data_2YOL # _entry.id 2YOL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YOL pdb_00002yol 10.2210/pdb2yol/pdb PDBE EBI-54573 ? ? WWPDB D_1290054573 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YOL _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-10-25 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hammamy, M.Z.' 1 'Haase, C.' 2 'Hammami, M.' 3 'Hilgenfeld, R.' 4 'Steinmetzer, T.' 5 # _citation.id primary _citation.title 'Development and Characterization of New Peptidomimetic Inhibitors of the West Nile Virus Ns2B-Ns3 Protease.' _citation.journal_abbrev Chemmedchem _citation.journal_volume 8 _citation.page_first 231 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM ? _citation.country DE _citation.journal_id_ISSN 1860-7179 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23307694 _citation.pdbx_database_id_DOI 10.1002/CMDC.201200497 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hammamy, M.Z.' 1 ? primary 'Haase, C.' 2 ? primary 'Hammami, M.' 3 ? primary 'Hilgenfeld, R.' 4 ? primary 'Steinmetzer, T.' 5 ? # _cell.entry_id 2YOL _cell.length_a 118.700 _cell.length_b 118.700 _cell.length_c 66.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YOL _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SERINE PROTEASE SUBUNIT NS2B, SERINE PROTEASE NS3' 24602.377 1 '3.4.21.91, 3.6.1.15, 3.6.4.13' ? 'NS2B, RESIDUES 1420-1466,AND NS3,1502-1671' ;RESIDUES SER47 TO PRO91 BELONG TO NS2B, WHICH WE DESIGNATED AS MOLECULE A IN THE ASSOCIATED PUBLICATION. RESIDUES GLY1002 TO GLU1169 (RESIDUE NUMBERS WERE INCREMENTED BY 1000) BELONG TO NS3, WHICH WE DESIGNATED AS MOLECULE B IN THE ASSOCIATED PUBLICATION. ; 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn ;(S)-6-amino-N-((S)-6-amino-1-(((1r,4S)-4-guanidinocyclohexyl)methylamino)-1-oxohexan-2-yl)-2-(2-(3,4-dichlorophenyl)acetamido)hexanamide ; 613.623 1 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 5 water nat water 18.015 7 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;FLAVIVIRIN PROTEASE NS2B REGULATORY SUBUNIT, NON-STRUCTURAL PROTEIN 2B, FLAVIVIRIN PROTEASE NS3 CATALYTIC SUBUNIT, NON-STRUCTURAL PROTEIN 3 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMTDMWIERTADITWESDAEITGSSERVDVRLDDDGNFQLMNDPGAPWAGGGGSGGGGGGVLWDTPSPKEYKKGDTTT GVYRIMTRGLLGSYQAGAGVMVEGVFHTLWHTTKGAALMSGEGRLDPYWGSVKEDRLCYGGPWKLQHKWNGHDEVQMIVV EPGKNVKNVQTKPGVFKTPEGEIGAVTLDYPTGTSGSPIVDKNGDVIGLYGNGVIMPNGSYISAIVQGER ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMTDMWIERTADITWESDAEITGSSERVDVRLDDDGNFQLMNDPGAPWAGGGGSGGGGGGVLWDTPSPKEYKKGDTTT GVYRIMTRGLLGSYQAGAGVMVEGVFHTLWHTTKGAALMSGEGRLDPYWGSVKEDRLCYGGPWKLQHKWNGHDEVQMIVV EPGKNVKNVQTKPGVFKTPEGEIGAVTLDYPTGTSGSPIVDKNGDVIGLYGNGVIMPNGSYISAIVQGER ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 ASP n 1 7 MET n 1 8 TRP n 1 9 ILE n 1 10 GLU n 1 11 ARG n 1 12 THR n 1 13 ALA n 1 14 ASP n 1 15 ILE n 1 16 THR n 1 17 TRP n 1 18 GLU n 1 19 SER n 1 20 ASP n 1 21 ALA n 1 22 GLU n 1 23 ILE n 1 24 THR n 1 25 GLY n 1 26 SER n 1 27 SER n 1 28 GLU n 1 29 ARG n 1 30 VAL n 1 31 ASP n 1 32 VAL n 1 33 ARG n 1 34 LEU n 1 35 ASP n 1 36 ASP n 1 37 ASP n 1 38 GLY n 1 39 ASN n 1 40 PHE n 1 41 GLN n 1 42 LEU n 1 43 MET n 1 44 ASN n 1 45 ASP n 1 46 PRO n 1 47 GLY n 1 48 ALA n 1 49 PRO n 1 50 TRP n 1 51 ALA n 1 52 GLY n 1 53 GLY n 1 54 GLY n 1 55 GLY n 1 56 SER n 1 57 GLY n 1 58 GLY n 1 59 GLY n 1 60 GLY n 1 61 GLY n 1 62 GLY n 1 63 VAL n 1 64 LEU n 1 65 TRP n 1 66 ASP n 1 67 THR n 1 68 PRO n 1 69 SER n 1 70 PRO n 1 71 LYS n 1 72 GLU n 1 73 TYR n 1 74 LYS n 1 75 LYS n 1 76 GLY n 1 77 ASP n 1 78 THR n 1 79 THR n 1 80 THR n 1 81 GLY n 1 82 VAL n 1 83 TYR n 1 84 ARG n 1 85 ILE n 1 86 MET n 1 87 THR n 1 88 ARG n 1 89 GLY n 1 90 LEU n 1 91 LEU n 1 92 GLY n 1 93 SER n 1 94 TYR n 1 95 GLN n 1 96 ALA n 1 97 GLY n 1 98 ALA n 1 99 GLY n 1 100 VAL n 1 101 MET n 1 102 VAL n 1 103 GLU n 1 104 GLY n 1 105 VAL n 1 106 PHE n 1 107 HIS n 1 108 THR n 1 109 LEU n 1 110 TRP n 1 111 HIS n 1 112 THR n 1 113 THR n 1 114 LYS n 1 115 GLY n 1 116 ALA n 1 117 ALA n 1 118 LEU n 1 119 MET n 1 120 SER n 1 121 GLY n 1 122 GLU n 1 123 GLY n 1 124 ARG n 1 125 LEU n 1 126 ASP n 1 127 PRO n 1 128 TYR n 1 129 TRP n 1 130 GLY n 1 131 SER n 1 132 VAL n 1 133 LYS n 1 134 GLU n 1 135 ASP n 1 136 ARG n 1 137 LEU n 1 138 CYS n 1 139 TYR n 1 140 GLY n 1 141 GLY n 1 142 PRO n 1 143 TRP n 1 144 LYS n 1 145 LEU n 1 146 GLN n 1 147 HIS n 1 148 LYS n 1 149 TRP n 1 150 ASN n 1 151 GLY n 1 152 HIS n 1 153 ASP n 1 154 GLU n 1 155 VAL n 1 156 GLN n 1 157 MET n 1 158 ILE n 1 159 VAL n 1 160 VAL n 1 161 GLU n 1 162 PRO n 1 163 GLY n 1 164 LYS n 1 165 ASN n 1 166 VAL n 1 167 LYS n 1 168 ASN n 1 169 VAL n 1 170 GLN n 1 171 THR n 1 172 LYS n 1 173 PRO n 1 174 GLY n 1 175 VAL n 1 176 PHE n 1 177 LYS n 1 178 THR n 1 179 PRO n 1 180 GLU n 1 181 GLY n 1 182 GLU n 1 183 ILE n 1 184 GLY n 1 185 ALA n 1 186 VAL n 1 187 THR n 1 188 LEU n 1 189 ASP n 1 190 TYR n 1 191 PRO n 1 192 THR n 1 193 GLY n 1 194 THR n 1 195 SER n 1 196 GLY n 1 197 SER n 1 198 PRO n 1 199 ILE n 1 200 VAL n 1 201 ASP n 1 202 LYS n 1 203 ASN n 1 204 GLY n 1 205 ASP n 1 206 VAL n 1 207 ILE n 1 208 GLY n 1 209 LEU n 1 210 TYR n 1 211 GLY n 1 212 ASN n 1 213 GLY n 1 214 VAL n 1 215 ILE n 1 216 MET n 1 217 PRO n 1 218 ASN n 1 219 GLY n 1 220 SER n 1 221 TYR n 1 222 ILE n 1 223 SER n 1 224 ALA n 1 225 ILE n 1 226 VAL n 1 227 GLN n 1 228 GLY n 1 229 GLU n 1 230 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'WEST NILE VIRUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11082 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant GOLD _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-15B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_WNV _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P06935 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YOL A 5 ? 51 ? P06935 1420 ? 1466 ? 50 96 2 1 2YOL A 61 ? 230 ? P06935 1502 ? 1671 ? 1001 1170 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YOL GLY A 1 ? UNP P06935 ? ? 'expression tag' 46 1 1 2YOL SER A 2 ? UNP P06935 ? ? 'expression tag' 47 2 1 2YOL HIS A 3 ? UNP P06935 ? ? 'expression tag' 48 3 1 2YOL MET A 4 ? UNP P06935 ? ? 'expression tag' 49 4 1 2YOL GLY A 52 ? UNP P06935 ? ? linker 97 5 1 2YOL GLY A 53 ? UNP P06935 ? ? linker 98 6 1 2YOL GLY A 54 ? UNP P06935 ? ? linker 99 7 1 2YOL GLY A 55 ? UNP P06935 ? ? linker 100 8 1 2YOL SER A 56 ? UNP P06935 ? ? linker 101 9 1 2YOL GLY A 57 ? UNP P06935 ? ? linker 102 10 1 2YOL GLY A 58 ? UNP P06935 ? ? linker 103 11 1 2YOL GLY A 59 ? UNP P06935 ? ? linker 104 12 1 2YOL GLY A 60 ? UNP P06935 ? ? linker 105 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EBN non-polymer . ;(S)-6-amino-N-((S)-6-amino-1-(((1r,4S)-4-guanidinocyclohexyl)methylamino)-1-oxohexan-2-yl)-2-(2-(3,4-dichlorophenyl)acetamido)hexanamide ; 3,4-dichlorophenylacetyl-Lys-Lys-GCMA 'C28 H46 Cl2 N8 O3' 613.623 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YOL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.19 _exptl_crystal.density_percent_sol 76.3 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% (W/V) POLYETHYLENE GLYCOL (PEG)3350, 0.1 M HEPES, PH 7.4' # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2012-03-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_wavelength 0.91841 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YOL _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 51.38 _reflns.d_resolution_high 3.20 _reflns.number_obs 9157 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.15 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.20 _reflns_shell.d_res_low 3.37 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.49 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.50 _reflns_shell.pdbx_redundancy 9.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YOL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8685 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 102.77 _refine.ls_d_res_high 3.20 _refine.ls_percent_reflns_obs 99.73 _refine.ls_R_factor_obs 0.18849 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18759 _refine.ls_R_factor_R_free 0.20681 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 437 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.922 _refine.correlation_coeff_Fo_to_Fc_free 0.899 _refine.B_iso_mean 51.529 _refine.aniso_B[1][1] -0.60 _refine.aniso_B[2][2] -0.60 _refine.aniso_B[3][3] 0.90 _refine.aniso_B[1][2] -0.30 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2FP7' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.572 _refine.pdbx_overall_ESU_R_Free 0.297 _refine.overall_SU_ML 0.209 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 12.294 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1629 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 1679 _refine_hist.d_res_high 3.20 _refine_hist.d_res_low 102.77 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 1721 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.489 1.961 ? 2333 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.818 5.000 ? 213 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.233 25.000 ? 74 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.881 15.000 ? 278 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.161 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 248 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1309 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.682 1.500 ? 1050 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.275 2.000 ? 1692 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.304 3.000 ? 671 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.342 4.500 ? 639 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.200 _refine_ls_shell.d_res_low 3.283 _refine_ls_shell.number_reflns_R_work 629 _refine_ls_shell.R_factor_R_work 0.246 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.276 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 32 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2YOL _struct.title 'West Nile Virus NS2B-NS3 protease in complex with 3,4- dichlorophenylacetyl-Lys-Lys-GCMA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YOL _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'SERINE PROTEASE, HYDROLASE, INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 109 ? LYS A 114 ? LEU A 1049 LYS A 1054 1 ? 6 HELX_P HELX_P2 2 PRO A 191 ? SER A 195 ? PRO A 1131 SER A 1135 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 147 NE2 ? ? ? 5_554 D NI . NI ? ? A HIS 1087 A NI 2171 1_555 ? ? ? ? ? ? ? 1.789 ? ? metalc2 metalc ? ? A HIS 152 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 1092 A NI 2171 1_555 ? ? ? ? ? ? ? 2.191 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 5 ? AC ? 6 ? AD ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? parallel AC 3 4 ? anti-parallel AC 4 5 ? anti-parallel AC 5 6 ? anti-parallel AD 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 MET A 7 ? ALA A 13 ? MET A 52 ALA A 58 AA 2 GLY A 81 ? GLY A 89 ? GLY A 1021 GLY A 1029 AA 3 GLY A 92 ? VAL A 102 ? GLY A 1032 VAL A 1042 AA 4 VAL A 105 ? THR A 108 ? VAL A 1045 THR A 1048 AA 5 ARG A 136 ? TYR A 139 ? ARG A 1076 TYR A 1079 AA 6 PRO A 127 ? SER A 131 ? PRO A 1067 SER A 1071 AB 1 GLU A 22 ? ILE A 23 ? GLU A 67 ILE A 68 AB 2 LYS A 167 ? THR A 171 ? LYS A 1107 THR A 1111 AB 3 VAL A 155 ? VAL A 159 ? VAL A 1095 VAL A 1099 AB 4 PRO A 198 ? VAL A 200 ? PRO A 1138 VAL A 1140 AB 5 VAL A 206 ? LEU A 209 ? VAL A 1146 LEU A 1149 AC 1 PHE A 40 ? LEU A 42 ? PHE A 85 LEU A 87 AC 2 ARG A 29 ? LEU A 34 ? ARG A 74 LEU A 79 AC 3 GLY A 174 ? THR A 178 ? GLY A 1114 THR A 1118 AC 4 GLY A 181 ? VAL A 186 ? GLY A 1121 VAL A 1126 AC 5 TYR A 221 ? ALA A 224 ? TYR A 1161 ALA A 1164 AC 6 GLY A 213 ? ILE A 215 ? GLY A 1153 ILE A 1155 AD 1 LEU A 118 ? SER A 120 ? LEU A 1058 SER A 1060 AD 2 GLY A 123 ? LEU A 125 ? GLY A 1063 LEU A 1065 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N THR A 12 ? N THR A 57 O VAL A 82 ? O VAL A 1022 AA 2 3 N GLY A 89 ? N GLY A 1029 O GLY A 92 ? O GLY A 1032 AA 3 4 N VAL A 102 ? N VAL A 1042 O VAL A 105 ? O VAL A 1045 AA 4 5 N THR A 108 ? N THR A 1048 O LEU A 137 ? O LEU A 1077 AA 5 6 O CYS A 138 ? O CYS A 1078 N TYR A 128 ? N TYR A 1068 AB 1 2 N GLU A 22 ? N GLU A 67 O ASN A 168 ? O ASN A 1108 AB 2 3 N THR A 171 ? N THR A 1111 O VAL A 155 ? O VAL A 1095 AB 3 4 N ILE A 158 ? N ILE A 1098 O PRO A 198 ? O PRO A 1138 AB 4 5 O ILE A 199 ? O ILE A 1139 N ILE A 207 ? N ILE A 1147 AC 1 2 N GLN A 41 ? N GLN A 86 O ARG A 33 ? O ARG A 78 AC 2 3 N VAL A 30 ? N VAL A 75 O VAL A 175 ? O VAL A 1115 AC 3 4 N THR A 178 ? N THR A 1118 O GLY A 181 ? O GLY A 1121 AC 4 5 N VAL A 186 ? N VAL A 1126 O SER A 223 ? O SER A 1163 AC 5 6 N ILE A 222 ? N ILE A 1162 O VAL A 214 ? O VAL A 1154 AD 1 2 N SER A 120 ? N SER A 1060 O GLY A 123 ? O GLY A 1063 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EBN 2170 ? 16 'BINDING SITE FOR RESIDUE EBN A 2170' AC2 Software A CL 2069 ? 2 'BINDING SITE FOR RESIDUE CL A 2069' AC3 Software A NI 2171 ? 2 'BINDING SITE FOR RESIDUE NI A 2171' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 TRP A 8 ? TRP A 53 . ? 2_544 ? 2 AC1 16 GLU A 10 ? GLU A 55 . ? 2_544 ? 3 AC1 16 GLY A 38 ? GLY A 83 . ? 1_555 ? 4 AC1 16 PHE A 40 ? PHE A 85 . ? 1_555 ? 5 AC1 16 HIS A 111 ? HIS A 1051 . ? 1_555 ? 6 AC1 16 ASP A 135 ? ASP A 1075 . ? 1_555 ? 7 AC1 16 ASP A 189 ? ASP A 1129 . ? 1_555 ? 8 AC1 16 TYR A 190 ? TYR A 1130 . ? 1_555 ? 9 AC1 16 THR A 192 ? THR A 1132 . ? 1_555 ? 10 AC1 16 SER A 195 ? SER A 1135 . ? 1_555 ? 11 AC1 16 TYR A 210 ? TYR A 1150 . ? 1_555 ? 12 AC1 16 GLY A 211 ? GLY A 1151 . ? 1_555 ? 13 AC1 16 ASN A 212 ? ASN A 1152 . ? 1_555 ? 14 AC1 16 GLY A 213 ? GLY A 1153 . ? 1_555 ? 15 AC1 16 ILE A 215 ? ILE A 1155 . ? 1_555 ? 16 AC1 16 TYR A 221 ? TYR A 1161 . ? 1_555 ? 17 AC2 2 ILE A 15 ? ILE A 60 . ? 1_555 ? 18 AC2 2 THR A 80 ? THR A 1020 . ? 1_555 ? 19 AC3 2 HIS A 147 ? HIS A 1087 . ? 5_554 ? 20 AC3 2 HIS A 152 ? HIS A 1092 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YOL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YOL _atom_sites.fract_transf_matrix[1][1] 0.008425 _atom_sites.fract_transf_matrix[1][2] 0.004864 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009728 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015083 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 46 ? ? ? A . n A 1 2 SER 2 47 47 SER SER A . n A 1 3 HIS 3 48 48 HIS HIS A . n A 1 4 MET 4 49 49 MET MET A . n A 1 5 THR 5 50 50 THR THR A . n A 1 6 ASP 6 51 51 ASP ASP A . n A 1 7 MET 7 52 52 MET MET A . n A 1 8 TRP 8 53 53 TRP TRP A . n A 1 9 ILE 9 54 54 ILE ILE A . n A 1 10 GLU 10 55 55 GLU GLU A . n A 1 11 ARG 11 56 56 ARG ARG A . n A 1 12 THR 12 57 57 THR THR A . n A 1 13 ALA 13 58 58 ALA ALA A . n A 1 14 ASP 14 59 59 ASP ASP A . n A 1 15 ILE 15 60 60 ILE ILE A . n A 1 16 THR 16 61 61 THR THR A . n A 1 17 TRP 17 62 62 TRP TRP A . n A 1 18 GLU 18 63 63 GLU GLU A . n A 1 19 SER 19 64 64 SER SER A . n A 1 20 ASP 20 65 65 ASP ASP A . n A 1 21 ALA 21 66 66 ALA ALA A . n A 1 22 GLU 22 67 67 GLU GLU A . n A 1 23 ILE 23 68 68 ILE ILE A . n A 1 24 THR 24 69 69 THR THR A . n A 1 25 GLY 25 70 70 GLY GLY A . n A 1 26 SER 26 71 71 SER SER A . n A 1 27 SER 27 72 72 SER SER A . n A 1 28 GLU 28 73 73 GLU GLU A . n A 1 29 ARG 29 74 74 ARG ARG A . n A 1 30 VAL 30 75 75 VAL VAL A . n A 1 31 ASP 31 76 76 ASP ASP A . n A 1 32 VAL 32 77 77 VAL VAL A . n A 1 33 ARG 33 78 78 ARG ARG A . n A 1 34 LEU 34 79 79 LEU LEU A . n A 1 35 ASP 35 80 80 ASP ASP A . n A 1 36 ASP 36 81 81 ASP ASP A . n A 1 37 ASP 37 82 82 ASP ASP A . n A 1 38 GLY 38 83 83 GLY GLY A . n A 1 39 ASN 39 84 84 ASN ASN A . n A 1 40 PHE 40 85 85 PHE PHE A . n A 1 41 GLN 41 86 86 GLN GLN A . n A 1 42 LEU 42 87 87 LEU LEU A . n A 1 43 MET 43 88 88 MET MET A . n A 1 44 ASN 44 89 89 ASN ASN A . n A 1 45 ASP 45 90 90 ASP ASP A . n A 1 46 PRO 46 91 91 PRO PRO A . n A 1 47 GLY 47 92 ? ? ? A . n A 1 48 ALA 48 93 ? ? ? A . n A 1 49 PRO 49 94 ? ? ? A . n A 1 50 TRP 50 95 ? ? ? A . n A 1 51 ALA 51 96 ? ? ? A . n A 1 52 GLY 52 97 ? ? ? A . n A 1 53 GLY 53 98 ? ? ? A . n A 1 54 GLY 54 99 ? ? ? A . n A 1 55 GLY 55 100 ? ? ? A . n A 1 56 SER 56 101 ? ? ? A . n A 1 57 GLY 57 102 ? ? ? A . n A 1 58 GLY 58 103 ? ? ? A . n A 1 59 GLY 59 104 ? ? ? A . n A 1 60 GLY 60 105 ? ? ? A . n A 1 61 GLY 61 1001 ? ? ? A . n A 1 62 GLY 62 1002 1002 GLY GLY A . n A 1 63 VAL 63 1003 1003 VAL VAL A . n A 1 64 LEU 64 1004 1004 LEU LEU A . n A 1 65 TRP 65 1005 1005 TRP TRP A . n A 1 66 ASP 66 1006 1006 ASP ASP A . n A 1 67 THR 67 1007 1007 THR THR A . n A 1 68 PRO 68 1008 ? ? ? A . n A 1 69 SER 69 1009 1009 SER SER A . n A 1 70 PRO 70 1010 1010 PRO PRO A . n A 1 71 LYS 71 1011 1011 LYS LYS A . n A 1 72 GLU 72 1012 1012 GLU GLU A . n A 1 73 TYR 73 1013 1013 TYR TYR A . n A 1 74 LYS 74 1014 1014 LYS LYS A . n A 1 75 LYS 75 1015 1015 LYS LYS A . n A 1 76 GLY 76 1016 1016 GLY GLY A . n A 1 77 ASP 77 1017 1017 ASP ASP A . n A 1 78 THR 78 1018 1018 THR THR A . n A 1 79 THR 79 1019 1019 THR THR A . n A 1 80 THR 80 1020 1020 THR THR A . n A 1 81 GLY 81 1021 1021 GLY GLY A . n A 1 82 VAL 82 1022 1022 VAL VAL A . n A 1 83 TYR 83 1023 1023 TYR TYR A . n A 1 84 ARG 84 1024 1024 ARG ARG A . n A 1 85 ILE 85 1025 1025 ILE ILE A . n A 1 86 MET 86 1026 1026 MET MET A . n A 1 87 THR 87 1027 1027 THR THR A . n A 1 88 ARG 88 1028 1028 ARG ARG A . n A 1 89 GLY 89 1029 1029 GLY GLY A . n A 1 90 LEU 90 1030 1030 LEU LEU A . n A 1 91 LEU 91 1031 1031 LEU LEU A . n A 1 92 GLY 92 1032 1032 GLY GLY A . n A 1 93 SER 93 1033 1033 SER SER A . n A 1 94 TYR 94 1034 1034 TYR TYR A . n A 1 95 GLN 95 1035 1035 GLN GLN A . n A 1 96 ALA 96 1036 1036 ALA ALA A . n A 1 97 GLY 97 1037 1037 GLY GLY A . n A 1 98 ALA 98 1038 1038 ALA ALA A . n A 1 99 GLY 99 1039 1039 GLY GLY A . n A 1 100 VAL 100 1040 1040 VAL VAL A . n A 1 101 MET 101 1041 1041 MET MET A . n A 1 102 VAL 102 1042 1042 VAL VAL A . n A 1 103 GLU 103 1043 1043 GLU GLU A . n A 1 104 GLY 104 1044 1044 GLY GLY A . n A 1 105 VAL 105 1045 1045 VAL VAL A . n A 1 106 PHE 106 1046 1046 PHE PHE A . n A 1 107 HIS 107 1047 1047 HIS HIS A . n A 1 108 THR 108 1048 1048 THR THR A . n A 1 109 LEU 109 1049 1049 LEU LEU A . n A 1 110 TRP 110 1050 1050 TRP TRP A . n A 1 111 HIS 111 1051 1051 HIS HIS A . n A 1 112 THR 112 1052 1052 THR THR A . n A 1 113 THR 113 1053 1053 THR THR A . n A 1 114 LYS 114 1054 1054 LYS LYS A . n A 1 115 GLY 115 1055 1055 GLY GLY A . n A 1 116 ALA 116 1056 1056 ALA ALA A . n A 1 117 ALA 117 1057 1057 ALA ALA A . n A 1 118 LEU 118 1058 1058 LEU LEU A . n A 1 119 MET 119 1059 1059 MET MET A . n A 1 120 SER 120 1060 1060 SER SER A . n A 1 121 GLY 121 1061 1061 GLY GLY A . n A 1 122 GLU 122 1062 1062 GLU GLU A . n A 1 123 GLY 123 1063 1063 GLY GLY A . n A 1 124 ARG 124 1064 1064 ARG ARG A . n A 1 125 LEU 125 1065 1065 LEU LEU A . n A 1 126 ASP 126 1066 1066 ASP ASP A . n A 1 127 PRO 127 1067 1067 PRO PRO A . n A 1 128 TYR 128 1068 1068 TYR TYR A . n A 1 129 TRP 129 1069 1069 TRP TRP A . n A 1 130 GLY 130 1070 1070 GLY GLY A . n A 1 131 SER 131 1071 1071 SER SER A . n A 1 132 VAL 132 1072 1072 VAL VAL A . n A 1 133 LYS 133 1073 1073 LYS LYS A . n A 1 134 GLU 134 1074 1074 GLU GLU A . n A 1 135 ASP 135 1075 1075 ASP ASP A . n A 1 136 ARG 136 1076 1076 ARG ARG A . n A 1 137 LEU 137 1077 1077 LEU LEU A . n A 1 138 CYS 138 1078 1078 CYS CYS A . n A 1 139 TYR 139 1079 1079 TYR TYR A . n A 1 140 GLY 140 1080 1080 GLY GLY A . n A 1 141 GLY 141 1081 1081 GLY GLY A . n A 1 142 PRO 142 1082 1082 PRO PRO A . n A 1 143 TRP 143 1083 1083 TRP TRP A . n A 1 144 LYS 144 1084 1084 LYS LYS A . n A 1 145 LEU 145 1085 1085 LEU LEU A . n A 1 146 GLN 146 1086 1086 GLN GLN A . n A 1 147 HIS 147 1087 1087 HIS HIS A . n A 1 148 LYS 148 1088 1088 LYS LYS A . n A 1 149 TRP 149 1089 1089 TRP TRP A . n A 1 150 ASN 150 1090 1090 ASN ASN A . n A 1 151 GLY 151 1091 1091 GLY GLY A . n A 1 152 HIS 152 1092 1092 HIS HIS A . n A 1 153 ASP 153 1093 1093 ASP ASP A . n A 1 154 GLU 154 1094 1094 GLU GLU A . n A 1 155 VAL 155 1095 1095 VAL VAL A . n A 1 156 GLN 156 1096 1096 GLN GLN A . n A 1 157 MET 157 1097 1097 MET MET A . n A 1 158 ILE 158 1098 1098 ILE ILE A . n A 1 159 VAL 159 1099 1099 VAL VAL A . n A 1 160 VAL 160 1100 1100 VAL VAL A . n A 1 161 GLU 161 1101 1101 GLU GLU A . n A 1 162 PRO 162 1102 1102 PRO PRO A . n A 1 163 GLY 163 1103 1103 GLY GLY A . n A 1 164 LYS 164 1104 1104 LYS LYS A . n A 1 165 ASN 165 1105 1105 ASN ASN A . n A 1 166 VAL 166 1106 1106 VAL VAL A . n A 1 167 LYS 167 1107 1107 LYS LYS A . n A 1 168 ASN 168 1108 1108 ASN ASN A . n A 1 169 VAL 169 1109 1109 VAL VAL A . n A 1 170 GLN 170 1110 1110 GLN GLN A . n A 1 171 THR 171 1111 1111 THR THR A . n A 1 172 LYS 172 1112 1112 LYS LYS A . n A 1 173 PRO 173 1113 1113 PRO PRO A . n A 1 174 GLY 174 1114 1114 GLY GLY A . n A 1 175 VAL 175 1115 1115 VAL VAL A . n A 1 176 PHE 176 1116 1116 PHE PHE A . n A 1 177 LYS 177 1117 1117 LYS LYS A . n A 1 178 THR 178 1118 1118 THR THR A . n A 1 179 PRO 179 1119 1119 PRO PRO A . n A 1 180 GLU 180 1120 1120 GLU GLU A . n A 1 181 GLY 181 1121 1121 GLY GLY A . n A 1 182 GLU 182 1122 1122 GLU GLU A . n A 1 183 ILE 183 1123 1123 ILE ILE A . n A 1 184 GLY 184 1124 1124 GLY GLY A . n A 1 185 ALA 185 1125 1125 ALA ALA A . n A 1 186 VAL 186 1126 1126 VAL VAL A . n A 1 187 THR 187 1127 1127 THR THR A . n A 1 188 LEU 188 1128 1128 LEU LEU A . n A 1 189 ASP 189 1129 1129 ASP ASP A . n A 1 190 TYR 190 1130 1130 TYR TYR A . n A 1 191 PRO 191 1131 1131 PRO PRO A . n A 1 192 THR 192 1132 1132 THR THR A . n A 1 193 GLY 193 1133 1133 GLY GLY A . n A 1 194 THR 194 1134 1134 THR THR A . n A 1 195 SER 195 1135 1135 SER SER A . n A 1 196 GLY 196 1136 1136 GLY GLY A . n A 1 197 SER 197 1137 1137 SER SER A . n A 1 198 PRO 198 1138 1138 PRO PRO A . n A 1 199 ILE 199 1139 1139 ILE ILE A . n A 1 200 VAL 200 1140 1140 VAL VAL A . n A 1 201 ASP 201 1141 1141 ASP ASP A . n A 1 202 LYS 202 1142 1142 LYS LYS A . n A 1 203 ASN 203 1143 1143 ASN ASN A . n A 1 204 GLY 204 1144 1144 GLY GLY A . n A 1 205 ASP 205 1145 1145 ASP ASP A . n A 1 206 VAL 206 1146 1146 VAL VAL A . n A 1 207 ILE 207 1147 1147 ILE ILE A . n A 1 208 GLY 208 1148 1148 GLY GLY A . n A 1 209 LEU 209 1149 1149 LEU LEU A . n A 1 210 TYR 210 1150 1150 TYR TYR A . n A 1 211 GLY 211 1151 1151 GLY GLY A . n A 1 212 ASN 212 1152 1152 ASN ASN A . n A 1 213 GLY 213 1153 1153 GLY GLY A . n A 1 214 VAL 214 1154 1154 VAL VAL A . n A 1 215 ILE 215 1155 1155 ILE ILE A . n A 1 216 MET 216 1156 1156 MET MET A . n A 1 217 PRO 217 1157 1157 PRO PRO A . n A 1 218 ASN 218 1158 1158 ASN ASN A . n A 1 219 GLY 219 1159 1159 GLY GLY A . n A 1 220 SER 220 1160 1160 SER SER A . n A 1 221 TYR 221 1161 1161 TYR TYR A . n A 1 222 ILE 222 1162 1162 ILE ILE A . n A 1 223 SER 223 1163 1163 SER SER A . n A 1 224 ALA 224 1164 1164 ALA ALA A . n A 1 225 ILE 225 1165 1165 ILE ILE A . n A 1 226 VAL 226 1166 1166 VAL VAL A . n A 1 227 GLN 227 1167 1167 GLN GLN A . n A 1 228 GLY 228 1168 1168 GLY GLY A . n A 1 229 GLU 229 1169 1169 GLU GLU A . n A 1 230 ARG 230 1170 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 2069 2069 CL CL A . C 3 EBN 1 2170 2170 EBN EBN A . D 4 NI 1 2171 2171 NI NI A . E 5 HOH 1 3001 3001 HOH HOH A . E 5 HOH 2 3002 3002 HOH HOH A . E 5 HOH 3 3003 3003 HOH HOH A . E 5 HOH 4 3004 3004 HOH HOH A . E 5 HOH 5 3005 3005 HOH HOH A . E 5 HOH 6 3006 3006 HOH HOH A . E 5 HOH 7 3007 3007 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id HIS _pdbx_struct_conn_angle.ptnr1_label_seq_id 147 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr1_auth_seq_id 1087 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 5_554 _pdbx_struct_conn_angle.ptnr2_label_atom_id NI _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id NI _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id NI _pdbx_struct_conn_angle.ptnr2_auth_seq_id 2171 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id HIS _pdbx_struct_conn_angle.ptnr3_label_seq_id 152 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr3_auth_seq_id 1092 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 85.3 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-27 2 'Structure model' 1 1 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other 5 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_initial_refinement_model 6 2 'Structure model' pdbx_struct_conn_angle 7 2 'Structure model' struct_conn 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_sf' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 10 2 'Structure model' '_struct_conn.pdbx_dist_value' 11 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 2 'Structure model' '_struct_conn.ptnr1_symmetry' 18 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 19 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 20 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 21 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 22 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 23 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 24 2 'Structure model' '_struct_conn.ptnr2_symmetry' 25 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 26 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 27 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 2YOL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES 46-49 REMAINED FROM THE N-TERMINAL HIS TAG AFTER THROMBIN CLEAVAGE. RESIDUES 97-105 BELONG TO THE ARTIFICIAL LINKER BETWEEN NS2B AND NS3 ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 48 ? ? -146.74 59.32 2 1 THR A 69 ? ? -176.68 -176.37 3 1 ASN A 89 ? ? 93.87 75.05 4 1 PRO A 1010 ? ? -57.36 96.06 5 1 THR A 1018 ? ? 59.66 16.41 6 1 HIS A 1092 ? ? -141.36 -24.34 7 1 VAL A 1100 ? ? -102.13 63.77 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 78 ? CD ? A ARG 33 CD 2 1 Y 0 A ARG 78 ? NE ? A ARG 33 NE 3 1 Y 0 A ARG 78 ? CZ ? A ARG 33 CZ 4 1 Y 0 A ARG 78 ? NH1 ? A ARG 33 NH1 5 1 Y 0 A ARG 78 ? NH2 ? A ARG 33 NH2 6 1 Y 0 A LYS 1011 ? CD ? A LYS 71 CD 7 1 Y 0 A LYS 1011 ? CE ? A LYS 71 CE 8 1 Y 0 A LYS 1011 ? NZ ? A LYS 71 NZ 9 1 Y 0 A GLU 1012 ? CB ? A GLU 72 CB 10 1 Y 0 A GLU 1012 ? CG ? A GLU 72 CG 11 1 Y 0 A GLU 1012 ? CD ? A GLU 72 CD 12 1 Y 0 A GLU 1012 ? OE1 ? A GLU 72 OE1 13 1 Y 0 A GLU 1012 ? OE2 ? A GLU 72 OE2 14 1 Y 0 A LYS 1117 ? CG ? A LYS 177 CG 15 1 Y 0 A LYS 1117 ? CD ? A LYS 177 CD 16 1 Y 0 A LYS 1117 ? CE ? A LYS 177 CE 17 1 Y 0 A LYS 1117 ? NZ ? A LYS 177 NZ 18 1 Y 0 A LYS 1142 ? CD ? A LYS 202 CD 19 1 Y 0 A LYS 1142 ? CE ? A LYS 202 CE 20 1 Y 0 A LYS 1142 ? NZ ? A LYS 202 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 46 ? A GLY 1 2 1 Y 1 A GLY 92 ? A GLY 47 3 1 Y 1 A ALA 93 ? A ALA 48 4 1 Y 1 A PRO 94 ? A PRO 49 5 1 Y 1 A TRP 95 ? A TRP 50 6 1 Y 1 A ALA 96 ? A ALA 51 7 1 Y 1 A GLY 97 ? A GLY 52 8 1 Y 1 A GLY 98 ? A GLY 53 9 1 Y 1 A GLY 99 ? A GLY 54 10 1 Y 1 A GLY 100 ? A GLY 55 11 1 Y 1 A SER 101 ? A SER 56 12 1 Y 1 A GLY 102 ? A GLY 57 13 1 Y 1 A GLY 103 ? A GLY 58 14 1 Y 1 A GLY 104 ? A GLY 59 15 1 Y 1 A GLY 105 ? A GLY 60 16 1 Y 1 A GLY 1001 ? A GLY 61 17 1 Y 1 A PRO 1008 ? A PRO 68 18 1 Y 1 A ARG 1170 ? A ARG 230 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 EBN CBE C N N 89 EBN OBF O N N 90 EBN CBG C N N 91 EBN CBH C Y N 92 EBN CBI C Y N 93 EBN CBJ C Y N 94 EBN CBK C Y N 95 EBN CLL CL N N 96 EBN CBM C Y N 97 EBN CLN CL N N 98 EBN CBO C Y N 99 EBN NBD N N N 100 EBN CAX C N S 101 EBN CAV C N N 102 EBN OAW O N N 103 EBN CAY C N N 104 EBN CAZ C N N 105 EBN CBA C N N 106 EBN CBB C N N 107 EBN NBC N N N 108 EBN N N N N 109 EBN CA C N S 110 EBN C C N N 111 EBN O O N N 112 EBN CB C N N 113 EBN CG C N N 114 EBN CD C N N 115 EBN CE C N N 116 EBN NZ N N N 117 EBN CAA C N N 118 EBN CAB C N N 119 EBN NAC N N N 120 EBN CAD C N N 121 EBN NAE N N N 122 EBN NAF N N N 123 EBN CAG C N N 124 EBN CAH C N N 125 EBN CAI C N N 126 EBN CAJ C N N 127 EBN CAK C N N 128 EBN NAL N N N 129 EBN HBG H N N 130 EBN HBGA H N N 131 EBN HBI H N N 132 EBN HBJ H N N 133 EBN HBO H N N 134 EBN HNBD H N N 135 EBN HAX H N N 136 EBN HAY H N N 137 EBN HAYA H N N 138 EBN HAZ H N N 139 EBN HAZA H N N 140 EBN HBAA H N N 141 EBN HBAB H N N 142 EBN HBB H N N 143 EBN HBBA H N N 144 EBN HNBC H N N 145 EBN HNBA H N N 146 EBN HN H N N 147 EBN HA H N N 148 EBN HB H N N 149 EBN HBA H N N 150 EBN HG H N N 151 EBN HGA H N N 152 EBN HD H N N 153 EBN HDA H N N 154 EBN HE H N N 155 EBN HEA H N N 156 EBN HNZ H N N 157 EBN HNZA H N N 158 EBN HAA H N N 159 EBN HAAA H N N 160 EBN HAB H N N 161 EBN HNAC H N N 162 EBN HNAE H N N 163 EBN HNAA H N N 164 EBN HNAF H N N 165 EBN HAG H N N 166 EBN HAGA H N N 167 EBN HAH H N N 168 EBN HAHA H N N 169 EBN HAI H N N 170 EBN HAJ H N N 171 EBN HAJA H N N 172 EBN HAK H N N 173 EBN HAKA H N N 174 EBN HNAL H N N 175 GLN N N N N 176 GLN CA C N S 177 GLN C C N N 178 GLN O O N N 179 GLN CB C N N 180 GLN CG C N N 181 GLN CD C N N 182 GLN OE1 O N N 183 GLN NE2 N N N 184 GLN OXT O N N 185 GLN H H N N 186 GLN H2 H N N 187 GLN HA H N N 188 GLN HB2 H N N 189 GLN HB3 H N N 190 GLN HG2 H N N 191 GLN HG3 H N N 192 GLN HE21 H N N 193 GLN HE22 H N N 194 GLN HXT H N N 195 GLU N N N N 196 GLU CA C N S 197 GLU C C N N 198 GLU O O N N 199 GLU CB C N N 200 GLU CG C N N 201 GLU CD C N N 202 GLU OE1 O N N 203 GLU OE2 O N N 204 GLU OXT O N N 205 GLU H H N N 206 GLU H2 H N N 207 GLU HA H N N 208 GLU HB2 H N N 209 GLU HB3 H N N 210 GLU HG2 H N N 211 GLU HG3 H N N 212 GLU HE2 H N N 213 GLU HXT H N N 214 GLY N N N N 215 GLY CA C N N 216 GLY C C N N 217 GLY O O N N 218 GLY OXT O N N 219 GLY H H N N 220 GLY H2 H N N 221 GLY HA2 H N N 222 GLY HA3 H N N 223 GLY HXT H N N 224 HIS N N N N 225 HIS CA C N S 226 HIS C C N N 227 HIS O O N N 228 HIS CB C N N 229 HIS CG C Y N 230 HIS ND1 N Y N 231 HIS CD2 C Y N 232 HIS CE1 C Y N 233 HIS NE2 N Y N 234 HIS OXT O N N 235 HIS H H N N 236 HIS H2 H N N 237 HIS HA H N N 238 HIS HB2 H N N 239 HIS HB3 H N N 240 HIS HD1 H N N 241 HIS HD2 H N N 242 HIS HE1 H N N 243 HIS HE2 H N N 244 HIS HXT H N N 245 HOH O O N N 246 HOH H1 H N N 247 HOH H2 H N N 248 ILE N N N N 249 ILE CA C N S 250 ILE C C N N 251 ILE O O N N 252 ILE CB C N S 253 ILE CG1 C N N 254 ILE CG2 C N N 255 ILE CD1 C N N 256 ILE OXT O N N 257 ILE H H N N 258 ILE H2 H N N 259 ILE HA H N N 260 ILE HB H N N 261 ILE HG12 H N N 262 ILE HG13 H N N 263 ILE HG21 H N N 264 ILE HG22 H N N 265 ILE HG23 H N N 266 ILE HD11 H N N 267 ILE HD12 H N N 268 ILE HD13 H N N 269 ILE HXT H N N 270 LEU N N N N 271 LEU CA C N S 272 LEU C C N N 273 LEU O O N N 274 LEU CB C N N 275 LEU CG C N N 276 LEU CD1 C N N 277 LEU CD2 C N N 278 LEU OXT O N N 279 LEU H H N N 280 LEU H2 H N N 281 LEU HA H N N 282 LEU HB2 H N N 283 LEU HB3 H N N 284 LEU HG H N N 285 LEU HD11 H N N 286 LEU HD12 H N N 287 LEU HD13 H N N 288 LEU HD21 H N N 289 LEU HD22 H N N 290 LEU HD23 H N N 291 LEU HXT H N N 292 LYS N N N N 293 LYS CA C N S 294 LYS C C N N 295 LYS O O N N 296 LYS CB C N N 297 LYS CG C N N 298 LYS CD C N N 299 LYS CE C N N 300 LYS NZ N N N 301 LYS OXT O N N 302 LYS H H N N 303 LYS H2 H N N 304 LYS HA H N N 305 LYS HB2 H N N 306 LYS HB3 H N N 307 LYS HG2 H N N 308 LYS HG3 H N N 309 LYS HD2 H N N 310 LYS HD3 H N N 311 LYS HE2 H N N 312 LYS HE3 H N N 313 LYS HZ1 H N N 314 LYS HZ2 H N N 315 LYS HZ3 H N N 316 LYS HXT H N N 317 MET N N N N 318 MET CA C N S 319 MET C C N N 320 MET O O N N 321 MET CB C N N 322 MET CG C N N 323 MET SD S N N 324 MET CE C N N 325 MET OXT O N N 326 MET H H N N 327 MET H2 H N N 328 MET HA H N N 329 MET HB2 H N N 330 MET HB3 H N N 331 MET HG2 H N N 332 MET HG3 H N N 333 MET HE1 H N N 334 MET HE2 H N N 335 MET HE3 H N N 336 MET HXT H N N 337 NI NI NI N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PRO N N N N 362 PRO CA C N S 363 PRO C C N N 364 PRO O O N N 365 PRO CB C N N 366 PRO CG C N N 367 PRO CD C N N 368 PRO OXT O N N 369 PRO H H N N 370 PRO HA H N N 371 PRO HB2 H N N 372 PRO HB3 H N N 373 PRO HG2 H N N 374 PRO HG3 H N N 375 PRO HD2 H N N 376 PRO HD3 H N N 377 PRO HXT H N N 378 SER N N N N 379 SER CA C N S 380 SER C C N N 381 SER O O N N 382 SER CB C N N 383 SER OG O N N 384 SER OXT O N N 385 SER H H N N 386 SER H2 H N N 387 SER HA H N N 388 SER HB2 H N N 389 SER HB3 H N N 390 SER HG H N N 391 SER HXT H N N 392 THR N N N N 393 THR CA C N S 394 THR C C N N 395 THR O O N N 396 THR CB C N R 397 THR OG1 O N N 398 THR CG2 C N N 399 THR OXT O N N 400 THR H H N N 401 THR H2 H N N 402 THR HA H N N 403 THR HB H N N 404 THR HG1 H N N 405 THR HG21 H N N 406 THR HG22 H N N 407 THR HG23 H N N 408 THR HXT H N N 409 TRP N N N N 410 TRP CA C N S 411 TRP C C N N 412 TRP O O N N 413 TRP CB C N N 414 TRP CG C Y N 415 TRP CD1 C Y N 416 TRP CD2 C Y N 417 TRP NE1 N Y N 418 TRP CE2 C Y N 419 TRP CE3 C Y N 420 TRP CZ2 C Y N 421 TRP CZ3 C Y N 422 TRP CH2 C Y N 423 TRP OXT O N N 424 TRP H H N N 425 TRP H2 H N N 426 TRP HA H N N 427 TRP HB2 H N N 428 TRP HB3 H N N 429 TRP HD1 H N N 430 TRP HE1 H N N 431 TRP HE3 H N N 432 TRP HZ2 H N N 433 TRP HZ3 H N N 434 TRP HH2 H N N 435 TRP HXT H N N 436 TYR N N N N 437 TYR CA C N S 438 TYR C C N N 439 TYR O O N N 440 TYR CB C N N 441 TYR CG C Y N 442 TYR CD1 C Y N 443 TYR CD2 C Y N 444 TYR CE1 C Y N 445 TYR CE2 C Y N 446 TYR CZ C Y N 447 TYR OH O N N 448 TYR OXT O N N 449 TYR H H N N 450 TYR H2 H N N 451 TYR HA H N N 452 TYR HB2 H N N 453 TYR HB3 H N N 454 TYR HD1 H N N 455 TYR HD2 H N N 456 TYR HE1 H N N 457 TYR HE2 H N N 458 TYR HH H N N 459 TYR HXT H N N 460 VAL N N N N 461 VAL CA C N S 462 VAL C C N N 463 VAL O O N N 464 VAL CB C N N 465 VAL CG1 C N N 466 VAL CG2 C N N 467 VAL OXT O N N 468 VAL H H N N 469 VAL H2 H N N 470 VAL HA H N N 471 VAL HB H N N 472 VAL HG11 H N N 473 VAL HG12 H N N 474 VAL HG13 H N N 475 VAL HG21 H N N 476 VAL HG22 H N N 477 VAL HG23 H N N 478 VAL HXT H N N 479 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EBN NAL C sing N N 83 EBN CA C sing N N 84 EBN C O doub N N 85 EBN CAV N sing N N 86 EBN N CA sing N N 87 EBN N HN sing N N 88 EBN CA CB sing N N 89 EBN CA HA sing N N 90 EBN CG CB sing N N 91 EBN CB HB sing N N 92 EBN CB HBA sing N N 93 EBN CG CD sing N N 94 EBN CE CD sing N N 95 EBN CD HD sing N N 96 EBN CD HDA sing N N 97 EBN CE NZ sing N N 98 EBN CE HE sing N N 99 EBN CE HEA sing N N 100 EBN CG HG sing N N 101 EBN CG HGA sing N N 102 EBN NZ HNZ sing N N 103 EBN NZ HNZA sing N N 104 EBN CAB CAA sing N N 105 EBN CAA CAJ sing N N 106 EBN CAA HAA sing N N 107 EBN CAA HAAA sing N N 108 EBN NAC CAB sing N N 109 EBN CAB CAG sing N N 110 EBN CAB HAB sing N N 111 EBN CAD NAC sing N N 112 EBN NAC HNAC sing N N 113 EBN NAF CAD doub N N 114 EBN CAD NAE sing N N 115 EBN NAE HNAE sing N N 116 EBN NAE HNAA sing N N 117 EBN NAF HNAF sing N N 118 EBN CAG CAH sing N N 119 EBN CAG HAG sing N N 120 EBN CAG HAGA sing N N 121 EBN CAH CAI sing N N 122 EBN CAH HAH sing N N 123 EBN CAH HAHA sing N N 124 EBN CAJ CAI sing N N 125 EBN CAI CAK sing N N 126 EBN CAI HAI sing N N 127 EBN CAJ HAJ sing N N 128 EBN CAJ HAJA sing N N 129 EBN CAK NAL sing N N 130 EBN CAK HAK sing N N 131 EBN CAK HAKA sing N N 132 EBN NAL HNAL sing N N 133 EBN CAX CAV sing N N 134 EBN OAW CAV doub N N 135 EBN CAY CAX sing N N 136 EBN CAX NBD sing N N 137 EBN CAX HAX sing N N 138 EBN CAY CAZ sing N N 139 EBN CAY HAY sing N N 140 EBN CAY HAYA sing N N 141 EBN CBA CAZ sing N N 142 EBN CAZ HAZ sing N N 143 EBN CAZ HAZA sing N N 144 EBN CBB CBA sing N N 145 EBN CBA HBAA sing N N 146 EBN CBA HBAB sing N N 147 EBN CBB NBC sing N N 148 EBN CBB HBB sing N N 149 EBN CBB HBBA sing N N 150 EBN NBC HNBC sing N N 151 EBN NBC HNBA sing N N 152 EBN CBE NBD sing N N 153 EBN NBD HNBD sing N N 154 EBN OBF CBE doub N N 155 EBN CBE CBG sing N N 156 EBN CBG CBH sing N N 157 EBN CBG HBG sing N N 158 EBN CBG HBGA sing N N 159 EBN CBI CBH doub Y N 160 EBN CBH CBO sing Y N 161 EBN CBI CBJ sing Y N 162 EBN CBI HBI sing N N 163 EBN CBJ CBK doub Y N 164 EBN CBJ HBJ sing N N 165 EBN CBK CLL sing N N 166 EBN CBK CBM sing Y N 167 EBN CBO CBM doub Y N 168 EBN CBM CLN sing N N 169 EBN CBO HBO sing N N 170 GLN N CA sing N N 171 GLN N H sing N N 172 GLN N H2 sing N N 173 GLN CA C sing N N 174 GLN CA CB sing N N 175 GLN CA HA sing N N 176 GLN C O doub N N 177 GLN C OXT sing N N 178 GLN CB CG sing N N 179 GLN CB HB2 sing N N 180 GLN CB HB3 sing N N 181 GLN CG CD sing N N 182 GLN CG HG2 sing N N 183 GLN CG HG3 sing N N 184 GLN CD OE1 doub N N 185 GLN CD NE2 sing N N 186 GLN NE2 HE21 sing N N 187 GLN NE2 HE22 sing N N 188 GLN OXT HXT sing N N 189 GLU N CA sing N N 190 GLU N H sing N N 191 GLU N H2 sing N N 192 GLU CA C sing N N 193 GLU CA CB sing N N 194 GLU CA HA sing N N 195 GLU C O doub N N 196 GLU C OXT sing N N 197 GLU CB CG sing N N 198 GLU CB HB2 sing N N 199 GLU CB HB3 sing N N 200 GLU CG CD sing N N 201 GLU CG HG2 sing N N 202 GLU CG HG3 sing N N 203 GLU CD OE1 doub N N 204 GLU CD OE2 sing N N 205 GLU OE2 HE2 sing N N 206 GLU OXT HXT sing N N 207 GLY N CA sing N N 208 GLY N H sing N N 209 GLY N H2 sing N N 210 GLY CA C sing N N 211 GLY CA HA2 sing N N 212 GLY CA HA3 sing N N 213 GLY C O doub N N 214 GLY C OXT sing N N 215 GLY OXT HXT sing N N 216 HIS N CA sing N N 217 HIS N H sing N N 218 HIS N H2 sing N N 219 HIS CA C sing N N 220 HIS CA CB sing N N 221 HIS CA HA sing N N 222 HIS C O doub N N 223 HIS C OXT sing N N 224 HIS CB CG sing N N 225 HIS CB HB2 sing N N 226 HIS CB HB3 sing N N 227 HIS CG ND1 sing Y N 228 HIS CG CD2 doub Y N 229 HIS ND1 CE1 doub Y N 230 HIS ND1 HD1 sing N N 231 HIS CD2 NE2 sing Y N 232 HIS CD2 HD2 sing N N 233 HIS CE1 NE2 sing Y N 234 HIS CE1 HE1 sing N N 235 HIS NE2 HE2 sing N N 236 HIS OXT HXT sing N N 237 HOH O H1 sing N N 238 HOH O H2 sing N N 239 ILE N CA sing N N 240 ILE N H sing N N 241 ILE N H2 sing N N 242 ILE CA C sing N N 243 ILE CA CB sing N N 244 ILE CA HA sing N N 245 ILE C O doub N N 246 ILE C OXT sing N N 247 ILE CB CG1 sing N N 248 ILE CB CG2 sing N N 249 ILE CB HB sing N N 250 ILE CG1 CD1 sing N N 251 ILE CG1 HG12 sing N N 252 ILE CG1 HG13 sing N N 253 ILE CG2 HG21 sing N N 254 ILE CG2 HG22 sing N N 255 ILE CG2 HG23 sing N N 256 ILE CD1 HD11 sing N N 257 ILE CD1 HD12 sing N N 258 ILE CD1 HD13 sing N N 259 ILE OXT HXT sing N N 260 LEU N CA sing N N 261 LEU N H sing N N 262 LEU N H2 sing N N 263 LEU CA C sing N N 264 LEU CA CB sing N N 265 LEU CA HA sing N N 266 LEU C O doub N N 267 LEU C OXT sing N N 268 LEU CB CG sing N N 269 LEU CB HB2 sing N N 270 LEU CB HB3 sing N N 271 LEU CG CD1 sing N N 272 LEU CG CD2 sing N N 273 LEU CG HG sing N N 274 LEU CD1 HD11 sing N N 275 LEU CD1 HD12 sing N N 276 LEU CD1 HD13 sing N N 277 LEU CD2 HD21 sing N N 278 LEU CD2 HD22 sing N N 279 LEU CD2 HD23 sing N N 280 LEU OXT HXT sing N N 281 LYS N CA sing N N 282 LYS N H sing N N 283 LYS N H2 sing N N 284 LYS CA C sing N N 285 LYS CA CB sing N N 286 LYS CA HA sing N N 287 LYS C O doub N N 288 LYS C OXT sing N N 289 LYS CB CG sing N N 290 LYS CB HB2 sing N N 291 LYS CB HB3 sing N N 292 LYS CG CD sing N N 293 LYS CG HG2 sing N N 294 LYS CG HG3 sing N N 295 LYS CD CE sing N N 296 LYS CD HD2 sing N N 297 LYS CD HD3 sing N N 298 LYS CE NZ sing N N 299 LYS CE HE2 sing N N 300 LYS CE HE3 sing N N 301 LYS NZ HZ1 sing N N 302 LYS NZ HZ2 sing N N 303 LYS NZ HZ3 sing N N 304 LYS OXT HXT sing N N 305 MET N CA sing N N 306 MET N H sing N N 307 MET N H2 sing N N 308 MET CA C sing N N 309 MET CA CB sing N N 310 MET CA HA sing N N 311 MET C O doub N N 312 MET C OXT sing N N 313 MET CB CG sing N N 314 MET CB HB2 sing N N 315 MET CB HB3 sing N N 316 MET CG SD sing N N 317 MET CG HG2 sing N N 318 MET CG HG3 sing N N 319 MET SD CE sing N N 320 MET CE HE1 sing N N 321 MET CE HE2 sing N N 322 MET CE HE3 sing N N 323 MET OXT HXT sing N N 324 PHE N CA sing N N 325 PHE N H sing N N 326 PHE N H2 sing N N 327 PHE CA C sing N N 328 PHE CA CB sing N N 329 PHE CA HA sing N N 330 PHE C O doub N N 331 PHE C OXT sing N N 332 PHE CB CG sing N N 333 PHE CB HB2 sing N N 334 PHE CB HB3 sing N N 335 PHE CG CD1 doub Y N 336 PHE CG CD2 sing Y N 337 PHE CD1 CE1 sing Y N 338 PHE CD1 HD1 sing N N 339 PHE CD2 CE2 doub Y N 340 PHE CD2 HD2 sing N N 341 PHE CE1 CZ doub Y N 342 PHE CE1 HE1 sing N N 343 PHE CE2 CZ sing Y N 344 PHE CE2 HE2 sing N N 345 PHE CZ HZ sing N N 346 PHE OXT HXT sing N N 347 PRO N CA sing N N 348 PRO N CD sing N N 349 PRO N H sing N N 350 PRO CA C sing N N 351 PRO CA CB sing N N 352 PRO CA HA sing N N 353 PRO C O doub N N 354 PRO C OXT sing N N 355 PRO CB CG sing N N 356 PRO CB HB2 sing N N 357 PRO CB HB3 sing N N 358 PRO CG CD sing N N 359 PRO CG HG2 sing N N 360 PRO CG HG3 sing N N 361 PRO CD HD2 sing N N 362 PRO CD HD3 sing N N 363 PRO OXT HXT sing N N 364 SER N CA sing N N 365 SER N H sing N N 366 SER N H2 sing N N 367 SER CA C sing N N 368 SER CA CB sing N N 369 SER CA HA sing N N 370 SER C O doub N N 371 SER C OXT sing N N 372 SER CB OG sing N N 373 SER CB HB2 sing N N 374 SER CB HB3 sing N N 375 SER OG HG sing N N 376 SER OXT HXT sing N N 377 THR N CA sing N N 378 THR N H sing N N 379 THR N H2 sing N N 380 THR CA C sing N N 381 THR CA CB sing N N 382 THR CA HA sing N N 383 THR C O doub N N 384 THR C OXT sing N N 385 THR CB OG1 sing N N 386 THR CB CG2 sing N N 387 THR CB HB sing N N 388 THR OG1 HG1 sing N N 389 THR CG2 HG21 sing N N 390 THR CG2 HG22 sing N N 391 THR CG2 HG23 sing N N 392 THR OXT HXT sing N N 393 TRP N CA sing N N 394 TRP N H sing N N 395 TRP N H2 sing N N 396 TRP CA C sing N N 397 TRP CA CB sing N N 398 TRP CA HA sing N N 399 TRP C O doub N N 400 TRP C OXT sing N N 401 TRP CB CG sing N N 402 TRP CB HB2 sing N N 403 TRP CB HB3 sing N N 404 TRP CG CD1 doub Y N 405 TRP CG CD2 sing Y N 406 TRP CD1 NE1 sing Y N 407 TRP CD1 HD1 sing N N 408 TRP CD2 CE2 doub Y N 409 TRP CD2 CE3 sing Y N 410 TRP NE1 CE2 sing Y N 411 TRP NE1 HE1 sing N N 412 TRP CE2 CZ2 sing Y N 413 TRP CE3 CZ3 doub Y N 414 TRP CE3 HE3 sing N N 415 TRP CZ2 CH2 doub Y N 416 TRP CZ2 HZ2 sing N N 417 TRP CZ3 CH2 sing Y N 418 TRP CZ3 HZ3 sing N N 419 TRP CH2 HH2 sing N N 420 TRP OXT HXT sing N N 421 TYR N CA sing N N 422 TYR N H sing N N 423 TYR N H2 sing N N 424 TYR CA C sing N N 425 TYR CA CB sing N N 426 TYR CA HA sing N N 427 TYR C O doub N N 428 TYR C OXT sing N N 429 TYR CB CG sing N N 430 TYR CB HB2 sing N N 431 TYR CB HB3 sing N N 432 TYR CG CD1 doub Y N 433 TYR CG CD2 sing Y N 434 TYR CD1 CE1 sing Y N 435 TYR CD1 HD1 sing N N 436 TYR CD2 CE2 doub Y N 437 TYR CD2 HD2 sing N N 438 TYR CE1 CZ doub Y N 439 TYR CE1 HE1 sing N N 440 TYR CE2 CZ sing Y N 441 TYR CE2 HE2 sing N N 442 TYR CZ OH sing N N 443 TYR OH HH sing N N 444 TYR OXT HXT sing N N 445 VAL N CA sing N N 446 VAL N H sing N N 447 VAL N H2 sing N N 448 VAL CA C sing N N 449 VAL CA CB sing N N 450 VAL CA HA sing N N 451 VAL C O doub N N 452 VAL C OXT sing N N 453 VAL CB CG1 sing N N 454 VAL CB CG2 sing N N 455 VAL CB HB sing N N 456 VAL CG1 HG11 sing N N 457 VAL CG1 HG12 sing N N 458 VAL CG1 HG13 sing N N 459 VAL CG2 HG21 sing N N 460 VAL CG2 HG22 sing N N 461 VAL CG2 HG23 sing N N 462 VAL OXT HXT sing N N 463 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 ;(S)-6-amino-N-((S)-6-amino-1-(((1r,4S)-4-guanidinocyclohexyl)methylamino)-1-oxohexan-2-yl)-2-(2-(3,4-dichlorophenyl)acetamido)hexanamide ; EBN 4 'NICKEL (II) ION' NI 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FP7 _pdbx_initial_refinement_model.details 'PDB ENTRY 2FP7' #