data_2YRA # _entry.id 2YRA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YRA pdb_00002yra 10.2210/pdb2yra/pdb RCSB RCSB027034 ? ? WWPDB D_1000027034 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002100904.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YRA _pdbx_database_status.recvd_initial_deposition_date 2007-04-02 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagashima, T.' 1 'Hayashi, F.' 2 'Yokoyama, S.' 3 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 4 # _citation.id primary _citation.title 'Solution structure of the zinc finger domains (1-87) from human F-box only protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagashima, T.' 1 ? primary 'Hayashi, F.' 2 ? primary 'Yokoyama, S.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Seizure 6-like protein isoform 3' _entity.formula_weight 7908.438 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CCP domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSSGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKTEESGPSSG _entity_poly.pdbx_seq_one_letter_code_can GSSGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKTEESGPSSG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002100904.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 CYS n 1 9 SER n 1 10 ASP n 1 11 LEU n 1 12 PRO n 1 13 GLU n 1 14 ILE n 1 15 GLN n 1 16 ASN n 1 17 GLY n 1 18 TRP n 1 19 LYS n 1 20 THR n 1 21 THR n 1 22 SER n 1 23 HIS n 1 24 THR n 1 25 GLU n 1 26 LEU n 1 27 VAL n 1 28 ARG n 1 29 GLY n 1 30 ALA n 1 31 ARG n 1 32 ILE n 1 33 THR n 1 34 TYR n 1 35 GLN n 1 36 CYS n 1 37 ASP n 1 38 PRO n 1 39 GLY n 1 40 TYR n 1 41 ASP n 1 42 ILE n 1 43 VAL n 1 44 GLY n 1 45 SER n 1 46 ASP n 1 47 THR n 1 48 LEU n 1 49 THR n 1 50 CYS n 1 51 GLN n 1 52 TRP n 1 53 ASP n 1 54 LEU n 1 55 SER n 1 56 TRP n 1 57 SER n 1 58 SER n 1 59 ASP n 1 60 PRO n 1 61 PRO n 1 62 PHE n 1 63 CYS n 1 64 GLU n 1 65 LYS n 1 66 THR n 1 67 GLU n 1 68 GLU n 1 69 SER n 1 70 GLY n 1 71 PRO n 1 72 SER n 1 73 SER n 1 74 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050919-01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SEZ6L_HUMAN _struct_ref.pdbx_db_accession Q9BYH1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKTEE _struct_ref.pdbx_align_begin 745 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YRA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 68 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9BYH1 _struct_ref_seq.db_align_beg 745 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 805 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 745 _struct_ref_seq.pdbx_auth_seq_align_end 805 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YRA GLY A 1 ? UNP Q9BYH1 ? ? 'expression tag' 738 1 1 2YRA SER A 2 ? UNP Q9BYH1 ? ? 'expression tag' 739 2 1 2YRA SER A 3 ? UNP Q9BYH1 ? ? 'expression tag' 740 3 1 2YRA GLY A 4 ? UNP Q9BYH1 ? ? 'expression tag' 741 4 1 2YRA SER A 5 ? UNP Q9BYH1 ? ? 'expression tag' 742 5 1 2YRA SER A 6 ? UNP Q9BYH1 ? ? 'expression tag' 743 6 1 2YRA GLY A 7 ? UNP Q9BYH1 ? ? 'expression tag' 744 7 1 2YRA SER A 69 ? UNP Q9BYH1 ? ? 'expression tag' 806 8 1 2YRA GLY A 70 ? UNP Q9BYH1 ? ? 'expression tag' 807 9 1 2YRA PRO A 71 ? UNP Q9BYH1 ? ? 'expression tag' 808 10 1 2YRA SER A 72 ? UNP Q9BYH1 ? ? 'expression tag' 809 11 1 2YRA SER A 73 ? UNP Q9BYH1 ? ? 'expression tag' 810 12 1 2YRA GLY A 74 ? UNP Q9BYH1 ? ? 'expression tag' 811 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.77mM uniformly 13C, 15N-labeled protein; 20mM TrisHCl, 100mM NaCl, 1mM DTT, 0.02% NaN3, 10% D2O, 90% H2O' _pdbx_nmr_sample_details.solvent_system '10% D2O / 90% H2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2YRA _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2YRA _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2YRA _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20020425 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9822 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2YRA _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2YRA _struct.title 'Solution structure of the zinc finger domains (1-87) from human F-box only protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YRA _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;disulfide bond, sushi domain, SCR, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 50 SG ? ? A CYS 745 A CYS 787 1_555 ? ? ? ? ? ? ? 2.015 ? ? disulf2 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 63 SG ? ? A CYS 773 A CYS 800 1_555 ? ? ? ? ? ? ? 2.085 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 17 ? LYS A 19 ? GLY A 754 LYS A 756 A 2 ARG A 31 ? CYS A 36 ? ARG A 768 CYS A 773 A 3 THR A 47 ? THR A 49 ? THR A 784 THR A 786 B 1 TYR A 40 ? VAL A 43 ? TYR A 777 VAL A 780 B 2 PHE A 62 ? LYS A 65 ? PHE A 799 LYS A 802 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 18 ? N TRP A 755 O GLN A 35 ? O GLN A 772 A 2 3 N ILE A 32 ? N ILE A 769 O LEU A 48 ? O LEU A 785 B 1 2 N ASP A 41 ? N ASP A 778 O GLU A 64 ? O GLU A 801 # _database_PDB_matrix.entry_id 2YRA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YRA _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 738 738 GLY GLY A . n A 1 2 SER 2 739 739 SER SER A . n A 1 3 SER 3 740 740 SER SER A . n A 1 4 GLY 4 741 741 GLY GLY A . n A 1 5 SER 5 742 742 SER SER A . n A 1 6 SER 6 743 743 SER SER A . n A 1 7 GLY 7 744 744 GLY GLY A . n A 1 8 CYS 8 745 745 CYS CYS A . n A 1 9 SER 9 746 746 SER SER A . n A 1 10 ASP 10 747 747 ASP ASP A . n A 1 11 LEU 11 748 748 LEU LEU A . n A 1 12 PRO 12 749 749 PRO PRO A . n A 1 13 GLU 13 750 750 GLU GLU A . n A 1 14 ILE 14 751 751 ILE ILE A . n A 1 15 GLN 15 752 752 GLN GLN A . n A 1 16 ASN 16 753 753 ASN ASN A . n A 1 17 GLY 17 754 754 GLY GLY A . n A 1 18 TRP 18 755 755 TRP TRP A . n A 1 19 LYS 19 756 756 LYS LYS A . n A 1 20 THR 20 757 757 THR THR A . n A 1 21 THR 21 758 758 THR THR A . n A 1 22 SER 22 759 759 SER SER A . n A 1 23 HIS 23 760 760 HIS HIS A . n A 1 24 THR 24 761 761 THR THR A . n A 1 25 GLU 25 762 762 GLU GLU A . n A 1 26 LEU 26 763 763 LEU LEU A . n A 1 27 VAL 27 764 764 VAL VAL A . n A 1 28 ARG 28 765 765 ARG ARG A . n A 1 29 GLY 29 766 766 GLY GLY A . n A 1 30 ALA 30 767 767 ALA ALA A . n A 1 31 ARG 31 768 768 ARG ARG A . n A 1 32 ILE 32 769 769 ILE ILE A . n A 1 33 THR 33 770 770 THR THR A . n A 1 34 TYR 34 771 771 TYR TYR A . n A 1 35 GLN 35 772 772 GLN GLN A . n A 1 36 CYS 36 773 773 CYS CYS A . n A 1 37 ASP 37 774 774 ASP ASP A . n A 1 38 PRO 38 775 775 PRO PRO A . n A 1 39 GLY 39 776 776 GLY GLY A . n A 1 40 TYR 40 777 777 TYR TYR A . n A 1 41 ASP 41 778 778 ASP ASP A . n A 1 42 ILE 42 779 779 ILE ILE A . n A 1 43 VAL 43 780 780 VAL VAL A . n A 1 44 GLY 44 781 781 GLY GLY A . n A 1 45 SER 45 782 782 SER SER A . n A 1 46 ASP 46 783 783 ASP ASP A . n A 1 47 THR 47 784 784 THR THR A . n A 1 48 LEU 48 785 785 LEU LEU A . n A 1 49 THR 49 786 786 THR THR A . n A 1 50 CYS 50 787 787 CYS CYS A . n A 1 51 GLN 51 788 788 GLN GLN A . n A 1 52 TRP 52 789 789 TRP TRP A . n A 1 53 ASP 53 790 790 ASP ASP A . n A 1 54 LEU 54 791 791 LEU LEU A . n A 1 55 SER 55 792 792 SER SER A . n A 1 56 TRP 56 793 793 TRP TRP A . n A 1 57 SER 57 794 794 SER SER A . n A 1 58 SER 58 795 795 SER SER A . n A 1 59 ASP 59 796 796 ASP ASP A . n A 1 60 PRO 60 797 797 PRO PRO A . n A 1 61 PRO 61 798 798 PRO PRO A . n A 1 62 PHE 62 799 799 PHE PHE A . n A 1 63 CYS 63 800 800 CYS CYS A . n A 1 64 GLU 64 801 801 GLU GLU A . n A 1 65 LYS 65 802 802 LYS LYS A . n A 1 66 THR 66 803 803 THR THR A . n A 1 67 GLU 67 804 804 GLU GLU A . n A 1 68 GLU 68 805 805 GLU GLU A . n A 1 69 SER 69 806 806 SER SER A . n A 1 70 GLY 70 807 807 GLY GLY A . n A 1 71 PRO 71 808 808 PRO PRO A . n A 1 72 SER 72 809 809 SER SER A . n A 1 73 SER 73 810 810 SER SER A . n A 1 74 GLY 74 811 811 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE The sequence database is Q9BYH1-4, isoform 3. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 745 ? ? -46.76 170.29 2 1 PRO A 798 ? ? -69.85 -165.28 3 1 GLU A 804 ? ? -68.87 89.03 4 2 SER A 740 ? ? -83.94 41.50 5 2 CYS A 745 ? ? -44.86 150.56 6 2 LEU A 763 ? ? -69.47 75.96 7 2 GLN A 788 ? ? -61.50 -176.75 8 2 PRO A 798 ? ? -69.79 -167.50 9 3 THR A 757 ? ? -161.14 119.66 10 3 SER A 759 ? ? -92.96 47.03 11 3 LEU A 763 ? ? -59.17 102.18 12 3 LEU A 791 ? ? 45.38 24.98 13 3 ASP A 796 ? ? -46.43 154.54 14 3 SER A 809 ? ? -54.20 87.36 15 4 ASP A 747 ? ? -38.27 150.13 16 4 SER A 759 ? ? -106.31 42.98 17 4 LEU A 763 ? ? -62.71 74.86 18 4 ARG A 765 ? ? -34.73 139.52 19 4 SER A 795 ? ? -175.06 -178.72 20 4 PRO A 798 ? ? -69.79 -164.73 21 4 GLU A 804 ? ? -83.34 42.03 22 4 PRO A 808 ? ? -69.77 -179.12 23 5 CYS A 745 ? ? -37.51 152.11 24 5 LEU A 763 ? ? -54.92 101.53 25 5 ASP A 796 ? ? -44.93 151.04 26 5 PRO A 798 ? ? -69.74 -163.87 27 5 THR A 803 ? ? -39.92 144.21 28 5 GLU A 805 ? ? -90.90 58.07 29 6 CYS A 745 ? ? -40.23 152.91 30 6 PRO A 749 ? ? -69.77 -174.09 31 6 LEU A 763 ? ? -64.41 82.04 32 6 ALA A 767 ? ? -46.77 157.58 33 6 PRO A 798 ? ? -69.70 -175.25 34 7 SER A 742 ? ? -172.00 121.43 35 7 SER A 743 ? ? -93.35 30.98 36 7 LEU A 763 ? ? 33.27 53.56 37 7 ARG A 765 ? ? -36.54 137.82 38 7 ASP A 796 ? ? -37.84 153.53 39 7 PRO A 798 ? ? -69.76 -164.91 40 8 HIS A 760 ? ? -41.06 157.47 41 8 THR A 761 ? ? -54.78 -178.65 42 8 GLU A 762 ? ? -42.10 161.08 43 8 LEU A 763 ? ? -53.73 100.55 44 8 ARG A 765 ? ? -52.78 108.11 45 8 PRO A 775 ? ? -69.68 96.03 46 8 PRO A 798 ? ? -69.75 -164.19 47 8 SER A 806 ? ? -43.87 163.37 48 9 ASP A 747 ? ? -48.86 155.45 49 9 SER A 759 ? ? -84.41 43.81 50 9 GLU A 762 ? ? -35.03 136.32 51 9 LEU A 763 ? ? -48.76 99.38 52 9 PRO A 798 ? ? -69.73 -168.15 53 10 CYS A 745 ? ? -47.72 154.25 54 10 PRO A 749 ? ? -69.74 -179.78 55 10 SER A 759 ? ? -121.77 -67.27 56 10 ASP A 796 ? ? -43.79 152.15 57 10 PRO A 798 ? ? -69.80 -167.55 58 10 GLU A 805 ? ? 39.98 49.01 59 11 CYS A 745 ? ? -45.16 163.86 60 11 LEU A 763 ? ? -58.87 101.48 61 11 SER A 795 ? ? -172.29 -175.96 62 11 PRO A 798 ? ? -69.81 -176.76 63 11 PRO A 808 ? ? -69.78 97.34 64 12 PRO A 798 ? ? -69.74 -166.99 65 13 CYS A 745 ? ? -44.84 154.89 66 13 PRO A 749 ? ? -69.73 -177.43 67 13 THR A 761 ? ? 37.29 31.26 68 13 PRO A 798 ? ? -69.71 -164.28 69 13 PRO A 808 ? ? -69.72 -176.41 70 14 CYS A 745 ? ? -57.90 171.37 71 14 PRO A 798 ? ? -69.70 -167.11 72 14 GLU A 805 ? ? -94.27 -63.30 73 15 CYS A 745 ? ? -48.09 158.37 74 15 ASP A 747 ? ? -48.41 159.46 75 15 GLU A 750 ? ? -46.81 156.68 76 15 GLN A 788 ? ? -57.79 -179.18 77 15 ASP A 796 ? ? -44.60 152.96 78 15 PRO A 798 ? ? -69.71 -169.31 79 16 SER A 739 ? ? -69.50 88.35 80 16 CYS A 745 ? ? -40.54 154.09 81 16 ASN A 753 ? ? 70.08 41.68 82 16 SER A 759 ? ? -100.22 -66.60 83 16 LEU A 763 ? ? -64.97 74.27 84 16 PRO A 798 ? ? -69.79 -164.07 85 16 GLU A 805 ? ? -123.57 -54.00 86 17 CYS A 745 ? ? -40.55 155.12 87 17 HIS A 760 ? ? -54.60 101.19 88 17 LEU A 763 ? ? -58.16 94.20 89 17 ALA A 767 ? ? -38.02 131.80 90 17 PRO A 775 ? ? -69.69 93.97 91 17 ASP A 796 ? ? -46.40 158.97 92 17 PRO A 798 ? ? -69.74 -169.77 93 18 CYS A 745 ? ? -45.39 152.22 94 18 THR A 758 ? ? -57.13 102.81 95 18 GLN A 788 ? ? -61.15 -179.95 96 18 ASP A 796 ? ? -47.21 153.14 97 18 PRO A 798 ? ? -69.71 -167.77 98 18 GLU A 804 ? ? -42.26 161.95 99 18 PRO A 808 ? ? -69.73 87.66 100 19 SER A 742 ? ? -132.91 -45.07 101 19 CYS A 745 ? ? -48.80 152.63 102 19 LEU A 763 ? ? -84.28 46.76 103 19 LEU A 791 ? ? 48.08 25.76 104 19 ASP A 796 ? ? -39.12 151.54 105 20 CYS A 745 ? ? -48.29 171.32 106 20 LEU A 763 ? ? -67.79 93.69 107 20 ASP A 796 ? ? -47.56 150.60 108 20 PRO A 798 ? ? -69.83 -171.79 #