data_3B73 # _entry.id 3B73 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3B73 RCSB RCSB045160 WWPDB D_1000045160 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC88207 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3B73 _pdbx_database_status.recvd_initial_deposition_date 2007-10-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, Y.' 1 'Zhou, M.' 2 'Keigher, L.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal Structure of the PhiH1 repressor-like Protein from Haloarcula marismortui.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kim, Y.' 1 primary 'Zhou, M.' 2 primary 'Keigher, L.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 3B73 _cell.length_a 48.392 _cell.length_b 53.483 _cell.length_c 89.343 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3B73 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PhiH1 repressor-like protein' 12486.229 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 55 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)RQSGSW(MSE)TIWDDRILEIIHEEGNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLANGVYVITEE GEAYLNGEYDAGKERYINRGNSTDEENGADAPDGPGINS ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMRQSGSWMTIWDDRILEIIHEEGNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLANGVYVITEEGEAYLNGE YDAGKERYINRGNSTDEENGADAPDGPGINS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC88207 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 ARG n 1 6 GLN n 1 7 SER n 1 8 GLY n 1 9 SER n 1 10 TRP n 1 11 MSE n 1 12 THR n 1 13 ILE n 1 14 TRP n 1 15 ASP n 1 16 ASP n 1 17 ARG n 1 18 ILE n 1 19 LEU n 1 20 GLU n 1 21 ILE n 1 22 ILE n 1 23 HIS n 1 24 GLU n 1 25 GLU n 1 26 GLY n 1 27 ASN n 1 28 GLY n 1 29 SER n 1 30 PRO n 1 31 LYS n 1 32 GLU n 1 33 LEU n 1 34 GLU n 1 35 ASP n 1 36 ARG n 1 37 ASP n 1 38 GLU n 1 39 ILE n 1 40 ARG n 1 41 ILE n 1 42 SER n 1 43 LYS n 1 44 SER n 1 45 SER n 1 46 VAL n 1 47 SER n 1 48 ARG n 1 49 ARG n 1 50 LEU n 1 51 LYS n 1 52 LYS n 1 53 LEU n 1 54 ALA n 1 55 ASP n 1 56 HIS n 1 57 ASP n 1 58 LEU n 1 59 LEU n 1 60 GLN n 1 61 PRO n 1 62 LEU n 1 63 ALA n 1 64 ASN n 1 65 GLY n 1 66 VAL n 1 67 TYR n 1 68 VAL n 1 69 ILE n 1 70 THR n 1 71 GLU n 1 72 GLU n 1 73 GLY n 1 74 GLU n 1 75 ALA n 1 76 TYR n 1 77 LEU n 1 78 ASN n 1 79 GLY n 1 80 GLU n 1 81 TYR n 1 82 ASP n 1 83 ALA n 1 84 GLY n 1 85 LYS n 1 86 GLU n 1 87 ARG n 1 88 TYR n 1 89 ILE n 1 90 ASN n 1 91 ARG n 1 92 GLY n 1 93 ASN n 1 94 SER n 1 95 THR n 1 96 ASP n 1 97 GLU n 1 98 GLU n 1 99 ASN n 1 100 GLY n 1 101 ALA n 1 102 ASP n 1 103 ALA n 1 104 PRO n 1 105 ASP n 1 106 GLY n 1 107 PRO n 1 108 GLY n 1 109 ILE n 1 110 ASN n 1 111 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Haloarcula _entity_src_gen.pdbx_gene_src_gene 'phrH2, rrnAC2285' _entity_src_gen.gene_src_species 'Haloarcula marismortui' _entity_src_gen.gene_src_strain 'DSM 3752, JCM 8966' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haloarcula marismortui ATCC 43049' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272569 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5V043_HALMA _struct_ref.pdbx_db_accession Q5V043 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRQSGSWMTIWDDRILEIIHEEGNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLANGVYVITEEGEAYLNGEYDA GKERYINRGNSTDEENGADAPDGPGINS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3B73 A 4 ? 111 ? Q5V043 1 ? 108 ? 1 108 2 1 3B73 B 4 ? 111 ? Q5V043 1 ? 108 ? 1 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3B73 SER A 1 ? UNP Q5V043 ? ? 'EXPRESSION TAG' -2 1 1 3B73 ASN A 2 ? UNP Q5V043 ? ? 'EXPRESSION TAG' -1 2 1 3B73 ALA A 3 ? UNP Q5V043 ? ? 'EXPRESSION TAG' 0 3 2 3B73 SER B 1 ? UNP Q5V043 ? ? 'EXPRESSION TAG' -2 4 2 3B73 ASN B 2 ? UNP Q5V043 ? ? 'EXPRESSION TAG' -1 5 2 3B73 ALA B 3 ? UNP Q5V043 ? ? 'EXPRESSION TAG' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3B73 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.4 _exptl_crystal_grow.pdbx_details '1.26M Ammonium sulfate, 0.1M Acetate pH 4.5, 0.2M Sodium chloride, pH 4.4, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-10-12 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal, Si111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.entry_id 3B73 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 34.29 _reflns.d_resolution_high 2.12 _reflns.number_obs 12752 _reflns.number_all 12752 _reflns.percent_possible_obs 90.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.09 _reflns.pdbx_netI_over_sigmaI 11.5 _reflns.B_iso_Wilson_estimate 48.823 _reflns.pdbx_redundancy 13.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.12 _reflns_shell.d_res_low 2.2 _reflns_shell.percent_possible_all 64.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.319 _reflns_shell.meanI_over_sigI_obs 5.4 _reflns_shell.pdbx_redundancy 10.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 888 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3B73 _refine.ls_number_reflns_obs 11931 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.29 _refine.ls_d_res_high 2.12 _refine.ls_percent_reflns_obs 91.63 _refine.ls_R_factor_obs 0.196 _refine.ls_R_factor_all 0.196 _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.228 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 615 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.959 _refine.B_iso_mean 61.515 _refine.aniso_B[1][1] 2.59 _refine.aniso_B[2][2] -1.16 _refine.aniso_B[3][3] -1.43 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.225 _refine.pdbx_overall_ESU_R_Free 0.183 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1492 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 1557 _refine_hist.d_res_high 2.12 _refine_hist.d_res_low 34.29 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d .010 .021 ? 1527 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.178 1.968 ? 2062 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.607 5.000 ? 187 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.124 24.588 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.398 15.000 ? 287 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.762 15.000 ? 15 'X-RAY DIFFRACTION' ? r_chiral_restr .075 .200 ? 212 'X-RAY DIFFRACTION' ? r_gen_planes_refined .005 .020 ? 1183 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined .230 .200 ? 734 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined .321 .200 ? 1049 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined .157 .200 ? 84 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined .298 .200 ? 24 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined .264 .200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 10.291 1.500 ? 913 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 11.747 2.000 ? 1467 'X-RAY DIFFRACTION' ? r_scbond_it 18.177 3.000 ? 614 'X-RAY DIFFRACTION' ? r_scangle_it 18.378 4.500 ? 595 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.120 _refine_ls_shell.d_res_low 2.175 _refine_ls_shell.number_reflns_R_work 604 _refine_ls_shell.R_factor_R_work 0.284 _refine_ls_shell.percent_reflns_obs 66.12 _refine_ls_shell.R_factor_R_free 0.366 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 650 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3B73 _struct.title 'Crystal structure of the PhiH1 repressor-like protein from Haloarcula marismortui' _struct.pdbx_descriptor 'PhiH1 repressor-like protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3B73 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;winged-helix-turn-helix, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 12 ? GLY A 26 ? THR A 9 GLY A 23 1 ? 15 HELX_P HELX_P2 2 SER A 29 ? ASP A 35 ? SER A 26 ASP A 32 1 ? 7 HELX_P HELX_P3 3 SER A 42 ? HIS A 56 ? SER A 39 HIS A 53 1 ? 15 HELX_P HELX_P4 4 THR A 70 ? ASN A 78 ? THR A 67 ASN A 75 1 ? 9 HELX_P HELX_P5 5 THR B 12 ? GLY B 26 ? THR B 9 GLY B 23 1 ? 15 HELX_P HELX_P6 6 SER B 29 ? ASP B 35 ? SER B 26 ASP B 32 1 ? 7 HELX_P HELX_P7 7 SER B 42 ? HIS B 56 ? SER B 39 HIS B 53 1 ? 15 HELX_P HELX_P8 8 ALA B 63 ? GLY B 65 ? ALA B 60 GLY B 62 5 ? 3 HELX_P HELX_P9 9 THR B 70 ? ASN B 78 ? THR B 67 ASN B 75 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.318 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A ARG 5 N ? ? A MSE 1 A ARG 2 1_555 ? ? ? ? ? ? ? 1.335 ? covale3 covale ? ? A TRP 10 C ? ? ? 1_555 A MSE 11 N ? ? A TRP 7 A MSE 8 1_555 ? ? ? ? ? ? ? 1.317 ? covale4 covale ? ? A MSE 11 C ? ? ? 1_555 A THR 12 N ? ? A MSE 8 A THR 9 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale ? ? B ALA 3 C ? ? ? 1_555 B MSE 4 N ? ? B ALA 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.326 ? covale6 covale ? ? B MSE 4 C ? ? ? 1_555 B ARG 5 N ? ? B MSE 1 B ARG 2 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? B TRP 10 C ? ? ? 1_555 B MSE 11 N ? ? B TRP 7 B MSE 8 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? B MSE 11 C ? ? ? 1_555 B THR 12 N ? ? B MSE 8 B THR 9 1_555 ? ? ? ? ? ? ? 1.331 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 59 ? PRO A 61 ? LEU A 56 PRO A 58 A 2 TYR A 67 ? ILE A 69 ? TYR A 64 ILE A 66 B 1 TYR A 81 ? ASP A 82 ? TYR A 78 ASP A 79 B 2 ARG A 87 ? TYR A 88 ? ARG A 84 TYR A 85 C 1 ASN B 27 ? GLY B 28 ? ASN B 24 GLY B 25 C 2 VAL B 66 ? ILE B 69 ? VAL B 63 ILE B 66 C 3 LEU B 59 ? LEU B 62 ? LEU B 56 LEU B 59 D 1 TYR B 81 ? ASP B 82 ? TYR B 78 ASP B 79 D 2 ARG B 87 ? TYR B 88 ? ARG B 84 TYR B 85 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 60 ? N GLN A 57 O VAL A 68 ? O VAL A 65 B 1 2 N ASP A 82 ? N ASP A 79 O ARG A 87 ? O ARG A 84 C 1 2 N GLY B 28 ? N GLY B 25 O TYR B 67 ? O TYR B 64 C 2 3 O VAL B 66 ? O VAL B 63 N LEU B 62 ? N LEU B 59 D 1 2 N ASP B 82 ? N ASP B 79 O ARG B 87 ? O ARG B 84 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 B 109' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 109' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 40 ? ARG A 37 . ? 3_555 ? 2 AC1 5 ILE B 41 ? ILE B 38 . ? 1_555 ? 3 AC1 5 SER B 42 ? SER B 39 . ? 1_555 ? 4 AC1 5 SER B 45 ? SER B 42 . ? 1_555 ? 5 AC1 5 LYS B 85 ? LYS B 82 . ? 3_555 ? 6 AC2 6 ARG A 40 ? ARG A 37 . ? 1_555 ? 7 AC2 6 ILE A 41 ? ILE A 38 . ? 1_555 ? 8 AC2 6 SER A 42 ? SER A 39 . ? 1_555 ? 9 AC2 6 SER A 45 ? SER A 42 . ? 1_555 ? 10 AC2 6 LYS A 85 ? LYS A 82 . ? 3_545 ? 11 AC2 6 ARG B 40 ? ARG B 37 . ? 3_545 ? # _database_PDB_matrix.entry_id 3B73 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3B73 _atom_sites.fract_transf_matrix[1][1] .020665 _atom_sites.fract_transf_matrix[1][2] .000000 _atom_sites.fract_transf_matrix[1][3] .000000 _atom_sites.fract_transf_matrix[2][1] .000000 _atom_sites.fract_transf_matrix[2][2] .018698 _atom_sites.fract_transf_matrix[2][3] .000000 _atom_sites.fract_transf_matrix[3][1] .000000 _atom_sites.fract_transf_matrix[3][2] .000000 _atom_sites.fract_transf_matrix[3][3] .011193 _atom_sites.fract_transf_vector[1] .00000 _atom_sites.fract_transf_vector[2] .00000 _atom_sites.fract_transf_vector[3] .00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 ARG 5 2 2 ARG ARG A . n A 1 6 GLN 6 3 3 GLN GLN A . n A 1 7 SER 7 4 4 SER SER A . n A 1 8 GLY 8 5 5 GLY GLY A . n A 1 9 SER 9 6 6 SER SER A . n A 1 10 TRP 10 7 7 TRP TRP A . n A 1 11 MSE 11 8 8 MSE MSE A . n A 1 12 THR 12 9 9 THR THR A . n A 1 13 ILE 13 10 10 ILE ILE A . n A 1 14 TRP 14 11 11 TRP TRP A . n A 1 15 ASP 15 12 12 ASP ASP A . n A 1 16 ASP 16 13 13 ASP ASP A . n A 1 17 ARG 17 14 14 ARG ARG A . n A 1 18 ILE 18 15 15 ILE ILE A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 GLU 20 17 17 GLU GLU A . n A 1 21 ILE 21 18 18 ILE ILE A . n A 1 22 ILE 22 19 19 ILE ILE A . n A 1 23 HIS 23 20 20 HIS HIS A . n A 1 24 GLU 24 21 21 GLU GLU A . n A 1 25 GLU 25 22 22 GLU GLU A . n A 1 26 GLY 26 23 23 GLY GLY A . n A 1 27 ASN 27 24 24 ASN ASN A . n A 1 28 GLY 28 25 25 GLY GLY A . n A 1 29 SER 29 26 26 SER SER A . n A 1 30 PRO 30 27 27 PRO PRO A . n A 1 31 LYS 31 28 28 LYS LYS A . n A 1 32 GLU 32 29 29 GLU GLU A . n A 1 33 LEU 33 30 30 LEU LEU A . n A 1 34 GLU 34 31 31 GLU GLU A . n A 1 35 ASP 35 32 32 ASP ASP A . n A 1 36 ARG 36 33 33 ARG ARG A . n A 1 37 ASP 37 34 34 ASP ASP A . n A 1 38 GLU 38 35 35 GLU GLU A . n A 1 39 ILE 39 36 36 ILE ILE A . n A 1 40 ARG 40 37 37 ARG ARG A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 LYS 43 40 40 LYS LYS A . n A 1 44 SER 44 41 41 SER SER A . n A 1 45 SER 45 42 42 SER SER A . n A 1 46 VAL 46 43 43 VAL VAL A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 ARG 48 45 45 ARG ARG A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 LEU 50 47 47 LEU LEU A . n A 1 51 LYS 51 48 48 LYS LYS A . n A 1 52 LYS 52 49 49 LYS LYS A . n A 1 53 LEU 53 50 50 LEU LEU A . n A 1 54 ALA 54 51 51 ALA ALA A . n A 1 55 ASP 55 52 52 ASP ASP A . n A 1 56 HIS 56 53 53 HIS HIS A . n A 1 57 ASP 57 54 54 ASP ASP A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 LEU 59 56 56 LEU LEU A . n A 1 60 GLN 60 57 57 GLN GLN A . n A 1 61 PRO 61 58 58 PRO PRO A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 ASN 64 61 61 ASN ASN A . n A 1 65 GLY 65 62 62 GLY GLY A . n A 1 66 VAL 66 63 63 VAL VAL A . n A 1 67 TYR 67 64 64 TYR TYR A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 ILE 69 66 66 ILE ILE A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 GLU 74 71 71 GLU GLU A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 TYR 76 73 73 TYR TYR A . n A 1 77 LEU 77 74 74 LEU LEU A . n A 1 78 ASN 78 75 75 ASN ASN A . n A 1 79 GLY 79 76 76 GLY GLY A . n A 1 80 GLU 80 77 77 GLU GLU A . n A 1 81 TYR 81 78 78 TYR TYR A . n A 1 82 ASP 82 79 79 ASP ASP A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 GLY 84 81 81 GLY GLY A . n A 1 85 LYS 85 82 82 LYS LYS A . n A 1 86 GLU 86 83 83 GLU GLU A . n A 1 87 ARG 87 84 84 ARG ARG A . n A 1 88 TYR 88 85 85 TYR TYR A . n A 1 89 ILE 89 86 86 ILE ILE A . n A 1 90 ASN 90 87 ? ? ? A . n A 1 91 ARG 91 88 ? ? ? A . n A 1 92 GLY 92 89 ? ? ? A . n A 1 93 ASN 93 90 ? ? ? A . n A 1 94 SER 94 91 ? ? ? A . n A 1 95 THR 95 92 ? ? ? A . n A 1 96 ASP 96 93 ? ? ? A . n A 1 97 GLU 97 94 ? ? ? A . n A 1 98 GLU 98 95 ? ? ? A . n A 1 99 ASN 99 96 ? ? ? A . n A 1 100 GLY 100 97 ? ? ? A . n A 1 101 ALA 101 98 ? ? ? A . n A 1 102 ASP 102 99 ? ? ? A . n A 1 103 ALA 103 100 ? ? ? A . n A 1 104 PRO 104 101 ? ? ? A . n A 1 105 ASP 105 102 ? ? ? A . n A 1 106 GLY 106 103 ? ? ? A . n A 1 107 PRO 107 104 ? ? ? A . n A 1 108 GLY 108 105 ? ? ? A . n A 1 109 ILE 109 106 ? ? ? A . n A 1 110 ASN 110 107 ? ? ? A . n A 1 111 SER 111 108 ? ? ? A . n B 1 1 SER 1 -2 ? ? ? B . n B 1 2 ASN 2 -1 -1 ASN ASN B . n B 1 3 ALA 3 0 0 ALA ALA B . n B 1 4 MSE 4 1 1 MSE MSE B . n B 1 5 ARG 5 2 2 ARG ARG B . n B 1 6 GLN 6 3 3 GLN GLN B . n B 1 7 SER 7 4 4 SER SER B . n B 1 8 GLY 8 5 5 GLY GLY B . n B 1 9 SER 9 6 6 SER SER B . n B 1 10 TRP 10 7 7 TRP TRP B . n B 1 11 MSE 11 8 8 MSE MSE B . n B 1 12 THR 12 9 9 THR THR B . n B 1 13 ILE 13 10 10 ILE ILE B . n B 1 14 TRP 14 11 11 TRP TRP B . n B 1 15 ASP 15 12 12 ASP ASP B . n B 1 16 ASP 16 13 13 ASP ASP B . n B 1 17 ARG 17 14 14 ARG ARG B . n B 1 18 ILE 18 15 15 ILE ILE B . n B 1 19 LEU 19 16 16 LEU LEU B . n B 1 20 GLU 20 17 17 GLU GLU B . n B 1 21 ILE 21 18 18 ILE ILE B . n B 1 22 ILE 22 19 19 ILE ILE B . n B 1 23 HIS 23 20 20 HIS HIS B . n B 1 24 GLU 24 21 21 GLU GLU B . n B 1 25 GLU 25 22 22 GLU GLU B . n B 1 26 GLY 26 23 23 GLY GLY B . n B 1 27 ASN 27 24 24 ASN ASN B . n B 1 28 GLY 28 25 25 GLY GLY B . n B 1 29 SER 29 26 26 SER SER B . n B 1 30 PRO 30 27 27 PRO PRO B . n B 1 31 LYS 31 28 28 LYS LYS B . n B 1 32 GLU 32 29 29 GLU GLU B . n B 1 33 LEU 33 30 30 LEU LEU B . n B 1 34 GLU 34 31 31 GLU GLU B . n B 1 35 ASP 35 32 32 ASP ASP B . n B 1 36 ARG 36 33 33 ARG ARG B . n B 1 37 ASP 37 34 34 ASP ASP B . n B 1 38 GLU 38 35 35 GLU GLU B . n B 1 39 ILE 39 36 36 ILE ILE B . n B 1 40 ARG 40 37 37 ARG ARG B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 SER 42 39 39 SER SER B . n B 1 43 LYS 43 40 40 LYS LYS B . n B 1 44 SER 44 41 41 SER SER B . n B 1 45 SER 45 42 42 SER SER B . n B 1 46 VAL 46 43 43 VAL VAL B . n B 1 47 SER 47 44 44 SER SER B . n B 1 48 ARG 48 45 45 ARG ARG B . n B 1 49 ARG 49 46 46 ARG ARG B . n B 1 50 LEU 50 47 47 LEU LEU B . n B 1 51 LYS 51 48 48 LYS LYS B . n B 1 52 LYS 52 49 49 LYS LYS B . n B 1 53 LEU 53 50 50 LEU LEU B . n B 1 54 ALA 54 51 51 ALA ALA B . n B 1 55 ASP 55 52 52 ASP ASP B . n B 1 56 HIS 56 53 53 HIS HIS B . n B 1 57 ASP 57 54 54 ASP ASP B . n B 1 58 LEU 58 55 55 LEU LEU B . n B 1 59 LEU 59 56 56 LEU LEU B . n B 1 60 GLN 60 57 57 GLN GLN B . n B 1 61 PRO 61 58 58 PRO PRO B . n B 1 62 LEU 62 59 59 LEU LEU B . n B 1 63 ALA 63 60 60 ALA ALA B . n B 1 64 ASN 64 61 61 ASN ASN B . n B 1 65 GLY 65 62 62 GLY GLY B . n B 1 66 VAL 66 63 63 VAL VAL B . n B 1 67 TYR 67 64 64 TYR TYR B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 ILE 69 66 66 ILE ILE B . n B 1 70 THR 70 67 67 THR THR B . n B 1 71 GLU 71 68 68 GLU GLU B . n B 1 72 GLU 72 69 69 GLU GLU B . n B 1 73 GLY 73 70 70 GLY GLY B . n B 1 74 GLU 74 71 71 GLU GLU B . n B 1 75 ALA 75 72 72 ALA ALA B . n B 1 76 TYR 76 73 73 TYR TYR B . n B 1 77 LEU 77 74 74 LEU LEU B . n B 1 78 ASN 78 75 75 ASN ASN B . n B 1 79 GLY 79 76 76 GLY GLY B . n B 1 80 GLU 80 77 77 GLU GLU B . n B 1 81 TYR 81 78 78 TYR TYR B . n B 1 82 ASP 82 79 79 ASP ASP B . n B 1 83 ALA 83 80 80 ALA ALA B . n B 1 84 GLY 84 81 81 GLY GLY B . n B 1 85 LYS 85 82 82 LYS LYS B . n B 1 86 GLU 86 83 83 GLU GLU B . n B 1 87 ARG 87 84 84 ARG ARG B . n B 1 88 TYR 88 85 85 TYR TYR B . n B 1 89 ILE 89 86 86 ILE ILE B . n B 1 90 ASN 90 87 87 ASN ASN B . n B 1 91 ARG 91 88 ? ? ? B . n B 1 92 GLY 92 89 ? ? ? B . n B 1 93 ASN 93 90 ? ? ? B . n B 1 94 SER 94 91 ? ? ? B . n B 1 95 THR 95 92 ? ? ? B . n B 1 96 ASP 96 93 ? ? ? B . n B 1 97 GLU 97 94 ? ? ? B . n B 1 98 GLU 98 95 ? ? ? B . n B 1 99 ASN 99 96 ? ? ? B . n B 1 100 GLY 100 97 ? ? ? B . n B 1 101 ALA 101 98 ? ? ? B . n B 1 102 ASP 102 99 ? ? ? B . n B 1 103 ALA 103 100 ? ? ? B . n B 1 104 PRO 104 101 ? ? ? B . n B 1 105 ASP 105 102 ? ? ? B . n B 1 106 GLY 106 103 ? ? ? B . n B 1 107 PRO 107 104 ? ? ? B . n B 1 108 GLY 108 105 ? ? ? B . n B 1 109 ILE 109 106 ? ? ? B . n B 1 110 ASN 110 107 ? ? ? B . n B 1 111 SER 111 108 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 109 2 SO4 SO4 A . D 2 SO4 1 109 1 SO4 SO4 B . E 3 HOH 1 110 1 HOH HOH A . E 3 HOH 2 111 5 HOH HOH A . E 3 HOH 3 112 6 HOH HOH A . E 3 HOH 4 113 12 HOH HOH A . E 3 HOH 5 114 13 HOH HOH A . E 3 HOH 6 115 16 HOH HOH A . E 3 HOH 7 116 17 HOH HOH A . E 3 HOH 8 117 18 HOH HOH A . E 3 HOH 9 118 19 HOH HOH A . E 3 HOH 10 119 20 HOH HOH A . E 3 HOH 11 120 21 HOH HOH A . E 3 HOH 12 121 22 HOH HOH A . E 3 HOH 13 122 23 HOH HOH A . E 3 HOH 14 123 24 HOH HOH A . E 3 HOH 15 124 27 HOH HOH A . E 3 HOH 16 125 28 HOH HOH A . E 3 HOH 17 126 29 HOH HOH A . E 3 HOH 18 127 30 HOH HOH A . E 3 HOH 19 128 31 HOH HOH A . E 3 HOH 20 129 43 HOH HOH A . E 3 HOH 21 130 44 HOH HOH A . E 3 HOH 22 131 45 HOH HOH A . E 3 HOH 23 132 46 HOH HOH A . E 3 HOH 24 133 47 HOH HOH A . E 3 HOH 25 134 48 HOH HOH A . E 3 HOH 26 135 49 HOH HOH A . F 3 HOH 1 110 2 HOH HOH B . F 3 HOH 2 111 3 HOH HOH B . F 3 HOH 3 112 4 HOH HOH B . F 3 HOH 4 113 7 HOH HOH B . F 3 HOH 5 114 8 HOH HOH B . F 3 HOH 6 115 9 HOH HOH B . F 3 HOH 7 116 10 HOH HOH B . F 3 HOH 8 117 11 HOH HOH B . F 3 HOH 9 118 14 HOH HOH B . F 3 HOH 10 119 15 HOH HOH B . F 3 HOH 11 120 25 HOH HOH B . F 3 HOH 12 121 26 HOH HOH B . F 3 HOH 13 122 32 HOH HOH B . F 3 HOH 14 123 33 HOH HOH B . F 3 HOH 15 124 34 HOH HOH B . F 3 HOH 16 125 35 HOH HOH B . F 3 HOH 17 126 36 HOH HOH B . F 3 HOH 18 127 37 HOH HOH B . F 3 HOH 19 128 38 HOH HOH B . F 3 HOH 20 129 39 HOH HOH B . F 3 HOH 21 130 40 HOH HOH B . F 3 HOH 22 131 41 HOH HOH B . F 3 HOH 23 132 42 HOH HOH B . F 3 HOH 24 133 50 HOH HOH B . F 3 HOH 25 134 51 HOH HOH B . F 3 HOH 26 135 52 HOH HOH B . F 3 HOH 27 136 53 HOH HOH B . F 3 HOH 28 137 54 HOH HOH B . F 3 HOH 29 138 55 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 11 A MSE 8 ? MET SELENOMETHIONINE 3 B MSE 4 B MSE 1 ? MET SELENOMETHIONINE 4 B MSE 11 B MSE 8 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 1670 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SBC-Collect 'data collection' . ? 2 HKL-3000 'data collection' . ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 HKL-3000 phasing . ? 6 SHELXCD phasing . ? 7 SHELXD phasing . ? 8 MLPHARE phasing . ? 9 RESOLVE phasing . ? 10 ARP/wARP 'model building' . ? 11 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 2 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 2 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.82 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.48 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 83 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 60.30 _pdbx_validate_torsion.psi 62.95 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN 87 ? A ASN 90 3 1 Y 1 A ARG 88 ? A ARG 91 4 1 Y 1 A GLY 89 ? A GLY 92 5 1 Y 1 A ASN 90 ? A ASN 93 6 1 Y 1 A SER 91 ? A SER 94 7 1 Y 1 A THR 92 ? A THR 95 8 1 Y 1 A ASP 93 ? A ASP 96 9 1 Y 1 A GLU 94 ? A GLU 97 10 1 Y 1 A GLU 95 ? A GLU 98 11 1 Y 1 A ASN 96 ? A ASN 99 12 1 Y 1 A GLY 97 ? A GLY 100 13 1 Y 1 A ALA 98 ? A ALA 101 14 1 Y 1 A ASP 99 ? A ASP 102 15 1 Y 1 A ALA 100 ? A ALA 103 16 1 Y 1 A PRO 101 ? A PRO 104 17 1 Y 1 A ASP 102 ? A ASP 105 18 1 Y 1 A GLY 103 ? A GLY 106 19 1 Y 1 A PRO 104 ? A PRO 107 20 1 Y 1 A GLY 105 ? A GLY 108 21 1 Y 1 A ILE 106 ? A ILE 109 22 1 Y 1 A ASN 107 ? A ASN 110 23 1 Y 1 A SER 108 ? A SER 111 24 1 Y 1 B SER -2 ? B SER 1 25 1 Y 1 B ARG 88 ? B ARG 91 26 1 Y 1 B GLY 89 ? B GLY 92 27 1 Y 1 B ASN 90 ? B ASN 93 28 1 Y 1 B SER 91 ? B SER 94 29 1 Y 1 B THR 92 ? B THR 95 30 1 Y 1 B ASP 93 ? B ASP 96 31 1 Y 1 B GLU 94 ? B GLU 97 32 1 Y 1 B GLU 95 ? B GLU 98 33 1 Y 1 B ASN 96 ? B ASN 99 34 1 Y 1 B GLY 97 ? B GLY 100 35 1 Y 1 B ALA 98 ? B ALA 101 36 1 Y 1 B ASP 99 ? B ASP 102 37 1 Y 1 B ALA 100 ? B ALA 103 38 1 Y 1 B PRO 101 ? B PRO 104 39 1 Y 1 B ASP 102 ? B ASP 105 40 1 Y 1 B GLY 103 ? B GLY 106 41 1 Y 1 B PRO 104 ? B PRO 107 42 1 Y 1 B GLY 105 ? B GLY 108 43 1 Y 1 B ILE 106 ? B ILE 109 44 1 Y 1 B ASN 107 ? B ASN 110 45 1 Y 1 B SER 108 ? B SER 111 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #