A . G 5 HOH 128 2128 2128 HOH HOH A . G 5 HOH 129 2129 2129 HOH HOH A . G 5 HOH 130 2130 2130 HOH HOH A . G 5 HOH 131 2131 2131 HOH HOH A . G 5 HOH 132 2132 2132 HOH HOH A . G 5 HOH 133 2133 2133 HOH HOH A . G 5 HOH 134 2134 2134 HOH HOH A . G 5 HOH 135 2135 2135 HOH HOH A . G 5 HOH 136 2136 2136 HOH HOH A . G 5 HOH 137 2137 2137 HOH HOH A . G 5 HOH 138 2138 2138 HOH HOH A . G 5 HOH 139 2139 2139 HOH HOH A . G 5 HOH 140 2140 2140 HOH HOH A . G 5 HOH 141 2141 2141 HOH HOH A . G 5 HOH 142 2142 2142 HOH HOH A . G 5 HOH 143 2143 2143 HOH HOH A . G 5 HOH 144 2144 2144 HOH HOH A . G 5 HOH 145 2145 2145 HOH HOH A . G 5 HOH 146 2146 2146 HOH HOH A . G 5 HOH 147 2147 2147 HOH HOH A . G 5 HOH 148 2148 2148 HOH HOH A . G 5 HOH 149 2149 2149 HOH HOH A . G 5 HOH 150 2150 2150 HOH HOH A . G 5 HOH 151 2151 2151 HOH HOH A . G 5 HOH 152 2152 2152 HOH HOH A . G 5 HOH 153 2153 2153 HOH HOH A . G 5 HOH 154 2154 2154 HOH HOH A . G 5 HOH 155 2155 2155 HOH HOH A . G 5 HOH 156 2156 2156 HOH HOH A . G 5 HOH 157 2157 2157 HOH HOH A . G 5 HOH 158 2158 2158 HOH HOH A . G 5 HOH 159 2159 2159 HOH HOH A . G 5 HOH 160 2160 2160 HOH HOH A . G 5 HOH 161 2161 2161 HOH HOH A . G 5 HOH 162 2162 2162 HOH HOH A . G 5 HOH 163 2163 2163 HOH HOH A . G 5 HOH 164 2164 2164 HOH HOH A . G 5 HOH 165 2165 2165 HOH HOH A . G 5 HOH 166 2166 2166 HOH HOH A . G 5 HOH 167 2167 2167 HOH HOH A . G 5 HOH 168 2168 2168 HOH HOH A . G 5 HOH 169 2169 2169 HOH HOH A . G 5 HOH 170 2170 2170 HOH HOH A . G 5 HOH 171 2171 2171 HOH HOH A . G 5 HOH 172 2172 2172 HOH HOH A . G 5 HOH 173 2173 2173 HOH HOH A . G 5 HOH 174 2174 2174 HOH HOH A . G 5 HOH 175 2175 2175 HOH HOH A . G 5 HOH 176 2176 2176 HOH HOH A . G 5 HOH 177 2177 2177 HOH HOH A . G 5 HOH 178 2178 2178 HOH HOH A . G 5 HOH 179 2179 2179 HOH HOH A . G 5 HOH 180 2180 2180 HOH HOH A . G 5 HOH 181 2181 2181 HOH HOH A . G 5 HOH 182 2182 2182 HOH HOH A . G 5 HOH 183 2183 2183 HOH HOH A . G 5 HOH 184 2184 2184 HOH HOH A . G 5 HOH 185 2185 2185 HOH HOH A . G 5 HOH 186 2186 2186 HOH HOH A . G 5 HOH 187 2187 2187 HOH HOH A . G 5 HOH 188 2188 2188 HOH HOH A . G 5 HOH 189 2189 2189 HOH HOH A . G 5 HOH 190 2190 2190 HOH HOH A . G 5 HOH 191 2191 2191 HOH HOH A . G 5 HOH 192 2192 2192 HOH HOH A . G 5 HOH 193 2193 2193 HOH HOH A . G 5 HOH 194 2194 2194 HOH HOH A . G 5 HOH 195 2195 2195 HOH HOH A . G 5 HOH 196 2196 2196 HOH HOH A . G 5 HOH 197 2197 2197 HOH HOH A . G 5 HOH 198 2198 2198 HOH HOH A . G 5 HOH 199 2199 2199 HOH HOH A . G 5 HOH 200 2200 2200 HOH HOH A . G 5 HOH 201 2201 2201 HOH HOH A . G 5 HOH 202 2202 2202 HOH HOH A . G 5 HOH 203 2203 2203 HOH HOH A . G 5 HOH 204 2204 2204 HOH HOH A . G 5 HOH 205 2205 2205 HOH HOH A . G 5 HOH 206 2206 2206 HOH HOH A . G 5 HOH 207 2207 2207 HOH HOH A . G 5 HOH 208 2208 2208 HOH HOH A . G 5 HOH 209 2209 2209 HOH HOH A . G 5 HOH 210 2210 2210 HOH HOH A . G 5 HOH 211 2211 2211 HOH HOH A . G 5 HOH 212 2212 2212 HOH HOH A . G 5 HOH 213 2213 2213 HOH HOH A . G 5 HOH 214 2214 2214 HOH HOH A . G 5 HOH 215 2215 2215 HOH HOH A . G 5 HOH 216 2216 2216 HOH HOH A . G 5 HOH 217 2217 2217 HOH HOH A . G 5 HOH 218 2218 2218 HOH HOH A . G 5 HOH 219 2219 2219 HOH HOH A . G 5 HOH 220 2220 2220 HOH HOH A . G 5 HOH 221 2221 2221 HOH HOH A . G 5 HOH 222 2222 2222 HOH HOH A . G 5 HOH 223 2223 2223 HOH HOH A . G 5 HOH 224 2224 2224 HOH HOH A . G 5 HOH 225 2225 2225 HOH HOH A . G 5 HOH 226 2226 2226 HOH HOH A . G 5 HOH 227 2227 2227 HOH HOH A . G 5 HOH 228 2228 2228 HOH HOH A . G 5 HOH 229 2229 2229 HOH HOH A . G 5 HOH 230 2230 2230 HOH HOH A . G 5 HOH 231 2231 2231 HOH HOH A . G 5 HOH 232 2232 2232 HOH HOH A . G 5 HOH 233 2233 2233 HOH HOH A . G 5 HOH 234 2234 2234 HOH HOH A . G 5 HOH 235 2235 2235 HOH HOH A . G 5 HOH 236 2236 2236 HOH HOH A . G 5 HOH 237 2237 2237 HOH HOH A . G 5 HOH 238 2238 2238 HOH HOH A . G 5 HOH 239 2239 2239 HOH HOH A . G 5 HOH 240 2240 2240 HOH HOH A . G 5 HOH 241 2241 2241 HOH HOH A . G 5 HOH 242 2242 2242 HOH HOH A . G 5 HOH 243 2243 2243 HOH HOH A . G 5 HOH 244 2244 2244 HOH HOH A . G 5 HOH 245 2245 2245 HOH HOH A . G 5 HOH 246 2246 2246 HOH HOH A . G 5 HOH 247 2247 2247 HOH HOH A . G 5 HOH 248 2248 2248 HOH HOH A . G 5 HOH 249 2249 2249 HOH HOH A . G 5 HOH 250 2250 2250 HOH HOH A . G 5 HOH 251 2251 2251 HOH HOH A . G 5 HOH 252 2252 2252 HOH HOH A . G 5 HOH 253 2253 2253 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 14 A MSE 61 ? MET SELENOMETHIONINE 2 A MSE 21 A MSE 68 ? MET SELENOMETHIONINE 3 A MSE 34 A MSE 81 ? MET SELENOMETHIONINE 4 A MSE 75 A MSE 122 ? MET SELENOMETHIONINE 5 A MSE 83 A MSE 130 ? MET SELENOMETHIONINE 6 A MSE 147 A MSE 194 ? MET SELENOMETHIONINE 7 A MSE 148 A MSE 195 ? MET SELENOMETHIONINE 8 A MSE 175 A MSE 222 ? MET SELENOMETHIONINE 9 A MSE 182 A MSE 229 ? MET SELENOMETHIONINE 10 A MSE 214 A MSE 261 ? MET SELENOMETHIONINE 11 A MSE 281 A MSE 328 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13490 ? 1 MORE -92.3 ? 1 'SSA (A^2)' 28190 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 86.5650000000 0.0000000000 -1.0000000000 0.0000000000 124.7350000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-31 2 'Structure model' 1 1 2011-11-02 3 'Structure model' 1 2 2019-09-25 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Experimental preparation' 5 3 'Structure model' Other 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Refinement description' 10 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' struct_conn 4 4 'Structure model' chem_comp 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' entity 9 4 'Structure model' pdbx_entity_nonpoly 10 4 'Structure model' pdbx_initial_refinement_model 11 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_pdbx_database_status.status_code_sf' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_chem_comp.name' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_entity.pdbx_description' 8 4 'Structure model' '_pdbx_entity_nonpoly.name' 9 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 10 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 11 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.5.0110 ? 1 ? ? ? ? DENZO 'data reduction' . ? 2 ? ? ? ? SCALEPACK 'data scaling' . ? 3 ? ? ? ? MOLREP phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2YK4 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;E40D, R102W, G168I, T242A, AND K273N ARE NATURAL VARIANTS IN THE STRAIN N. MENINGITIDIS SEROTYPE B 126E / NRCC4010. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 A ASN 294 ? ? O A HOH 2203 ? ? 1.74 2 1 O2 A EDO 1376 ? ? O A HOH 2221 ? ? 2.05 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A MSE 68 ? ? SE A MSE 68 ? ? CE A MSE 68 ? ? 83.46 98.90 -15.44 2.20 N 2 1 N A ASP 179 ? ? CA A ASP 179 ? ? C A ASP 179 ? ? 87.95 111.00 -23.05 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 207 ? ? -39.86 132.34 2 1 GLU A 239 ? ? 78.44 -6.53 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 178 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASP _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 179 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -88.70 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2125 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.46 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 48 ? CG ? A GLU 1 CG 2 1 Y 1 A GLU 48 ? CD ? A GLU 1 CD 3 1 Y 1 A GLU 48 ? OE1 ? A GLU 1 OE1 4 1 Y 1 A GLU 48 ? OE2 ? A GLU 1 OE2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id ARG _pdbx_unobs_or_zero_occ_residues.auth_seq_id 374 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id ARG _pdbx_unobs_or_zero_occ_residues.label_seq_id 327 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 EGC O1 O N N 98 EGC C2 C N N 99 EGC C3 C N N 100 EGC O4 O N N 101 EGC C5 C N N 102 EGC C6 C N N 103 EGC O7 O N N 104 EGC C8 C N N 105 EGC C9 C N N 106 EGC O10 O N N 107 EGC C11 C N N 108 EGC C12 C N N 109 EGC C14 C N N 110 EGC C15 C N N 111 EGC C17 C N N 112 EGC C18 C N N 113 EGC C20 C N N 114 EGC C21 C N N 115 EGC C23 C N N 116 EGC C24 C N N 117 EGC C26 C N N 118 EGC C27 C N N 119 EGC C29 C Y N 120 EGC C30 C Y N 121 EGC C31 C Y N 122 EGC C32 C Y N 123 EGC C33 C Y N 124 EGC C34 C Y N 125 EGC C35 C N N 126 EGC C36 C N N 127 EGC C37 C N N 128 EGC C38 C N N 129 EGC C39 C N N 130 EGC C40 C N N 131 EGC C41 C N N 132 EGC C42 C N N 133 EGC O13 O N N 134 EGC O16 O N N 135 EGC O19 O N N 136 EGC O22 O N N 137 EGC O25 O N N 138 EGC O28 O N N 139 EGC H1 H N N 140 EGC H21 H N N 141 EGC H22 H N N 142 EGC H31A H N N 143 EGC H32 H N N 144 EGC H51 H N N 145 EGC H52 H N N 146 EGC H61 H N N 147 EGC H62 H N N 148 EGC H81 H N N 149 EGC H82 H N N 150 EGC H91 H N N 151 EGC H92 H N N 152 EGC H111 H N N 153 EGC H112 H N N 154 EGC H121 H N N 155 EGC H122 H N N 156 EGC H141 H N N 157 EGC H142 H N N 158 EGC H151 H N N 159 EGC H152 H N N 160 EGC H171 H N N 161 EGC H172 H N N 162 EGC H181 H N N 163 EGC H182 H N N 164 EGC H201 H N N 165 EGC H202 H N N 166 EGC H211 H N N 167 EGC H212 H N N 168 EGC H231 H N N 169 EGC H232 H N N 170 EGC H241 H N N 171 EGC H242 H N N 172 EGC H261 H N N 173 EGC H262 H N N 174 EGC H271 H N N 175 EGC H272 H N N 176 EGC H30 H N N 177 EGC H31 H N N 178 EGC H33 H N N 179 EGC H34 H N N 180 EGC H361 H N N 181 EGC H362 H N N 182 EGC H363 H N N 183 EGC H371 H N N 184 EGC H372 H N N 185 EGC H373 H N N 186 EGC H381 H N N 187 EGC H382 H N N 188 EGC H401 H N N 189 EGC H402 H N N 190 EGC H403 H N N 191 EGC H411 H N N 192 EGC H412 H N N 193 EGC H413 H N N 194 EGC H421 H N N 195 EGC H422 H N N 196 EGC H423 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MSE N N N N 340 MSE CA C N S 341 MSE C C N N 342 MSE O O N N 343 MSE OXT O N N 344 MSE CB C N N 345 MSE CG C N N 346 MSE SE SE N N 347 MSE CE C N N 348 MSE H H N N 349 MSE H2 H N N 350 MSE HA H N N 351 MSE HXT H N N 352 MSE HB2 H N N 353 MSE HB3 H N N 354 MSE HG2 H N N 355 MSE HG3 H N N 356 MSE HE1 H N N 357 MSE HE2 H N N 358 MSE HE3 H N N 359 PHE N N N N 360 PHE CA C N S 361 PHE C C N N 362 PHE O O N N 363 PHE CB C N N 364 PHE CG C Y N 365 PHE CD1 C Y N 366 PHE CD2 C Y N 367 PHE CE1 C Y N 368 PHE CE2 C Y N 369 PHE CZ C Y N 370 PHE OXT O N N 371 PHE H H N N 372 PHE H2 H N N 373 PHE HA H N N 374 PHE HB2 H N N 375 PHE HB3 H N N 376 PHE HD1 H N N 377 PHE HD2 H N N 378 PHE HE1 H N N 379 PHE HE2 H N N 380 PHE HZ H N N 381 PHE HXT H N N 382 PRO N N N N 383 PRO CA C N S 384 PRO C C N N 385 PRO O O N N 386 PRO CB C N N 387 PRO CG C N N 388 PRO CD C N N 389 PRO OXT O N N 390 PRO H H N N 391 PRO HA H N N 392 PRO HB2 H N N 393 PRO HB3 H N N 394 PRO HG2 H N N 395 PRO HG3 H N N 396 PRO HD2 H N N 397 PRO HD3 H N N 398 PRO HXT H N N 399 SER N N N N 400 SER CA C N S 401 SER C C N N 402 SER O O N N 403 SER CB C N N 404 SER OG O N N 405 SER OXT O N N 406 SER H H N N 407 SER H2 H N N 408 SER HA H N N 409 SER HB2 H N N 410 SER HB3 H N N 411 SER HG H N N 412 SER HXT H N N 413 SO4 S S N N 414 SO4 O1 O N N 415 SO4 O2 O N N 416 SO4 O3 O N N 417 SO4 O4 O N N 418 THR N N N N 419 THR CA C N S 420 THR C C N N 421 THR O O N N 422 THR CB C N R 423 THR OG1 O N N 424 THR CG2 C N N 425 THR OXT O N N 426 THR H H N N 427 THR H2 H N N 428 THR HA H N N 429 THR HB H N N 430 THR HG1 H N N 431 THR HG21 H N N 432 THR HG22 H N N 433 THR HG23 H N N 434 THR HXT H N N 435 TRP N N N N 436 TRP CA C N S 437 TRP C C N N 438 TRP O O N N 439 TRP CB C N N 440 TRP CG C Y N 441 TRP CD1 C Y N 442 TRP CD2 C Y N 443 TRP NE1 N Y N 444 TRP CE2 C Y N 445 TRP CE3 C Y N 446 TRP CZ2 C Y N 447 TRP CZ3 C Y N 448 TRP CH2 C Y N 449 TRP OXT O N N 450 TRP H H N N 451 TRP H2 H N N 452 TRP HA H N N 453 TRP HB2 H N N 454 TRP HB3 H N N 455 TRP HD1 H N N 456 TRP HE1 H N N 457 TRP HE3 H N N 458 TRP HZ2 H N N 459 TRP HZ3 H N N 460 TRP HH2 H N N 461 TRP HXT H N N 462 TYR N N N N 463 TYR CA C N S 464 TYR C C N N 465 TYR O O N N 466 TYR CB C N N 467 TYR CG C Y N 468 TYR CD1 C Y N 469 TYR CD2 C Y N 470 TYR CE1 C Y N 471 TYR CE2 C Y N 472 TYR CZ C Y N 473 TYR OH O N N 474 TYR OXT O N N 475 TYR H H N N 476 TYR H2 H N N 477 TYR HA H N N 478 TYR HB2 H N N 479 TYR HB3 H N N 480 TYR HD1 H N N 481 TYR HD2 H N N 482 TYR HE1 H N N 483 TYR HE2 H N N 484 TYR HH H N N 485 TYR HXT H N N 486 VAL N N N N 487 VAL CA C N S 488 VAL C C N N 489 VAL O O N N 490 VAL CB C N N 491 VAL CG1 C N N 492 VAL CG2 C N N 493 VAL OXT O N N 494 VAL H H N N 495 VAL H2 H N N 496 VAL HA H N N 497 VAL HB H N N 498 VAL HG11 H N N 499 VAL HG12 H N N 500 VAL HG13 H N N 501 VAL HG21 H N N 502 VAL HG22 H N N 503 VAL HG23 H N N 504 VAL HXT H N N 505 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 EGC O1 C2 sing N N 92 EGC O1 H1 sing N N 93 EGC C2 C3 sing N N 94 EGC C2 H21 sing N N 95 EGC C2 H22 sing N N 96 EGC C3 O4 sing N N 97 EGC C3 H31A sing N N 98 EGC C3 H32 sing N N 99 EGC O4 C5 sing N N 100 EGC C5 C6 sing N N 101 EGC C5 H51 sing N N 102 EGC C5 H52 sing N N 103 EGC C6 O7 sing N N 104 EGC C6 H61 sing N N 105 EGC C6 H62 sing N N 106 EGC O7 C8 sing N N 107 EGC C8 C9 sing N N 108 EGC C8 H81 sing N N 109 EGC C8 H82 sing N N 110 EGC C9 O10 sing N N 111 EGC C9 H91 sing N N 112 EGC C9 H92 sing N N 113 EGC O10 C11 sing N N 114 EGC C11 C12 sing N N 115 EGC C11 H111 sing N N 116 EGC C11 H112 sing N N 117 EGC C12 O13 sing N N 118 EGC C12 H121 sing N N 119 EGC C12 H122 sing N N 120 EGC C14 C15 sing N N 121 EGC C14 O13 sing N N 122 EGC C14 H141 sing N N 123 EGC C14 H142 sing N N 124 EGC C15 O16 sing N N 125 EGC C15 H151 sing N N 126 EGC C15 H152 sing N N 127 EGC C17 C18 sing N N 128 EGC C17 O16 sing N N 129 EGC C17 H171 sing N N 130 EGC C17 H172 sing N N 131 EGC C18 O19 sing N N 132 EGC C18 H181 sing N N 133 EGC C18 H182 sing N N 134 EGC C20 C21 sing N N 135 EGC C20 O19 sing N N 136 EGC C20 H201 sing N N 137 EGC C20 H202 sing N N 138 EGC C21 O22 sing N N 139 EGC C21 H211 sing N N 140 EGC C21 H212 sing N N 141 EGC C23 C24 sing N N 142 EGC C23 O22 sing N N 143 EGC C23 H231 sing N N 144 EGC C23 H232 sing N N 145 EGC C24 O25 sing N N 146 EGC C24 H241 sing N N 147 EGC C24 H242 sing N N 148 EGC C26 C27 sing N N 149 EGC C26 O25 sing N N 150 EGC C26 H261 sing N N 151 EGC C26 H262 sing N N 152 EGC C27 O28 sing N N 153 EGC C27 H271 sing N N 154 EGC C27 H272 sing N N 155 EGC C29 C30 doub Y N 156 EGC C29 C34 sing Y N 157 EGC C29 O28 sing N N 158 EGC C30 C31 sing Y N 159 EGC C30 H30 sing N N 160 EGC C31 C32 doub Y N 161 EGC C31 H31 sing N N 162 EGC C32 C33 sing Y N 163 EGC C32 C35 sing N N 164 EGC C33 C34 doub Y N 165 EGC C33 H33 sing N N 166 EGC C34 H34 sing N N 167 EGC C35 C36 sing N N 168 EGC C35 C37 sing N N 169 EGC C35 C38 sing N N 170 EGC C36 H361 sing N N 171 EGC C36 H362 sing N N 172 EGC C36 H363 sing N N 173 EGC C37 H371 sing N N 174 EGC C37 H372 sing N N 175 EGC C37 H373 sing N N 176 EGC C38 C39 sing N N 177 EGC C38 H381 sing N N 178 EGC C38 H382 sing N N 179 EGC C39 C40 sing N N 180 EGC C39 C41 sing N N 181 EGC C39 C42 sing N N 182 EGC C40 H401 sing N N 183 EGC C40 H402 sing N N 184 EGC C40 H403 sing N N 185 EGC C41 H411 sing N N 186 EGC C41 H412 sing N N 187 EGC C41 H413 sing N N 188 EGC C42 H421 sing N N 189 EGC C42 H422 sing N N 190 EGC C42 H423 sing N N 191 GLN N CA sing N N 192 GLN N H sing N N 193 GLN N H2 sing N N 194 GLN CA C sing N N 195 GLN CA CB sing N N 196 GLN CA HA sing N N 197 GLN C O doub N N 198 GLN C OXT sing N N 199 GLN CB CG sing N N 200 GLN CB HB2 sing N N 201 GLN CB HB3 sing N N 202 GLN CG CD sing N N 203 GLN CG HG2 sing N N 204 GLN CG HG3 sing N N 205 GLN CD OE1 doub N N 206 GLN CD NE2 sing N N 207 GLN NE2 HE21 sing N N 208 GLN NE2 HE22 sing N N 209 GLN OXT HXT sing N N 210 GLU N CA sing N N 211 GLU N H sing N N 212 GLU N H2 sing N N 213 GLU CA C sing N N 214 GLU CA CB sing N N 215 GLU CA HA sing N N 216 GLU C O doub N N 217 GLU C OXT sing N N 218 GLU CB CG sing N N 219 GLU CB HB2 sing N N 220 GLU CB HB3 sing N N 221 GLU CG CD sing N N 222 GLU CG HG2 sing N N 223 GLU CG HG3 sing N N 224 GLU CD OE1 doub N N 225 GLU CD OE2 sing N N 226 GLU OE2 HE2 sing N N 227 GLU OXT HXT sing N N 228 GLY N CA sing N N 229 GLY N H sing N N 230 GLY N H2 sing N N 231 GLY CA C sing N N 232 GLY CA HA2 sing N N 233 GLY CA HA3 sing N N 234 GLY C O doub N N 235 GLY C OXT sing N N 236 GLY OXT HXT sing N N 237 HIS N CA sing N N 238 HIS N H sing N N 239 HIS N H2 sing N N 240 HIS CA C sing N N 241 HIS CA CB sing N N 242 HIS CA HA sing N N 243 HIS C O doub N N 244 HIS C OXT sing N N 245 HIS CB CG sing N N 246 HIS CB HB2 sing N N 247 HIS CB HB3 sing N N 248 HIS CG ND1 sing Y N 249 HIS CG CD2 doub Y N 250 HIS ND1 CE1 doub Y N 251 HIS ND1 HD1 sing N N 252 HIS CD2 NE2 sing Y N 253 HIS CD2 HD2 sing N N 254 HIS CE1 NE2 sing Y N 255 HIS CE1 HE1 sing N N 256 HIS NE2 HE2 sing N N 257 HIS OXT HXT sing N N 258 HOH O H1 sing N N 259 HOH O H2 sing N N 260 ILE N CA sing N N 261 ILE N H sing N N 262 ILE N H2 sing N N 263 ILE CA C sing N N 264 ILE CA CB sing N N 265 ILE CA HA sing N N 266 ILE C O doub N N 267 ILE C OXT sing N N 268 ILE CB CG1 sing N N 269 ILE CB CG2 sing N N 270 ILE CB HB sing N N 271 ILE CG1 CD1 sing N N 272 ILE CG1 HG12 sing N N 273 ILE CG1 HG13 sing N N 274 ILE CG2 HG21 sing N N 275 ILE CG2 HG22 sing N N 276 ILE CG2 HG23 sing N N 277 ILE CD1 HD11 sing N N 278 ILE CD1 HD12 sing N N 279 ILE CD1 HD13 sing N N 280 ILE OXT HXT sing N N 281 LEU N CA sing N N 282 LEU N H sing N N 283 LEU N H2 sing N N 284 LEU CA C sing N N 285 LEU CA CB sing N N 286 LEU CA HA sing N N 287 LEU C O doub N N 288 LEU C OXT sing N N 289 LEU CB CG sing N N 290 LEU CB HB2 sing N N 291 LEU CB HB3 sing N N 292 LEU CG CD1 sing N N 293 LEU CG CD2 sing N N 294 LEU CG HG sing N N 295 LEU CD1 HD11 sing N N 296 LEU CD1 HD12 sing N N 297 LEU CD1 HD13 sing N N 298 LEU CD2 HD21 sing N N 299 LEU CD2 HD22 sing N N 300 LEU CD2 HD23 sing N N 301 LEU OXT HXT sing N N 302 LYS N CA sing N N 303 LYS N H sing N N 304 LYS N H2 sing N N 305 LYS CA C sing N N 306 LYS CA CB sing N N 307 LYS CA HA sing N N 308 LYS C O doub N N 309 LYS C OXT sing N N 310 LYS CB CG sing N N 311 LYS CB HB2 sing N N 312 LYS CB HB3 sing N N 313 LYS CG CD sing N N 314 LYS CG HG2 sing N N 315 LYS CG HG3 sing N N 316 LYS CD CE sing N N 317 LYS CD HD2 sing N N 318 LYS CD HD3 sing N N 319 LYS CE NZ sing N N 320 LYS CE HE2 sing N N 321 LYS CE HE3 sing N N 322 LYS NZ HZ1 sing N N 323 LYS NZ HZ2 sing N N 324 LYS NZ HZ3 sing N N 325 LYS OXT HXT sing N N 326 MSE N CA sing N N 327 MSE N H sing N N 328 MSE N H2 sing N N 329 MSE CA C sing N N 330 MSE CA CB sing N N 331 MSE CA HA sing N N 332 MSE C O doub N N 333 MSE C OXT sing N N 334 MSE OXT HXT sing N N 335 MSE CB CG sing N N 336 MSE CB HB2 sing N N 337 MSE CB HB3 sing N N 338 MSE CG SE sing N N 339 MSE CG HG2 sing N N 340 MSE CG HG3 sing N N 341 MSE SE CE sing N N 342 MSE CE HE1 sing N N 343 MSE CE HE2 sing N N 344 MSE CE HE3 sing N N 345 PHE N CA sing N N 346 PHE N H sing N N 347 PHE N H2 sing N N 348 PHE CA C sing N N 349 PHE CA CB sing N N 350 PHE CA HA sing N N 351 PHE C O doub N N 352 PHE C OXT sing N N 353 PHE CB CG sing N N 354 PHE CB HB2 sing N N 355 PHE CB HB3 sing N N 356 PHE CG CD1 doub Y N 357 PHE CG CD2 sing Y N 358 PHE CD1 CE1 sing Y N 359 PHE CD1 HD1 sing N N 360 PHE CD2 CE2 doub Y N 361 PHE CD2 HD2 sing N N 362 PHE CE1 CZ doub Y N 363 PHE CE1 HE1 sing N N 364 PHE CE2 CZ sing Y N 365 PHE CE2 HE2 sing N N 366 PHE CZ HZ sing N N 367 PHE OXT HXT sing N N 368 PRO N CA sing N N 369 PRO N CD sing N N 370 PRO N H sing N N 371 PRO CA C sing N N 372 PRO CA CB sing N N 373 PRO CA HA sing N N 374 PRO C O doub N N 375 PRO C OXT sing N N 376 PRO CB CG sing N N 377 PRO CB HB2 sing N N 378 PRO CB HB3 sing N N 379 PRO CG CD sing N N 380 PRO CG HG2 sing N N 381 PRO CG HG3 sing N N 382 PRO CD HD2 sing N N 383 PRO CD HD3 sing N N 384 PRO OXT HXT sing N N 385 SER N CA sing N N 386 SER N H sing N N 387 SER N H2 sing N N 388 SER CA C sing N N 389 SER CA CB sing N N 390 SER CA HA sing N N 391 SER C O doub N N 392 SER C OXT sing N N 393 SER CB OG sing N N 394 SER CB HB2 sing N N 395 SER CB HB3 sing N N 396 SER OG HG sing N N 397 SER OXT HXT sing N N 398 SO4 S O1 doub N N 399 SO4 S O2 doub N N 400 SO4 S O3 sing N N 401 SO4 S O4 sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 VAL N CA sing N N 471 VAL N H sing N N 472 VAL N H2 sing N N 473 VAL CA C sing N N 474 VAL CA CB sing N N 475 VAL CA HA sing N N 476 VAL C O doub N N 477 VAL C OXT sing N N 478 VAL CB CG1 sing N N 479 VAL CB CG2 sing N N 480 VAL CB HB sing N N 481 VAL CG1 HG11 sing N N 482 VAL CG1 HG12 sing N N 483 VAL CG1 HG13 sing N N 484 VAL CG2 HG21 sing N N 485 VAL CG2 HG22 sing N N 486 VAL CG2 HG23 sing N N 487 VAL OXT HXT sing N N 488 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL ; EGC 3 1,2-ETHANEDIOL EDO 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2YK5 _pdbx_initial_refinement_model.details 'PDB ENTRY 2YK5' #