data_3B4A # _entry.id 3B4A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3B4A pdb_00003b4a 10.2210/pdb3b4a/pdb NDB UR0126 ? ? RCSB RCSB045060 ? ? WWPDB D_1000045060 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2024-02-21 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' database_PDB_caveat 3 3 'Structure model' entity 4 3 'Structure model' pdbx_chem_comp_identifier 5 3 'Structure model' pdbx_entity_nonpoly 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_conn_type 9 3 'Structure model' struct_ref_seq 10 3 'Structure model' struct_site 11 3 'Structure model' struct_site_gen 12 4 'Structure model' chem_comp 13 4 'Structure model' chem_comp_atom 14 4 'Structure model' chem_comp_bond 15 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.mon_nstd_flag' 2 3 'Structure model' '_chem_comp.name' 3 3 'Structure model' '_chem_comp.type' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.value' 21 3 'Structure model' '_struct_conn.conn_type_id' 22 3 'Structure model' '_struct_conn.id' 23 3 'Structure model' '_struct_conn.pdbx_dist_value' 24 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 3 'Structure model' '_struct_conn_type.id' 40 3 'Structure model' '_struct_ref_seq.db_align_beg' 41 3 'Structure model' '_struct_ref_seq.db_align_end' 42 4 'Structure model' '_chem_comp.pdbx_synonyms' 43 4 'Structure model' '_database_2.pdbx_DOI' 44 4 'Structure model' '_database_2.pdbx_database_accession' # _database_PDB_caveat.id 1 _database_PDB_caveat.text ;C B 57 HAS WRONG CHIRALITY AT ATOM C3' ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3B4A _pdbx_database_status.recvd_initial_deposition_date 2007-10-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2z74 . unspecified PDB 2z75 . unspecified PDB 2ho7 . unspecified PDB 3B4B . unspecified PDB 3B4C . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Klein, D.J.' 1 ;Ferre-D'Amare, A.R. ; 2 # _citation.id primary _citation.title 'Essential Role of an Active-Site Guanine in glmS Ribozyme Catalysis.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 129 _citation.page_first 14858 _citation.page_last 14859 _citation.year 2007 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17990888 _citation.pdbx_database_id_DOI 10.1021/ja0768441 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Klein, D.J.' 1 ? primary 'Been, M.D.' 2 ? primary ;Ferre-D'Amare, A.R. ; 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'glmS ribozyme substrate RNA' 8938.374 1 ? ? ? ? 2 polymer nat 'glmS ribozyme RNA' 40582.070 1 ? G40A ? ? 3 non-polymer man 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose 259.151 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 6 ? ? ? ? 5 water nat water 18.015 3 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no AAGCGCCUGGACUUAAAGCCAUUGCACU AAGCGCCUGGACUUAAAGCCAUUGCACU A ? 2 polyribonucleotide no yes ;CCGGCUUUAAGUUGACGAGAGCAGGGUUUAUCGAGACAUCGGCGGGUGCCCUGCGGUCUUCCUGCGACCGUUAGAGGACU GGUAAAACCACAGGCGACUGUGGCAUAGAGCAGUCCGGGCAGGA(A23) ; ;CCGGCUUUAAGUUGACGAGAGCAGGGUUUAUCGAGACAUCGGCGGGUGCCCUGCGGUCUUCCUGCGACCGUUAGAGGACU GGUAAAACCACAGGCGACUGUGGCAUAGAGCAGUCCGGGCAGGAA ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose GLP 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 A n 1 3 G n 1 4 C n 1 5 G n 1 6 C n 1 7 C n 1 8 U n 1 9 G n 1 10 G n 1 11 A n 1 12 C n 1 13 U n 1 14 U n 1 15 A n 1 16 A n 1 17 A n 1 18 G n 1 19 C n 1 20 C n 1 21 A n 1 22 U n 1 23 U n 1 24 G n 1 25 C n 1 26 A n 1 27 C n 1 28 U n 2 1 C n 2 2 C n 2 3 G n 2 4 G n 2 5 C n 2 6 U n 2 7 U n 2 8 U n 2 9 A n 2 10 A n 2 11 G n 2 12 U n 2 13 U n 2 14 G n 2 15 A n 2 16 C n 2 17 G n 2 18 A n 2 19 G n 2 20 A n 2 21 G n 2 22 C n 2 23 A n 2 24 G n 2 25 G n 2 26 G n 2 27 U n 2 28 U n 2 29 U n 2 30 A n 2 31 U n 2 32 C n 2 33 G n 2 34 A n 2 35 G n 2 36 A n 2 37 C n 2 38 A n 2 39 U n 2 40 C n 2 41 G n 2 42 G n 2 43 C n 2 44 G n 2 45 G n 2 46 G n 2 47 U n 2 48 G n 2 49 C n 2 50 C n 2 51 C n 2 52 U n 2 53 G n 2 54 C n 2 55 G n 2 56 G n 2 57 U n 2 58 C n 2 59 U n 2 60 U n 2 61 C n 2 62 C n 2 63 U n 2 64 G n 2 65 C n 2 66 G n 2 67 A n 2 68 C n 2 69 C n 2 70 G n 2 71 U n 2 72 U n 2 73 A n 2 74 G n 2 75 A n 2 76 G n 2 77 G n 2 78 A n 2 79 C n 2 80 U n 2 81 G n 2 82 G n 2 83 U n 2 84 A n 2 85 A n 2 86 A n 2 87 A n 2 88 C n 2 89 C n 2 90 A n 2 91 C n 2 92 A n 2 93 G n 2 94 G n 2 95 C n 2 96 G n 2 97 A n 2 98 C n 2 99 U n 2 100 G n 2 101 U n 2 102 G n 2 103 G n 2 104 C n 2 105 A n 2 106 U n 2 107 A n 2 108 G n 2 109 A n 2 110 G n 2 111 C n 2 112 A n 2 113 G n 2 114 U n 2 115 C n 2 116 C n 2 117 G n 2 118 G n 2 119 G n 2 120 C n 2 121 A n 2 122 G n 2 123 G n 2 124 A n 2 125 A23 n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Thermoanaerobacter tengcongensis' 119072 Thermoanaerobacter ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'Thermoanaerobacter tengcongensis' 119072 Thermoanaerobacter ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 A23 'RNA linking' n ;ADENOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C10 H13 N5 O9 P2' 409.186 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLP 'D-saccharide, alpha linking' n 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose ;GLUCOSAMINE 6-PHOSPHATE; 6-O-phosphono-alpha-D-glucosamine; 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucose; 2-amino-2-deoxy-6-O-phosphono-D-glucose; 2-amino-2-deoxy-6-O-phosphono-glucose ; 'C6 H14 N O8 P' 259.151 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _pdbx_chem_comp_identifier.comp_id GLP _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier a-D-GlcpN6PO3 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 -2 -2 A A A . n A 1 2 A 2 -1 -1 A A A . n A 1 3 G 3 1 1 G G A . n A 1 4 C 4 2 2 C C A . n A 1 5 G 5 3 3 G G A . n A 1 6 C 6 4 4 C C A . n A 1 7 C 7 5 5 C C A . n A 1 8 U 8 6 6 U U A . n A 1 9 G 9 7 7 G G A . n A 1 10 G 10 8 8 G G A . n A 1 11 A 11 9 9 A A A . n A 1 12 C 12 10 10 C C A . n A 1 13 U 13 11 11 U U A . n A 1 14 U 14 12 12 U U A . n A 1 15 A 15 13 13 A A A . n A 1 16 A 16 14 14 A A A . n A 1 17 A 17 15 15 A A A . n A 1 18 G 18 16 16 G G A . n A 1 19 C 19 17 17 C C A . n A 1 20 C 20 18 18 C C A . n A 1 21 A 21 19 19 A A A . n A 1 22 U 22 20 20 U U A . n A 1 23 U 23 21 ? ? ? A . n A 1 24 G 24 22 ? ? ? A . n A 1 25 C 25 23 ? ? ? A . n A 1 26 A 26 24 ? ? ? A . n A 1 27 C 27 25 ? ? ? A . n A 1 28 U 28 26 ? ? ? A . n B 2 1 C 1 21 ? ? ? B . n B 2 2 C 2 22 ? ? ? B . n B 2 3 G 3 23 23 G G B . n B 2 4 G 4 24 24 G G B . n B 2 5 C 5 25 25 C C B . n B 2 6 U 6 26 26 U U B . n B 2 7 U 7 27 27 U U B . n B 2 8 U 8 28 28 U U B . n B 2 9 A 9 29 29 A A B . n B 2 10 A 10 30 30 A A B . n B 2 11 G 11 31 31 G G B . n B 2 12 U 12 32 32 U U B . n B 2 13 U 13 33 33 U U B . n B 2 14 G 14 34 34 G G B . n B 2 15 A 15 35 35 A A B . n B 2 16 C 16 36 36 C C B . n B 2 17 G 17 37 37 G G B . n B 2 18 A 18 38 38 A A B . n B 2 19 G 19 39 39 G G B . n B 2 20 A 20 40 40 A A B . n B 2 21 G 21 41 41 G G B . n B 2 22 C 22 42 42 C C B . n B 2 23 A 23 43 43 A A B . n B 2 24 G 24 44 44 G G B . n B 2 25 G 25 45 45 G G B . n B 2 26 G 26 46 46 G G B . n B 2 27 U 27 47 47 U U B . n B 2 28 U 28 48 48 U U B . n B 2 29 U 29 49 49 U U B . n B 2 30 A 30 50 50 A A B . n B 2 31 U 31 51 51 U U B . n B 2 32 C 32 52 52 C C B . n B 2 33 G 33 53 53 G G B . n B 2 34 A 34 54 54 A A B . n B 2 35 G 35 55 55 G G B . n B 2 36 A 36 56 56 A A B . n B 2 37 C 37 57 57 C C B . n B 2 38 A 38 58 58 A A B . n B 2 39 U 39 59 59 U U B . n B 2 40 C 40 60 60 C C B . n B 2 41 G 41 61 61 G G B . n B 2 42 G 42 62 62 G G B . n B 2 43 C 43 63 63 C C B . n B 2 44 G 44 64 64 G G B . n B 2 45 G 45 65 65 G G B . n B 2 46 G 46 66 66 G G B . n B 2 47 U 47 67 67 U U B . n B 2 48 G 48 68 68 G G B . n B 2 49 C 49 69 69 C C B . n B 2 50 C 50 70 70 C C B . n B 2 51 C 51 71 71 C C B . n B 2 52 U 52 72 72 U U B . n B 2 53 G 53 73 73 G G B . n B 2 54 C 54 74 74 C C B . n B 2 55 G 55 75 75 G G B . n B 2 56 G 56 76 76 G G B . n B 2 57 U 57 77 77 U U B . n B 2 58 C 58 78 78 C C B . n B 2 59 U 59 79 ? ? ? B . n B 2 60 U 60 80 80 U U B . n B 2 61 C 61 81 81 C C B . n B 2 62 C 62 82 82 C C B . n B 2 63 U 63 83 83 U U B . n B 2 64 G 64 84 84 G G B . n B 2 65 C 65 85 85 C C B . n B 2 66 G 66 86 86 G G B . n B 2 67 A 67 87 87 A A B . n B 2 68 C 68 88 88 C C B . n B 2 69 C 69 89 89 C C B . n B 2 70 G 70 90 90 G G B . n B 2 71 U 71 91 91 U U B . n B 2 72 U 72 92 92 U U B . n B 2 73 A 73 93 93 A A B . n B 2 74 G 74 94 94 G G B . n B 2 75 A 75 95 95 A A B . n B 2 76 G 76 96 96 G G B . n B 2 77 G 77 97 97 G G B . n B 2 78 A 78 98 98 A A B . n B 2 79 C 79 99 99 C C B . n B 2 80 U 80 100 100 U U B . n B 2 81 G 81 101 101 G G B . n B 2 82 G 82 102 102 G G B . n B 2 83 U 83 103 103 U U B . n B 2 84 A 84 104 104 A A B . n B 2 85 A 85 105 105 A A B . n B 2 86 A 86 106 106 A A B . n B 2 87 A 87 107 107 A A B . n B 2 88 C 88 108 108 C C B . n B 2 89 C 89 109 109 C C B . n B 2 90 A 90 110 110 A A B . n B 2 91 C 91 111 111 C C B . n B 2 92 A 92 112 112 A A B . n B 2 93 G 93 113 113 G G B . n B 2 94 G 94 114 114 G G B . n B 2 95 C 95 115 115 C C B . n B 2 96 G 96 116 116 G G B . n B 2 97 A 97 117 117 A A B . n B 2 98 C 98 118 118 C C B . n B 2 99 U 99 119 119 U U B . n B 2 100 G 100 120 120 G G B . n B 2 101 U 101 121 121 U U B . n B 2 102 G 102 122 122 G G B . n B 2 103 G 103 123 123 G G B . n B 2 104 C 104 124 124 C C B . n B 2 105 A 105 125 125 A A B . n B 2 106 U 106 126 126 U U B . n B 2 107 A 107 127 127 A A B . n B 2 108 G 108 128 128 G G B . n B 2 109 A 109 129 129 A A B . n B 2 110 G 110 130 130 G G B . n B 2 111 C 111 131 131 C C B . n B 2 112 A 112 132 132 A A B . n B 2 113 G 113 133 133 G G B . n B 2 114 U 114 134 134 U U B . n B 2 115 C 115 135 135 C C B . n B 2 116 C 116 136 136 C C B . n B 2 117 G 117 137 137 G G B . n B 2 118 G 118 138 138 G G B . n B 2 119 G 119 139 139 G G B . n B 2 120 C 120 140 140 C C B . n B 2 121 A 121 141 141 A A B . n B 2 122 G 122 142 142 G G B . n B 2 123 G 123 143 143 G G B . n B 2 124 A 124 144 144 A A B . n B 2 125 A23 125 145 145 A23 A B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GLP 1 401 401 GLP GLP A . D 4 MG 1 204 204 MG MG A . E 4 MG 1 201 201 MG MG B . F 4 MG 1 202 202 MG MG B . G 4 MG 1 203 203 MG MG B . H 4 MG 1 205 205 MG MG B . I 4 MG 1 206 206 MG MG B . J 5 HOH 1 301 301 HOH HOH A . J 5 HOH 2 302 302 HOH HOH A . K 5 HOH 1 303 303 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A U 6 ? N1 ? A U 8 N1 2 1 Y 1 A U 6 ? C2 ? A U 8 C2 3 1 Y 1 A U 6 ? O2 ? A U 8 O2 4 1 Y 1 A U 6 ? N3 ? A U 8 N3 5 1 Y 1 A U 6 ? C4 ? A U 8 C4 6 1 Y 1 A U 6 ? O4 ? A U 8 O4 7 1 Y 1 A U 6 ? C5 ? A U 8 C5 8 1 Y 1 A U 6 ? C6 ? A U 8 C6 9 1 Y 1 B U 103 ? N1 ? B U 83 N1 10 1 Y 1 B U 103 ? C2 ? B U 83 C2 11 1 Y 1 B U 103 ? O2 ? B U 83 O2 12 1 Y 1 B U 103 ? N3 ? B U 83 N3 13 1 Y 1 B U 103 ? C4 ? B U 83 C4 14 1 Y 1 B U 103 ? O4 ? B U 83 O4 15 1 Y 1 B U 103 ? C5 ? B U 83 C5 16 1 Y 1 B U 103 ? C6 ? B U 83 C6 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 3B4A _cell.length_a 177.154 _cell.length_b 41.692 _cell.length_c 77.699 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3B4A _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 3B4A _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.90 _exptl_crystal.density_percent_sol 57.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details ;GROWN FROM: 12% PEG 4000, 1M LICL, 100MM MES-NAOH PH 5.4, 5MM MGCL2, STABILIZED IN: 24% PEG 4000, 1.5M LICL, 30MM MGCL2, 100MM MES-NAOH PH 5.5, 20MM GLUCOSAMINE-6-PHOSPHATE, VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 2 'PEG 4000' ? ? ? 1 2 2 LICL ? ? ? 1 3 2 'MES-NAOH PH 5.4' ? ? ? 1 4 2 MGCL2 ? ? ? 1 5 3 'PEG 4000' ? ? ? 1 6 3 LICL ? ? ? 1 7 3 MGCL2 ? ? ? 1 8 3 'MES-NAOH PH 5.5' ? ? ? 1 9 3 GLUCOSAMINE-6-PHOSPHATE ? ? ? 1 10 1 'PEG 4000' ? ? ? 1 11 1 LICL ? ? ? 1 12 1 'MES-NAOH PH 5.4' ? ? ? 1 13 1 MGCL2 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-09-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3B4A _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.70 _reflns.d_resolution_low 30 _reflns.number_all 16141 _reflns.number_obs 16141 _reflns.percent_possible_obs 97.2 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value 0.083 _reflns.pdbx_netI_over_sigmaI 25.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 93.6 _reflns_shell.Rmerge_I_obs 0.933 _reflns_shell.pdbx_Rsym_value 0.933 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1537 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3B4A _refine.ls_d_res_high 2.7 _refine.ls_d_res_low 30 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 15548 _refine.ls_number_reflns_obs 15548 _refine.ls_number_reflns_R_free 1514 _refine.ls_percent_reflns_obs 93.8 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.246 _refine.ls_R_factor_R_free 0.275 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3B4A _refine_analyze.Luzzati_coordinate_error_obs 0.40 _refine_analyze.Luzzati_sigma_a_obs 0.48 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.47 _refine_analyze.Luzzati_sigma_a_free 0.54 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3078 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 3103 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.004632 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 1.182 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 3B4A _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3B4A _struct.title 'T. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3B4A _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'ribozyme, riboswitch, glucosamine-6-phosphate, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 3B4A 1 AAGCGCCUGGACUUAAAGCCAUUGCACU 1 3B4A ? 2 PDB 3B4A 2 ;CCGGCUUUAAGUUGACGAGAGCAGGGUUUAUCGAGACAUCGGCGGGUGCCCUGCGGUCUUCCUGCGACCGUUAGAGGACU GGUAAAACCACAGGCGACUGUGGCAUAGAGCAGUCCGGGCAGGAA ; 1 3B4A ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3B4A A 1 ? 28 ? 3B4A -2 ? 26 ? -2 26 2 2 3B4A B 1 ? 125 ? 3B4A 21 ? 145 ? 21 145 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 4370 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a monomer' # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B A 124 "O3'" ? ? ? 1_555 B A23 125 P ? ? B A 144 B A23 145 1_555 ? ? ? ? ? ? ? 1.607 ? ? metalc1 metalc ? ? A C 4 OP2 ? ? ? 1_555 E MG . MG ? ? A C 2 B MG 201 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc2 metalc ? ? J HOH . O ? ? ? 1_555 E MG . MG ? ? A HOH 301 B MG 201 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc3 metalc ? ? J HOH . O ? ? ? 1_555 E MG . MG ? ? A HOH 302 B MG 201 1_555 ? ? ? ? ? ? ? 1.836 ? ? metalc4 metalc ? ? B C 16 OP2 ? ? ? 1_555 E MG . MG ? ? B C 36 B MG 201 1_555 ? ? ? ? ? ? ? 2.415 ? ? hydrog1 hydrog ? ? A C 4 N3 ? ? ? 1_555 B G 44 N1 ? ? A C 2 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 4 N4 ? ? ? 1_555 B G 44 O6 ? ? A C 2 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 4 O2 ? ? ? 1_555 B G 44 N2 ? ? A C 2 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 5 N1 ? ? ? 1_555 B C 43 N3 ? ? A G 3 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 5 N2 ? ? ? 1_555 B C 43 O2 ? ? A G 3 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 5 O6 ? ? ? 1_555 B C 43 N4 ? ? A G 3 B C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 42 N1 ? ? A C 4 B G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 42 O6 ? ? A C 4 B G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 42 N2 ? ? A C 4 B G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 41 N1 ? ? A C 5 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 41 O6 ? ? A C 5 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 41 N2 ? ? A C 5 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 9 O6 ? ? ? 1_555 B G 14 N2 ? ? A G 7 B G 34 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog14 hydrog ? ? A G 9 N1 ? ? ? 1_555 B C 40 N3 ? ? A G 7 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 9 N2 ? ? ? 1_555 B C 40 O2 ? ? A G 7 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 9 O6 ? ? ? 1_555 B C 40 N4 ? ? A G 7 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 10 O6 ? ? ? 1_555 B U 13 N3 ? ? A G 8 B U 33 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog18 hydrog ? ? A A 11 N1 ? ? ? 1_555 B U 12 N3 ? ? A A 9 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 11 N6 ? ? ? 1_555 B U 12 O4 ? ? A A 9 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 12 N3 ? ? ? 1_555 B G 11 N1 ? ? A C 10 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 12 N4 ? ? ? 1_555 B G 11 O6 ? ? A C 10 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 12 O2 ? ? ? 1_555 B G 11 N2 ? ? A C 10 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 13 N3 ? ? ? 1_555 B A 10 N1 ? ? A U 11 B A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 13 O4 ? ? ? 1_555 B A 10 N6 ? ? A U 11 B A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 13 O2 ? ? ? 1_555 B G 96 N2 ? ? A U 11 B G 116 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog26 hydrog ? ? A U 14 N3 ? ? ? 1_555 B A 9 N1 ? ? A U 12 B A 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A U 14 O4 ? ? ? 1_555 B A 9 N6 ? ? A U 12 B A 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A A 15 N1 ? ? ? 1_555 B U 8 N3 ? ? A A 13 B U 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A A 15 N6 ? ? ? 1_555 B U 8 O4 ? ? A A 13 B U 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 16 N1 ? ? ? 1_555 B U 7 N3 ? ? A A 14 B U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A A 16 N6 ? ? ? 1_555 B U 7 O4 ? ? A A 14 B U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A A 17 N1 ? ? ? 1_555 B U 6 N3 ? ? A A 15 B U 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A A 17 N6 ? ? ? 1_555 B U 6 O4 ? ? A A 15 B U 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 18 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 16 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 18 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 16 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 18 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 16 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 19 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 17 B G 24 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog38 hydrog ? ? B G 11 N2 ? ? ? 1_555 B A 97 N3 ? ? B G 31 B A 117 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog39 hydrog ? ? B A 15 N3 ? ? ? 1_555 B C 16 N4 ? ? B A 35 B C 36 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog40 hydrog ? ? B C 16 N3 ? ? ? 1_555 B G 33 N1 ? ? B C 36 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B C 16 N4 ? ? ? 1_555 B G 33 O6 ? ? B C 36 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 16 O2 ? ? ? 1_555 B G 33 N2 ? ? B C 36 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 32 N3 ? ? B G 37 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 32 O2 ? ? B G 37 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 32 N4 ? ? B G 37 B C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B G 17 N2 ? ? ? 1_555 B A 107 N1 ? ? B G 37 B A 127 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog47 hydrog ? ? B A 18 N1 ? ? ? 1_555 B U 31 N3 ? ? B A 38 B U 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B A 18 N6 ? ? ? 1_555 B U 31 O4 ? ? B A 38 B U 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B A 18 N3 ? ? ? 1_555 B G 108 N2 ? ? B A 38 B G 128 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog50 hydrog ? ? B C 22 N3 ? ? ? 1_555 B G 53 N1 ? ? B C 42 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B C 22 N4 ? ? ? 1_555 B G 53 O6 ? ? B C 42 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B C 22 O2 ? ? ? 1_555 B G 53 N2 ? ? B C 42 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B A 23 N1 ? ? ? 1_555 B U 52 N3 ? ? B A 43 B U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B A 23 N6 ? ? ? 1_555 B U 52 O4 ? ? B A 43 B U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B G 24 N1 ? ? ? 1_555 B C 51 N3 ? ? B G 44 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B G 24 N2 ? ? ? 1_555 B C 51 O2 ? ? B G 44 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B G 24 O6 ? ? ? 1_555 B C 51 N4 ? ? B G 44 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B G 25 N1 ? ? ? 1_555 B C 50 N3 ? ? B G 45 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B G 25 N2 ? ? ? 1_555 B C 50 O2 ? ? B G 45 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B G 25 O6 ? ? ? 1_555 B C 50 N4 ? ? B G 45 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 26 N1 ? ? ? 1_555 B C 49 N3 ? ? B G 46 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B G 26 N2 ? ? ? 1_555 B C 49 O2 ? ? B G 46 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B G 26 O6 ? ? ? 1_555 B C 49 N4 ? ? B G 46 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B U 27 N3 ? ? ? 1_555 B G 48 O6 ? ? B U 47 B G 68 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog65 hydrog ? ? B U 27 O2 ? ? ? 1_555 B G 48 N1 ? ? B U 47 B G 68 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog66 hydrog ? ? B U 28 N3 ? ? ? 1_555 B A 30 N7 ? ? B U 48 B A 50 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog67 hydrog ? ? B U 28 O4 ? ? ? 1_555 B A 30 N6 ? ? B U 48 B A 50 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog68 hydrog ? ? B G 33 N2 ? ? ? 1_555 B A 84 N1 ? ? B G 53 B A 104 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog69 hydrog ? ? B A 34 N1 ? ? ? 1_555 B U 39 N3 ? ? B A 54 B U 59 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog70 hydrog ? ? B A 34 N6 ? ? ? 1_555 B U 39 O2 ? ? B A 54 B U 59 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog71 hydrog ? ? B C 54 N3 ? ? ? 1_555 B G 70 N1 ? ? B C 74 B G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B C 54 N4 ? ? ? 1_555 B G 70 O6 ? ? B C 74 B G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B C 54 O2 ? ? ? 1_555 B G 70 N2 ? ? B C 74 B G 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B G 55 N1 ? ? ? 1_555 B C 69 N3 ? ? B G 75 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B G 55 N2 ? ? ? 1_555 B C 69 O2 ? ? B G 75 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B G 55 O6 ? ? ? 1_555 B C 69 N4 ? ? B G 75 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B G 55 N2 ? ? ? 1_555 B A 73 N3 ? ? B G 75 B A 93 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog78 hydrog ? ? B G 56 N1 ? ? ? 1_555 B C 68 N3 ? ? B G 76 B C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B G 56 N2 ? ? ? 1_555 B C 68 O2 ? ? B G 76 B C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B G 56 O6 ? ? ? 1_555 B C 68 N4 ? ? B G 76 B C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B U 57 N3 ? ? ? 1_555 B A 67 N1 ? ? B U 77 B A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B U 57 O4 ? ? ? 1_555 B A 67 N6 ? ? B U 77 B A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B C 58 N3 ? ? ? 1_555 B G 66 N1 ? ? B C 78 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B C 58 N4 ? ? ? 1_555 B G 66 O6 ? ? B C 78 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B C 58 O2 ? ? ? 1_555 B G 66 N2 ? ? B C 78 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 61 N4 ? ? ? 1_555 B G 123 O6 ? ? B C 81 B G 143 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog87 hydrog ? ? B C 62 N3 ? ? ? 1_555 B G 122 N1 ? ? B C 82 B G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B C 62 N4 ? ? ? 1_555 B G 122 O6 ? ? B C 82 B G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B C 62 O2 ? ? ? 1_555 B G 122 N2 ? ? B C 82 B G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B U 63 N3 ? ? ? 1_555 B A 121 N1 ? ? B U 83 B A 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B U 63 O4 ? ? ? 1_555 B A 121 N6 ? ? B U 83 B A 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 64 N1 ? ? ? 1_555 B C 120 N3 ? ? B G 84 B C 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 64 N2 ? ? ? 1_555 B C 120 O2 ? ? B G 84 B C 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 64 O6 ? ? ? 1_555 B C 120 N4 ? ? B G 84 B C 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B C 65 N3 ? ? ? 1_555 B G 119 N1 ? ? B C 85 B G 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B C 65 N4 ? ? ? 1_555 B G 119 O6 ? ? B C 85 B G 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B C 65 O2 ? ? ? 1_555 B G 119 N2 ? ? B C 85 B G 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B A 75 N6 ? ? ? 1_555 B G 117 N3 ? ? B A 95 B G 137 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog99 hydrog ? ? B A 75 N7 ? ? ? 1_555 B G 117 N2 ? ? B A 95 B G 137 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog100 hydrog ? ? B G 76 N1 ? ? ? 1_555 B C 116 O2 ? ? B G 96 B C 136 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog101 hydrog ? ? B G 77 N1 ? ? ? 1_555 B C 115 O2 ? ? B G 97 B C 135 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog102 hydrog ? ? B A 78 N1 ? ? ? 1_555 B U 114 N3 ? ? B A 98 B U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B A 78 N6 ? ? ? 1_555 B U 114 O4 ? ? B A 98 B U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 79 N3 ? ? ? 1_555 B G 113 N1 ? ? B C 99 B G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 79 N4 ? ? ? 1_555 B G 113 O6 ? ? B C 99 B G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B C 79 O2 ? ? ? 1_555 B G 113 N2 ? ? B C 99 B G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B U 80 N3 ? ? ? 1_555 B A 112 N1 ? ? B U 100 B A 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B U 80 O4 ? ? ? 1_555 B A 112 N6 ? ? B U 100 B A 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B G 81 N1 ? ? ? 1_555 B C 111 N3 ? ? B G 101 B C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B G 81 N2 ? ? ? 1_555 B C 111 O2 ? ? B G 101 B C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B G 81 O6 ? ? ? 1_555 B C 111 N4 ? ? B G 101 B C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B G 82 N2 ? ? ? 1_555 B A 109 N7 ? ? B G 102 B A 129 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog113 hydrog ? ? B A 85 N6 ? ? ? 1_555 B U 106 O2 ? ? B A 105 B U 126 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog114 hydrog ? ? B A 85 N7 ? ? ? 1_555 B U 106 N3 ? ? B A 105 B U 126 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog115 hydrog ? ? B A 86 N6 ? ? ? 1_555 B A 105 N1 ? ? B A 106 B A 125 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog116 hydrog ? ? B A 86 N7 ? ? ? 1_555 B A 105 N6 ? ? B A 106 B A 125 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog117 hydrog ? ? B A 87 N6 ? ? ? 1_555 B C 104 O2 ? ? B A 107 B C 124 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog118 hydrog ? ? B C 88 N3 ? ? ? 1_555 B G 103 N1 ? ? B C 108 B G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B C 88 N4 ? ? ? 1_555 B G 103 O6 ? ? B C 108 B G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B C 88 O2 ? ? ? 1_555 B G 103 N2 ? ? B C 108 B G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B C 89 N3 ? ? ? 1_555 B G 102 N1 ? ? B C 109 B G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B C 89 N4 ? ? ? 1_555 B G 102 O6 ? ? B C 109 B G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B C 89 O2 ? ? ? 1_555 B G 102 N2 ? ? B C 109 B G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B A 90 N1 ? ? ? 1_555 B U 101 N3 ? ? B A 110 B U 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B A 90 N6 ? ? ? 1_555 B U 101 O4 ? ? B A 110 B U 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B C 91 N3 ? ? ? 1_555 B G 100 N1 ? ? B C 111 B G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B C 91 N4 ? ? ? 1_555 B G 100 O6 ? ? B C 111 B G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B C 91 O2 ? ? ? 1_555 B G 100 N2 ? ? B C 111 B G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B A 92 N1 ? ? ? 1_555 B U 99 N3 ? ? B A 112 B U 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B A 92 N6 ? ? ? 1_555 B U 99 O4 ? ? B A 112 B U 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B G 93 N1 ? ? ? 1_555 B C 98 N3 ? ? B G 113 B C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B G 93 N2 ? ? ? 1_555 B C 98 O2 ? ? B G 113 B C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B G 93 O6 ? ? ? 1_555 B C 98 N4 ? ? B G 113 B C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B G 94 N2 ? ? ? 1_555 B A 97 N7 ? ? B G 114 B A 117 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A C 4 ? A C 2 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O ? J HOH . ? A HOH 301 ? 1_555 93.9 ? 2 OP2 ? A C 4 ? A C 2 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O ? J HOH . ? A HOH 302 ? 1_555 80.6 ? 3 O ? J HOH . ? A HOH 301 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O ? J HOH . ? A HOH 302 ? 1_555 164.8 ? 4 OP2 ? A C 4 ? A C 2 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 OP2 ? B C 16 ? B C 36 ? 1_555 165.0 ? 5 O ? J HOH . ? A HOH 301 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 OP2 ? B C 16 ? B C 36 ? 1_555 91.4 ? 6 O ? J HOH . ? A HOH 302 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 OP2 ? B C 16 ? B C 36 ? 1_555 90.7 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C2'" B U 49 ? ? "C3'" B U 49 ? ? "O3'" B U 49 ? ? 125.13 113.70 11.43 1.60 N 2 1 N9 B G 55 ? ? "C1'" B G 55 ? ? "C2'" B G 55 ? ? 122.61 114.00 8.61 1.30 N 3 1 "C2'" B C 57 ? ? "C3'" B C 57 ? ? "O3'" B C 57 ? ? 128.97 113.70 15.27 1.60 N 4 1 "C2'" B U 103 ? ? "C3'" B U 103 ? ? "O3'" B U 103 ? ? 126.76 113.70 13.06 1.60 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C3'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id C _pdbx_validate_chiral.auth_seq_id 57 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G B 55 ? ? 0.064 'SIDE CHAIN' 2 1 G B 114 ? ? 0.056 'SIDE CHAIN' 3 1 A B 127 ? ? 0.054 'SIDE CHAIN' # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id A23 _pdbx_struct_mod_residue.label_seq_id 125 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id A23 _pdbx_struct_mod_residue.auth_seq_id 145 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id A _pdbx_struct_mod_residue.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A U 21 ? A U 23 2 1 Y 1 A G 22 ? A G 24 3 1 Y 1 A C 23 ? A C 25 4 1 Y 1 A A 24 ? A A 26 5 1 Y 1 A C 25 ? A C 27 6 1 Y 1 A U 26 ? A U 28 7 1 Y 1 B C 21 ? B C 1 8 1 Y 1 B C 22 ? B C 2 9 1 Y 1 B U 79 ? B U 59 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 A23 PC P N S 38 A23 O1C O N N 39 A23 O2C O N N 40 A23 P P N N 41 A23 OP1 O N N 42 A23 OP2 O N N 43 A23 OP3 O N N 44 A23 "O5'" O N N 45 A23 "C5'" C N N 46 A23 "C4'" C N R 47 A23 "O4'" O N N 48 A23 "C3'" C N R 49 A23 "O3'" O N N 50 A23 "C2'" C N R 51 A23 "O2'" O N N 52 A23 "C1'" C N R 53 A23 N9 N Y N 54 A23 C8 C Y N 55 A23 N7 N Y N 56 A23 C5 C Y N 57 A23 C6 C Y N 58 A23 N6 N N N 59 A23 N1 N Y N 60 A23 C2 C Y N 61 A23 N3 N Y N 62 A23 C4 C Y N 63 A23 HOC2 H N N 64 A23 HOP2 H N N 65 A23 HOP3 H N N 66 A23 "H5'" H N N 67 A23 "H5''" H N N 68 A23 "H4'" H N N 69 A23 "H3'" H N N 70 A23 "H2'" H N N 71 A23 "H1'" H N N 72 A23 H8 H N N 73 A23 HN61 H N N 74 A23 HN62 H N N 75 A23 H2 H N N 76 C OP3 O N N 77 C P P N N 78 C OP1 O N N 79 C OP2 O N N 80 C "O5'" O N N 81 C "C5'" C N N 82 C "C4'" C N R 83 C "O4'" O N N 84 C "C3'" C N S 85 C "O3'" O N N 86 C "C2'" C N R 87 C "O2'" O N N 88 C "C1'" C N R 89 C N1 N N N 90 C C2 C N N 91 C O2 O N N 92 C N3 N N N 93 C C4 C N N 94 C N4 N N N 95 C C5 C N N 96 C C6 C N N 97 C HOP3 H N N 98 C HOP2 H N N 99 C "H5'" H N N 100 C "H5''" H N N 101 C "H4'" H N N 102 C "H3'" H N N 103 C "HO3'" H N N 104 C "H2'" H N N 105 C "HO2'" H N N 106 C "H1'" H N N 107 C H41 H N N 108 C H42 H N N 109 C H5 H N N 110 C H6 H N N 111 G OP3 O N N 112 G P P N N 113 G OP1 O N N 114 G OP2 O N N 115 G "O5'" O N N 116 G "C5'" C N N 117 G "C4'" C N R 118 G "O4'" O N N 119 G "C3'" C N S 120 G "O3'" O N N 121 G "C2'" C N R 122 G "O2'" O N N 123 G "C1'" C N R 124 G N9 N Y N 125 G C8 C Y N 126 G N7 N Y N 127 G C5 C Y N 128 G C6 C N N 129 G O6 O N N 130 G N1 N N N 131 G C2 C N N 132 G N2 N N N 133 G N3 N N N 134 G C4 C Y N 135 G HOP3 H N N 136 G HOP2 H N N 137 G "H5'" H N N 138 G "H5''" H N N 139 G "H4'" H N N 140 G "H3'" H N N 141 G "HO3'" H N N 142 G "H2'" H N N 143 G "HO2'" H N N 144 G "H1'" H N N 145 G H8 H N N 146 G H1 H N N 147 G H21 H N N 148 G H22 H N N 149 GLP C1 C N S 150 GLP C2 C N R 151 GLP C3 C N R 152 GLP C4 C N S 153 GLP C5 C N R 154 GLP C6 C N N 155 GLP O1 O N N 156 GLP N2 N N N 157 GLP O3 O N N 158 GLP O4 O N N 159 GLP O5 O N N 160 GLP O6 O N N 161 GLP P P N N 162 GLP O1P O N N 163 GLP O2P O N N 164 GLP O3P O N N 165 GLP H1 H N N 166 GLP H2 H N N 167 GLP H3 H N N 168 GLP H4 H N N 169 GLP H5 H N N 170 GLP H61 H N N 171 GLP H62 H N N 172 GLP HO1 H N N 173 GLP HN21 H N N 174 GLP HN22 H N N 175 GLP HO3 H N N 176 GLP HO4 H N N 177 GLP HOP2 H N N 178 GLP HOP3 H N N 179 HOH O O N N 180 HOH H1 H N N 181 HOH H2 H N N 182 MG MG MG N N 183 U OP3 O N N 184 U P P N N 185 U OP1 O N N 186 U OP2 O N N 187 U "O5'" O N N 188 U "C5'" C N N 189 U "C4'" C N R 190 U "O4'" O N N 191 U "C3'" C N S 192 U "O3'" O N N 193 U "C2'" C N R 194 U "O2'" O N N 195 U "C1'" C N R 196 U N1 N N N 197 U C2 C N N 198 U O2 O N N 199 U N3 N N N 200 U C4 C N N 201 U O4 O N N 202 U C5 C N N 203 U C6 C N N 204 U HOP3 H N N 205 U HOP2 H N N 206 U "H5'" H N N 207 U "H5''" H N N 208 U "H4'" H N N 209 U "H3'" H N N 210 U "HO3'" H N N 211 U "H2'" H N N 212 U "HO2'" H N N 213 U "H1'" H N N 214 U H3 H N N 215 U H5 H N N 216 U H6 H N N 217 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 A23 PC O1C doub N N 40 A23 PC O2C sing N N 41 A23 PC "O3'" sing N N 42 A23 PC "O2'" sing N N 43 A23 O2C HOC2 sing N N 44 A23 P OP1 doub N N 45 A23 P OP2 sing N N 46 A23 P OP3 sing N N 47 A23 P "O5'" sing N N 48 A23 OP2 HOP2 sing N N 49 A23 OP3 HOP3 sing N N 50 A23 "O5'" "C5'" sing N N 51 A23 "C5'" "C4'" sing N N 52 A23 "C5'" "H5'" sing N N 53 A23 "C5'" "H5''" sing N N 54 A23 "C4'" "O4'" sing N N 55 A23 "C4'" "C3'" sing N N 56 A23 "C4'" "H4'" sing N N 57 A23 "O4'" "C1'" sing N N 58 A23 "C3'" "O3'" sing N N 59 A23 "C3'" "C2'" sing N N 60 A23 "C3'" "H3'" sing N N 61 A23 "C2'" "O2'" sing N N 62 A23 "C2'" "C1'" sing N N 63 A23 "C2'" "H2'" sing N N 64 A23 "C1'" N9 sing N N 65 A23 "C1'" "H1'" sing N N 66 A23 N9 C8 sing Y N 67 A23 N9 C4 sing Y N 68 A23 C8 N7 doub Y N 69 A23 C8 H8 sing N N 70 A23 N7 C5 sing Y N 71 A23 C5 C6 sing Y N 72 A23 C5 C4 doub Y N 73 A23 C6 N6 sing N N 74 A23 C6 N1 doub Y N 75 A23 N6 HN61 sing N N 76 A23 N6 HN62 sing N N 77 A23 N1 C2 sing Y N 78 A23 C2 N3 doub Y N 79 A23 C2 H2 sing N N 80 A23 N3 C4 sing Y N 81 C OP3 P sing N N 82 C OP3 HOP3 sing N N 83 C P OP1 doub N N 84 C P OP2 sing N N 85 C P "O5'" sing N N 86 C OP2 HOP2 sing N N 87 C "O5'" "C5'" sing N N 88 C "C5'" "C4'" sing N N 89 C "C5'" "H5'" sing N N 90 C "C5'" "H5''" sing N N 91 C "C4'" "O4'" sing N N 92 C "C4'" "C3'" sing N N 93 C "C4'" "H4'" sing N N 94 C "O4'" "C1'" sing N N 95 C "C3'" "O3'" sing N N 96 C "C3'" "C2'" sing N N 97 C "C3'" "H3'" sing N N 98 C "O3'" "HO3'" sing N N 99 C "C2'" "O2'" sing N N 100 C "C2'" "C1'" sing N N 101 C "C2'" "H2'" sing N N 102 C "O2'" "HO2'" sing N N 103 C "C1'" N1 sing N N 104 C "C1'" "H1'" sing N N 105 C N1 C2 sing N N 106 C N1 C6 sing N N 107 C C2 O2 doub N N 108 C C2 N3 sing N N 109 C N3 C4 doub N N 110 C C4 N4 sing N N 111 C C4 C5 sing N N 112 C N4 H41 sing N N 113 C N4 H42 sing N N 114 C C5 C6 doub N N 115 C C5 H5 sing N N 116 C C6 H6 sing N N 117 G OP3 P sing N N 118 G OP3 HOP3 sing N N 119 G P OP1 doub N N 120 G P OP2 sing N N 121 G P "O5'" sing N N 122 G OP2 HOP2 sing N N 123 G "O5'" "C5'" sing N N 124 G "C5'" "C4'" sing N N 125 G "C5'" "H5'" sing N N 126 G "C5'" "H5''" sing N N 127 G "C4'" "O4'" sing N N 128 G "C4'" "C3'" sing N N 129 G "C4'" "H4'" sing N N 130 G "O4'" "C1'" sing N N 131 G "C3'" "O3'" sing N N 132 G "C3'" "C2'" sing N N 133 G "C3'" "H3'" sing N N 134 G "O3'" "HO3'" sing N N 135 G "C2'" "O2'" sing N N 136 G "C2'" "C1'" sing N N 137 G "C2'" "H2'" sing N N 138 G "O2'" "HO2'" sing N N 139 G "C1'" N9 sing N N 140 G "C1'" "H1'" sing N N 141 G N9 C8 sing Y N 142 G N9 C4 sing Y N 143 G C8 N7 doub Y N 144 G C8 H8 sing N N 145 G N7 C5 sing Y N 146 G C5 C6 sing N N 147 G C5 C4 doub Y N 148 G C6 O6 doub N N 149 G C6 N1 sing N N 150 G N1 C2 sing N N 151 G N1 H1 sing N N 152 G C2 N2 sing N N 153 G C2 N3 doub N N 154 G N2 H21 sing N N 155 G N2 H22 sing N N 156 G N3 C4 sing N N 157 GLP C1 C2 sing N N 158 GLP C1 O1 sing N N 159 GLP C1 O5 sing N N 160 GLP C1 H1 sing N N 161 GLP C2 C3 sing N N 162 GLP C2 N2 sing N N 163 GLP C2 H2 sing N N 164 GLP C3 C4 sing N N 165 GLP C3 O3 sing N N 166 GLP C3 H3 sing N N 167 GLP C4 C5 sing N N 168 GLP C4 O4 sing N N 169 GLP C4 H4 sing N N 170 GLP C5 C6 sing N N 171 GLP C5 O5 sing N N 172 GLP C5 H5 sing N N 173 GLP C6 O6 sing N N 174 GLP C6 H61 sing N N 175 GLP C6 H62 sing N N 176 GLP O1 HO1 sing N N 177 GLP N2 HN21 sing N N 178 GLP N2 HN22 sing N N 179 GLP O3 HO3 sing N N 180 GLP O4 HO4 sing N N 181 GLP O6 P sing N N 182 GLP P O1P doub N N 183 GLP P O2P sing N N 184 GLP P O3P sing N N 185 GLP O2P HOP2 sing N N 186 GLP O3P HOP3 sing N N 187 HOH O H1 sing N N 188 HOH O H2 sing N N 189 U OP3 P sing N N 190 U OP3 HOP3 sing N N 191 U P OP1 doub N N 192 U P OP2 sing N N 193 U P "O5'" sing N N 194 U OP2 HOP2 sing N N 195 U "O5'" "C5'" sing N N 196 U "C5'" "C4'" sing N N 197 U "C5'" "H5'" sing N N 198 U "C5'" "H5''" sing N N 199 U "C4'" "O4'" sing N N 200 U "C4'" "C3'" sing N N 201 U "C4'" "H4'" sing N N 202 U "O4'" "C1'" sing N N 203 U "C3'" "O3'" sing N N 204 U "C3'" "C2'" sing N N 205 U "C3'" "H3'" sing N N 206 U "O3'" "HO3'" sing N N 207 U "C2'" "O2'" sing N N 208 U "C2'" "C1'" sing N N 209 U "C2'" "H2'" sing N N 210 U "O2'" "HO2'" sing N N 211 U "C1'" N1 sing N N 212 U "C1'" "H1'" sing N N 213 U N1 C2 sing N N 214 U N1 C6 sing N N 215 U C2 O2 doub N N 216 U C2 N3 sing N N 217 U N3 C4 sing N N 218 U N3 H3 sing N N 219 U C4 O4 doub N N 220 U C4 C5 sing N N 221 U C5 C6 doub N N 222 U C5 H5 sing N N 223 U C6 H6 sing N N 224 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3B4A 'double helix' 3B4A 'a-form double helix' 3B4A 'mismatched base pair' 3B4A 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 4 1_555 B G 44 1_555 0.255 0.113 0.049 2.594 -4.470 4.525 1 A_C2:G64_B A 2 ? B 64 ? 19 1 1 A G 5 1_555 B C 43 1_555 -0.441 0.057 0.107 0.980 -4.988 3.235 2 A_G3:C63_B A 3 ? B 63 ? 19 1 1 A C 6 1_555 B G 42 1_555 -0.129 -0.107 -0.195 4.510 -8.786 0.929 3 A_C4:G62_B A 4 ? B 62 ? 19 1 1 A C 7 1_555 B G 41 1_555 0.206 -0.058 0.072 -0.332 0.402 4.511 4 A_C5:G61_B A 5 ? B 61 ? 19 1 1 A G 9 1_555 B C 40 1_555 -0.175 0.145 -0.224 -1.444 1.614 3.079 5 A_G7:C60_B A 7 ? B 60 ? 19 1 1 A G 10 1_555 B U 13 1_555 -2.068 0.034 0.254 27.028 -10.468 -19.177 6 A_G8:U33_B A 8 ? B 33 ? ? ? 1 A A 11 1_555 B U 12 1_555 0.094 -0.144 0.292 15.181 -13.251 -4.468 7 A_A9:U32_B A 9 ? B 32 ? 20 1 1 A C 12 1_555 B G 11 1_555 -0.098 -0.214 0.060 2.135 -18.977 0.670 8 A_C10:G31_B A 10 ? B 31 ? 19 1 1 A U 13 1_555 B A 10 1_555 -0.090 -0.175 -0.011 -7.648 -10.894 -2.121 9 A_U11:A30_B A 11 ? B 30 ? 20 1 1 A U 14 1_555 B A 9 1_555 -0.438 -0.081 -0.209 2.960 -12.576 3.628 10 A_U12:A29_B A 12 ? B 29 ? 20 1 1 A A 15 1_555 B U 8 1_555 -0.279 -0.249 0.056 2.346 -15.436 1.207 11 A_A13:U28_B A 13 ? B 28 ? 20 1 1 A A 16 1_555 B U 7 1_555 0.716 0.072 0.021 1.435 -12.925 -8.165 12 A_A14:U27_B A 14 ? B 27 ? 20 1 1 A A 17 1_555 B U 6 1_555 0.678 -0.004 0.216 8.810 -4.568 -0.395 13 A_A15:U26_B A 15 ? B 26 ? 20 1 1 A G 18 1_555 B C 5 1_555 0.244 0.225 -0.380 -4.096 -10.178 5.023 14 A_G16:C25_B A 16 ? B 25 ? 19 1 1 A C 19 1_555 B G 4 1_555 0.734 0.452 -0.252 -1.782 -3.078 7.204 15 A_C17:G24_B A 17 ? B 24 ? ? ? 1 B U 31 1_555 B A 18 1_555 -0.295 -0.308 0.193 -2.350 -10.700 2.679 16 B_U51:A38_B B 51 ? B 38 ? 20 1 1 B C 32 1_555 B G 17 1_555 0.428 -0.403 0.074 -8.939 0.273 -2.417 17 B_C52:G37_B B 52 ? B 37 ? 19 1 1 B G 33 1_555 B C 16 1_555 -0.144 -0.209 0.194 10.451 6.595 -0.104 18 B_G53:C36_B B 53 ? B 36 ? 19 1 1 B A 34 1_555 B U 39 1_555 0.277 0.566 0.050 -1.074 11.948 170.100 19 B_A54:U59_B B 54 ? B 59 ? 21 2 1 B A 30 1_555 B U 28 1_555 -0.170 -3.317 0.633 -3.686 2.813 58.786 20 B_A50:U48_B B 50 ? B 48 ? 23 3 1 B G 48 1_555 B U 27 1_555 -3.102 -0.764 0.427 14.410 -7.294 -11.333 21 B_G68:U47_B B 68 ? B 47 ? 28 ? 1 B C 49 1_555 B G 26 1_555 0.404 0.120 -0.210 16.198 -26.463 -6.354 22 B_C69:G46_B B 69 ? B 46 ? 19 1 1 B C 50 1_555 B G 25 1_555 0.835 -0.106 0.120 -2.446 -11.021 5.292 23 B_C70:G45_B B 70 ? B 45 ? 19 1 1 B C 51 1_555 B G 24 1_555 -0.535 -0.103 -0.122 3.724 -10.114 2.667 24 B_C71:G44_B B 71 ? B 44 ? 19 1 1 B U 52 1_555 B A 23 1_555 -0.194 -0.167 0.021 9.498 -4.933 1.281 25 B_U72:A43_B B 72 ? B 43 ? 20 1 1 B G 53 1_555 B C 22 1_555 0.053 0.197 -0.219 -0.286 -11.213 4.257 26 B_G73:C42_B B 73 ? B 42 ? 19 1 1 B C 54 1_555 B G 70 1_555 -0.309 0.161 0.141 12.460 -5.188 7.225 27 B_C74:G90_B B 74 ? B 90 ? 19 1 1 B G 55 1_555 B C 69 1_555 0.525 0.038 -0.243 -11.698 -20.534 6.117 28 B_G75:C89_B B 75 ? B 89 ? 19 1 1 B G 56 1_555 B C 68 1_555 0.267 0.069 0.622 0.242 1.203 -2.464 29 B_G76:C88_B B 76 ? B 88 ? 19 1 1 B U 57 1_555 B A 67 1_555 0.129 0.029 0.069 -7.406 -14.437 -8.161 30 B_U77:A87_B B 77 ? B 87 ? 20 1 1 B C 58 1_555 B G 66 1_555 0.220 0.205 -0.233 3.439 -7.894 0.933 31 B_C78:G86_B B 78 ? B 86 ? 19 1 1 B G 119 1_555 B C 65 1_555 -0.201 -0.020 -0.120 -3.538 -9.571 5.358 32 B_G139:C85_B B 139 ? B 85 ? 19 1 1 B C 120 1_555 B G 64 1_555 -0.197 -0.029 -0.196 6.472 -17.536 -5.317 33 B_C140:G84_B B 140 ? B 84 ? 19 1 1 B A 121 1_555 B U 63 1_555 0.417 0.004 -0.136 -5.396 -11.447 0.748 34 B_A141:U83_B B 141 ? B 83 ? 20 1 1 B G 122 1_555 B C 62 1_555 -0.656 -0.291 -0.462 -4.058 -9.934 -5.656 35 B_G142:C82_B B 142 ? B 82 ? 19 1 1 B G 123 1_555 B C 61 1_555 -0.625 0.248 -0.415 -9.403 -17.035 -5.955 36 B_G143:C81_B B 143 ? B 81 ? ? ? 1 B A 75 1_555 B G 117 1_555 -6.781 -4.454 -0.295 0.671 -6.022 -2.356 37 B_A95:G137_B B 95 ? B 137 ? 11 10 1 B G 76 1_555 B C 116 1_555 -1.534 0.247 -0.157 1.921 -8.731 12.622 38 B_G96:C136_B B 96 ? B 136 ? ? 1 1 B G 77 1_555 B C 115 1_555 -1.680 0.422 -0.314 -6.208 -6.291 16.118 39 B_G97:C135_B B 97 ? B 135 ? ? 1 1 B A 78 1_555 B U 114 1_555 -0.340 -0.247 -0.171 0.760 -8.961 -5.448 40 B_A98:U134_B B 98 ? B 134 ? 20 1 1 B C 79 1_555 B G 113 1_555 -0.038 -0.054 -0.178 6.291 -16.098 1.311 41 B_C99:G133_B B 99 ? B 133 ? 19 1 1 B U 80 1_555 B A 112 1_555 -0.038 -0.025 0.250 -2.149 -12.023 4.183 42 B_U100:A132_B B 100 ? B 132 ? 20 1 1 B G 81 1_555 B C 111 1_555 -0.115 0.063 0.083 -8.193 -15.830 0.909 43 B_G101:C131_B B 101 ? B 131 ? 19 1 1 B G 82 1_555 B A 109 1_555 8.203 -4.492 -0.125 -9.446 -10.646 -58.791 44 B_G102:A129_B B 102 ? B 129 ? ? ? 1 B A 85 1_555 B U 106 1_555 -4.083 -1.778 -0.015 3.200 -1.659 -93.827 45 B_A105:U126_B B 105 ? B 126 ? 24 4 1 B A 86 1_555 B A 105 1_555 -4.088 1.352 -0.056 12.847 -9.344 -107.948 46 B_A106:A125_B B 106 ? B 125 ? 5 4 1 B A 87 1_555 B C 104 1_555 -5.588 -2.147 -0.587 18.271 -30.039 -43.832 47 B_A107:C124_B B 107 ? B 124 ? ? ? 1 B C 88 1_555 B G 103 1_555 0.116 -0.175 0.075 5.921 -20.071 1.480 48 B_C108:G123_B B 108 ? B 123 ? 19 1 1 B C 89 1_555 B G 102 1_555 0.065 -0.002 0.225 -0.755 -8.899 -0.791 49 B_C109:G122_B B 109 ? B 122 ? 19 1 1 B A 90 1_555 B U 101 1_555 0.098 -0.112 0.035 2.957 -10.572 -0.291 50 B_A110:U121_B B 110 ? B 121 ? 20 1 1 B C 91 1_555 B G 100 1_555 0.226 -0.201 -0.210 5.876 -16.893 0.675 51 B_C111:G120_B B 111 ? B 120 ? 19 1 1 B A 92 1_555 B U 99 1_555 0.303 -0.260 -0.079 -6.730 -6.685 -2.547 52 B_A112:U119_B B 112 ? B 119 ? 20 1 1 B G 93 1_555 B C 98 1_555 0.149 -0.110 -0.182 -2.415 -5.216 1.667 53 B_G113:C118_B B 113 ? B 118 ? 19 1 1 B G 94 1_555 B A 97 1_555 7.759 -5.219 0.584 2.838 -18.917 -47.884 54 B_G114:A117_B B 114 ? B 117 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 4 1_555 B G 44 1_555 A G 5 1_555 B C 43 1_555 -0.910 -2.287 3.229 -4.532 2.613 26.677 -5.509 0.823 3.104 5.594 9.704 27.176 1 AA_C2G3:C63G64_BB A 2 ? B 64 ? A 3 ? B 63 ? 1 A G 5 1_555 B C 43 1_555 A C 6 1_555 B G 42 1_555 -0.134 -1.582 3.194 1.372 2.655 34.825 -3.018 0.421 3.062 4.425 -2.287 34.949 2 AA_G3C4:G62C63_BB A 3 ? B 63 ? A 4 ? B 62 ? 1 A C 6 1_555 B G 42 1_555 A C 7 1_555 B G 41 1_555 0.181 -1.889 3.453 0.084 10.782 31.500 -5.039 -0.303 2.680 19.171 -0.149 33.250 3 AA_C4C5:G61G62_BB A 4 ? B 62 ? A 5 ? B 61 ? 1 A C 7 1_555 B G 41 1_555 A G 9 1_555 B C 40 1_555 -2.835 -1.528 3.249 2.174 6.281 50.504 -2.194 3.442 2.936 7.325 -2.535 50.911 4 AA_C5G7:C60G61_BB A 5 ? B 61 ? A 7 ? B 60 ? 1 A G 9 1_555 B C 40 1_555 A G 10 1_555 B U 13 1_555 3.440 -1.330 2.890 -14.502 -2.863 65.299 -1.119 -3.579 2.220 -2.619 13.263 66.770 5 AA_G7G8:U33C60_BB A 7 ? B 60 ? A 8 ? B 33 ? 1 A G 10 1_555 B U 13 1_555 A A 11 1_555 B U 12 1_555 0.386 -1.612 3.432 -5.595 8.091 42.856 -2.922 -1.047 3.023 10.902 7.539 43.919 6 AA_G8A9:U32U33_BB A 8 ? B 33 ? A 9 ? B 32 ? 1 A A 11 1_555 B U 12 1_555 A C 12 1_555 B G 11 1_555 0.576 -1.930 3.442 0.921 5.565 35.617 -3.917 -0.799 3.128 9.028 -1.494 36.046 7 AA_A9C10:G31U32_BB A 9 ? B 32 ? A 10 ? B 31 ? 1 A C 12 1_555 B G 11 1_555 A U 13 1_555 B A 10 1_555 -1.127 -2.110 3.481 -2.805 9.896 28.539 -5.986 1.604 2.710 19.300 5.470 30.300 8 AA_C10U11:A30G31_BB A 10 ? B 31 ? A 11 ? B 30 ? 1 A U 13 1_555 B A 10 1_555 A U 14 1_555 B A 9 1_555 -0.040 -1.096 3.061 -0.484 3.104 30.476 -2.638 -0.012 2.938 5.886 0.917 30.634 9 AA_U11U12:A29A30_BB A 11 ? B 30 ? A 12 ? B 29 ? 1 A U 14 1_555 B A 9 1_555 A A 15 1_555 B U 8 1_555 -0.072 -1.006 3.226 -3.345 12.880 30.316 -3.797 -0.399 2.591 23.270 6.044 33.045 10 AA_U12A13:U28A29_BB A 12 ? B 29 ? A 13 ? B 28 ? 1 A A 15 1_555 B U 8 1_555 A A 16 1_555 B U 7 1_555 -0.422 -1.146 3.311 1.678 6.909 39.586 -2.437 0.801 3.057 10.102 -2.454 40.194 11 AA_A13A14:U27U28_BB A 13 ? B 28 ? A 14 ? B 27 ? 1 A A 16 1_555 B U 7 1_555 A A 17 1_555 B U 6 1_555 0.805 -1.487 3.084 1.722 5.748 27.909 -4.203 -1.279 2.771 11.745 -3.518 28.534 12 AA_A14A15:U26U27_BB A 14 ? B 27 ? A 15 ? B 26 ? 1 A A 17 1_555 B U 6 1_555 A G 18 1_555 B C 5 1_555 0.473 -1.730 3.508 6.865 10.608 28.257 -5.304 0.443 2.736 20.482 -13.255 30.901 13 AA_A15G16:C25U26_BB A 15 ? B 26 ? A 16 ? B 25 ? 1 A G 18 1_555 B C 5 1_555 A C 19 1_555 B G 4 1_555 0.483 -1.924 3.191 1.961 1.049 33.574 -3.491 -0.524 3.153 1.813 -3.390 33.645 14 AA_G16C17:G24C25_BB A 16 ? B 25 ? A 17 ? B 24 ? 1 B U 31 1_555 B A 18 1_555 B C 32 1_555 B G 17 1_555 0.147 -1.712 3.489 1.688 -0.285 37.216 -2.639 0.009 3.504 -0.447 -2.644 37.254 15 BB_U51C52:G37A38_BB B 51 ? B 38 ? B 52 ? B 37 ? 1 B C 32 1_555 B G 17 1_555 B G 33 1_555 B C 16 1_555 0.171 -0.983 3.029 -1.743 -1.497 20.477 -2.133 -1.193 3.067 -4.193 4.883 20.604 16 BB_C52G53:C36G37_BB B 52 ? B 37 ? B 53 ? B 36 ? 1 B G 33 1_555 B C 16 1_555 B A 34 1_555 B U 39 1_555 1.554 -2.607 3.328 -3.430 0.311 -54.431 2.826 1.481 3.426 -0.340 -3.746 -54.532 17 BB_G53A54:U59C36_BB B 53 ? B 36 ? B 54 ? B 59 ? 1 B A 30 1_555 B U 28 1_555 B G 48 1_555 B U 27 1_555 1.279 -2.935 -2.870 159.338 -42.028 39.444 -1.658 -1.321 0.891 -22.296 -84.529 165.685 18 BB_A50G68:U47U48_BB B 50 ? B 48 ? B 68 ? B 47 ? 1 B G 48 1_555 B U 27 1_555 B C 49 1_555 B G 26 1_555 0.045 -1.315 3.237 2.218 5.212 49.508 -1.931 0.104 3.092 6.200 -2.639 49.811 19 BB_G68C69:G46U47_BB B 68 ? B 47 ? B 69 ? B 46 ? 1 B C 49 1_555 B G 26 1_555 B C 50 1_555 B G 25 1_555 0.276 -1.603 3.765 -2.179 9.573 35.730 -3.925 -0.754 3.222 15.250 3.471 37.011 20 BB_C69C70:G45G46_BB B 69 ? B 46 ? B 70 ? B 45 ? 1 B C 50 1_555 B G 25 1_555 B C 51 1_555 B G 24 1_555 -0.350 -1.443 2.870 2.276 10.791 25.546 -5.048 1.159 2.063 23.081 -4.869 27.788 21 BB_C70C71:G44G45_BB B 70 ? B 45 ? B 71 ? B 44 ? 1 B C 51 1_555 B G 24 1_555 B U 52 1_555 B A 23 1_555 0.150 -1.446 3.084 -2.928 9.362 34.019 -3.602 -0.630 2.586 15.603 4.880 35.365 22 BB_C71U72:A43G44_BB B 71 ? B 44 ? B 72 ? B 43 ? 1 B U 52 1_555 B A 23 1_555 B G 53 1_555 B C 22 1_555 0.704 -1.332 3.221 4.929 14.338 35.615 -3.654 -0.502 2.588 22.241 -7.645 38.611 23 BB_U72G73:C42A43_BB B 72 ? B 43 ? B 73 ? B 42 ? 1 B G 53 1_555 B C 22 1_555 B C 54 1_555 B G 70 1_555 1.048 -1.185 2.982 -4.204 1.678 33.920 -2.248 -2.368 2.776 2.860 7.166 34.212 24 BB_G73C74:G90C42_BB B 73 ? B 42 ? B 74 ? B 90 ? 1 B C 54 1_555 B G 70 1_555 B G 55 1_555 B C 69 1_555 0.310 -1.513 3.415 6.921 23.384 39.529 -3.814 0.163 2.254 31.239 -9.246 46.189 25 BB_C74G75:C89G90_BB B 74 ? B 90 ? B 75 ? B 89 ? 1 B G 55 1_555 B C 69 1_555 B G 56 1_555 B C 68 1_555 -1.193 -1.937 2.606 -10.989 7.556 27.027 -4.958 0.517 2.297 15.059 21.902 30.083 26 BB_G75G76:C88C89_BB B 75 ? B 89 ? B 76 ? B 88 ? 1 B G 56 1_555 B C 68 1_555 B U 57 1_555 B A 67 1_555 -0.708 -1.741 3.484 1.899 7.526 33.448 -4.135 1.498 2.990 12.861 -3.245 34.312 27 BB_G76U77:A87C88_BB B 76 ? B 88 ? B 77 ? B 87 ? 1 B U 57 1_555 B A 67 1_555 B C 58 1_555 B G 66 1_555 -0.097 -0.953 3.036 3.269 8.785 32.256 -2.934 0.647 2.669 15.410 -5.735 33.555 28 BB_U77C78:G86A87_BB B 77 ? B 87 ? B 78 ? B 86 ? 1 B C 58 1_555 B G 66 1_555 B G 119 1_555 B C 65 1_555 -1.029 -0.910 3.320 -5.937 8.262 41.268 -2.106 0.811 3.199 11.513 8.272 42.450 29 BB_C78G139:C85G86_BB B 78 ? B 86 ? B 139 ? B 85 ? 1 B G 119 1_555 B C 65 1_555 B C 120 1_555 B G 64 1_555 -0.662 -1.405 3.076 0.076 0.199 29.767 -2.775 1.304 3.065 0.387 -0.149 29.768 30 BB_G139C140:G84C85_BB B 139 ? B 85 ? B 140 ? B 84 ? 1 B C 120 1_555 B G 64 1_555 B A 121 1_555 B U 63 1_555 0.266 -1.648 3.468 -0.463 14.318 35.097 -4.325 -0.468 2.619 22.614 0.731 37.823 31 BB_C140A141:U83G84_BB B 140 ? B 84 ? B 141 ? B 83 ? 1 B A 121 1_555 B U 63 1_555 B G 122 1_555 B C 62 1_555 -0.135 -1.825 3.335 2.448 13.242 27.289 -5.865 0.698 2.212 26.144 -4.832 30.374 32 BB_A141G142:C82U83_BB B 141 ? B 83 ? B 142 ? B 82 ? 1 B G 122 1_555 B C 62 1_555 B G 123 1_555 B C 61 1_555 1.191 -1.228 3.526 1.564 11.368 30.471 -4.229 -1.847 2.947 20.728 -2.852 32.512 33 BB_G142G143:C81C82_BB B 142 ? B 82 ? B 143 ? B 81 ? 1 B A 75 1_555 B G 117 1_555 B G 76 1_555 B C 116 1_555 0.763 -0.392 3.425 -7.513 5.807 58.219 -0.706 -1.173 3.263 5.924 7.665 58.921 34 BB_A95G96:C136G137_BB B 95 ? B 137 ? B 96 ? B 136 ? 1 B G 76 1_555 B C 116 1_555 B G 77 1_555 B C 115 1_555 0.110 -1.793 3.287 -3.335 10.456 31.071 -4.804 -0.717 2.541 18.800 5.996 32.907 35 BB_G96G97:C135C136_BB B 96 ? B 136 ? B 97 ? B 135 ? 1 B G 77 1_555 B C 115 1_555 B A 78 1_555 B U 114 1_555 -1.617 -1.194 3.214 -3.259 1.724 35.134 -2.221 2.185 3.286 2.847 5.380 35.321 36 BB_G97A98:U134C135_BB B 97 ? B 135 ? B 98 ? B 134 ? 1 B A 78 1_555 B U 114 1_555 B C 79 1_555 B G 113 1_555 0.624 -1.263 3.160 2.649 3.598 35.332 -2.565 -0.653 3.057 5.899 -4.344 35.604 37 BB_A98C99:G133U134_BB B 98 ? B 134 ? B 99 ? B 133 ? 1 B C 79 1_555 B G 113 1_555 B U 80 1_555 B A 112 1_555 0.002 -1.805 3.413 -2.445 11.536 29.397 -5.328 -0.430 2.534 21.664 4.591 31.626 38 BB_C99U100:A132G133_BB B 99 ? B 133 ? B 100 ? B 132 ? 1 B U 80 1_555 B A 112 1_555 B G 81 1_555 B C 111 1_555 0.383 -1.779 3.266 3.651 9.098 32.836 -4.363 -0.113 2.717 15.665 -6.287 34.230 39 BB_U100G101:C131A132_BB B 100 ? B 132 ? B 101 ? B 131 ? 1 B G 81 1_555 B C 111 1_555 B G 82 1_555 B A 109 1_555 -1.471 -1.372 3.509 2.256 -0.090 88.057 -0.985 1.109 3.479 -0.065 -1.622 88.080 40 BB_G101G102:A129C131_BB B 101 ? B 131 ? B 102 ? B 129 ? 1 B A 85 1_555 B U 106 1_555 B A 86 1_555 B A 105 1_555 -0.517 -1.707 3.087 1.797 -5.805 34.954 -1.967 1.107 3.289 -9.575 -2.964 35.462 41 BB_A105A106:A125U126_BB B 105 ? B 126 ? B 106 ? B 125 ? 1 B A 86 1_555 B A 105 1_555 B A 87 1_555 B C 104 1_555 4.242 -2.024 3.126 -7.414 18.741 36.860 -4.212 -6.485 1.167 27.283 10.794 41.842 42 BB_A106A107:C124A125_BB B 106 ? B 125 ? B 107 ? B 124 ? 1 B A 87 1_555 B C 104 1_555 B C 88 1_555 B G 103 1_555 2.050 -1.722 3.719 -3.970 15.432 65.422 -2.202 -2.020 3.175 14.062 3.618 67.124 43 BB_A107C108:G123C124_BB B 107 ? B 124 ? B 108 ? B 123 ? 1 B C 88 1_555 B G 103 1_555 B C 89 1_555 B G 102 1_555 -0.435 -1.580 3.421 -3.624 5.586 32.470 -3.724 0.144 3.142 9.860 6.397 33.128 44 BB_C108C109:G122G123_BB B 108 ? B 123 ? B 109 ? B 122 ? 1 B C 89 1_555 B G 102 1_555 B A 90 1_555 B U 101 1_555 0.145 -1.584 2.999 1.952 7.749 33.239 -3.757 0.020 2.579 13.309 -3.352 34.160 45 BB_C109A110:U121G122_BB B 109 ? B 122 ? B 110 ? B 121 ? 1 B A 90 1_555 B U 101 1_555 B C 91 1_555 B G 100 1_555 -0.234 -1.168 3.229 1.364 5.713 33.643 -2.856 0.605 2.985 9.778 -2.335 34.138 46 BB_A110C111:G120U121_BB B 110 ? B 121 ? B 111 ? B 120 ? 1 B C 91 1_555 B G 100 1_555 B A 92 1_555 B U 99 1_555 0.298 -1.532 3.546 -2.106 12.044 33.728 -4.232 -0.790 2.828 19.962 3.491 35.815 47 BB_C111A112:U119G120_BB B 111 ? B 120 ? B 112 ? B 119 ? 1 B A 92 1_555 B U 99 1_555 B G 93 1_555 B C 98 1_555 0.566 -2.203 3.111 3.199 8.990 28.739 -5.790 -0.526 2.376 17.513 -6.231 30.250 48 BB_A112G113:C118U119_BB B 112 ? B 119 ? B 113 ? B 118 ? 1 B G 93 1_555 B C 98 1_555 B G 94 1_555 B A 97 1_555 -4.264 -1.576 3.466 1.103 17.366 53.156 -2.672 4.624 2.784 18.845 -1.196 55.734 49 BB_G113G114:A117C118_BB B 113 ? B 118 ? B 114 ? B 117 ? # _atom_sites.entry_id 3B4A _atom_sites.fract_transf_matrix[1][1] 0.005645 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023985 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012870 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_