data_3A0M # _entry.id 3A0M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3A0M pdb_00003a0m 10.2210/pdb3a0m/pdb RCSB RCSB028661 ? ? WWPDB D_1000028661 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3A08 'The similar host-guest peptide' unspecified PDB 3A0A 'The similar host-guest peptide' unspecified PDB 2CUO 'The similar collagen-like peptide' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3A0M _pdbx_database_status.recvd_initial_deposition_date 2009-03-21 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Okuyama, K.' 1 'Morimoto, T.' 2 'Mizuno, K.' 3 'Bachinger, H.P.' 4 # _citation.id primary _citation.title 'Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.' _citation.journal_abbrev Biopolymers _citation.journal_volume 95 _citation.page_first 628 _citation.page_last 640 _citation.year 2011 _citation.journal_id_ASTM BIPMAA _citation.country US _citation.journal_id_ISSN 0006-3525 _citation.journal_id_CSD 0161 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21442606 _citation.pdbx_database_id_DOI 10.1002/bip.21625 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Okuyama, K.' 1 ? primary 'Miyama, K.' 2 ? primary 'Morimoto, T.' 3 ? primary 'Masakiyo, K.' 4 ? primary 'Mizuno, K.' 5 ? primary 'Bachinger, H.P.' 6 ? # _cell.entry_id 3A0M _cell.length_a 26.124 _cell.length_b 26.366 _cell.length_c 79.939 _cell.angle_alpha 90.00 _cell.angle_beta 90.08 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3A0M _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'collagen-like peptide' 2297.563 6 ? ? ? ? 2 water nat water 18.015 280 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'PPGPPGPPGPPG(HYP)VGPPGPPGPPGPPG' _entity_poly.pdbx_seq_one_letter_code_can PPGPPGPPGPPGPVGPPGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 PRO n 1 3 GLY n 1 4 PRO n 1 5 PRO n 1 6 GLY n 1 7 PRO n 1 8 PRO n 1 9 GLY n 1 10 PRO n 1 11 PRO n 1 12 GLY n 1 13 HYP y 1 13 PRO y 1 14 VAL y 1 14 PRO y 1 15 GLY n 1 16 PRO y 1 16 HYP y 1 17 PRO y 1 17 VAL y 1 18 GLY n 1 19 PRO n 1 20 PRO n 1 21 GLY n 1 22 PRO n 1 23 PRO n 1 24 GLY n 1 25 PRO n 1 26 PRO n 1 27 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'THIS PEPTIDE WAS CHEMICALLY SYSTHESIZED.' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3A0M _struct_ref.pdbx_db_accession 3A0M _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3A0M A 1 ? 27 ? 3A0M 1 ? 27 ? 1 27 2 1 3A0M B 1 ? 27 ? 3A0M 1 ? 27 ? 1 27 3 1 3A0M C 1 ? 27 ? 3A0M 1 ? 27 ? 1 27 4 1 3A0M D 1 ? 27 ? 3A0M 1 ? 27 ? 1 27 5 1 3A0M E 1 ? 27 ? 3A0M 1 ? 27 ? 1 27 6 1 3A0M F 1 ? 27 ? 3A0M 1 ? 27 ? 1 27 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 6 3A0M PRO F 13 ? PDB 3A0M HYP 13 microheterogeneity 13 1 6 3A0M PRO F 14 ? PDB 3A0M VAL 14 microheterogeneity 14 2 6 3A0M HYP F 16 ? PDB 3A0M PRO 16 microheterogeneity 16 3 6 3A0M VAL F 17 ? PDB 3A0M PRO 17 microheterogeneity 17 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3A0M _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.86 _exptl_crystal.density_percent_sol 38.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '11.3%(W/V) PEG 2000, 0.05M ACETATE BUFFER, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'Bruker DIP-6040' _diffrn_detector.pdbx_collection_date 2007-03-13 _diffrn_detector.details 'double-crystal monochromator & horizontal focusing mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.70 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.70 # _reflns.entry_id 3A0M _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 0.98 _reflns.d_resolution_low 24.8 _reflns.number_all ? _reflns.number_obs 60025 _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 0.98 _reflns_shell.d_res_low 1.02 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.35 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 6010 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3A0M _refine.ls_number_reflns_obs 51506 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.8 _refine.ls_d_res_high 1.02 _refine.ls_percent_reflns_obs 92.1 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1161 _refine.ls_R_factor_R_free 0.1429 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 2698 _refine.ls_number_parameters 10851 _refine.ls_number_restraints 13920 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'THE STRUCTURE WAS REFINED UNDER THE TWINNING OPERATOR (H,-K,-L) AND THE TWINNING FRACTION 0.395 USING THE TWINNED DATA.' _refine.pdbx_starting_model 'PDB entry 2CUO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model anisotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3A0M _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 10 _refine_analyze.occupancy_sum_hydrogen 847.00 _refine_analyze.occupancy_sum_non_hydrogen 1173.61 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 925 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 280 _refine_hist.number_atoms_total 1205 _refine_hist.d_res_high 1.02 _refine_hist.d_res_low 24.8 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.029 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0321 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.087 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.064 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.017 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.043 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.087 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 6 1.02 1.06 . 0.178 . . . . . . . 5287 . 'X-RAY DIFFRACTION' 6 1.06 1.10 . 0.156 . . . . . . . 5135 . 'X-RAY DIFFRACTION' 6 1.10 1.15 . 0.130 . . . . . . . 5204 . 'X-RAY DIFFRACTION' 6 1.15 1.21 . 0.114 . . . . . . . 5160 . 'X-RAY DIFFRACTION' 6 1.21 1.29 . 0.111 . . . . . . . 5074 . 'X-RAY DIFFRACTION' 6 1.29 1.38 . 0.103 . . . . . . . 5162 . 'X-RAY DIFFRACTION' # _pdbx_refine.entry_id 3A0M _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.1161 _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.1084 _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 46193 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 3A0M _struct.title 'Structure of (PPG)4-OVG-(PPG)4, monoclinic, twinned crystal' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3A0M _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'collagen, triple-helix, model peptide, twinned crystal, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 12 C ? ? ? 1_555 A HYP 13 N ? ? A GLY 12 A HYP 13 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale2 covale both ? A HYP 13 C ? ? ? 1_555 A VAL 14 N ? ? A HYP 13 A VAL 14 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale3 covale both ? B GLY 12 C ? ? ? 1_555 B HYP 13 N ? ? B GLY 12 B HYP 13 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? B HYP 13 C ? ? ? 1_555 B VAL 14 N ? ? B HYP 13 B VAL 14 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? C GLY 12 C ? ? ? 1_555 C HYP 13 N ? ? C GLY 12 C HYP 13 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale6 covale both ? C HYP 13 C ? ? ? 1_555 C VAL 14 N ? ? C HYP 13 C VAL 14 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? D GLY 12 C ? ? ? 1_555 D HYP 13 N ? ? D GLY 12 D HYP 13 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale8 covale both ? D HYP 13 C ? ? ? 1_555 D VAL 14 N ? ? D HYP 13 D VAL 14 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale9 covale both ? E GLY 12 C ? ? ? 1_555 E HYP 13 N ? ? E GLY 12 E HYP 13 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale10 covale both ? E HYP 13 C ? ? ? 1_555 E VAL 14 N ? ? E HYP 13 E VAL 14 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale11 covale both ? F GLY 12 C ? ? ? 1_555 F HYP 13 N A ? F GLY 12 F HYP 13 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? F HYP 13 C A ? ? 1_555 F VAL 14 N A ? F HYP 13 F VAL 14 1_555 ? ? ? ? ? ? ? 1.312 ? ? covale13 covale both ? F GLY 15 C B ? ? 1_555 F HYP 16 N B ? F GLY 15 F HYP 16 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale14 covale both ? F HYP 16 C B ? ? 1_555 F VAL 17 N B ? F HYP 16 F VAL 17 1_555 ? ? ? ? ? ? ? 1.309 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id F _struct_site.pdbx_auth_comp_id PRO _struct_site.pdbx_auth_seq_id 16 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE PRO F 16' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 GLY D 15 ? GLY D 15 . ? 1_555 ? 2 AC1 10 VAL E 14 ? VAL E 14 . ? 1_555 ? 3 AC1 10 GLY E 15 ? GLY E 15 . ? 1_555 ? 4 AC1 10 GLY F 15 ? GLY F 15 . ? 1_555 ? 5 AC1 10 PRO F 16 ? PRO F 16 . ? 1_555 ? 6 AC1 10 PRO F 17 ? PRO F 17 . ? 1_555 ? 7 AC1 10 GLY F 18 ? GLY F 18 . ? 1_555 ? 8 AC1 10 HOH L . ? HOH F 266 . ? 1_555 ? 9 AC1 10 HOH L . ? HOH F 339 . ? 1_555 ? 10 AC1 10 HOH L . ? HOH F 353 . ? 1_555 ? # _database_PDB_matrix.entry_id 3A0M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3A0M _atom_sites.fract_transf_matrix[1][1] 0.038279 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000053 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.037928 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012510 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 HYP 13 13 13 HYP HYP A . y A 1 14 VAL 14 14 14 VAL VAL A . y A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 PRO 16 16 16 PRO PRO A . y A 1 17 PRO 17 17 17 PRO PRO A . y A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 GLY 27 27 ? ? ? A . n B 1 1 PRO 1 1 ? ? ? B . n B 1 2 PRO 2 2 ? ? ? B . n B 1 3 GLY 3 3 ? ? ? B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 PRO 5 5 5 PRO PRO B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 PRO 8 8 8 PRO PRO B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 HYP 13 13 13 HYP HYP B . y B 1 14 VAL 14 14 14 VAL VAL B . y B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 PRO 16 16 16 PRO PRO B . y B 1 17 PRO 17 17 17 PRO PRO B . y B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 PRO 20 20 20 PRO PRO B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 PRO 23 23 23 PRO PRO B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 PRO 25 25 25 PRO PRO B . n B 1 26 PRO 26 26 26 PRO PRO B . n B 1 27 GLY 27 27 27 GLY GLY B . n C 1 1 PRO 1 1 ? ? ? C . n C 1 2 PRO 2 2 ? ? ? C . n C 1 3 GLY 3 3 3 GLY GLY C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 PRO 5 5 5 PRO PRO C . n C 1 6 GLY 6 6 6 GLY GLY C . n C 1 7 PRO 7 7 7 PRO PRO C . n C 1 8 PRO 8 8 8 PRO PRO C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 PRO 10 10 10 PRO PRO C . n C 1 11 PRO 11 11 11 PRO PRO C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 HYP 13 13 13 HYP HYP C . y C 1 14 VAL 14 14 14 VAL VAL C . y C 1 15 GLY 15 15 15 GLY GLY C . n C 1 16 PRO 16 16 16 PRO PRO C . y C 1 17 PRO 17 17 17 PRO PRO C . y C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 PRO 19 19 19 PRO PRO C . n C 1 20 PRO 20 20 20 PRO PRO C . n C 1 21 GLY 21 21 21 GLY GLY C . n C 1 22 PRO 22 22 22 PRO PRO C . n C 1 23 PRO 23 23 23 PRO PRO C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 PRO 25 25 25 PRO PRO C . n C 1 26 PRO 26 26 26 PRO PRO C . n C 1 27 GLY 27 27 27 GLY GLY C . n D 1 1 PRO 1 1 ? ? ? D . n D 1 2 PRO 2 2 ? ? ? D . n D 1 3 GLY 3 3 3 GLY GLY D . n D 1 4 PRO 4 4 4 PRO PRO D . n D 1 5 PRO 5 5 5 PRO PRO D . n D 1 6 GLY 6 6 6 GLY GLY D . n D 1 7 PRO 7 7 7 PRO PRO D . n D 1 8 PRO 8 8 8 PRO PRO D . n D 1 9 GLY 9 9 9 GLY GLY D . n D 1 10 PRO 10 10 10 PRO PRO D . n D 1 11 PRO 11 11 11 PRO PRO D . n D 1 12 GLY 12 12 12 GLY GLY D . n D 1 13 HYP 13 13 13 HYP HYP D . y D 1 14 VAL 14 14 14 VAL VAL D . y D 1 15 GLY 15 15 15 GLY GLY D . n D 1 16 PRO 16 16 16 PRO PRO D . y D 1 17 PRO 17 17 17 PRO PRO D . y D 1 18 GLY 18 18 18 GLY GLY D . n D 1 19 PRO 19 19 19 PRO PRO D . n D 1 20 PRO 20 20 20 PRO PRO D . n D 1 21 GLY 21 21 21 GLY GLY D . n D 1 22 PRO 22 22 22 PRO PRO D . n D 1 23 PRO 23 23 23 PRO PRO D . n D 1 24 GLY 24 24 24 GLY GLY D . n D 1 25 PRO 25 25 25 PRO PRO D . n D 1 26 PRO 26 26 26 PRO PRO D . n D 1 27 GLY 27 27 ? ? ? D . n E 1 1 PRO 1 1 1 PRO PRO E . n E 1 2 PRO 2 2 2 PRO PRO E . n E 1 3 GLY 3 3 3 GLY GLY E . n E 1 4 PRO 4 4 4 PRO PRO E . n E 1 5 PRO 5 5 5 PRO PRO E . n E 1 6 GLY 6 6 6 GLY GLY E . n E 1 7 PRO 7 7 7 PRO PRO E . n E 1 8 PRO 8 8 8 PRO PRO E . n E 1 9 GLY 9 9 9 GLY GLY E . n E 1 10 PRO 10 10 10 PRO PRO E . n E 1 11 PRO 11 11 11 PRO PRO E . n E 1 12 GLY 12 12 12 GLY GLY E . n E 1 13 HYP 13 13 13 HYP HYP E . y E 1 14 VAL 14 14 14 VAL VAL E . y E 1 15 GLY 15 15 15 GLY GLY E . n E 1 16 PRO 16 16 16 PRO PRO E . y E 1 17 PRO 17 17 17 PRO PRO E . y E 1 18 GLY 18 18 18 GLY GLY E . n E 1 19 PRO 19 19 19 PRO PRO E . n E 1 20 PRO 20 20 20 PRO PRO E . n E 1 21 GLY 21 21 21 GLY GLY E . n E 1 22 PRO 22 22 22 PRO PRO E . n E 1 23 PRO 23 23 23 PRO PRO E . n E 1 24 GLY 24 24 24 GLY GLY E . n E 1 25 PRO 25 25 25 PRO PRO E . n E 1 26 PRO 26 26 ? ? ? E . n E 1 27 GLY 27 27 ? ? ? E . n F 1 1 PRO 1 1 ? ? ? F . n F 1 2 PRO 2 2 ? ? ? F . n F 1 3 GLY 3 3 ? ? ? F . n F 1 4 PRO 4 4 4 PRO PRO F . n F 1 5 PRO 5 5 5 PRO PRO F . n F 1 6 GLY 6 6 6 GLY GLY F . n F 1 7 PRO 7 7 7 PRO PRO F . n F 1 8 PRO 8 8 8 PRO PRO F . n F 1 9 GLY 9 9 9 GLY GLY F . n F 1 10 PRO 10 10 10 PRO PRO F . n F 1 11 PRO 11 11 11 PRO PRO F . n F 1 12 GLY 12 12 12 GLY GLY F . n F 1 13 HYP 13 13 13 HYP HYP F . y F 1 13 PRO 13 13 113 PRO PRO F . y F 1 14 VAL 14 14 14 VAL VAL F . y F 1 14 PRO 14 14 114 PRO PRO F . y F 1 15 GLY 15 15 15 GLY GLY F . n F 1 16 PRO 16 16 16 PRO PRO F . y F 1 16 HYP 16 16 116 HYP HYP F . y F 1 17 PRO 17 17 17 PRO PRO F . y F 1 17 VAL 17 17 117 VAL VAL F . y F 1 18 GLY 18 18 18 GLY GLY F . n F 1 19 PRO 19 19 19 PRO PRO F . n F 1 20 PRO 20 20 20 PRO PRO F . n F 1 21 GLY 21 21 21 GLY GLY F . n F 1 22 PRO 22 22 22 PRO PRO F . n F 1 23 PRO 23 23 23 PRO PRO F . n F 1 24 GLY 24 24 24 GLY GLY F . n F 1 25 PRO 25 25 25 PRO PRO F . n F 1 26 PRO 26 26 26 PRO PRO F . n F 1 27 GLY 27 27 27 GLY GLY F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 HOH 1 103 103 HOH HOH A . G 2 HOH 2 127 127 HOH HOH A . G 2 HOH 3 129 129 HOH HOH A . G 2 HOH 4 130 130 HOH HOH A . G 2 HOH 5 134 134 HOH HOH A . G 2 HOH 6 142 142 HOH HOH A . G 2 HOH 7 147 147 HOH HOH A . G 2 HOH 8 148 148 HOH HOH A . G 2 HOH 9 155 155 HOH HOH A . G 2 HOH 10 159 159 HOH HOH A . G 2 HOH 11 168 168 HOH HOH A . G 2 HOH 12 177 177 HOH HOH A . G 2 HOH 13 179 179 HOH HOH A . G 2 HOH 14 184 184 HOH HOH A . G 2 HOH 15 191 191 HOH HOH A . G 2 HOH 16 192 192 HOH HOH A . G 2 HOH 17 196 196 HOH HOH A . G 2 HOH 18 197 197 HOH HOH A . G 2 HOH 19 209 209 HOH HOH A . G 2 HOH 20 212 212 HOH HOH A . G 2 HOH 21 219 219 HOH HOH A . G 2 HOH 22 231 231 HOH HOH A . G 2 HOH 23 239 239 HOH HOH A . G 2 HOH 24 240 240 HOH HOH A . G 2 HOH 25 244 244 HOH HOH A . G 2 HOH 26 250 250 HOH HOH A . G 2 HOH 27 259 259 HOH HOH A . G 2 HOH 28 263 263 HOH HOH A . G 2 HOH 29 267 267 HOH HOH A . G 2 HOH 30 283 283 HOH HOH A . G 2 HOH 31 284 284 HOH HOH A . G 2 HOH 32 286 286 HOH HOH A . G 2 HOH 33 290 290 HOH HOH A . G 2 HOH 34 291 291 HOH HOH A . G 2 HOH 35 299 299 HOH HOH A . G 2 HOH 36 306 306 HOH HOH A . G 2 HOH 37 308 308 HOH HOH A . G 2 HOH 38 310 310 HOH HOH A . G 2 HOH 39 312 312 HOH HOH A . G 2 HOH 40 316 316 HOH HOH A . G 2 HOH 41 326 326 HOH HOH A . G 2 HOH 42 340 340 HOH HOH A . G 2 HOH 43 354 354 HOH HOH A . G 2 HOH 44 368 368 HOH HOH A . G 2 HOH 45 370 370 HOH HOH A . G 2 HOH 46 374 374 HOH HOH A . G 2 HOH 47 375 375 HOH HOH A . H 2 HOH 1 104 104 HOH HOH B . H 2 HOH 2 112 112 HOH HOH B . H 2 HOH 3 113 113 HOH HOH B . H 2 HOH 4 117 117 HOH HOH B . H 2 HOH 5 121 121 HOH HOH B . H 2 HOH 6 124 124 HOH HOH B . H 2 HOH 7 126 126 HOH HOH B . H 2 HOH 8 132 132 HOH HOH B . H 2 HOH 9 133 133 HOH HOH B . H 2 HOH 10 135 135 HOH HOH B . H 2 HOH 11 137 137 HOH HOH B . H 2 HOH 12 144 144 HOH HOH B . H 2 HOH 13 162 162 HOH HOH B . H 2 HOH 14 163 163 HOH HOH B . H 2 HOH 15 164 164 HOH HOH B . H 2 HOH 16 165 165 HOH HOH B . H 2 HOH 17 182 182 HOH HOH B . H 2 HOH 18 185 185 HOH HOH B . H 2 HOH 19 194 194 HOH HOH B . H 2 HOH 20 198 198 HOH HOH B . H 2 HOH 21 200 200 HOH HOH B . H 2 HOH 22 236 236 HOH HOH B . H 2 HOH 23 243 243 HOH HOH B . H 2 HOH 24 248 248 HOH HOH B . H 2 HOH 25 278 278 HOH HOH B . H 2 HOH 26 285 285 HOH HOH B . H 2 HOH 27 289 289 HOH HOH B . H 2 HOH 28 292 292 HOH HOH B . H 2 HOH 29 297 297 HOH HOH B . H 2 HOH 30 311 311 HOH HOH B . H 2 HOH 31 319 319 HOH HOH B . H 2 HOH 32 324 324 HOH HOH B . H 2 HOH 33 325 325 HOH HOH B . H 2 HOH 34 330 330 HOH HOH B . H 2 HOH 35 343 343 HOH HOH B . H 2 HOH 36 344 344 HOH HOH B . H 2 HOH 37 346 346 HOH HOH B . H 2 HOH 38 349 349 HOH HOH B . H 2 HOH 39 355 355 HOH HOH B . H 2 HOH 40 356 356 HOH HOH B . H 2 HOH 41 360 360 HOH HOH B . H 2 HOH 42 361 361 HOH HOH B . H 2 HOH 43 362 362 HOH HOH B . H 2 HOH 44 365 365 HOH HOH B . H 2 HOH 45 366 366 HOH HOH B . H 2 HOH 46 367 367 HOH HOH B . H 2 HOH 47 376 376 HOH HOH B . H 2 HOH 48 377 377 HOH HOH B . H 2 HOH 49 380 380 HOH HOH B . I 2 HOH 1 101 101 HOH HOH C . I 2 HOH 2 107 107 HOH HOH C . I 2 HOH 3 110 110 HOH HOH C . I 2 HOH 4 111 111 HOH HOH C . I 2 HOH 5 114 114 HOH HOH C . I 2 HOH 6 123 123 HOH HOH C . I 2 HOH 7 125 125 HOH HOH C . I 2 HOH 8 128 128 HOH HOH C . I 2 HOH 9 139 139 HOH HOH C . I 2 HOH 10 150 150 HOH HOH C . I 2 HOH 11 154 154 HOH HOH C . I 2 HOH 12 157 157 HOH HOH C . I 2 HOH 13 166 166 HOH HOH C . I 2 HOH 14 167 167 HOH HOH C . I 2 HOH 15 170 170 HOH HOH C . I 2 HOH 16 173 173 HOH HOH C . I 2 HOH 17 181 181 HOH HOH C . I 2 HOH 18 183 183 HOH HOH C . I 2 HOH 19 186 186 HOH HOH C . I 2 HOH 20 189 189 HOH HOH C . I 2 HOH 21 195 195 HOH HOH C . I 2 HOH 22 205 205 HOH HOH C . I 2 HOH 23 211 211 HOH HOH C . I 2 HOH 24 214 214 HOH HOH C . I 2 HOH 25 229 229 HOH HOH C . I 2 HOH 26 232 232 HOH HOH C . I 2 HOH 27 238 238 HOH HOH C . I 2 HOH 28 241 241 HOH HOH C . I 2 HOH 29 246 246 HOH HOH C . I 2 HOH 30 254 254 HOH HOH C . I 2 HOH 31 256 256 HOH HOH C . I 2 HOH 32 260 260 HOH HOH C . I 2 HOH 33 261 261 HOH HOH C . I 2 HOH 34 262 262 HOH HOH C . I 2 HOH 35 264 264 HOH HOH C . I 2 HOH 36 268 268 HOH HOH C . I 2 HOH 37 275 275 HOH HOH C . I 2 HOH 38 277 277 HOH HOH C . I 2 HOH 39 279 279 HOH HOH C . I 2 HOH 40 282 282 HOH HOH C . I 2 HOH 41 288 288 HOH HOH C . I 2 HOH 42 294 294 HOH HOH C . I 2 HOH 43 300 300 HOH HOH C . I 2 HOH 44 303 303 HOH HOH C . I 2 HOH 45 304 304 HOH HOH C . I 2 HOH 46 307 307 HOH HOH C . I 2 HOH 47 313 313 HOH HOH C . I 2 HOH 48 317 317 HOH HOH C . I 2 HOH 49 321 321 HOH HOH C . I 2 HOH 50 322 322 HOH HOH C . I 2 HOH 51 331 331 HOH HOH C . I 2 HOH 52 334 334 HOH HOH C . I 2 HOH 53 341 341 HOH HOH C . I 2 HOH 54 345 345 HOH HOH C . I 2 HOH 55 351 351 HOH HOH C . I 2 HOH 56 364 364 HOH HOH C . J 2 HOH 1 109 109 HOH HOH D . J 2 HOH 2 116 116 HOH HOH D . J 2 HOH 3 120 120 HOH HOH D . J 2 HOH 4 138 138 HOH HOH D . J 2 HOH 5 143 143 HOH HOH D . J 2 HOH 6 145 145 HOH HOH D . J 2 HOH 7 146 146 HOH HOH D . J 2 HOH 8 156 156 HOH HOH D . J 2 HOH 9 160 160 HOH HOH D . J 2 HOH 10 161 161 HOH HOH D . J 2 HOH 11 169 169 HOH HOH D . J 2 HOH 12 171 171 HOH HOH D . J 2 HOH 13 174 174 HOH HOH D . J 2 HOH 14 176 176 HOH HOH D . J 2 HOH 15 187 187 HOH HOH D . J 2 HOH 16 203 203 HOH HOH D . J 2 HOH 17 207 207 HOH HOH D . J 2 HOH 18 216 216 HOH HOH D . J 2 HOH 19 221 221 HOH HOH D . J 2 HOH 20 223 223 HOH HOH D . J 2 HOH 21 226 226 HOH HOH D . J 2 HOH 22 247 247 HOH HOH D . J 2 HOH 23 249 249 HOH HOH D . J 2 HOH 24 251 251 HOH HOH D . J 2 HOH 25 252 252 HOH HOH D . J 2 HOH 26 253 253 HOH HOH D . J 2 HOH 27 255 255 HOH HOH D . J 2 HOH 28 257 257 HOH HOH D . J 2 HOH 29 258 258 HOH HOH D . J 2 HOH 30 280 280 HOH HOH D . J 2 HOH 31 293 293 HOH HOH D . J 2 HOH 32 295 295 HOH HOH D . J 2 HOH 33 301 301 HOH HOH D . J 2 HOH 34 328 328 HOH HOH D . J 2 HOH 35 335 335 HOH HOH D . J 2 HOH 36 348 348 HOH HOH D . J 2 HOH 37 379 379 HOH HOH D . K 2 HOH 1 102 102 HOH HOH E . K 2 HOH 2 108 108 HOH HOH E . K 2 HOH 3 119 119 HOH HOH E . K 2 HOH 4 131 131 HOH HOH E . K 2 HOH 5 141 141 HOH HOH E . K 2 HOH 6 149 149 HOH HOH E . K 2 HOH 7 153 153 HOH HOH E . K 2 HOH 8 172 172 HOH HOH E . K 2 HOH 9 180 180 HOH HOH E . K 2 HOH 10 188 188 HOH HOH E . K 2 HOH 11 199 199 HOH HOH E . K 2 HOH 12 204 204 HOH HOH E . K 2 HOH 13 206 206 HOH HOH E . K 2 HOH 14 210 210 HOH HOH E . K 2 HOH 15 213 213 HOH HOH E . K 2 HOH 16 217 217 HOH HOH E . K 2 HOH 17 218 218 HOH HOH E . K 2 HOH 18 220 220 HOH HOH E . K 2 HOH 19 224 224 HOH HOH E . K 2 HOH 20 227 227 HOH HOH E . K 2 HOH 21 228 228 HOH HOH E . K 2 HOH 22 230 230 HOH HOH E . K 2 HOH 23 233 233 HOH HOH E . K 2 HOH 24 234 234 HOH HOH E . K 2 HOH 25 235 235 HOH HOH E . K 2 HOH 26 237 237 HOH HOH E . K 2 HOH 27 242 242 HOH HOH E . K 2 HOH 28 245 245 HOH HOH E . K 2 HOH 29 265 265 HOH HOH E . K 2 HOH 30 271 271 HOH HOH E . K 2 HOH 31 272 272 HOH HOH E . K 2 HOH 32 273 273 HOH HOH E . K 2 HOH 33 281 281 HOH HOH E . K 2 HOH 34 296 296 HOH HOH E . K 2 HOH 35 298 298 HOH HOH E . K 2 HOH 36 305 305 HOH HOH E . K 2 HOH 37 318 318 HOH HOH E . K 2 HOH 38 320 320 HOH HOH E . K 2 HOH 39 323 323 HOH HOH E . K 2 HOH 40 333 333 HOH HOH E . K 2 HOH 41 350 350 HOH HOH E . K 2 HOH 42 363 363 HOH HOH E . K 2 HOH 43 371 371 HOH HOH E . L 2 HOH 1 105 105 HOH HOH F . L 2 HOH 2 106 106 HOH HOH F . L 2 HOH 3 115 115 HOH HOH F . L 2 HOH 4 118 118 HOH HOH F . L 2 HOH 5 122 122 HOH HOH F . L 2 HOH 6 136 136 HOH HOH F . L 2 HOH 7 140 140 HOH HOH F . L 2 HOH 8 151 151 HOH HOH F . L 2 HOH 9 152 152 HOH HOH F . L 2 HOH 10 158 158 HOH HOH F . L 2 HOH 11 175 175 HOH HOH F . L 2 HOH 12 178 178 HOH HOH F . L 2 HOH 13 190 190 HOH HOH F . L 2 HOH 14 193 193 HOH HOH F . L 2 HOH 15 201 201 HOH HOH F . L 2 HOH 16 202 202 HOH HOH F . L 2 HOH 17 208 208 HOH HOH F . L 2 HOH 18 215 215 HOH HOH F . L 2 HOH 19 222 222 HOH HOH F . L 2 HOH 20 225 225 HOH HOH F . L 2 HOH 21 266 266 HOH HOH F . L 2 HOH 22 269 269 HOH HOH F . L 2 HOH 23 270 270 HOH HOH F . L 2 HOH 24 274 274 HOH HOH F . L 2 HOH 25 276 276 HOH HOH F . L 2 HOH 26 287 287 HOH HOH F . L 2 HOH 27 302 302 HOH HOH F . L 2 HOH 28 309 309 HOH HOH F . L 2 HOH 29 314 314 HOH HOH F . L 2 HOH 30 315 315 HOH HOH F . L 2 HOH 31 327 327 HOH HOH F . L 2 HOH 32 329 329 HOH HOH F . L 2 HOH 33 332 332 HOH HOH F . L 2 HOH 34 336 336 HOH HOH F . L 2 HOH 35 337 337 HOH HOH F . L 2 HOH 36 338 338 HOH HOH F . L 2 HOH 37 339 339 HOH HOH F . L 2 HOH 38 342 342 HOH HOH F . L 2 HOH 39 347 347 HOH HOH F . L 2 HOH 40 352 352 HOH HOH F . L 2 HOH 41 353 353 HOH HOH F . L 2 HOH 42 357 357 HOH HOH F . L 2 HOH 43 358 358 HOH HOH F . L 2 HOH 44 359 359 HOH HOH F . L 2 HOH 45 369 369 HOH HOH F . L 2 HOH 46 372 372 HOH HOH F . L 2 HOH 47 373 373 HOH HOH F . L 2 HOH 48 378 378 HOH HOH F . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A HYP 13 A HYP 13 ? PRO 4-HYDROXYPROLINE 2 B HYP 13 B HYP 13 ? PRO 4-HYDROXYPROLINE 3 C HYP 13 C HYP 13 ? PRO 4-HYDROXYPROLINE 4 D HYP 13 D HYP 13 ? PRO 4-HYDROXYPROLINE 5 E HYP 13 E HYP 13 ? PRO 4-HYDROXYPROLINE 6 F HYP 13 F HYP 13 ? PRO 4-HYDROXYPROLINE 7 F HYP 16 F HYP 16 ? PRO 4-HYDROXYPROLINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I 2 1 D,E,F,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4280 ? 1 MORE -28 ? 1 'SSA (A^2)' 3990 ? 2 'ABSA (A^2)' 4160 ? 2 MORE -29 ? 2 'SSA (A^2)' 3920 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-27 4 'Structure model' 1 3 2012-06-06 5 'Structure model' 1 4 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' Other 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' pdbx_poly_seq_scheme 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_ref_seq_dif.details' 6 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 HKL-2000 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHASER phasing . ? 6 # _pdbx_entry_details.sequence_details ;THIS SEQUENCE ADOPTS A TRIPLE-HELICAL STRUCTURE SIMILAR TO THE COLLAGEN-HELIX. THE RESIDUES PRO F 13, PRO F 14, HYP F 16, VAL F 17 ASSIGNED ALTERNATE POSITION B ARE MICROHETEROGENEITY. ; _pdbx_entry_details.entry_id 3A0M _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 27 ? A GLY 27 2 1 Y 1 B PRO 1 ? B PRO 1 3 1 Y 1 B PRO 2 ? B PRO 2 4 1 Y 1 B GLY 3 ? B GLY 3 5 1 Y 1 C PRO 1 ? C PRO 1 6 1 Y 1 C PRO 2 ? C PRO 2 7 1 Y 1 D PRO 1 ? D PRO 1 8 1 Y 1 D PRO 2 ? D PRO 2 9 1 Y 1 D GLY 27 ? D GLY 27 10 1 Y 1 E PRO 26 ? E PRO 26 11 1 Y 1 E GLY 27 ? E GLY 27 12 1 Y 1 F PRO 1 ? F PRO 1 13 1 Y 1 F PRO 2 ? F PRO 2 14 1 Y 1 F GLY 3 ? F GLY 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal GLY N N N N 1 GLY CA C N N 2 GLY C C N N 3 GLY O O N N 4 GLY OXT O N N 5 GLY H H N N 6 GLY H2 H N N 7 GLY HA2 H N N 8 GLY HA3 H N N 9 GLY HXT H N N 10 HOH O O N N 11 HOH H1 H N N 12 HOH H2 H N N 13 HYP N N N N 14 HYP CA C N S 15 HYP C C N N 16 HYP O O N N 17 HYP CB C N N 18 HYP CG C N R 19 HYP CD C N N 20 HYP OD1 O N N 21 HYP OXT O N N 22 HYP H H N N 23 HYP HA H N N 24 HYP HB2 H N N 25 HYP HB3 H N N 26 HYP HG H N N 27 HYP HD22 H N N 28 HYP HD23 H N N 29 HYP HD1 H N N 30 HYP HXT H N N 31 PRO N N N N 32 PRO CA C N S 33 PRO C C N N 34 PRO O O N N 35 PRO CB C N N 36 PRO CG C N N 37 PRO CD C N N 38 PRO OXT O N N 39 PRO H H N N 40 PRO HA H N N 41 PRO HB2 H N N 42 PRO HB3 H N N 43 PRO HG2 H N N 44 PRO HG3 H N N 45 PRO HD2 H N N 46 PRO HD3 H N N 47 PRO HXT H N N 48 VAL N N N N 49 VAL CA C N S 50 VAL C C N N 51 VAL O O N N 52 VAL CB C N N 53 VAL CG1 C N N 54 VAL CG2 C N N 55 VAL OXT O N N 56 VAL H H N N 57 VAL H2 H N N 58 VAL HA H N N 59 VAL HB H N N 60 VAL HG11 H N N 61 VAL HG12 H N N 62 VAL HG13 H N N 63 VAL HG21 H N N 64 VAL HG22 H N N 65 VAL HG23 H N N 66 VAL HXT H N N 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GLY N CA sing N N 1 GLY N H sing N N 2 GLY N H2 sing N N 3 GLY CA C sing N N 4 GLY CA HA2 sing N N 5 GLY CA HA3 sing N N 6 GLY C O doub N N 7 GLY C OXT sing N N 8 GLY OXT HXT sing N N 9 HOH O H1 sing N N 10 HOH O H2 sing N N 11 HYP N CA sing N N 12 HYP N CD sing N N 13 HYP N H sing N N 14 HYP CA C sing N N 15 HYP CA CB sing N N 16 HYP CA HA sing N N 17 HYP C O doub N N 18 HYP C OXT sing N N 19 HYP CB CG sing N N 20 HYP CB HB2 sing N N 21 HYP CB HB3 sing N N 22 HYP CG CD sing N N 23 HYP CG OD1 sing N N 24 HYP CG HG sing N N 25 HYP CD HD22 sing N N 26 HYP CD HD23 sing N N 27 HYP OD1 HD1 sing N N 28 HYP OXT HXT sing N N 29 PRO N CA sing N N 30 PRO N CD sing N N 31 PRO N H sing N N 32 PRO CA C sing N N 33 PRO CA CB sing N N 34 PRO CA HA sing N N 35 PRO C O doub N N 36 PRO C OXT sing N N 37 PRO CB CG sing N N 38 PRO CB HB2 sing N N 39 PRO CB HB3 sing N N 40 PRO CG CD sing N N 41 PRO CG HG2 sing N N 42 PRO CG HG3 sing N N 43 PRO CD HD2 sing N N 44 PRO CD HD3 sing N N 45 PRO OXT HXT sing N N 46 VAL N CA sing N N 47 VAL N H sing N N 48 VAL N H2 sing N N 49 VAL CA C sing N N 50 VAL CA CB sing N N 51 VAL CA HA sing N N 52 VAL C O doub N N 53 VAL C OXT sing N N 54 VAL CB CG1 sing N N 55 VAL CB CG2 sing N N 56 VAL CB HB sing N N 57 VAL CG1 HG11 sing N N 58 VAL CG1 HG12 sing N N 59 VAL CG1 HG13 sing N N 60 VAL CG2 HG21 sing N N 61 VAL CG2 HG22 sing N N 62 VAL CG2 HG23 sing N N 63 VAL OXT HXT sing N N 64 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CUO _pdbx_initial_refinement_model.details 'PDB entry 2CUO' # _pdbx_reflns_twin.domain_id 1 _pdbx_reflns_twin.crystal_id 1 _pdbx_reflns_twin.diffrn_id 1 _pdbx_reflns_twin.type ? _pdbx_reflns_twin.operator h,-k,-l _pdbx_reflns_twin.fraction 0.395 #