data_3BBD # _entry.id 3BBD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BBD RCSB RCSB045313 WWPDB D_1000045313 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BBE 'M. jannaschii Nep1' unspecified PDB 3BBH 'M. jannaschii Nep1 complexed with Sinefungin' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BBD _pdbx_database_status.recvd_initial_deposition_date 2007-11-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Taylor, A.B.' 1 'Meyer, B.' 2 'Leal, B.Z.' 3 'Kotter, P.' 4 'Hart, P.J.' 5 'Entian, K.-D.' 6 'Wohnert, J.' 7 # _citation.id primary _citation.title 'The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 36 _citation.page_first 1542 _citation.page_last 1554 _citation.year 2008 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18208838 _citation.pdbx_database_id_DOI 10.1093/nar/gkm1172 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Taylor, A.B.' 1 primary 'Meyer, B.' 2 primary 'Leal, B.Z.' 3 primary 'Kotter, P.' 4 primary 'Schirf, V.' 5 primary 'Demeler, B.' 6 primary 'Hart, P.J.' 7 primary 'Entian, K.D.' 8 primary 'Wohnert, J.' 9 # _cell.entry_id 3BBD _cell.length_a 84.894 _cell.length_b 91.121 _cell.length_c 93.713 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BBD _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribosome biogenesis protein NEP1-like' 24453.844 2 ? ? ? ? 2 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 7 ? ? ? ? 4 water nat water 18.015 265 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)TYNIILAKSALELIPEEIKNKIRKSRVYKYDILDSNYHYKA(MSE)EKLKDKE(MSE)RGRPDIIHISLLNILDS PINHEKKLNIYIHTYDDKVLKINPETRLPRNYFRFLGV(MSE)EKVLKGERNHLIK(MSE)EEKTLEDLLNEINAKKIAI (MSE)TKTGKLTHPKLLKEYDTFIIGGFPYGKLKINKEKVFGDIKEISIYNKGL(MSE)AWTVCGIICYSLSF ; _entity_poly.pdbx_seq_one_letter_code_can ;MTYNIILAKSALELIPEEIKNKIRKSRVYKYDILDSNYHYKAMEKLKDKEMRGRPDIIHISLLNILDSPINHEKKLNIYI HTYDDKVLKINPETRLPRNYFRFLGVMEKVLKGERNHLIKMEEKTLEDLLNEINAKKIAIMTKTGKLTHPKLLKEYDTFI IGGFPYGKLKINKEKVFGDIKEISIYNKGLMAWTVCGIICYSLSF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 THR n 1 3 TYR n 1 4 ASN n 1 5 ILE n 1 6 ILE n 1 7 LEU n 1 8 ALA n 1 9 LYS n 1 10 SER n 1 11 ALA n 1 12 LEU n 1 13 GLU n 1 14 LEU n 1 15 ILE n 1 16 PRO n 1 17 GLU n 1 18 GLU n 1 19 ILE n 1 20 LYS n 1 21 ASN n 1 22 LYS n 1 23 ILE n 1 24 ARG n 1 25 LYS n 1 26 SER n 1 27 ARG n 1 28 VAL n 1 29 TYR n 1 30 LYS n 1 31 TYR n 1 32 ASP n 1 33 ILE n 1 34 LEU n 1 35 ASP n 1 36 SER n 1 37 ASN n 1 38 TYR n 1 39 HIS n 1 40 TYR n 1 41 LYS n 1 42 ALA n 1 43 MSE n 1 44 GLU n 1 45 LYS n 1 46 LEU n 1 47 LYS n 1 48 ASP n 1 49 LYS n 1 50 GLU n 1 51 MSE n 1 52 ARG n 1 53 GLY n 1 54 ARG n 1 55 PRO n 1 56 ASP n 1 57 ILE n 1 58 ILE n 1 59 HIS n 1 60 ILE n 1 61 SER n 1 62 LEU n 1 63 LEU n 1 64 ASN n 1 65 ILE n 1 66 LEU n 1 67 ASP n 1 68 SER n 1 69 PRO n 1 70 ILE n 1 71 ASN n 1 72 HIS n 1 73 GLU n 1 74 LYS n 1 75 LYS n 1 76 LEU n 1 77 ASN n 1 78 ILE n 1 79 TYR n 1 80 ILE n 1 81 HIS n 1 82 THR n 1 83 TYR n 1 84 ASP n 1 85 ASP n 1 86 LYS n 1 87 VAL n 1 88 LEU n 1 89 LYS n 1 90 ILE n 1 91 ASN n 1 92 PRO n 1 93 GLU n 1 94 THR n 1 95 ARG n 1 96 LEU n 1 97 PRO n 1 98 ARG n 1 99 ASN n 1 100 TYR n 1 101 PHE n 1 102 ARG n 1 103 PHE n 1 104 LEU n 1 105 GLY n 1 106 VAL n 1 107 MSE n 1 108 GLU n 1 109 LYS n 1 110 VAL n 1 111 LEU n 1 112 LYS n 1 113 GLY n 1 114 GLU n 1 115 ARG n 1 116 ASN n 1 117 HIS n 1 118 LEU n 1 119 ILE n 1 120 LYS n 1 121 MSE n 1 122 GLU n 1 123 GLU n 1 124 LYS n 1 125 THR n 1 126 LEU n 1 127 GLU n 1 128 ASP n 1 129 LEU n 1 130 LEU n 1 131 ASN n 1 132 GLU n 1 133 ILE n 1 134 ASN n 1 135 ALA n 1 136 LYS n 1 137 LYS n 1 138 ILE n 1 139 ALA n 1 140 ILE n 1 141 MSE n 1 142 THR n 1 143 LYS n 1 144 THR n 1 145 GLY n 1 146 LYS n 1 147 LEU n 1 148 THR n 1 149 HIS n 1 150 PRO n 1 151 LYS n 1 152 LEU n 1 153 LEU n 1 154 LYS n 1 155 GLU n 1 156 TYR n 1 157 ASP n 1 158 THR n 1 159 PHE n 1 160 ILE n 1 161 ILE n 1 162 GLY n 1 163 GLY n 1 164 PHE n 1 165 PRO n 1 166 TYR n 1 167 GLY n 1 168 LYS n 1 169 LEU n 1 170 LYS n 1 171 ILE n 1 172 ASN n 1 173 LYS n 1 174 GLU n 1 175 LYS n 1 176 VAL n 1 177 PHE n 1 178 GLY n 1 179 ASP n 1 180 ILE n 1 181 LYS n 1 182 GLU n 1 183 ILE n 1 184 SER n 1 185 ILE n 1 186 TYR n 1 187 ASN n 1 188 LYS n 1 189 GLY n 1 190 LEU n 1 191 MSE n 1 192 ALA n 1 193 TRP n 1 194 THR n 1 195 VAL n 1 196 CYS n 1 197 GLY n 1 198 ILE n 1 199 ILE n 1 200 CYS n 1 201 TYR n 1 202 SER n 1 203 LEU n 1 204 SER n 1 205 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Methanocaldococcus _entity_src_gen.pdbx_gene_src_gene Nep1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanocaldococcus jannaschii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2190 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NEP1_METJA _struct_ref.pdbx_db_accession Q57977 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTYNIILAKSALELIPEEIKNKIRKSRVYKYDILDSNYHYKAMEKLKDKEMRGRPDIIHISLLNILDSPINHEKKLNIYI HTYDDKVLKINPETRLPRNYFRFLGVMEKVLKGERNHLIKMEEKTLEDLLNEINAKKIAIMTKTGKLTHPKLLKEYDTFI IGGFPYGKLKINKEKVFGDIKEISIYNKGLMAWTVCGIICYSLSF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BBD A 1 ? 205 ? Q57977 1 ? 205 ? 1 205 2 1 3BBD B 1 ? 205 ? Q57977 1 ? 205 ? 1 205 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3BBD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.71 _exptl_crystal.density_percent_sol 66.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pdbx_details ;100 mM BisTris-propane, 6-10% polyethylene glycol 400, 30-48% glycerol and 0-400 mM trimethylamine-N-oxide, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-07-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9797 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9797 # _reflns.entry_id 3BBD _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 39501 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.107 _reflns.pdbx_netI_over_sigmaI 17.5 _reflns.B_iso_Wilson_estimate 30.57 _reflns.pdbx_redundancy 7.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.23 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.565 _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy 6.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 7501 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BBD _refine.ls_number_reflns_obs 39501 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.856 _refine.ls_d_res_high 2.15 _refine.ls_percent_reflns_obs 99.25 _refine.ls_R_factor_obs 0.1819 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1798 _refine.ls_R_factor_R_free 0.221 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 3767 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 37.10 _refine.aniso_B[1][1] 0.1553 _refine.aniso_B[2][2] 2.1253 _refine.aniso_B[3][3] -2.2806 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3372 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 94 _refine_hist.number_atoms_solvent 265 _refine_hist.number_atoms_total 3731 _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 46.856 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? f_angle_deg 1.198 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.15 _refine_ls_shell.d_res_low 2.1853 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.2158 _refine_ls_shell.percent_reflns_obs 86.73 _refine_ls_shell.R_factor_R_free 0.2539 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 140 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2470 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BBD _struct.title 'M. jannaschii Nep1 complexed with S-adenosyl-homocysteine' _struct.pdbx_descriptor 'Probable ribosome biogenesis protein NEP1-like' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BBD _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'methyltransferase, ribosome biogenesis, S-adenosyl-methionine, S-adenosyl-homocysteine, rRNA processing, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 16 ? ILE A 23 ? PRO A 16 ILE A 23 5 ? 8 HELX_P HELX_P2 2 ASP A 35 ? TYR A 40 ? ASP A 35 TYR A 40 1 ? 6 HELX_P HELX_P3 3 ASP A 48 ? ARG A 52 ? ASP A 48 ARG A 52 5 ? 5 HELX_P HELX_P4 4 ARG A 54 ? ASP A 67 ? ARG A 54 ASP A 67 1 ? 14 HELX_P HELX_P5 5 SER A 68 ? GLU A 73 ? SER A 68 GLU A 73 1 ? 6 HELX_P HELX_P6 6 ASN A 99 ? LYS A 112 ? ASN A 99 LYS A 112 1 ? 14 HELX_P HELX_P7 7 THR A 125 ? ILE A 133 ? THR A 125 ILE A 133 1 ? 9 HELX_P HELX_P8 8 HIS A 149 ? TYR A 156 ? HIS A 149 TYR A 156 5 ? 8 HELX_P HELX_P9 9 ASN A 172 ? VAL A 176 ? ASN A 172 VAL A 176 5 ? 5 HELX_P HELX_P10 10 MSE A 191 ? PHE A 205 ? MSE A 191 PHE A 205 1 ? 15 HELX_P HELX_P11 11 PRO B 16 ? ILE B 23 ? PRO B 16 ILE B 23 5 ? 8 HELX_P HELX_P12 12 ASP B 35 ? TYR B 40 ? ASP B 35 TYR B 40 1 ? 6 HELX_P HELX_P13 13 LYS B 41 ? GLU B 44 ? LYS B 41 GLU B 44 5 ? 4 HELX_P HELX_P14 14 ASP B 48 ? ARG B 52 ? ASP B 48 ARG B 52 5 ? 5 HELX_P HELX_P15 15 ARG B 54 ? SER B 68 ? ARG B 54 SER B 68 1 ? 15 HELX_P HELX_P16 16 SER B 68 ? GLU B 73 ? SER B 68 GLU B 73 1 ? 6 HELX_P HELX_P17 17 ASN B 99 ? LYS B 112 ? ASN B 99 LYS B 112 1 ? 14 HELX_P HELX_P18 18 THR B 125 ? ILE B 133 ? THR B 125 ILE B 133 1 ? 9 HELX_P HELX_P19 19 HIS B 149 ? TYR B 156 ? HIS B 149 TYR B 156 5 ? 8 HELX_P HELX_P20 20 ASN B 172 ? VAL B 176 ? ASN B 172 VAL B 176 5 ? 5 HELX_P HELX_P21 21 MSE B 191 ? PHE B 205 ? MSE B 191 PHE B 205 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 42 C ? ? ? 1_555 A MSE 43 N ? ? A ALA 42 A MSE 43 1_555 ? ? ? ? ? ? ? 1.332 ? covale2 covale ? ? A MSE 43 C ? ? ? 1_555 A GLU 44 N ? ? A MSE 43 A GLU 44 1_555 ? ? ? ? ? ? ? 1.334 ? covale3 covale ? ? A GLU 50 C ? ? ? 1_555 A MSE 51 N ? ? A GLU 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale ? ? A MSE 51 C ? ? ? 1_555 A ARG 52 N ? ? A MSE 51 A ARG 52 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A VAL 106 C ? ? ? 1_555 A MSE 107 N ? ? A VAL 106 A MSE 107 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 107 C ? ? ? 1_555 A GLU 108 N ? ? A MSE 107 A GLU 108 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale ? ? A LYS 120 C ? ? ? 1_555 A MSE 121 N ? ? A LYS 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A MSE 121 C ? ? ? 1_555 A GLU 122 N ? ? A MSE 121 A GLU 122 1_555 ? ? ? ? ? ? ? 1.332 ? covale9 covale ? ? A ILE 140 C ? ? ? 1_555 A MSE 141 N ? ? A ILE 140 A MSE 141 1_555 ? ? ? ? ? ? ? 1.323 ? covale10 covale ? ? A MSE 141 C ? ? ? 1_555 A THR 142 N ? ? A MSE 141 A THR 142 1_555 ? ? ? ? ? ? ? 1.327 ? covale11 covale ? ? A LEU 190 C ? ? ? 1_555 A MSE 191 N ? ? A LEU 190 A MSE 191 1_555 ? ? ? ? ? ? ? 1.331 ? covale12 covale ? ? A MSE 191 C ? ? ? 1_555 A ALA 192 N ? ? A MSE 191 A ALA 192 1_555 ? ? ? ? ? ? ? 1.333 ? covale13 covale ? ? B ALA 42 C ? ? ? 1_555 B MSE 43 N ? ? B ALA 42 B MSE 43 1_555 ? ? ? ? ? ? ? 1.335 ? covale14 covale ? ? B MSE 43 C ? ? ? 1_555 B GLU 44 N ? ? B MSE 43 B GLU 44 1_555 ? ? ? ? ? ? ? 1.333 ? covale15 covale ? ? B GLU 50 C ? ? ? 1_555 B MSE 51 N ? ? B GLU 50 B MSE 51 1_555 ? ? ? ? ? ? ? 1.329 ? covale16 covale ? ? B MSE 51 C ? ? ? 1_555 B ARG 52 N ? ? B MSE 51 B ARG 52 1_555 ? ? ? ? ? ? ? 1.334 ? covale17 covale ? ? B VAL 106 C ? ? ? 1_555 B MSE 107 N ? ? B VAL 106 B MSE 107 1_555 ? ? ? ? ? ? ? 1.336 ? covale18 covale ? ? B MSE 107 C ? ? ? 1_555 B GLU 108 N ? ? B MSE 107 B GLU 108 1_555 ? ? ? ? ? ? ? 1.336 ? covale19 covale ? ? B LYS 120 C ? ? ? 1_555 B MSE 121 N ? ? B LYS 120 B MSE 121 1_555 ? ? ? ? ? ? ? 1.330 ? covale20 covale ? ? B MSE 121 C ? ? ? 1_555 B GLU 122 N ? ? B MSE 121 B GLU 122 1_555 ? ? ? ? ? ? ? 1.332 ? covale21 covale ? ? B ILE 140 C ? ? ? 1_555 B MSE 141 N ? ? B ILE 140 B MSE 141 1_555 ? ? ? ? ? ? ? 1.324 ? covale22 covale ? ? B MSE 141 C ? ? ? 1_555 B THR 142 N ? ? B MSE 141 B THR 142 1_555 ? ? ? ? ? ? ? 1.323 ? covale23 covale ? ? B LEU 190 C ? ? ? 1_555 B MSE 191 N ? ? B LEU 190 B MSE 191 1_555 ? ? ? ? ? ? ? 1.331 ? covale24 covale ? ? B MSE 191 C ? ? ? 1_555 B ALA 192 N ? ? B MSE 191 B ALA 192 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 119 ? GLU A 123 ? ILE A 119 GLU A 123 A 2 LYS A 86 ? ILE A 90 ? LYS A 86 ILE A 90 A 3 LEU A 76 ? THR A 82 ? LEU A 76 THR A 82 A 4 TYR A 3 ? SER A 10 ? TYR A 3 SER A 10 A 5 THR A 158 ? GLY A 162 ? THR A 158 GLY A 162 A 6 LYS A 137 ? MSE A 141 ? LYS A 137 MSE A 141 A 7 ASP A 179 ? SER A 184 ? ASP A 179 SER A 184 A 8 LYS A 146 ? LEU A 147 ? LYS A 146 LEU A 147 B 1 ILE B 119 ? GLU B 123 ? ILE B 119 GLU B 123 B 2 LYS B 86 ? ILE B 90 ? LYS B 86 ILE B 90 B 3 LEU B 76 ? THR B 82 ? LEU B 76 THR B 82 B 4 TYR B 3 ? SER B 10 ? TYR B 3 SER B 10 B 5 THR B 158 ? GLY B 162 ? THR B 158 GLY B 162 B 6 LYS B 137 ? MSE B 141 ? LYS B 137 MSE B 141 B 7 ASP B 179 ? SER B 184 ? ASP B 179 SER B 184 B 8 LYS B 146 ? LEU B 147 ? LYS B 146 LEU B 147 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 122 ? O GLU A 122 N VAL A 87 ? N VAL A 87 A 2 3 O LEU A 88 ? O LEU A 88 N ILE A 80 ? N ILE A 80 A 3 4 O ASN A 77 ? O ASN A 77 N TYR A 3 ? N TYR A 3 A 4 5 N ILE A 6 ? N ILE A 6 O PHE A 159 ? O PHE A 159 A 5 6 O THR A 158 ? O THR A 158 N ALA A 139 ? N ALA A 139 A 6 7 N ILE A 138 ? N ILE A 138 O ASP A 179 ? O ASP A 179 A 7 8 O SER A 184 ? O SER A 184 N LYS A 146 ? N LYS A 146 B 1 2 O GLU B 122 ? O GLU B 122 N VAL B 87 ? N VAL B 87 B 2 3 O LEU B 88 ? O LEU B 88 N ILE B 80 ? N ILE B 80 B 3 4 O HIS B 81 ? O HIS B 81 N LEU B 7 ? N LEU B 7 B 4 5 N ILE B 6 ? N ILE B 6 O ILE B 161 ? O ILE B 161 B 5 6 O ILE B 160 ? O ILE B 160 N MSE B 141 ? N MSE B 141 B 6 7 N ILE B 138 ? N ILE B 138 O ASP B 179 ? O ASP B 179 B 7 8 O SER B 184 ? O SER B 184 N LYS B 146 ? N LYS B 146 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE SAH A 206' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE GOL A 207' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 208' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 209' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 210' AC6 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE SAH B 207' AC7 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL B 208' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL B 209' AC9 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL B 210' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 MSE A 141 ? MSE A 141 . ? 1_555 ? 2 AC1 17 THR A 142 ? THR A 142 . ? 1_555 ? 3 AC1 17 LYS A 143 ? LYS A 143 . ? 1_555 ? 4 AC1 17 ILE A 161 ? ILE A 161 . ? 1_555 ? 5 AC1 17 GLY A 162 ? GLY A 162 . ? 1_555 ? 6 AC1 17 PHE A 164 ? PHE A 164 . ? 1_555 ? 7 AC1 17 PRO A 165 ? PRO A 165 . ? 1_555 ? 8 AC1 17 GLY A 167 ? GLY A 167 . ? 1_555 ? 9 AC1 17 ILE A 183 ? ILE A 183 . ? 1_555 ? 10 AC1 17 SER A 184 ? SER A 184 . ? 1_555 ? 11 AC1 17 ILE A 185 ? ILE A 185 . ? 1_555 ? 12 AC1 17 TYR A 186 ? TYR A 186 . ? 1_555 ? 13 AC1 17 LYS A 188 ? LYS A 188 . ? 1_555 ? 14 AC1 17 LEU A 190 ? LEU A 190 . ? 1_555 ? 15 AC1 17 VAL A 195 ? VAL A 195 . ? 1_555 ? 16 AC1 17 HOH L . ? HOH A 327 . ? 1_555 ? 17 AC1 17 HOH L . ? HOH A 328 . ? 1_555 ? 18 AC2 8 ASP A 128 ? ASP A 128 . ? 1_555 ? 19 AC2 8 HOH L . ? HOH A 321 . ? 1_555 ? 20 AC2 8 HOH L . ? HOH A 323 . ? 1_555 ? 21 AC2 8 LYS B 22 ? LYS B 22 . ? 4_565 ? 22 AC2 8 ILE B 23 ? ILE B 23 . ? 4_565 ? 23 AC2 8 ARG B 24 ? ARG B 24 . ? 4_565 ? 24 AC2 8 TYR B 38 ? TYR B 38 . ? 4_565 ? 25 AC2 8 HIS B 39 ? HIS B 39 . ? 4_565 ? 26 AC3 6 THR A 2 ? THR A 2 . ? 1_555 ? 27 AC3 6 ASN A 4 ? ASN A 4 . ? 1_555 ? 28 AC3 6 ASN A 77 ? ASN A 77 . ? 1_555 ? 29 AC3 6 ILE A 133 ? ILE A 133 . ? 1_555 ? 30 AC3 6 ASN A 134 ? ASN A 134 . ? 1_555 ? 31 AC3 6 ASP A 157 ? ASP A 157 . ? 1_555 ? 32 AC4 4 LYS A 124 ? LYS A 124 . ? 1_555 ? 33 AC4 4 GLU A 132 ? GLU A 132 . ? 1_555 ? 34 AC4 4 ILE A 133 ? ILE A 133 . ? 1_555 ? 35 AC4 4 HOH L . ? HOH A 244 . ? 1_555 ? 36 AC5 4 ASN A 71 ? ASN A 71 . ? 1_555 ? 37 AC5 4 HIS A 72 ? HIS A 72 . ? 1_555 ? 38 AC5 4 LYS A 74 ? LYS A 74 . ? 1_555 ? 39 AC5 4 PRO A 92 ? PRO A 92 . ? 1_555 ? 40 AC6 16 MSE B 141 ? MSE B 141 . ? 1_555 ? 41 AC6 16 THR B 142 ? THR B 142 . ? 1_555 ? 42 AC6 16 LYS B 143 ? LYS B 143 . ? 1_555 ? 43 AC6 16 ILE B 161 ? ILE B 161 . ? 1_555 ? 44 AC6 16 GLY B 162 ? GLY B 162 . ? 1_555 ? 45 AC6 16 PHE B 164 ? PHE B 164 . ? 1_555 ? 46 AC6 16 PRO B 165 ? PRO B 165 . ? 1_555 ? 47 AC6 16 GLY B 167 ? GLY B 167 . ? 1_555 ? 48 AC6 16 SER B 184 ? SER B 184 . ? 1_555 ? 49 AC6 16 ILE B 185 ? ILE B 185 . ? 1_555 ? 50 AC6 16 TYR B 186 ? TYR B 186 . ? 1_555 ? 51 AC6 16 LYS B 188 ? LYS B 188 . ? 1_555 ? 52 AC6 16 LEU B 190 ? LEU B 190 . ? 1_555 ? 53 AC6 16 VAL B 195 ? VAL B 195 . ? 1_555 ? 54 AC6 16 HOH M . ? HOH B 283 . ? 1_555 ? 55 AC6 16 HOH M . ? HOH B 357 . ? 1_555 ? 56 AC7 6 LYS A 136 ? LYS A 136 . ? 3_645 ? 57 AC7 6 TYR B 79 ? TYR B 79 . ? 1_555 ? 58 AC7 6 LYS B 89 ? LYS B 89 . ? 1_555 ? 59 AC7 6 GLU B 132 ? GLU B 132 . ? 1_555 ? 60 AC7 6 ILE B 133 ? ILE B 133 . ? 1_555 ? 61 AC7 6 HOH M . ? HOH B 300 . ? 1_555 ? 62 AC8 6 TYR A 201 ? TYR A 201 . ? 1_555 ? 63 AC8 6 SER A 202 ? SER A 202 . ? 1_555 ? 64 AC8 6 PHE A 205 ? PHE A 205 . ? 1_555 ? 65 AC8 6 PRO B 150 ? PRO B 150 . ? 1_555 ? 66 AC8 6 TYR B 201 ? TYR B 201 . ? 1_555 ? 67 AC8 6 SER B 202 ? SER B 202 . ? 1_555 ? 68 AC9 5 THR B 2 ? THR B 2 . ? 1_555 ? 69 AC9 5 ASN B 4 ? ASN B 4 . ? 1_555 ? 70 AC9 5 ILE B 133 ? ILE B 133 . ? 1_555 ? 71 AC9 5 ASN B 134 ? ASN B 134 . ? 1_555 ? 72 AC9 5 ASP B 157 ? ASP B 157 . ? 1_555 ? # _database_PDB_matrix.entry_id 3BBD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3BBD _atom_sites.fract_transf_matrix[1][1] 0.011779 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010974 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010671 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 HIS 39 39 39 HIS HIS A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 MSE 43 43 43 MSE MSE A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 MSE 51 51 51 MSE MSE A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 HIS 81 81 81 HIS HIS A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 MSE 107 107 107 MSE MSE A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 MSE 121 121 121 MSE MSE A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 MSE 141 141 141 MSE MSE A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 PRO 150 150 150 PRO PRO A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 TYR 156 156 156 TYR TYR A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 TYR 166 166 166 TYR TYR A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 ASN 172 172 172 ASN ASN A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 SER 184 184 184 SER SER A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 TYR 186 186 186 TYR TYR A . n A 1 187 ASN 187 187 187 ASN ASN A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 MSE 191 191 191 MSE MSE A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 TRP 193 193 193 TRP TRP A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 CYS 196 196 196 CYS CYS A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 CYS 200 200 200 CYS CYS A . n A 1 201 TYR 201 201 201 TYR TYR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 LEU 203 203 203 LEU LEU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 PHE 205 205 205 PHE PHE A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 THR 2 2 2 THR THR B . n B 1 3 TYR 3 3 3 TYR TYR B . n B 1 4 ASN 4 4 4 ASN ASN B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 SER 10 10 10 SER SER B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 ILE 19 19 19 ILE ILE B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 ASN 21 21 21 ASN ASN B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 ILE 23 23 23 ILE ILE B . n B 1 24 ARG 24 24 24 ARG ARG B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 TYR 29 29 29 TYR TYR B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 TYR 31 31 31 TYR TYR B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 TYR 38 38 38 TYR TYR B . n B 1 39 HIS 39 39 39 HIS HIS B . n B 1 40 TYR 40 40 40 TYR TYR B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 MSE 43 43 43 MSE MSE B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 LYS 47 47 47 LYS LYS B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 MSE 51 51 51 MSE MSE B . n B 1 52 ARG 52 52 52 ARG ARG B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 ASP 56 56 56 ASP ASP B . n B 1 57 ILE 57 57 57 ILE ILE B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 HIS 59 59 59 HIS HIS B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 SER 61 61 61 SER SER B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 ASN 64 64 64 ASN ASN B . n B 1 65 ILE 65 65 65 ILE ILE B . n B 1 66 LEU 66 66 66 LEU LEU B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 SER 68 68 68 SER SER B . n B 1 69 PRO 69 69 69 PRO PRO B . n B 1 70 ILE 70 70 70 ILE ILE B . n B 1 71 ASN 71 71 71 ASN ASN B . n B 1 72 HIS 72 72 72 HIS HIS B . n B 1 73 GLU 73 73 73 GLU GLU B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 LYS 75 75 75 LYS LYS B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 ASN 77 77 77 ASN ASN B . n B 1 78 ILE 78 78 78 ILE ILE B . n B 1 79 TYR 79 79 79 TYR TYR B . n B 1 80 ILE 80 80 80 ILE ILE B . n B 1 81 HIS 81 81 81 HIS HIS B . n B 1 82 THR 82 82 82 THR THR B . n B 1 83 TYR 83 83 83 TYR TYR B . n B 1 84 ASP 84 84 84 ASP ASP B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 LYS 86 86 86 LYS LYS B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 LEU 88 88 88 LEU LEU B . n B 1 89 LYS 89 89 89 LYS LYS B . n B 1 90 ILE 90 90 90 ILE ILE B . n B 1 91 ASN 91 91 91 ASN ASN B . n B 1 92 PRO 92 92 92 PRO PRO B . n B 1 93 GLU 93 93 93 GLU GLU B . n B 1 94 THR 94 94 94 THR THR B . n B 1 95 ARG 95 95 95 ARG ARG B . n B 1 96 LEU 96 96 96 LEU LEU B . n B 1 97 PRO 97 97 97 PRO PRO B . n B 1 98 ARG 98 98 98 ARG ARG B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 TYR 100 100 100 TYR TYR B . n B 1 101 PHE 101 101 101 PHE PHE B . n B 1 102 ARG 102 102 102 ARG ARG B . n B 1 103 PHE 103 103 103 PHE PHE B . n B 1 104 LEU 104 104 104 LEU LEU B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 VAL 106 106 106 VAL VAL B . n B 1 107 MSE 107 107 107 MSE MSE B . n B 1 108 GLU 108 108 108 GLU GLU B . n B 1 109 LYS 109 109 109 LYS LYS B . n B 1 110 VAL 110 110 110 VAL VAL B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 LYS 112 112 112 LYS LYS B . n B 1 113 GLY 113 113 113 GLY GLY B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 ARG 115 115 115 ARG ARG B . n B 1 116 ASN 116 116 116 ASN ASN B . n B 1 117 HIS 117 117 117 HIS HIS B . n B 1 118 LEU 118 118 118 LEU LEU B . n B 1 119 ILE 119 119 119 ILE ILE B . n B 1 120 LYS 120 120 120 LYS LYS B . n B 1 121 MSE 121 121 121 MSE MSE B . n B 1 122 GLU 122 122 122 GLU GLU B . n B 1 123 GLU 123 123 123 GLU GLU B . n B 1 124 LYS 124 124 124 LYS LYS B . n B 1 125 THR 125 125 125 THR THR B . n B 1 126 LEU 126 126 126 LEU LEU B . n B 1 127 GLU 127 127 127 GLU GLU B . n B 1 128 ASP 128 128 128 ASP ASP B . n B 1 129 LEU 129 129 129 LEU LEU B . n B 1 130 LEU 130 130 130 LEU LEU B . n B 1 131 ASN 131 131 131 ASN ASN B . n B 1 132 GLU 132 132 132 GLU GLU B . n B 1 133 ILE 133 133 133 ILE ILE B . n B 1 134 ASN 134 134 134 ASN ASN B . n B 1 135 ALA 135 135 135 ALA ALA B . n B 1 136 LYS 136 136 136 LYS LYS B . n B 1 137 LYS 137 137 137 LYS LYS B . n B 1 138 ILE 138 138 138 ILE ILE B . n B 1 139 ALA 139 139 139 ALA ALA B . n B 1 140 ILE 140 140 140 ILE ILE B . n B 1 141 MSE 141 141 141 MSE MSE B . n B 1 142 THR 142 142 142 THR THR B . n B 1 143 LYS 143 143 143 LYS LYS B . n B 1 144 THR 144 144 144 THR THR B . n B 1 145 GLY 145 145 145 GLY GLY B . n B 1 146 LYS 146 146 146 LYS LYS B . n B 1 147 LEU 147 147 147 LEU LEU B . n B 1 148 THR 148 148 148 THR THR B . n B 1 149 HIS 149 149 149 HIS HIS B . n B 1 150 PRO 150 150 150 PRO PRO B . n B 1 151 LYS 151 151 151 LYS LYS B . n B 1 152 LEU 152 152 152 LEU LEU B . n B 1 153 LEU 153 153 153 LEU LEU B . n B 1 154 LYS 154 154 154 LYS LYS B . n B 1 155 GLU 155 155 155 GLU GLU B . n B 1 156 TYR 156 156 156 TYR TYR B . n B 1 157 ASP 157 157 157 ASP ASP B . n B 1 158 THR 158 158 158 THR THR B . n B 1 159 PHE 159 159 159 PHE PHE B . n B 1 160 ILE 160 160 160 ILE ILE B . n B 1 161 ILE 161 161 161 ILE ILE B . n B 1 162 GLY 162 162 162 GLY GLY B . n B 1 163 GLY 163 163 163 GLY GLY B . n B 1 164 PHE 164 164 164 PHE PHE B . n B 1 165 PRO 165 165 165 PRO PRO B . n B 1 166 TYR 166 166 166 TYR TYR B . n B 1 167 GLY 167 167 167 GLY GLY B . n B 1 168 LYS 168 168 168 LYS LYS B . n B 1 169 LEU 169 169 169 LEU LEU B . n B 1 170 LYS 170 170 170 LYS LYS B . n B 1 171 ILE 171 171 171 ILE ILE B . n B 1 172 ASN 172 172 172 ASN ASN B . n B 1 173 LYS 173 173 173 LYS LYS B . n B 1 174 GLU 174 174 174 GLU GLU B . n B 1 175 LYS 175 175 175 LYS LYS B . n B 1 176 VAL 176 176 176 VAL VAL B . n B 1 177 PHE 177 177 177 PHE PHE B . n B 1 178 GLY 178 178 178 GLY GLY B . n B 1 179 ASP 179 179 179 ASP ASP B . n B 1 180 ILE 180 180 180 ILE ILE B . n B 1 181 LYS 181 181 181 LYS LYS B . n B 1 182 GLU 182 182 182 GLU GLU B . n B 1 183 ILE 183 183 183 ILE ILE B . n B 1 184 SER 184 184 184 SER SER B . n B 1 185 ILE 185 185 185 ILE ILE B . n B 1 186 TYR 186 186 186 TYR TYR B . n B 1 187 ASN 187 187 187 ASN ASN B . n B 1 188 LYS 188 188 188 LYS LYS B . n B 1 189 GLY 189 189 189 GLY GLY B . n B 1 190 LEU 190 190 190 LEU LEU B . n B 1 191 MSE 191 191 191 MSE MSE B . n B 1 192 ALA 192 192 192 ALA ALA B . n B 1 193 TRP 193 193 193 TRP TRP B . n B 1 194 THR 194 194 194 THR THR B . n B 1 195 VAL 195 195 195 VAL VAL B . n B 1 196 CYS 196 196 196 CYS CYS B . n B 1 197 GLY 197 197 197 GLY GLY B . n B 1 198 ILE 198 198 198 ILE ILE B . n B 1 199 ILE 199 199 199 ILE ILE B . n B 1 200 CYS 200 200 200 CYS CYS B . n B 1 201 TYR 201 201 201 TYR TYR B . n B 1 202 SER 202 202 202 SER SER B . n B 1 203 LEU 203 203 203 LEU LEU B . n B 1 204 SER 204 204 204 SER SER B . n B 1 205 PHE 205 205 205 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH 1 206 206 SAH SAH A . D 3 GOL 1 207 206 GOL GOL A . E 3 GOL 1 208 207 GOL GOL A . F 3 GOL 1 209 208 GOL GOL A . G 3 GOL 1 210 209 GOL GOL A . H 2 SAH 1 207 207 SAH SAH B . I 3 GOL 1 208 208 GOL GOL B . J 3 GOL 1 209 209 GOL GOL B . K 3 GOL 1 210 210 GOL GOL B . L 4 HOH 1 211 211 HOH HOH A . L 4 HOH 2 212 212 HOH HOH A . L 4 HOH 3 213 213 HOH HOH A . L 4 HOH 4 214 214 HOH HOH A . L 4 HOH 5 215 215 HOH HOH A . L 4 HOH 6 216 216 HOH HOH A . L 4 HOH 7 217 217 HOH HOH A . L 4 HOH 8 218 218 HOH HOH A . L 4 HOH 9 219 219 HOH HOH A . L 4 HOH 10 220 220 HOH HOH A . L 4 HOH 11 221 221 HOH HOH A . L 4 HOH 12 222 222 HOH HOH A . L 4 HOH 13 223 223 HOH HOH A . L 4 HOH 14 224 224 HOH HOH A . L 4 HOH 15 225 225 HOH HOH A . L 4 HOH 16 226 226 HOH HOH A . L 4 HOH 17 227 227 HOH HOH A . L 4 HOH 18 228 228 HOH HOH A . L 4 HOH 19 229 229 HOH HOH A . L 4 HOH 20 230 230 HOH HOH A . L 4 HOH 21 231 231 HOH HOH A . L 4 HOH 22 232 232 HOH HOH A . L 4 HOH 23 233 233 HOH HOH A . L 4 HOH 24 234 234 HOH HOH A . L 4 HOH 25 235 235 HOH HOH A . L 4 HOH 26 236 236 HOH HOH A . L 4 HOH 27 237 237 HOH HOH A . L 4 HOH 28 238 238 HOH HOH A . L 4 HOH 29 239 239 HOH HOH A . L 4 HOH 30 240 240 HOH HOH A . L 4 HOH 31 241 241 HOH HOH A . L 4 HOH 32 242 242 HOH HOH A . L 4 HOH 33 243 243 HOH HOH A . L 4 HOH 34 244 244 HOH HOH A . L 4 HOH 35 245 245 HOH HOH A . L 4 HOH 36 246 246 HOH HOH A . L 4 HOH 37 247 247 HOH HOH A . L 4 HOH 38 248 248 HOH HOH A . L 4 HOH 39 249 249 HOH HOH A . L 4 HOH 40 250 250 HOH HOH A . L 4 HOH 41 251 251 HOH HOH A . L 4 HOH 42 252 252 HOH HOH A . L 4 HOH 43 253 253 HOH HOH A . L 4 HOH 44 254 254 HOH HOH A . L 4 HOH 45 255 255 HOH HOH A . L 4 HOH 46 256 256 HOH HOH A . L 4 HOH 47 257 257 HOH HOH A . L 4 HOH 48 258 258 HOH HOH A . L 4 HOH 49 259 259 HOH HOH A . L 4 HOH 50 260 260 HOH HOH A . L 4 HOH 51 261 261 HOH HOH A . L 4 HOH 52 262 262 HOH HOH A . L 4 HOH 53 263 263 HOH HOH A . L 4 HOH 54 264 264 HOH HOH A . L 4 HOH 55 265 265 HOH HOH A . L 4 HOH 56 266 266 HOH HOH A . L 4 HOH 57 267 267 HOH HOH A . L 4 HOH 58 268 268 HOH HOH A . L 4 HOH 59 269 269 HOH HOH A . L 4 HOH 60 270 270 HOH HOH A . L 4 HOH 61 271 271 HOH HOH A . L 4 HOH 62 272 272 HOH HOH A . L 4 HOH 63 273 273 HOH HOH A . L 4 HOH 64 274 274 HOH HOH A . L 4 HOH 65 275 275 HOH HOH A . L 4 HOH 66 276 276 HOH HOH A . L 4 HOH 67 277 277 HOH HOH A . L 4 HOH 68 278 278 HOH HOH A . L 4 HOH 69 279 279 HOH HOH A . L 4 HOH 70 280 280 HOH HOH A . L 4 HOH 71 281 281 HOH HOH A . L 4 HOH 72 282 282 HOH HOH A . L 4 HOH 73 283 283 HOH HOH A . L 4 HOH 74 284 284 HOH HOH A . L 4 HOH 75 285 285 HOH HOH A . L 4 HOH 76 286 286 HOH HOH A . L 4 HOH 77 287 287 HOH HOH A . L 4 HOH 78 288 288 HOH HOH A . L 4 HOH 79 289 289 HOH HOH A . L 4 HOH 80 290 290 HOH HOH A . L 4 HOH 81 291 291 HOH HOH A . L 4 HOH 82 292 292 HOH HOH A . L 4 HOH 83 293 293 HOH HOH A . L 4 HOH 84 294 294 HOH HOH A . L 4 HOH 85 295 295 HOH HOH A . L 4 HOH 86 296 296 HOH HOH A . L 4 HOH 87 297 297 HOH HOH A . L 4 HOH 88 298 298 HOH HOH A . L 4 HOH 89 299 299 HOH HOH A . L 4 HOH 90 300 300 HOH HOH A . L 4 HOH 91 301 301 HOH HOH A . L 4 HOH 92 302 302 HOH HOH A . L 4 HOH 93 303 303 HOH HOH A . L 4 HOH 94 304 304 HOH HOH A . L 4 HOH 95 305 305 HOH HOH A . L 4 HOH 96 306 306 HOH HOH A . L 4 HOH 97 307 307 HOH HOH A . L 4 HOH 98 308 308 HOH HOH A . L 4 HOH 99 309 309 HOH HOH A . L 4 HOH 100 310 310 HOH HOH A . L 4 HOH 101 311 311 HOH HOH A . L 4 HOH 102 312 312 HOH HOH A . L 4 HOH 103 313 313 HOH HOH A . L 4 HOH 104 314 314 HOH HOH A . L 4 HOH 105 315 315 HOH HOH A . L 4 HOH 106 316 316 HOH HOH A . L 4 HOH 107 317 317 HOH HOH A . L 4 HOH 108 318 318 HOH HOH A . L 4 HOH 109 319 319 HOH HOH A . L 4 HOH 110 320 320 HOH HOH A . L 4 HOH 111 321 321 HOH HOH A . L 4 HOH 112 322 322 HOH HOH A . L 4 HOH 113 323 323 HOH HOH A . L 4 HOH 114 324 324 HOH HOH A . L 4 HOH 115 325 325 HOH HOH A . L 4 HOH 116 326 210 HOH HOH A . L 4 HOH 117 327 250 HOH HOH A . L 4 HOH 118 328 278 HOH HOH A . M 4 HOH 1 212 212 HOH HOH B . M 4 HOH 2 213 213 HOH HOH B . M 4 HOH 3 214 214 HOH HOH B . M 4 HOH 4 215 215 HOH HOH B . M 4 HOH 5 216 216 HOH HOH B . M 4 HOH 6 217 217 HOH HOH B . M 4 HOH 7 218 218 HOH HOH B . M 4 HOH 8 219 219 HOH HOH B . M 4 HOH 9 220 220 HOH HOH B . M 4 HOH 10 221 221 HOH HOH B . M 4 HOH 11 222 222 HOH HOH B . M 4 HOH 12 223 223 HOH HOH B . M 4 HOH 13 224 224 HOH HOH B . M 4 HOH 14 225 225 HOH HOH B . M 4 HOH 15 226 226 HOH HOH B . M 4 HOH 16 227 227 HOH HOH B . M 4 HOH 17 228 228 HOH HOH B . M 4 HOH 18 229 229 HOH HOH B . M 4 HOH 19 230 230 HOH HOH B . M 4 HOH 20 231 231 HOH HOH B . M 4 HOH 21 232 232 HOH HOH B . M 4 HOH 22 233 233 HOH HOH B . M 4 HOH 23 234 234 HOH HOH B . M 4 HOH 24 235 235 HOH HOH B . M 4 HOH 25 236 236 HOH HOH B . M 4 HOH 26 237 237 HOH HOH B . M 4 HOH 27 238 238 HOH HOH B . M 4 HOH 28 239 239 HOH HOH B . M 4 HOH 29 240 240 HOH HOH B . M 4 HOH 30 241 241 HOH HOH B . M 4 HOH 31 242 242 HOH HOH B . M 4 HOH 32 243 243 HOH HOH B . M 4 HOH 33 244 244 HOH HOH B . M 4 HOH 34 245 245 HOH HOH B . M 4 HOH 35 246 246 HOH HOH B . M 4 HOH 36 247 247 HOH HOH B . M 4 HOH 37 248 248 HOH HOH B . M 4 HOH 38 249 249 HOH HOH B . M 4 HOH 39 251 251 HOH HOH B . M 4 HOH 40 252 252 HOH HOH B . M 4 HOH 41 253 253 HOH HOH B . M 4 HOH 42 254 254 HOH HOH B . M 4 HOH 43 255 255 HOH HOH B . M 4 HOH 44 256 256 HOH HOH B . M 4 HOH 45 257 257 HOH HOH B . M 4 HOH 46 258 258 HOH HOH B . M 4 HOH 47 259 259 HOH HOH B . M 4 HOH 48 260 260 HOH HOH B . M 4 HOH 49 261 261 HOH HOH B . M 4 HOH 50 262 262 HOH HOH B . M 4 HOH 51 263 263 HOH HOH B . M 4 HOH 52 264 264 HOH HOH B . M 4 HOH 53 265 265 HOH HOH B . M 4 HOH 54 266 266 HOH HOH B . M 4 HOH 55 267 267 HOH HOH B . M 4 HOH 56 268 268 HOH HOH B . M 4 HOH 57 269 269 HOH HOH B . M 4 HOH 58 270 270 HOH HOH B . M 4 HOH 59 271 271 HOH HOH B . M 4 HOH 60 272 272 HOH HOH B . M 4 HOH 61 273 273 HOH HOH B . M 4 HOH 62 274 274 HOH HOH B . M 4 HOH 63 275 275 HOH HOH B . M 4 HOH 64 276 276 HOH HOH B . M 4 HOH 65 277 277 HOH HOH B . M 4 HOH 66 279 279 HOH HOH B . M 4 HOH 67 280 280 HOH HOH B . M 4 HOH 68 281 281 HOH HOH B . M 4 HOH 69 282 282 HOH HOH B . M 4 HOH 70 283 283 HOH HOH B . M 4 HOH 71 284 284 HOH HOH B . M 4 HOH 72 285 285 HOH HOH B . M 4 HOH 73 286 286 HOH HOH B . M 4 HOH 74 287 287 HOH HOH B . M 4 HOH 75 288 288 HOH HOH B . M 4 HOH 76 289 289 HOH HOH B . M 4 HOH 77 290 290 HOH HOH B . M 4 HOH 78 291 291 HOH HOH B . M 4 HOH 79 292 292 HOH HOH B . M 4 HOH 80 293 293 HOH HOH B . M 4 HOH 81 294 294 HOH HOH B . M 4 HOH 82 295 295 HOH HOH B . M 4 HOH 83 296 296 HOH HOH B . M 4 HOH 84 297 297 HOH HOH B . M 4 HOH 85 298 298 HOH HOH B . M 4 HOH 86 299 299 HOH HOH B . M 4 HOH 87 300 300 HOH HOH B . M 4 HOH 88 301 301 HOH HOH B . M 4 HOH 89 302 302 HOH HOH B . M 4 HOH 90 303 303 HOH HOH B . M 4 HOH 91 304 304 HOH HOH B . M 4 HOH 92 305 305 HOH HOH B . M 4 HOH 93 306 306 HOH HOH B . M 4 HOH 94 307 307 HOH HOH B . M 4 HOH 95 308 308 HOH HOH B . M 4 HOH 96 309 309 HOH HOH B . M 4 HOH 97 310 310 HOH HOH B . M 4 HOH 98 311 311 HOH HOH B . M 4 HOH 99 312 312 HOH HOH B . M 4 HOH 100 313 313 HOH HOH B . M 4 HOH 101 314 314 HOH HOH B . M 4 HOH 102 315 315 HOH HOH B . M 4 HOH 103 316 316 HOH HOH B . M 4 HOH 104 317 317 HOH HOH B . M 4 HOH 105 318 318 HOH HOH B . M 4 HOH 106 319 319 HOH HOH B . M 4 HOH 107 320 320 HOH HOH B . M 4 HOH 108 321 321 HOH HOH B . M 4 HOH 109 322 322 HOH HOH B . M 4 HOH 110 323 323 HOH HOH B . M 4 HOH 111 324 324 HOH HOH B . M 4 HOH 112 325 325 HOH HOH B . M 4 HOH 113 326 326 HOH HOH B . M 4 HOH 114 327 327 HOH HOH B . M 4 HOH 115 328 328 HOH HOH B . M 4 HOH 116 329 329 HOH HOH B . M 4 HOH 117 330 330 HOH HOH B . M 4 HOH 118 331 331 HOH HOH B . M 4 HOH 119 332 332 HOH HOH B . M 4 HOH 120 333 333 HOH HOH B . M 4 HOH 121 334 334 HOH HOH B . M 4 HOH 122 335 335 HOH HOH B . M 4 HOH 123 336 336 HOH HOH B . M 4 HOH 124 337 337 HOH HOH B . M 4 HOH 125 338 338 HOH HOH B . M 4 HOH 126 339 339 HOH HOH B . M 4 HOH 127 340 340 HOH HOH B . M 4 HOH 128 341 341 HOH HOH B . M 4 HOH 129 342 342 HOH HOH B . M 4 HOH 130 343 343 HOH HOH B . M 4 HOH 131 344 344 HOH HOH B . M 4 HOH 132 345 345 HOH HOH B . M 4 HOH 133 346 346 HOH HOH B . M 4 HOH 134 347 347 HOH HOH B . M 4 HOH 135 348 348 HOH HOH B . M 4 HOH 136 349 349 HOH HOH B . M 4 HOH 137 350 350 HOH HOH B . M 4 HOH 138 351 351 HOH HOH B . M 4 HOH 139 352 352 HOH HOH B . M 4 HOH 140 353 353 HOH HOH B . M 4 HOH 141 354 354 HOH HOH B . M 4 HOH 142 355 355 HOH HOH B . M 4 HOH 143 356 356 HOH HOH B . M 4 HOH 144 357 357 HOH HOH B . M 4 HOH 145 358 358 HOH HOH B . M 4 HOH 146 359 359 HOH HOH B . M 4 HOH 147 360 360 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 43 A MSE 43 ? MET SELENOMETHIONINE 2 A MSE 51 A MSE 51 ? MET SELENOMETHIONINE 3 A MSE 107 A MSE 107 ? MET SELENOMETHIONINE 4 A MSE 121 A MSE 121 ? MET SELENOMETHIONINE 5 A MSE 141 A MSE 141 ? MET SELENOMETHIONINE 6 A MSE 191 A MSE 191 ? MET SELENOMETHIONINE 7 B MSE 43 B MSE 43 ? MET SELENOMETHIONINE 8 B MSE 51 B MSE 51 ? MET SELENOMETHIONINE 9 B MSE 107 B MSE 107 ? MET SELENOMETHIONINE 10 B MSE 121 B MSE 121 ? MET SELENOMETHIONINE 11 B MSE 141 B MSE 141 ? MET SELENOMETHIONINE 12 B MSE 191 B MSE 191 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 5240 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(phenix.refine)' ? 1 ADSC 'data collection' Quantum ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SHARP phasing . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 304 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 356 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 124 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -170.84 _pdbx_validate_torsion.psi 132.23 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 B MSE 1 ? B MSE 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYL-L-HOMOCYSTEINE SAH 3 GLYCEROL GOL 4 water HOH #