data_3AYD # _entry.id 3AYD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3AYD pdb_00003ayd 10.2210/pdb3ayd/pdb RCSB RCSB029849 ? ? WWPDB D_1000029849 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3AYA . unspecified PDB 3AYC . unspecified PDB 3AYE . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3AYD _pdbx_database_status.recvd_initial_deposition_date 2011-05-04 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bian, C.F.' 1 'Li, D.F.' 2 'Wang, D.C.' 3 # _citation.id primary _citation.title 'Structural basis for distinct binding properties of the human galectins to thomsen-friedenreich antigen' _citation.journal_abbrev 'Plos One' _citation.journal_volume 6 _citation.page_first e25007 _citation.page_last e25007 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21949831 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0025007 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bian, C.F.' 1 ? primary 'Zhang, Y.' 2 ? primary 'Sun, H.' 3 ? primary 'Li, D.F.' 4 ? primary 'Wang, D.C.' 5 ? # _cell.entry_id 3AYD _cell.length_a 50.730 _cell.length_b 50.730 _cell.length_c 106.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3AYD _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin-3 15409.682 1 ? ? 'C-TERMINAL DOMAIN, UNP residues 117-250' ? 2 branched man 'beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose' 383.349 2 ? ? ? ? 3 non-polymer syn P-NITROPHENOL 139.109 2 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 5 water nat water 18.015 245 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;Gal-3, 35 kDa lectin, Carbohydrate-binding protein 35, CBP 35, Galactose-specific lectin 3, Galactoside-binding protein, GALBP, IgE-binding protein, L-31, Laminin-binding protein, Lectin L-29, Mac-2 antigen ; 2 'Thomsen-Friedenreich antigen' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESG KPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_seq_one_letter_code_can ;MPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESG KPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 TYR n 1 4 ASN n 1 5 LEU n 1 6 PRO n 1 7 LEU n 1 8 PRO n 1 9 GLY n 1 10 GLY n 1 11 VAL n 1 12 VAL n 1 13 PRO n 1 14 ARG n 1 15 MET n 1 16 LEU n 1 17 ILE n 1 18 THR n 1 19 ILE n 1 20 LEU n 1 21 GLY n 1 22 THR n 1 23 VAL n 1 24 LYS n 1 25 PRO n 1 26 ASN n 1 27 ALA n 1 28 ASN n 1 29 ARG n 1 30 ILE n 1 31 ALA n 1 32 LEU n 1 33 ASP n 1 34 PHE n 1 35 GLN n 1 36 ARG n 1 37 GLY n 1 38 ASN n 1 39 ASP n 1 40 VAL n 1 41 ALA n 1 42 PHE n 1 43 HIS n 1 44 PHE n 1 45 ASN n 1 46 PRO n 1 47 ARG n 1 48 PHE n 1 49 ASN n 1 50 GLU n 1 51 ASN n 1 52 ASN n 1 53 ARG n 1 54 ARG n 1 55 VAL n 1 56 ILE n 1 57 VAL n 1 58 CYS n 1 59 ASN n 1 60 THR n 1 61 LYS n 1 62 LEU n 1 63 ASP n 1 64 ASN n 1 65 ASN n 1 66 TRP n 1 67 GLY n 1 68 ARG n 1 69 GLU n 1 70 GLU n 1 71 ARG n 1 72 GLN n 1 73 SER n 1 74 VAL n 1 75 PHE n 1 76 PRO n 1 77 PHE n 1 78 GLU n 1 79 SER n 1 80 GLY n 1 81 LYS n 1 82 PRO n 1 83 PHE n 1 84 LYS n 1 85 ILE n 1 86 GLN n 1 87 VAL n 1 88 LEU n 1 89 VAL n 1 90 GLU n 1 91 PRO n 1 92 ASP n 1 93 HIS n 1 94 PHE n 1 95 LYS n 1 96 VAL n 1 97 ALA n 1 98 VAL n 1 99 ASN n 1 100 ASP n 1 101 ALA n 1 102 HIS n 1 103 LEU n 1 104 LEU n 1 105 GLN n 1 106 TYR n 1 107 ASN n 1 108 HIS n 1 109 ARG n 1 110 VAL n 1 111 LYS n 1 112 LYS n 1 113 LEU n 1 114 ASN n 1 115 GLU n 1 116 ILE n 1 117 SER n 1 118 LYS n 1 119 LEU n 1 120 GLY n 1 121 ILE n 1 122 SER n 1 123 GLY n 1 124 ASP n 1 125 ILE n 1 126 ASP n 1 127 LEU n 1 128 THR n 1 129 SER n 1 130 ALA n 1 131 SER n 1 132 TYR n 1 133 THR n 1 134 MET n 1 135 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LGALS3, MAC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LEG3_HUMAN _struct_ref.pdbx_db_accession P17931 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGK PFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _struct_ref.pdbx_align_begin 117 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3AYD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 135 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17931 _struct_ref_seq.db_align_beg 117 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 117 _struct_ref_seq.pdbx_auth_seq_align_end 250 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3AYD _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P17931 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 116 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE ; 'C8 H15 N O6' 221.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NPO non-polymer . P-NITROPHENOL ? 'C6 H5 N O3' 139.109 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3AYD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_percent_sol 52.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '2.0 A.S., 0.1MBis-Tris, 5mM beta-Mercaptoethanol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 85 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-11-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9793 # _reflns.entry_id 3AYD _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40.62 _reflns.d_resolution_high 1.9 _reflns.number_obs 13046 _reflns.number_all 13120 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value 0.058 _reflns.pdbx_netI_over_sigmaI 29.4 _reflns.B_iso_Wilson_estimate 19.9 _reflns.pdbx_redundancy 9.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs 0.076 _reflns_shell.pdbx_Rsym_value 0.076 _reflns_shell.meanI_over_sigI_obs 15.4 _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1859 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3AYD _refine.ls_number_reflns_obs 11093 _refine.ls_number_reflns_all 12363 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.93 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 94.2 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.217 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1270 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 23.9 _refine.aniso_B[1][1] 2.04 _refine.aniso_B[2][2] 2.04 _refine.aniso_B[3][3] -4.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol 63.8435 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'Used weighted full matrix least squares procedure.' _refine.pdbx_starting_model 'PDB ENTRY 2NN8' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3AYD _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 1.10 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.14 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1086 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 90 _refine_hist.number_atoms_solvent 245 _refine_hist.number_atoms_total 1421 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 33.93 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.007 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.5 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 26.1 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 1.11 ? ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it 1.528 1.500 ? ? ? 'X-RAY DIFFRACTION' c_scbond_it 2.103 2.000 ? ? ? 'X-RAY DIFFRACTION' c_mcangle_it 2.289 2.000 ? ? ? 'X-RAY DIFFRACTION' c_scangle_it 3.128 2.500 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.184 _refine_ls_shell.percent_reflns_obs 92.9 _refine_ls_shell.R_factor_R_free 0.225 _refine_ls_shell.R_factor_R_free_error 0.016 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 206 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1784 _refine_ls_shell.redundancy_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 water_rep.param ? 'X-RAY DIFFRACTION' 3 ion.param ? 'X-RAY DIFFRACTION' 4 tfn-.param ? 'X-RAY DIFFRACTION' 5 BME.param ? # _struct.entry_id 3AYD _struct.title 'Crystal structure of galectin-3 CRD domian complexed with TFN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3AYD _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'Rossmann Fold, a beta-galactose-binding protein, beta-galactosides, cell-surface, nuclear, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 112 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ILE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 116 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 227 _struct_conf.end_auth_comp_id ILE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 231 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? D NPO . OH ? ? ? 1_555 B A2G . C1 ? ? A NPO 251 B A2G 1 1_555 ? ? ? ? ? ? ? 1.436 ? ? covale2 covale one ? E NPO . OH ? ? ? 1_555 C A2G . C1 ? ? A NPO 254 C A2G 1 1_555 ? ? ? ? ? ? ? 1.434 ? ? covale3 covale both ? B A2G . O3 ? ? ? 1_555 B GAL . C1 ? ? B A2G 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.434 ? ? covale4 covale both ? C A2G . O3 ? ? ? 1_555 C GAL . C1 ? ? C A2G 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.434 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 3 ? PRO A 6 ? TYR A 118 PRO A 121 A 2 LYS A 118 ? GLY A 123 ? LYS A 233 GLY A 238 A 3 ILE A 30 ? ARG A 36 ? ILE A 145 ARG A 151 A 4 ASP A 39 ? ARG A 47 ? ASP A 154 ARG A 162 A 5 VAL A 55 ? LEU A 62 ? VAL A 170 LEU A 177 A 6 ASN A 65 ? TRP A 66 ? ASN A 180 TRP A 181 B 1 TYR A 3 ? PRO A 6 ? TYR A 118 PRO A 121 B 2 LYS A 118 ? GLY A 123 ? LYS A 233 GLY A 238 B 3 ILE A 30 ? ARG A 36 ? ILE A 145 ARG A 151 B 4 ASP A 39 ? ARG A 47 ? ASP A 154 ARG A 162 B 5 VAL A 55 ? LEU A 62 ? VAL A 170 LEU A 177 B 6 GLU A 70 ? GLN A 72 ? GLU A 185 GLN A 187 C 1 ALA A 101 ? ASN A 107 ? ALA A 216 ASN A 222 C 2 HIS A 93 ? VAL A 98 ? HIS A 208 VAL A 213 C 3 PRO A 82 ? VAL A 89 ? PRO A 197 VAL A 204 C 4 MET A 15 ? VAL A 23 ? MET A 130 VAL A 138 C 5 ILE A 125 ? MET A 134 ? ILE A 240 MET A 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 3 ? N TYR A 118 O ILE A 121 ? O ILE A 236 A 2 3 O GLY A 120 ? O GLY A 235 N ASP A 33 ? N ASP A 148 A 3 4 N PHE A 34 ? N PHE A 149 O PHE A 42 ? O PHE A 157 A 4 5 N ARG A 47 ? N ARG A 162 O VAL A 55 ? O VAL A 170 A 5 6 N LEU A 62 ? N LEU A 177 O ASN A 65 ? O ASN A 180 B 1 2 N TYR A 3 ? N TYR A 118 O ILE A 121 ? O ILE A 236 B 2 3 O GLY A 120 ? O GLY A 235 N ASP A 33 ? N ASP A 148 B 3 4 N PHE A 34 ? N PHE A 149 O PHE A 42 ? O PHE A 157 B 4 5 N ARG A 47 ? N ARG A 162 O VAL A 55 ? O VAL A 170 B 5 6 N CYS A 58 ? N CYS A 173 O GLU A 70 ? O GLU A 185 C 1 2 O LEU A 104 ? O LEU A 219 N VAL A 96 ? N VAL A 211 C 2 3 O ALA A 97 ? O ALA A 212 N GLN A 86 ? N GLN A 201 C 3 4 O ILE A 85 ? O ILE A 200 N ILE A 19 ? N ILE A 134 C 4 5 N LEU A 20 ? N LEU A 135 O THR A 128 ? O THR A 243 # _database_PDB_matrix.entry_id 3AYD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3AYD _atom_sites.fract_transf_matrix[1][1] 0.019712 _atom_sites.fract_transf_matrix[1][2] 0.011381 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022762 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009365 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 116 116 MET MET A . n A 1 2 PRO 2 117 117 PRO PRO A . n A 1 3 TYR 3 118 118 TYR TYR A . n A 1 4 ASN 4 119 119 ASN ASN A . n A 1 5 LEU 5 120 120 LEU LEU A . n A 1 6 PRO 6 121 121 PRO PRO A . n A 1 7 LEU 7 122 122 LEU LEU A . n A 1 8 PRO 8 123 123 PRO PRO A . n A 1 9 GLY 9 124 124 GLY GLY A . n A 1 10 GLY 10 125 125 GLY GLY A . n A 1 11 VAL 11 126 126 VAL VAL A . n A 1 12 VAL 12 127 127 VAL VAL A . n A 1 13 PRO 13 128 128 PRO PRO A . n A 1 14 ARG 14 129 129 ARG ARG A . n A 1 15 MET 15 130 130 MET MET A . n A 1 16 LEU 16 131 131 LEU LEU A . n A 1 17 ILE 17 132 132 ILE ILE A . n A 1 18 THR 18 133 133 THR THR A . n A 1 19 ILE 19 134 134 ILE ILE A . n A 1 20 LEU 20 135 135 LEU LEU A . n A 1 21 GLY 21 136 136 GLY GLY A . n A 1 22 THR 22 137 137 THR THR A . n A 1 23 VAL 23 138 138 VAL VAL A . n A 1 24 LYS 24 139 139 LYS LYS A . n A 1 25 PRO 25 140 140 PRO PRO A . n A 1 26 ASN 26 141 141 ASN ASN A . n A 1 27 ALA 27 142 142 ALA ALA A . n A 1 28 ASN 28 143 143 ASN ASN A . n A 1 29 ARG 29 144 144 ARG ARG A . n A 1 30 ILE 30 145 145 ILE ILE A . n A 1 31 ALA 31 146 146 ALA ALA A . n A 1 32 LEU 32 147 147 LEU LEU A . n A 1 33 ASP 33 148 148 ASP ASP A . n A 1 34 PHE 34 149 149 PHE PHE A . n A 1 35 GLN 35 150 150 GLN GLN A . n A 1 36 ARG 36 151 151 ARG ARG A . n A 1 37 GLY 37 152 152 GLY GLY A . n A 1 38 ASN 38 153 153 ASN ASN A . n A 1 39 ASP 39 154 154 ASP ASP A . n A 1 40 VAL 40 155 155 VAL VAL A . n A 1 41 ALA 41 156 156 ALA ALA A . n A 1 42 PHE 42 157 157 PHE PHE A . n A 1 43 HIS 43 158 158 HIS HIS A . n A 1 44 PHE 44 159 159 PHE PHE A . n A 1 45 ASN 45 160 160 ASN ASN A . n A 1 46 PRO 46 161 161 PRO PRO A . n A 1 47 ARG 47 162 162 ARG ARG A . n A 1 48 PHE 48 163 163 PHE PHE A . n A 1 49 ASN 49 164 164 ASN ASN A . n A 1 50 GLU 50 165 165 GLU GLU A . n A 1 51 ASN 51 166 166 ASN ASN A . n A 1 52 ASN 52 167 167 ASN ASN A . n A 1 53 ARG 53 168 168 ARG ARG A . n A 1 54 ARG 54 169 169 ARG ARG A . n A 1 55 VAL 55 170 170 VAL VAL A . n A 1 56 ILE 56 171 171 ILE ILE A . n A 1 57 VAL 57 172 172 VAL VAL A . n A 1 58 CYS 58 173 173 CYS CYS A . n A 1 59 ASN 59 174 174 ASN ASN A . n A 1 60 THR 60 175 175 THR THR A . n A 1 61 LYS 61 176 176 LYS LYS A . n A 1 62 LEU 62 177 177 LEU LEU A . n A 1 63 ASP 63 178 178 ASP ASP A . n A 1 64 ASN 64 179 179 ASN ASN A . n A 1 65 ASN 65 180 180 ASN ASN A . n A 1 66 TRP 66 181 181 TRP TRP A . n A 1 67 GLY 67 182 182 GLY GLY A . n A 1 68 ARG 68 183 183 ARG ARG A . n A 1 69 GLU 69 184 184 GLU GLU A . n A 1 70 GLU 70 185 185 GLU GLU A . n A 1 71 ARG 71 186 186 ARG ARG A . n A 1 72 GLN 72 187 187 GLN GLN A . n A 1 73 SER 73 188 188 SER SER A . n A 1 74 VAL 74 189 189 VAL VAL A . n A 1 75 PHE 75 190 190 PHE PHE A . n A 1 76 PRO 76 191 191 PRO PRO A . n A 1 77 PHE 77 192 192 PHE PHE A . n A 1 78 GLU 78 193 193 GLU GLU A . n A 1 79 SER 79 194 194 SER SER A . n A 1 80 GLY 80 195 195 GLY GLY A . n A 1 81 LYS 81 196 196 LYS LYS A . n A 1 82 PRO 82 197 197 PRO PRO A . n A 1 83 PHE 83 198 198 PHE PHE A . n A 1 84 LYS 84 199 199 LYS LYS A . n A 1 85 ILE 85 200 200 ILE ILE A . n A 1 86 GLN 86 201 201 GLN GLN A . n A 1 87 VAL 87 202 202 VAL VAL A . n A 1 88 LEU 88 203 203 LEU LEU A . n A 1 89 VAL 89 204 204 VAL VAL A . n A 1 90 GLU 90 205 205 GLU GLU A . n A 1 91 PRO 91 206 206 PRO PRO A . n A 1 92 ASP 92 207 207 ASP ASP A . n A 1 93 HIS 93 208 208 HIS HIS A . n A 1 94 PHE 94 209 209 PHE PHE A . n A 1 95 LYS 95 210 210 LYS LYS A . n A 1 96 VAL 96 211 211 VAL VAL A . n A 1 97 ALA 97 212 212 ALA ALA A . n A 1 98 VAL 98 213 213 VAL VAL A . n A 1 99 ASN 99 214 214 ASN ASN A . n A 1 100 ASP 100 215 215 ASP ASP A . n A 1 101 ALA 101 216 216 ALA ALA A . n A 1 102 HIS 102 217 217 HIS HIS A . n A 1 103 LEU 103 218 218 LEU LEU A . n A 1 104 LEU 104 219 219 LEU LEU A . n A 1 105 GLN 105 220 220 GLN GLN A . n A 1 106 TYR 106 221 221 TYR TYR A . n A 1 107 ASN 107 222 222 ASN ASN A . n A 1 108 HIS 108 223 223 HIS HIS A . n A 1 109 ARG 109 224 224 ARG ARG A . n A 1 110 VAL 110 225 225 VAL VAL A . n A 1 111 LYS 111 226 226 LYS LYS A . n A 1 112 LYS 112 227 227 LYS LYS A . n A 1 113 LEU 113 228 228 LEU LEU A . n A 1 114 ASN 114 229 229 ASN ASN A . n A 1 115 GLU 115 230 230 GLU GLU A . n A 1 116 ILE 116 231 231 ILE ILE A . n A 1 117 SER 117 232 232 SER SER A . n A 1 118 LYS 118 233 233 LYS LYS A . n A 1 119 LEU 119 234 234 LEU LEU A . n A 1 120 GLY 120 235 235 GLY GLY A . n A 1 121 ILE 121 236 236 ILE ILE A . n A 1 122 SER 122 237 237 SER SER A . n A 1 123 GLY 123 238 238 GLY GLY A . n A 1 124 ASP 124 239 239 ASP ASP A . n A 1 125 ILE 125 240 240 ILE ILE A . n A 1 126 ASP 126 241 241 ASP ASP A . n A 1 127 LEU 127 242 242 LEU LEU A . n A 1 128 THR 128 243 243 THR THR A . n A 1 129 SER 129 244 244 SER SER A . n A 1 130 ALA 130 245 245 ALA ALA A . n A 1 131 SER 131 246 246 SER SER A . n A 1 132 TYR 132 247 247 TYR TYR A . n A 1 133 THR 133 248 248 THR THR A . n A 1 134 MET 134 249 249 MET MET A . n A 1 135 ILE 135 250 250 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NPO 1 251 251 NPO TFN A . E 3 NPO 1 254 252 NPO TFN A . F 4 SO4 1 1 1 SO4 SO4 A . G 4 SO4 1 2 2 SO4 SO4 A . H 4 SO4 1 3 3 SO4 SO4 A . I 4 SO4 1 4 4 SO4 SO4 A . J 5 HOH 1 5 5 HOH HOH A . J 5 HOH 2 6 6 HOH HOH A . J 5 HOH 3 7 7 HOH HOH A . J 5 HOH 4 8 8 HOH HOH A . J 5 HOH 5 9 9 HOH HOH A . J 5 HOH 6 10 10 HOH HOH A . J 5 HOH 7 11 11 HOH HOH A . J 5 HOH 8 12 12 HOH HOH A . J 5 HOH 9 13 13 HOH HOH A . J 5 HOH 10 14 14 HOH HOH A . J 5 HOH 11 15 15 HOH HOH A . J 5 HOH 12 16 16 HOH HOH A . J 5 HOH 13 17 17 HOH HOH A . J 5 HOH 14 18 18 HOH HOH A . J 5 HOH 15 19 19 HOH HOH A . J 5 HOH 16 20 20 HOH HOH A . J 5 HOH 17 21 21 HOH HOH A . J 5 HOH 18 22 22 HOH HOH A . J 5 HOH 19 23 23 HOH HOH A . J 5 HOH 20 24 24 HOH HOH A . J 5 HOH 21 25 25 HOH HOH A . J 5 HOH 22 26 26 HOH HOH A . J 5 HOH 23 27 27 HOH HOH A . J 5 HOH 24 28 28 HOH HOH A . J 5 HOH 25 29 29 HOH HOH A . J 5 HOH 26 30 30 HOH HOH A . J 5 HOH 27 31 31 HOH HOH A . J 5 HOH 28 32 32 HOH HOH A . J 5 HOH 29 33 33 HOH HOH A . J 5 HOH 30 34 34 HOH HOH A . J 5 HOH 31 35 35 HOH HOH A . J 5 HOH 32 36 36 HOH HOH A . J 5 HOH 33 37 37 HOH HOH A . J 5 HOH 34 38 38 HOH HOH A . J 5 HOH 35 39 39 HOH HOH A . J 5 HOH 36 40 40 HOH HOH A . J 5 HOH 37 41 41 HOH HOH A . J 5 HOH 38 42 42 HOH HOH A . J 5 HOH 39 43 43 HOH HOH A . J 5 HOH 40 44 44 HOH HOH A . J 5 HOH 41 45 45 HOH HOH A . J 5 HOH 42 46 46 HOH HOH A . J 5 HOH 43 47 47 HOH HOH A . J 5 HOH 44 48 48 HOH HOH A . J 5 HOH 45 49 49 HOH HOH A . J 5 HOH 46 50 50 HOH HOH A . J 5 HOH 47 51 51 HOH HOH A . J 5 HOH 48 52 52 HOH HOH A . J 5 HOH 49 53 53 HOH HOH A . J 5 HOH 50 54 54 HOH HOH A . J 5 HOH 51 55 55 HOH HOH A . J 5 HOH 52 56 56 HOH HOH A . J 5 HOH 53 57 57 HOH HOH A . J 5 HOH 54 58 58 HOH HOH A . J 5 HOH 55 59 59 HOH HOH A . J 5 HOH 56 60 60 HOH HOH A . J 5 HOH 57 61 61 HOH HOH A . J 5 HOH 58 62 62 HOH HOH A . J 5 HOH 59 63 63 HOH HOH A . J 5 HOH 60 64 64 HOH HOH A . J 5 HOH 61 65 65 HOH HOH A . J 5 HOH 62 66 66 HOH HOH A . J 5 HOH 63 67 67 HOH HOH A . J 5 HOH 64 68 68 HOH HOH A . J 5 HOH 65 69 69 HOH HOH A . J 5 HOH 66 70 70 HOH HOH A . J 5 HOH 67 71 71 HOH HOH A . J 5 HOH 68 72 72 HOH HOH A . J 5 HOH 69 73 73 HOH HOH A . J 5 HOH 70 74 74 HOH HOH A . J 5 HOH 71 75 75 HOH HOH A . J 5 HOH 72 76 76 HOH HOH A . J 5 HOH 73 77 77 HOH HOH A . J 5 HOH 74 78 78 HOH HOH A . J 5 HOH 75 79 79 HOH HOH A . J 5 HOH 76 80 80 HOH HOH A . J 5 HOH 77 81 81 HOH HOH A . J 5 HOH 78 82 82 HOH HOH A . J 5 HOH 79 83 83 HOH HOH A . J 5 HOH 80 84 84 HOH HOH A . J 5 HOH 81 85 85 HOH HOH A . J 5 HOH 82 86 86 HOH HOH A . J 5 HOH 83 87 87 HOH HOH A . J 5 HOH 84 88 88 HOH HOH A . J 5 HOH 85 89 89 HOH HOH A . J 5 HOH 86 90 90 HOH HOH A . J 5 HOH 87 91 91 HOH HOH A . J 5 HOH 88 92 92 HOH HOH A . J 5 HOH 89 93 93 HOH HOH A . J 5 HOH 90 94 94 HOH HOH A . J 5 HOH 91 95 95 HOH HOH A . J 5 HOH 92 96 96 HOH HOH A . J 5 HOH 93 97 97 HOH HOH A . J 5 HOH 94 98 98 HOH HOH A . J 5 HOH 95 99 99 HOH HOH A . J 5 HOH 96 100 100 HOH HOH A . J 5 HOH 97 101 101 HOH HOH A . J 5 HOH 98 102 102 HOH HOH A . J 5 HOH 99 103 103 HOH HOH A . J 5 HOH 100 104 104 HOH HOH A . J 5 HOH 101 105 105 HOH HOH A . J 5 HOH 102 106 106 HOH HOH A . J 5 HOH 103 107 107 HOH HOH A . J 5 HOH 104 108 108 HOH HOH A . J 5 HOH 105 109 109 HOH HOH A . J 5 HOH 106 110 110 HOH HOH A . J 5 HOH 107 111 111 HOH HOH A . J 5 HOH 108 112 112 HOH HOH A . J 5 HOH 109 113 113 HOH HOH A . J 5 HOH 110 114 114 HOH HOH A . J 5 HOH 111 115 115 HOH HOH A . J 5 HOH 112 257 1 HOH HOH A . J 5 HOH 113 258 2 HOH HOH A . J 5 HOH 114 259 3 HOH HOH A . J 5 HOH 115 260 4 HOH HOH A . J 5 HOH 116 261 116 HOH HOH A . J 5 HOH 117 262 117 HOH HOH A . J 5 HOH 118 263 118 HOH HOH A . J 5 HOH 119 264 119 HOH HOH A . J 5 HOH 120 265 120 HOH HOH A . J 5 HOH 121 266 121 HOH HOH A . J 5 HOH 122 267 122 HOH HOH A . J 5 HOH 123 268 123 HOH HOH A . J 5 HOH 124 269 124 HOH HOH A . J 5 HOH 125 270 125 HOH HOH A . J 5 HOH 126 271 126 HOH HOH A . J 5 HOH 127 272 127 HOH HOH A . J 5 HOH 128 273 128 HOH HOH A . J 5 HOH 129 274 129 HOH HOH A . J 5 HOH 130 275 130 HOH HOH A . J 5 HOH 131 276 131 HOH HOH A . J 5 HOH 132 277 132 HOH HOH A . J 5 HOH 133 278 133 HOH HOH A . J 5 HOH 134 279 134 HOH HOH A . J 5 HOH 135 280 135 HOH HOH A . J 5 HOH 136 281 136 HOH HOH A . J 5 HOH 137 282 137 HOH HOH A . J 5 HOH 138 283 138 HOH HOH A . J 5 HOH 139 284 139 HOH HOH A . J 5 HOH 140 285 140 HOH HOH A . J 5 HOH 141 286 141 HOH HOH A . J 5 HOH 142 287 142 HOH HOH A . J 5 HOH 143 288 143 HOH HOH A . J 5 HOH 144 289 144 HOH HOH A . J 5 HOH 145 290 145 HOH HOH A . J 5 HOH 146 291 146 HOH HOH A . J 5 HOH 147 292 147 HOH HOH A . J 5 HOH 148 293 148 HOH HOH A . J 5 HOH 149 294 149 HOH HOH A . J 5 HOH 150 295 150 HOH HOH A . J 5 HOH 151 296 151 HOH HOH A . J 5 HOH 152 297 152 HOH HOH A . J 5 HOH 153 298 153 HOH HOH A . J 5 HOH 154 299 154 HOH HOH A . J 5 HOH 155 300 155 HOH HOH A . J 5 HOH 156 301 156 HOH HOH A . J 5 HOH 157 302 157 HOH HOH A . J 5 HOH 158 303 158 HOH HOH A . J 5 HOH 159 304 159 HOH HOH A . J 5 HOH 160 305 160 HOH HOH A . J 5 HOH 161 306 161 HOH HOH A . J 5 HOH 162 307 162 HOH HOH A . J 5 HOH 163 308 163 HOH HOH A . J 5 HOH 164 309 164 HOH HOH A . J 5 HOH 165 310 165 HOH HOH A . J 5 HOH 166 311 166 HOH HOH A . J 5 HOH 167 312 167 HOH HOH A . J 5 HOH 168 313 168 HOH HOH A . J 5 HOH 169 314 169 HOH HOH A . J 5 HOH 170 315 170 HOH HOH A . J 5 HOH 171 316 171 HOH HOH A . J 5 HOH 172 317 172 HOH HOH A . J 5 HOH 173 318 173 HOH HOH A . J 5 HOH 174 319 174 HOH HOH A . J 5 HOH 175 320 175 HOH HOH A . J 5 HOH 176 321 176 HOH HOH A . J 5 HOH 177 322 177 HOH HOH A . J 5 HOH 178 323 178 HOH HOH A . J 5 HOH 179 324 179 HOH HOH A . J 5 HOH 180 325 180 HOH HOH A . J 5 HOH 181 326 181 HOH HOH A . J 5 HOH 182 327 182 HOH HOH A . J 5 HOH 183 328 183 HOH HOH A . J 5 HOH 184 329 184 HOH HOH A . J 5 HOH 185 330 185 HOH HOH A . J 5 HOH 186 331 186 HOH HOH A . J 5 HOH 187 332 187 HOH HOH A . J 5 HOH 188 333 188 HOH HOH A . J 5 HOH 189 334 189 HOH HOH A . J 5 HOH 190 335 190 HOH HOH A . J 5 HOH 191 336 191 HOH HOH A . J 5 HOH 192 337 192 HOH HOH A . J 5 HOH 193 338 193 HOH HOH A . J 5 HOH 194 339 194 HOH HOH A . J 5 HOH 195 340 195 HOH HOH A . J 5 HOH 196 341 196 HOH HOH A . J 5 HOH 197 342 197 HOH HOH A . J 5 HOH 198 343 198 HOH HOH A . J 5 HOH 199 344 199 HOH HOH A . J 5 HOH 200 345 200 HOH HOH A . J 5 HOH 201 346 201 HOH HOH A . J 5 HOH 202 347 202 HOH HOH A . J 5 HOH 203 348 203 HOH HOH A . J 5 HOH 204 349 204 HOH HOH A . J 5 HOH 205 350 205 HOH HOH A . J 5 HOH 206 351 206 HOH HOH A . J 5 HOH 207 352 207 HOH HOH A . J 5 HOH 208 353 208 HOH HOH A . J 5 HOH 209 354 209 HOH HOH A . J 5 HOH 210 355 210 HOH HOH A . J 5 HOH 211 356 211 HOH HOH A . J 5 HOH 212 357 212 HOH HOH A . J 5 HOH 213 358 213 HOH HOH A . J 5 HOH 214 359 214 HOH HOH A . J 5 HOH 215 360 215 HOH HOH A . J 5 HOH 216 361 216 HOH HOH A . J 5 HOH 217 362 217 HOH HOH A . J 5 HOH 218 363 218 HOH HOH A . J 5 HOH 219 364 219 HOH HOH A . J 5 HOH 220 365 220 HOH HOH A . J 5 HOH 221 366 221 HOH HOH A . J 5 HOH 222 367 222 HOH HOH A . J 5 HOH 223 368 223 HOH HOH A . J 5 HOH 224 369 224 HOH HOH A . J 5 HOH 225 370 225 HOH HOH A . J 5 HOH 226 371 226 HOH HOH A . J 5 HOH 227 372 227 HOH HOH A . J 5 HOH 228 373 228 HOH HOH A . J 5 HOH 229 374 229 HOH HOH A . J 5 HOH 230 375 230 HOH HOH A . J 5 HOH 231 376 231 HOH HOH A . J 5 HOH 232 377 232 HOH HOH A . J 5 HOH 233 378 233 HOH HOH A . J 5 HOH 234 379 234 HOH HOH A . J 5 HOH 235 380 235 HOH HOH A . J 5 HOH 236 381 236 HOH HOH A . J 5 HOH 237 382 237 HOH HOH A . J 5 HOH 238 383 238 HOH HOH A . J 5 HOH 239 384 239 HOH HOH A . J 5 HOH 240 385 240 HOH HOH A . J 5 HOH 241 386 241 HOH HOH A . J 5 HOH 242 387 242 HOH HOH A . J 5 HOH 243 388 243 HOH HOH A . J 5 HOH 244 389 244 HOH HOH A . J 5 HOH 245 390 245 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900084 _pdbx_molecule_features.name 'Thomsen-Friedenreich antigen' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Antigen _pdbx_molecule_features.details oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900084 B 2 PRD_900084 C # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-12 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2023-11-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Structure summary' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Database references' 8 3 'Structure model' 'Refinement description' 9 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' entity_name_com 5 2 'Structure model' pdbx_branch_scheme 6 2 'Structure model' pdbx_chem_comp_identifier 7 2 'Structure model' pdbx_entity_branch 8 2 'Structure model' pdbx_entity_branch_descriptor 9 2 'Structure model' pdbx_entity_branch_link 10 2 'Structure model' pdbx_entity_branch_list 11 2 'Structure model' pdbx_entity_nonpoly 12 2 'Structure model' pdbx_molecule_features 13 2 'Structure model' pdbx_nonpoly_scheme 14 2 'Structure model' pdbx_struct_assembly_gen 15 2 'Structure model' struct_asym 16 2 'Structure model' struct_conn 17 2 'Structure model' struct_ref_seq_dif 18 2 'Structure model' struct_site 19 2 'Structure model' struct_site_gen 20 3 'Structure model' chem_comp 21 3 'Structure model' chem_comp_atom 22 3 'Structure model' chem_comp_bond 23 3 'Structure model' database_2 24 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.type_symbol' 14 2 'Structure model' '_chem_comp.name' 15 2 'Structure model' '_chem_comp.type' 16 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 25 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 2 'Structure model' '_struct_ref_seq_dif.details' 30 3 'Structure model' '_chem_comp.pdbx_synonyms' 31 3 'Structure model' '_database_2.pdbx_DOI' 32 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASES phasing . ? 2 CNS refinement . ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3AYD _pdbx_entry_details.nonpolymer_details 'TF P-NITROPHENYLS ARE COMPOSED OF RESIDUES 251-253 AND 254-256 (NPO-A2G-GAL) RESPECTIVELY.' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 129 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 89.45 _pdbx_validate_torsion.psi -7.04 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A2G O5 O N N 1 A2G C1 C N S 2 A2G O1 O N N 3 A2G C2 C N R 4 A2G N2 N N N 5 A2G C3 C N R 6 A2G O3 O N N 7 A2G C4 C N R 8 A2G O4 O N N 9 A2G C5 C N R 10 A2G C6 C N N 11 A2G O6 O N N 12 A2G C7 C N N 13 A2G O7 O N N 14 A2G C8 C N N 15 A2G H1 H N N 16 A2G HO1 H N N 17 A2G H2 H N N 18 A2G HN2 H N N 19 A2G H3 H N N 20 A2G HO3 H N N 21 A2G H4 H N N 22 A2G HO4 H N N 23 A2G H5 H N N 24 A2G H61 H N N 25 A2G H81 H N N 26 A2G H82 H N N 27 A2G H83 H N N 28 A2G H62 H N N 29 A2G HO6 H N N 30 ALA N N N N 31 ALA CA C N S 32 ALA C C N N 33 ALA O O N N 34 ALA CB C N N 35 ALA OXT O N N 36 ALA H H N N 37 ALA H2 H N N 38 ALA HA H N N 39 ALA HB1 H N N 40 ALA HB2 H N N 41 ALA HB3 H N N 42 ALA HXT H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ASN N N N N 71 ASN CA C N S 72 ASN C C N N 73 ASN O O N N 74 ASN CB C N N 75 ASN CG C N N 76 ASN OD1 O N N 77 ASN ND2 N N N 78 ASN OXT O N N 79 ASN H H N N 80 ASN H2 H N N 81 ASN HA H N N 82 ASN HB2 H N N 83 ASN HB3 H N N 84 ASN HD21 H N N 85 ASN HD22 H N N 86 ASN HXT H N N 87 ASP N N N N 88 ASP CA C N S 89 ASP C C N N 90 ASP O O N N 91 ASP CB C N N 92 ASP CG C N N 93 ASP OD1 O N N 94 ASP OD2 O N N 95 ASP OXT O N N 96 ASP H H N N 97 ASP H2 H N N 98 ASP HA H N N 99 ASP HB2 H N N 100 ASP HB3 H N N 101 ASP HD2 H N N 102 ASP HXT H N N 103 CYS N N N N 104 CYS CA C N R 105 CYS C C N N 106 CYS O O N N 107 CYS CB C N N 108 CYS SG S N N 109 CYS OXT O N N 110 CYS H H N N 111 CYS H2 H N N 112 CYS HA H N N 113 CYS HB2 H N N 114 CYS HB3 H N N 115 CYS HG H N N 116 CYS HXT H N N 117 GAL C1 C N R 118 GAL C2 C N R 119 GAL C3 C N S 120 GAL C4 C N R 121 GAL C5 C N R 122 GAL C6 C N N 123 GAL O1 O N N 124 GAL O2 O N N 125 GAL O3 O N N 126 GAL O4 O N N 127 GAL O5 O N N 128 GAL O6 O N N 129 GAL H1 H N N 130 GAL H2 H N N 131 GAL H3 H N N 132 GAL H4 H N N 133 GAL H5 H N N 134 GAL H61 H N N 135 GAL H62 H N N 136 GAL HO1 H N N 137 GAL HO2 H N N 138 GAL HO3 H N N 139 GAL HO4 H N N 140 GAL HO6 H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 HIS N N N N 191 HIS CA C N S 192 HIS C C N N 193 HIS O O N N 194 HIS CB C N N 195 HIS CG C Y N 196 HIS ND1 N Y N 197 HIS CD2 C Y N 198 HIS CE1 C Y N 199 HIS NE2 N Y N 200 HIS OXT O N N 201 HIS H H N N 202 HIS H2 H N N 203 HIS HA H N N 204 HIS HB2 H N N 205 HIS HB3 H N N 206 HIS HD1 H N N 207 HIS HD2 H N N 208 HIS HE1 H N N 209 HIS HE2 H N N 210 HIS HXT H N N 211 HOH O O N N 212 HOH H1 H N N 213 HOH H2 H N N 214 ILE N N N N 215 ILE CA C N S 216 ILE C C N N 217 ILE O O N N 218 ILE CB C N S 219 ILE CG1 C N N 220 ILE CG2 C N N 221 ILE CD1 C N N 222 ILE OXT O N N 223 ILE H H N N 224 ILE H2 H N N 225 ILE HA H N N 226 ILE HB H N N 227 ILE HG12 H N N 228 ILE HG13 H N N 229 ILE HG21 H N N 230 ILE HG22 H N N 231 ILE HG23 H N N 232 ILE HD11 H N N 233 ILE HD12 H N N 234 ILE HD13 H N N 235 ILE HXT H N N 236 LEU N N N N 237 LEU CA C N S 238 LEU C C N N 239 LEU O O N N 240 LEU CB C N N 241 LEU CG C N N 242 LEU CD1 C N N 243 LEU CD2 C N N 244 LEU OXT O N N 245 LEU H H N N 246 LEU H2 H N N 247 LEU HA H N N 248 LEU HB2 H N N 249 LEU HB3 H N N 250 LEU HG H N N 251 LEU HD11 H N N 252 LEU HD12 H N N 253 LEU HD13 H N N 254 LEU HD21 H N N 255 LEU HD22 H N N 256 LEU HD23 H N N 257 LEU HXT H N N 258 LYS N N N N 259 LYS CA C N S 260 LYS C C N N 261 LYS O O N N 262 LYS CB C N N 263 LYS CG C N N 264 LYS CD C N N 265 LYS CE C N N 266 LYS NZ N N N 267 LYS OXT O N N 268 LYS H H N N 269 LYS H2 H N N 270 LYS HA H N N 271 LYS HB2 H N N 272 LYS HB3 H N N 273 LYS HG2 H N N 274 LYS HG3 H N N 275 LYS HD2 H N N 276 LYS HD3 H N N 277 LYS HE2 H N N 278 LYS HE3 H N N 279 LYS HZ1 H N N 280 LYS HZ2 H N N 281 LYS HZ3 H N N 282 LYS HXT H N N 283 MET N N N N 284 MET CA C N S 285 MET C C N N 286 MET O O N N 287 MET CB C N N 288 MET CG C N N 289 MET SD S N N 290 MET CE C N N 291 MET OXT O N N 292 MET H H N N 293 MET H2 H N N 294 MET HA H N N 295 MET HB2 H N N 296 MET HB3 H N N 297 MET HG2 H N N 298 MET HG3 H N N 299 MET HE1 H N N 300 MET HE2 H N N 301 MET HE3 H N N 302 MET HXT H N N 303 NPO C1 C Y N 304 NPO C2 C Y N 305 NPO C3 C Y N 306 NPO C4 C Y N 307 NPO C5 C Y N 308 NPO C6 C Y N 309 NPO OH O N N 310 NPO N1 N N N 311 NPO O2 O N N 312 NPO O3 O N N 313 NPO H2 H N N 314 NPO H3 H N N 315 NPO H5 H N N 316 NPO H6 H N N 317 NPO HO H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 SO4 S S N N 373 SO4 O1 O N N 374 SO4 O2 O N N 375 SO4 O3 O N N 376 SO4 O4 O N N 377 THR N N N N 378 THR CA C N S 379 THR C C N N 380 THR O O N N 381 THR CB C N R 382 THR OG1 O N N 383 THR CG2 C N N 384 THR OXT O N N 385 THR H H N N 386 THR H2 H N N 387 THR HA H N N 388 THR HB H N N 389 THR HG1 H N N 390 THR HG21 H N N 391 THR HG22 H N N 392 THR HG23 H N N 393 THR HXT H N N 394 TRP N N N N 395 TRP CA C N S 396 TRP C C N N 397 TRP O O N N 398 TRP CB C N N 399 TRP CG C Y N 400 TRP CD1 C Y N 401 TRP CD2 C Y N 402 TRP NE1 N Y N 403 TRP CE2 C Y N 404 TRP CE3 C Y N 405 TRP CZ2 C Y N 406 TRP CZ3 C Y N 407 TRP CH2 C Y N 408 TRP OXT O N N 409 TRP H H N N 410 TRP H2 H N N 411 TRP HA H N N 412 TRP HB2 H N N 413 TRP HB3 H N N 414 TRP HD1 H N N 415 TRP HE1 H N N 416 TRP HE3 H N N 417 TRP HZ2 H N N 418 TRP HZ3 H N N 419 TRP HH2 H N N 420 TRP HXT H N N 421 TYR N N N N 422 TYR CA C N S 423 TYR C C N N 424 TYR O O N N 425 TYR CB C N N 426 TYR CG C Y N 427 TYR CD1 C Y N 428 TYR CD2 C Y N 429 TYR CE1 C Y N 430 TYR CE2 C Y N 431 TYR CZ C Y N 432 TYR OH O N N 433 TYR OXT O N N 434 TYR H H N N 435 TYR H2 H N N 436 TYR HA H N N 437 TYR HB2 H N N 438 TYR HB3 H N N 439 TYR HD1 H N N 440 TYR HD2 H N N 441 TYR HE1 H N N 442 TYR HE2 H N N 443 TYR HH H N N 444 TYR HXT H N N 445 VAL N N N N 446 VAL CA C N S 447 VAL C C N N 448 VAL O O N N 449 VAL CB C N N 450 VAL CG1 C N N 451 VAL CG2 C N N 452 VAL OXT O N N 453 VAL H H N N 454 VAL H2 H N N 455 VAL HA H N N 456 VAL HB H N N 457 VAL HG11 H N N 458 VAL HG12 H N N 459 VAL HG13 H N N 460 VAL HG21 H N N 461 VAL HG22 H N N 462 VAL HG23 H N N 463 VAL HXT H N N 464 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A2G O5 C5 sing N N 1 A2G C1 O5 sing N N 2 A2G C1 C2 sing N N 3 A2G C1 H1 sing N N 4 A2G O1 C1 sing N N 5 A2G O1 HO1 sing N N 6 A2G C2 C3 sing N N 7 A2G C2 H2 sing N N 8 A2G N2 C2 sing N N 9 A2G N2 HN2 sing N N 10 A2G C3 C4 sing N N 11 A2G C3 O3 sing N N 12 A2G C3 H3 sing N N 13 A2G O3 HO3 sing N N 14 A2G C4 O4 sing N N 15 A2G C4 H4 sing N N 16 A2G O4 HO4 sing N N 17 A2G C5 C4 sing N N 18 A2G C5 C6 sing N N 19 A2G C5 H5 sing N N 20 A2G C6 O6 sing N N 21 A2G C6 H61 sing N N 22 A2G C7 N2 sing N N 23 A2G O7 C7 doub N N 24 A2G C8 C7 sing N N 25 A2G C8 H81 sing N N 26 A2G C8 H82 sing N N 27 A2G C8 H83 sing N N 28 A2G C6 H62 sing N N 29 A2G O6 HO6 sing N N 30 ALA N CA sing N N 31 ALA N H sing N N 32 ALA N H2 sing N N 33 ALA CA C sing N N 34 ALA CA CB sing N N 35 ALA CA HA sing N N 36 ALA C O doub N N 37 ALA C OXT sing N N 38 ALA CB HB1 sing N N 39 ALA CB HB2 sing N N 40 ALA CB HB3 sing N N 41 ALA OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 CYS N CA sing N N 100 CYS N H sing N N 101 CYS N H2 sing N N 102 CYS CA C sing N N 103 CYS CA CB sing N N 104 CYS CA HA sing N N 105 CYS C O doub N N 106 CYS C OXT sing N N 107 CYS CB SG sing N N 108 CYS CB HB2 sing N N 109 CYS CB HB3 sing N N 110 CYS SG HG sing N N 111 CYS OXT HXT sing N N 112 GAL C1 C2 sing N N 113 GAL C1 O1 sing N N 114 GAL C1 O5 sing N N 115 GAL C1 H1 sing N N 116 GAL C2 C3 sing N N 117 GAL C2 O2 sing N N 118 GAL C2 H2 sing N N 119 GAL C3 C4 sing N N 120 GAL C3 O3 sing N N 121 GAL C3 H3 sing N N 122 GAL C4 C5 sing N N 123 GAL C4 O4 sing N N 124 GAL C4 H4 sing N N 125 GAL C5 C6 sing N N 126 GAL C5 O5 sing N N 127 GAL C5 H5 sing N N 128 GAL C6 O6 sing N N 129 GAL C6 H61 sing N N 130 GAL C6 H62 sing N N 131 GAL O1 HO1 sing N N 132 GAL O2 HO2 sing N N 133 GAL O3 HO3 sing N N 134 GAL O4 HO4 sing N N 135 GAL O6 HO6 sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 NPO C1 C2 doub Y N 291 NPO C1 C6 sing Y N 292 NPO C1 N1 sing N N 293 NPO C2 C3 sing Y N 294 NPO C2 H2 sing N N 295 NPO C3 C4 doub Y N 296 NPO C3 H3 sing N N 297 NPO C4 C5 sing Y N 298 NPO C4 OH sing N N 299 NPO C5 C6 doub Y N 300 NPO C5 H5 sing N N 301 NPO C6 H6 sing N N 302 NPO OH HO sing N N 303 NPO N1 O2 sing N N 304 NPO N1 O3 doub N N 305 PHE N CA sing N N 306 PHE N H sing N N 307 PHE N H2 sing N N 308 PHE CA C sing N N 309 PHE CA CB sing N N 310 PHE CA HA sing N N 311 PHE C O doub N N 312 PHE C OXT sing N N 313 PHE CB CG sing N N 314 PHE CB HB2 sing N N 315 PHE CB HB3 sing N N 316 PHE CG CD1 doub Y N 317 PHE CG CD2 sing Y N 318 PHE CD1 CE1 sing Y N 319 PHE CD1 HD1 sing N N 320 PHE CD2 CE2 doub Y N 321 PHE CD2 HD2 sing N N 322 PHE CE1 CZ doub Y N 323 PHE CE1 HE1 sing N N 324 PHE CE2 CZ sing Y N 325 PHE CE2 HE2 sing N N 326 PHE CZ HZ sing N N 327 PHE OXT HXT sing N N 328 PRO N CA sing N N 329 PRO N CD sing N N 330 PRO N H sing N N 331 PRO CA C sing N N 332 PRO CA CB sing N N 333 PRO CA HA sing N N 334 PRO C O doub N N 335 PRO C OXT sing N N 336 PRO CB CG sing N N 337 PRO CB HB2 sing N N 338 PRO CB HB3 sing N N 339 PRO CG CD sing N N 340 PRO CG HG2 sing N N 341 PRO CG HG3 sing N N 342 PRO CD HD2 sing N N 343 PRO CD HD3 sing N N 344 PRO OXT HXT sing N N 345 SER N CA sing N N 346 SER N H sing N N 347 SER N H2 sing N N 348 SER CA C sing N N 349 SER CA CB sing N N 350 SER CA HA sing N N 351 SER C O doub N N 352 SER C OXT sing N N 353 SER CB OG sing N N 354 SER CB HB2 sing N N 355 SER CB HB3 sing N N 356 SER OG HG sing N N 357 SER OXT HXT sing N N 358 SO4 S O1 doub N N 359 SO4 S O2 doub N N 360 SO4 S O3 sing N N 361 SO4 S O4 sing N N 362 THR N CA sing N N 363 THR N H sing N N 364 THR N H2 sing N N 365 THR CA C sing N N 366 THR CA CB sing N N 367 THR CA HA sing N N 368 THR C O doub N N 369 THR C OXT sing N N 370 THR CB OG1 sing N N 371 THR CB CG2 sing N N 372 THR CB HB sing N N 373 THR OG1 HG1 sing N N 374 THR CG2 HG21 sing N N 375 THR CG2 HG22 sing N N 376 THR CG2 HG23 sing N N 377 THR OXT HXT sing N N 378 TRP N CA sing N N 379 TRP N H sing N N 380 TRP N H2 sing N N 381 TRP CA C sing N N 382 TRP CA CB sing N N 383 TRP CA HA sing N N 384 TRP C O doub N N 385 TRP C OXT sing N N 386 TRP CB CG sing N N 387 TRP CB HB2 sing N N 388 TRP CB HB3 sing N N 389 TRP CG CD1 doub Y N 390 TRP CG CD2 sing Y N 391 TRP CD1 NE1 sing Y N 392 TRP CD1 HD1 sing N N 393 TRP CD2 CE2 doub Y N 394 TRP CD2 CE3 sing Y N 395 TRP NE1 CE2 sing Y N 396 TRP NE1 HE1 sing N N 397 TRP CE2 CZ2 sing Y N 398 TRP CE3 CZ3 doub Y N 399 TRP CE3 HE3 sing N N 400 TRP CZ2 CH2 doub Y N 401 TRP CZ2 HZ2 sing N N 402 TRP CZ3 CH2 sing Y N 403 TRP CZ3 HZ3 sing N N 404 TRP CH2 HH2 sing N N 405 TRP OXT HXT sing N N 406 TYR N CA sing N N 407 TYR N H sing N N 408 TYR N H2 sing N N 409 TYR CA C sing N N 410 TYR CA CB sing N N 411 TYR CA HA sing N N 412 TYR C O doub N N 413 TYR C OXT sing N N 414 TYR CB CG sing N N 415 TYR CB HB2 sing N N 416 TYR CB HB3 sing N N 417 TYR CG CD1 doub Y N 418 TYR CG CD2 sing Y N 419 TYR CD1 CE1 sing Y N 420 TYR CD1 HD1 sing N N 421 TYR CD2 CE2 doub Y N 422 TYR CD2 HD2 sing N N 423 TYR CE1 CZ doub Y N 424 TYR CE1 HE1 sing N N 425 TYR CE2 CZ sing Y N 426 TYR CE2 HE2 sing N N 427 TYR CZ OH sing N N 428 TYR OH HH sing N N 429 TYR OXT HXT sing N N 430 VAL N CA sing N N 431 VAL N H sing N N 432 VAL N H2 sing N N 433 VAL CA C sing N N 434 VAL CA CB sing N N 435 VAL CA HA sing N N 436 VAL C O doub N N 437 VAL C OXT sing N N 438 VAL CB CG1 sing N N 439 VAL CB CG2 sing N N 440 VAL CB HB sing N N 441 VAL CG1 HG11 sing N N 442 VAL CG1 HG12 sing N N 443 VAL CG1 HG13 sing N N 444 VAL CG2 HG21 sing N N 445 VAL CG2 HG22 sing N N 446 VAL CG2 HG23 sing N N 447 VAL OXT HXT sing N N 448 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 A2G 1 B A2G 1 B TFN 251 n B 2 GAL 2 B GAL 2 B TFN 251 n C 2 A2G 1 C A2G 1 C TFN 252 n C 2 GAL 2 C GAL 2 C TFN 252 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-3DGalpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-GalpNAc]{[(3+1)][b-D-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 A2G _pdbx_entity_branch_link.atom_id_2 O3 _pdbx_entity_branch_link.leaving_atom_id_2 HO3 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 A2G 1 n 2 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 P-NITROPHENOL NPO 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2NN8 _pdbx_initial_refinement_model.details 'PDB ENTRY 2NN8' #