HEADER TRANSFERASE 13-NOV-07 3BCV TITLE CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSYLTRANSFERASE FROM BACTEROIDES TITLE 2 FRAGILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE GLYCOSYLTRANSFERASE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 2-230; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 272559; SOURCE 4 STRAIN: NCTC 9343; SOURCE 5 ATCC: 25285; SOURCE 6 GENE: BF2801; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS GLYCOSYLTRANSFERASE, PROTEIN STRUCTURE INITIATIVE II, PSI-II, 12059A, KEYWDS 2 NYSGXRC, STRUCTURAL GENOMICS, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.PALANI,D.KUMARAN,S.K.BURLEY,S.SWAMINATHAN,NEW YORK SGX RESEARCH AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 4 03-FEB-21 3BCV 1 AUTHOR JRNL SEQADV LINK REVDAT 3 13-JUL-11 3BCV 1 VERSN REVDAT 2 24-FEB-09 3BCV 1 VERSN REVDAT 1 27-NOV-07 3BCV 0 JRNL AUTH K.PALANI,D.KUMARAN,S.K.BURLEY,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSYLTRANSFERASE FROM JRNL TITL 2 BACTEROIDES FRAGILIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 59750.600 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 23202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1119 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.50 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2892 REMARK 3 BIN R VALUE (WORKING SET) : 0.3440 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 150 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.027 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3110 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 104 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.870 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.320 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.070 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.890 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.430 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 34.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES LISTED AS MISSING IN REMARK REMARK 3 465 ARE DUE TO LACK OF ELECTRON DENSITY. RESIDUES WITH MISSING REMARK 3 ATOMS LISTED IN REMARK 470 ARE DUE TO LACK OF ELECTRON DENSITY REMARK 3 FOR SIDE CHAINS AND MODELED AS ALANINES. REMARK 4 REMARK 4 3BCV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045362. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : SI(III) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23202 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 19.60 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE TRIHYDRATE, 0.2M REMARK 280 AMMONIUM SULFATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 76.21700 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 76.21700 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 76.21700 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 76.21700 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 76.21700 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 76.21700 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 76.21700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 76.21700 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 76.21700 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 76.21700 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 76.21700 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 76.21700 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 76.21700 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 76.21700 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 76.21700 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 76.21700 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 76.21700 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 76.21700 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 76.21700 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 76.21700 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 76.21700 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 76.21700 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 76.21700 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 76.21700 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 76.21700 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 76.21700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2010 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 GLY A 120 REMARK 465 LEU A 121 REMARK 465 LYS A 122 REMARK 465 ARG A 123 REMARK 465 ILE A 124 REMARK 465 THR A 125 REMARK 465 MSE A 126 REMARK 465 ALA A 127 REMARK 465 GLY A 128 REMARK 465 ILE A 129 REMARK 465 PRO A 130 REMARK 465 THR A 131 REMARK 465 GLY A 132 REMARK 465 THR A 133 REMARK 465 VAL A 134 REMARK 465 THR A 135 REMARK 465 HIS A 136 REMARK 465 GLN A 137 REMARK 465 LYS A 138 REMARK 465 GLU A 139 REMARK 465 GLN A 219 REMARK 465 THR A 220 REMARK 465 PHE A 221 REMARK 465 TYR A 222 REMARK 465 ASN A 223 REMARK 465 TYR A 224 REMARK 465 ARG A 225 REMARK 465 THR A 226 REMARK 465 ASN A 227 REMARK 465 PRO A 228 REMARK 465 ILE A 229 REMARK 465 SER A 230 REMARK 465 ILE A 231 REMARK 465 SER A 232 REMARK 465 GLU A 233 REMARK 465 GLY A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 HIS A 237 REMARK 465 HIS A 238 REMARK 465 HIS A 239 REMARK 465 HIS A 240 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 GLY B 120 REMARK 465 LEU B 121 REMARK 465 LYS B 122 REMARK 465 ARG B 123 REMARK 465 ILE B 124 REMARK 465 THR B 125 REMARK 465 MSE B 126 REMARK 465 ALA B 127 REMARK 465 GLY B 128 REMARK 465 ILE B 129 REMARK 465 PRO B 130 REMARK 465 THR B 131 REMARK 465 GLY B 132 REMARK 465 THR B 133 REMARK 465 VAL B 134 REMARK 465 THR B 135 REMARK 465 HIS B 136 REMARK 465 GLN B 137 REMARK 465 LYS B 138 REMARK 465 GLU B 139 REMARK 465 GLN B 219 REMARK 465 THR B 220 REMARK 465 PHE B 221 REMARK 465 TYR B 222 REMARK 465 ASN B 223 REMARK 465 TYR B 224 REMARK 465 ARG B 225 REMARK 465 THR B 226 REMARK 465 ASN B 227 REMARK 465 PRO B 228 REMARK 465 ILE B 229 REMARK 465 SER B 230 REMARK 465 ILE B 231 REMARK 465 SER B 232 REMARK 465 GLU B 233 REMARK 465 GLY B 234 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 465 HIS B 237 REMARK 465 HIS B 238 REMARK 465 HIS B 239 REMARK 465 HIS B 240 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN B 212 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 16 27.53 -145.52 REMARK 500 ASP A 46 -143.77 -89.31 REMARK 500 ALA A 70 3.92 -150.72 REMARK 500 ASP A 94 30.06 -80.06 REMARK 500 ASP B 34 77.55 -106.86 REMARK 500 ASP B 46 -149.12 -82.95 REMARK 500 ALA B 70 1.37 -150.78 REMARK 500 ILE B 213 110.20 54.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-12059A RELATED DB: TARGETDB DBREF 3BCV A 4 232 UNP Q5LBM4 Q5LBM4_BACFN 2 230 DBREF 3BCV B 4 232 UNP Q5LBM4 Q5LBM4_BACFN 2 230 SEQADV 3BCV MSE A 1 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV SER A 2 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV LEU A 3 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV GLU A 233 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV GLY A 234 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS A 235 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS A 236 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS A 237 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS A 238 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS A 239 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS A 240 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV MSE B 1 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV SER B 2 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV LEU B 3 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV GLU B 233 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV GLY B 234 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS B 235 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS B 236 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS B 237 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS B 238 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS B 239 UNP Q5LBM4 EXPRESSION TAG SEQADV 3BCV HIS B 240 UNP Q5LBM4 EXPRESSION TAG SEQRES 1 A 240 MSE SER LEU ILE PRO LYS VAL SER VAL ILE VAL PRO ILE SEQRES 2 A 240 TYR ASN VAL GLU LYS TYR LEU ASP GLN CYS VAL GLN ALA SEQRES 3 A 240 LEU LEU ALA GLN THR LEU SER ASP ILE GLU ILE ILE LEU SEQRES 4 A 240 ILE ASP ASP GLU SER PRO ASP ASN CYS PRO LYS ILE CYS SEQRES 5 A 240 ASP ASP TYR ALA ALA GLN TYR PRO ASN ILE LYS VAL ILE SEQRES 6 A 240 HIS LYS LYS ASN ALA GLY LEU GLY MSE ALA CYS ASN SER SEQRES 7 A 240 GLY LEU ASP VAL ALA THR GLY GLU TYR VAL ALA PHE CYS SEQRES 8 A 240 ASP SER ASP ASP TYR VAL ASP SER ASP MSE TYR MSE THR SEQRES 9 A 240 MSE TYR ASN VAL ALA GLN LYS TYR THR CYS ASP ALA VAL SEQRES 10 A 240 PHE THR GLY LEU LYS ARG ILE THR MSE ALA GLY ILE PRO SEQRES 11 A 240 THR GLY THR VAL THR HIS GLN LYS GLU PHE LYS LEU TYR SEQRES 12 A 240 LYS ASN LYS ASN GLU ILE HIS THR LEU LEU LYS ASP LEU SEQRES 13 A 240 ILE ALA SER ASP PRO TYR ALA ARG GLU GLU ARG ALA ILE SEQRES 14 A 240 GLN VAL SER ALA LYS VAL VAL LEU TYR ARG ARG ASN LEU SEQRES 15 A 240 ILE GLU LYS LYS HIS LEU ARG PHE VAL SER GLU ARG ILE SEQRES 16 A 240 LEU PRO SER GLU ASP LEU ILE PHE ASN VAL ASP VAL LEU SEQRES 17 A 240 ALA ASN SER ASN ILE VAL CYS VAL LEU PRO GLN THR PHE SEQRES 18 A 240 TYR ASN TYR ARG THR ASN PRO ILE SER ILE SER GLU GLY SEQRES 19 A 240 HIS HIS HIS HIS HIS HIS SEQRES 1 B 240 MSE SER LEU ILE PRO LYS VAL SER VAL ILE VAL PRO ILE SEQRES 2 B 240 TYR ASN VAL GLU LYS TYR LEU ASP GLN CYS VAL GLN ALA SEQRES 3 B 240 LEU LEU ALA GLN THR LEU SER ASP ILE GLU ILE ILE LEU SEQRES 4 B 240 ILE ASP ASP GLU SER PRO ASP ASN CYS PRO LYS ILE CYS SEQRES 5 B 240 ASP ASP TYR ALA ALA GLN TYR PRO ASN ILE LYS VAL ILE SEQRES 6 B 240 HIS LYS LYS ASN ALA GLY LEU GLY MSE ALA CYS ASN SER SEQRES 7 B 240 GLY LEU ASP VAL ALA THR GLY GLU TYR VAL ALA PHE CYS SEQRES 8 B 240 ASP SER ASP ASP TYR VAL ASP SER ASP MSE TYR MSE THR SEQRES 9 B 240 MSE TYR ASN VAL ALA GLN LYS TYR THR CYS ASP ALA VAL SEQRES 10 B 240 PHE THR GLY LEU LYS ARG ILE THR MSE ALA GLY ILE PRO SEQRES 11 B 240 THR GLY THR VAL THR HIS GLN LYS GLU PHE LYS LEU TYR SEQRES 12 B 240 LYS ASN LYS ASN GLU ILE HIS THR LEU LEU LYS ASP LEU SEQRES 13 B 240 ILE ALA SER ASP PRO TYR ALA ARG GLU GLU ARG ALA ILE SEQRES 14 B 240 GLN VAL SER ALA LYS VAL VAL LEU TYR ARG ARG ASN LEU SEQRES 15 B 240 ILE GLU LYS LYS HIS LEU ARG PHE VAL SER GLU ARG ILE SEQRES 16 B 240 LEU PRO SER GLU ASP LEU ILE PHE ASN VAL ASP VAL LEU SEQRES 17 B 240 ALA ASN SER ASN ILE VAL CYS VAL LEU PRO GLN THR PHE SEQRES 18 B 240 TYR ASN TYR ARG THR ASN PRO ILE SER ILE SER GLU GLY SEQRES 19 B 240 HIS HIS HIS HIS HIS HIS MODRES 3BCV MSE A 74 MET SELENOMETHIONINE MODRES 3BCV MSE A 101 MET SELENOMETHIONINE MODRES 3BCV MSE A 103 MET SELENOMETHIONINE MODRES 3BCV MSE A 105 MET SELENOMETHIONINE MODRES 3BCV MSE B 74 MET SELENOMETHIONINE MODRES 3BCV MSE B 101 MET SELENOMETHIONINE MODRES 3BCV MSE B 103 MET SELENOMETHIONINE MODRES 3BCV MSE B 105 MET SELENOMETHIONINE HET MSE A 74 8 HET MSE A 101 8 HET MSE A 103 8 HET MSE A 105 8 HET MSE B 74 8 HET MSE B 101 8 HET MSE B 103 8 HET MSE B 105 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *104(H2 O) HELIX 1 1 TYR A 19 ALA A 29 1 11 HELIX 2 2 ASN A 47 TYR A 59 1 13 HELIX 3 3 GLY A 71 ALA A 83 1 13 HELIX 4 4 ASP A 100 THR A 113 1 14 HELIX 5 5 ASN A 145 LYS A 154 1 10 HELIX 6 6 ASP A 155 ILE A 157 5 3 HELIX 7 7 ASP A 160 SER A 172 1 13 HELIX 8 8 ARG A 180 LYS A 186 1 7 HELIX 9 9 SER A 198 ALA A 209 1 12 HELIX 10 10 VAL B 16 ALA B 29 1 14 HELIX 11 11 ASN B 47 TYR B 59 1 13 HELIX 12 12 GLY B 71 ALA B 83 1 13 HELIX 13 13 ASP B 100 THR B 113 1 14 HELIX 14 14 ASN B 145 LYS B 154 1 10 HELIX 15 15 ASP B 155 ILE B 157 5 3 HELIX 16 16 ASP B 160 SER B 172 1 13 HELIX 17 17 ARG B 180 LYS B 186 1 7 HELIX 18 18 SER B 198 ASN B 210 1 13 SHEET 1 A 8 ILE A 62 HIS A 66 0 SHEET 2 A 8 ILE A 35 ASP A 41 1 N LEU A 39 O LYS A 63 SHEET 3 A 8 VAL A 7 ILE A 13 1 N VAL A 9 O GLU A 36 SHEET 4 A 8 TYR A 87 PHE A 90 1 O ALA A 89 N ILE A 10 SHEET 5 A 8 VAL A 176 ARG A 179 -1 O TYR A 178 N VAL A 88 SHEET 6 A 8 ALA A 116 PHE A 118 -1 N VAL A 117 O LEU A 177 SHEET 7 A 8 VAL A 214 VAL A 216 1 O CYS A 215 N PHE A 118 SHEET 8 A 8 LYS A 141 TYR A 143 -1 N TYR A 143 O VAL A 214 SHEET 1 B 8 ILE B 62 HIS B 66 0 SHEET 2 B 8 ILE B 35 ASP B 41 1 N LEU B 39 O LYS B 63 SHEET 3 B 8 VAL B 7 ILE B 13 1 N VAL B 11 O ILE B 38 SHEET 4 B 8 TYR B 87 PHE B 90 1 O ALA B 89 N ILE B 10 SHEET 5 B 8 VAL B 176 ARG B 179 -1 O TYR B 178 N VAL B 88 SHEET 6 B 8 ALA B 116 PHE B 118 -1 N VAL B 117 O LEU B 177 SHEET 7 B 8 VAL B 214 VAL B 216 1 O CYS B 215 N PHE B 118 SHEET 8 B 8 LYS B 141 TYR B 143 -1 N TYR B 143 O VAL B 214 LINK C GLY A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N ALA A 75 1555 1555 1.33 LINK C ASP A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N TYR A 102 1555 1555 1.33 LINK C TYR A 102 N MSE A 103 1555 1555 1.32 LINK C MSE A 103 N THR A 104 1555 1555 1.33 LINK C THR A 104 N MSE A 105 1555 1555 1.33 LINK C MSE A 105 N TYR A 106 1555 1555 1.32 LINK C GLY B 73 N MSE B 74 1555 1555 1.33 LINK C MSE B 74 N ALA B 75 1555 1555 1.33 LINK C ASP B 100 N MSE B 101 1555 1555 1.32 LINK C MSE B 101 N TYR B 102 1555 1555 1.33 LINK C TYR B 102 N MSE B 103 1555 1555 1.33 LINK C MSE B 103 N THR B 104 1555 1555 1.33 LINK C THR B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N TYR B 106 1555 1555 1.33 CRYST1 152.434 152.434 152.434 90.00 90.00 90.00 I 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006560 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006560 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006560 0.00000