data_3BIR # _entry.id 3BIR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BIR pdb_00003bir 10.2210/pdb3bir/pdb WWPDB D_1000178888 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BIR _pdbx_database_status.recvd_initial_deposition_date 1997-06-27 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Doumen, J.' 1 'Steyaert, J.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Dissecting histidine interactions of ribonuclease T1 with asparagine and glutamine replacements: analysis of double mutant cycles at one position. ; J.Mol.Biol. 275 651 661 1998 JMOBAK UK 0022-2836 0070 ? 9466938 10.1006/jmbi.1997.1480 1 'His92Ala Mutation in Ribonuclease T1 Induces Segmental Flexibility. An X-Ray Study' J.Mol.Biol. 224 701 ? 1992 JMOBAK UK 0022-2836 0070 ? ? ? 2 ;Three-Dimensional Structure of the Ribonuclease T1 2'-Gmp Complex at 1.9-A Resolution ; J.Biol.Chem. 263 15358 ? 1988 JBCHA3 US 0021-9258 0071 ? ? ? 3 ;Specific Protein-Nucleic Acid Recognition in Ribonuclease T1-2'-Guanylic Acid Complex. An X-Ray Study ; Nature 299 27 ? 1982 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'De Vos, S.' 1 ? primary 'Doumen, J.' 2 ? primary 'Langhorst, U.' 3 ? primary 'Steyaert, J.' 4 ? 1 'Koellner, G.' 5 ? 1 'Choe, H.W.' 6 ? 1 'Heinemann, U.' 7 ? 1 'Grunert, H.P.' 8 ? 1 'Zouni, A.' 9 ? 1 'Hahn, U.' 10 ? 1 'Saenger, W.' 11 ? 2 'Arni, R.' 12 ? 2 'Heinemann, U.' 13 ? 2 'Tokuoka, R.' 14 ? 2 'Saenger, W.' 15 ? 3 'Heinemann, U.' 16 ? 3 'Saenger, W.' 17 ? # _cell.entry_id 3BIR _cell.length_a 40.160 _cell.length_b 46.880 _cell.length_c 50.070 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BIR _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RIBONUCLEASE T1' 11070.650 1 3.1.27.3 H92N ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn "GUANOSINE-2'-MONOPHOSPHATE" 363.221 1 ? ? ? ? 4 water nat water 18.015 128 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNASE T1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ACDYTCGSNCYSSSDVSTAQAAGYKLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVF NENNQLAGVITNTGASGNNFVECT ; _entity_poly.pdbx_seq_one_letter_code_can ;ACDYTCGSNCYSSSDVSTAQAAGYKLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVF NENNQLAGVITNTGASGNNFVECT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 CYS n 1 3 ASP n 1 4 TYR n 1 5 THR n 1 6 CYS n 1 7 GLY n 1 8 SER n 1 9 ASN n 1 10 CYS n 1 11 TYR n 1 12 SER n 1 13 SER n 1 14 SER n 1 15 ASP n 1 16 VAL n 1 17 SER n 1 18 THR n 1 19 ALA n 1 20 GLN n 1 21 ALA n 1 22 ALA n 1 23 GLY n 1 24 TYR n 1 25 LYS n 1 26 LEU n 1 27 HIS n 1 28 GLU n 1 29 ASP n 1 30 GLY n 1 31 GLU n 1 32 THR n 1 33 VAL n 1 34 GLY n 1 35 SER n 1 36 ASN n 1 37 SER n 1 38 TYR n 1 39 PRO n 1 40 HIS n 1 41 LYS n 1 42 TYR n 1 43 ASN n 1 44 ASN n 1 45 TYR n 1 46 GLU n 1 47 GLY n 1 48 PHE n 1 49 ASP n 1 50 PHE n 1 51 SER n 1 52 VAL n 1 53 SER n 1 54 SER n 1 55 PRO n 1 56 TYR n 1 57 TYR n 1 58 GLU n 1 59 TRP n 1 60 PRO n 1 61 ILE n 1 62 LEU n 1 63 SER n 1 64 SER n 1 65 GLY n 1 66 ASP n 1 67 VAL n 1 68 TYR n 1 69 SER n 1 70 GLY n 1 71 GLY n 1 72 SER n 1 73 PRO n 1 74 GLY n 1 75 ALA n 1 76 ASP n 1 77 ARG n 1 78 VAL n 1 79 VAL n 1 80 PHE n 1 81 ASN n 1 82 GLU n 1 83 ASN n 1 84 ASN n 1 85 GLN n 1 86 LEU n 1 87 ALA n 1 88 GLY n 1 89 VAL n 1 90 ILE n 1 91 THR n 1 92 ASN n 1 93 THR n 1 94 GLY n 1 95 ALA n 1 96 SER n 1 97 GLY n 1 98 ASN n 1 99 ASN n 1 100 PHE n 1 101 VAL n 1 102 GLU n 1 103 CYS n 1 104 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aspergillus _entity_src_gen.pdbx_gene_src_gene 'SYNTHETIC GENE' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aspergillus oryzae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5062 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene 'SYNTHETIC GENE' _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PMC5-RT1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNT1_ASPOR _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00651 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MMYSKLLTLTTLLLPTALALPSLVERACDYTCGSNCYSSSDVSTAQAAGYQLHEDGETVGSNSYPHKYNNYEGFDFSVSS PYYEWPILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BIR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 104 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00651 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 130 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BIR LYS A 25 ? UNP P00651 GLN 51 conflict 25 1 1 3BIR ASN A 92 ? UNP P00651 HIS 118 'engineered mutation' 92 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2GP non-polymer . "GUANOSINE-2'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3BIR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.20 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, NAOAC PH 4.2, 20 MG/ML PROTEIN, 45 % MPD 2.5 MM CACL2, 20 MM GPS' # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1995-11-06 _diffrn_detector.details 'DUAL SLITS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3BIR _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 10.0 _reflns.d_resolution_high 2.3 _reflns.number_obs 4313 _reflns.number_all ? _reflns.percent_possible_obs 94. _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.107 _reflns.pdbx_netI_over_sigmaI 5.5 _reflns.B_iso_Wilson_estimate 14.2 _reflns.pdbx_redundancy 5.0 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 50. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.239 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3BIR _refine.ls_number_reflns_obs 8600 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.00100 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 94. _refine.ls_R_factor_obs 0.192 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.192 _refine.ls_R_factor_R_free 0.237 _refine.ls_R_factor_R_free_error 0.018 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 475 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 15.3 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1BIR' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3BIR _refine_analyze.Luzzati_coordinate_error_obs 0.58 _refine_analyze.Luzzati_sigma_a_obs 0.36 _refine_analyze.Luzzati_d_res_low_obs 8.00 _refine_analyze.Luzzati_coordinate_error_free 0.56 _refine_analyze.Luzzati_sigma_a_free 0.31 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 789 _refine_hist.pdbx_number_atoms_nucleic_acid 29 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 384 _refine_hist.number_atoms_total 1202 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.028 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.5 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.2 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 2.82 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.42 1.70 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.11 2.30 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.72 2.30 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.71 2.80 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19.SOL 'X-RAY DIFFRACTION' 3 NUCL.PARAM NUCL.TOPOL 'X-RAY DIFFRACTION' # _struct.entry_id 3BIR _struct.title 'DISECTING HISTIDINE INTERACTIONS IN RIBONUCLEASE T1 BY ASN AND GLN SUBSTITUTIONS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BIR _struct_keywords.pdbx_keywords ENDONUCLEASE _struct_keywords.text 'ENDONUCLEASE, HYDROLASE, RIBONUCLEASE T1, MUTATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 13 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASP _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 29 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 13 _struct_conf.end_auth_comp_id ASP _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 29 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 10 SG ? ? A CYS 2 A CYS 10 1_555 ? ? ? ? ? ? ? 2.315 ? ? disulf2 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 103 SG ? ? A CYS 6 A CYS 103 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc1 metalc ? ? A ASP 15 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 15 A CA 106 1_555 ? ? ? ? ? ? ? 2.629 ? ? metalc2 metalc ? ? A ASP 15 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 15 A CA 106 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc3 metalc ? ? A ASP 49 OD2 2 ? ? 3_655 C CA . CA ? ? A ASP 49 A CA 107 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc4 metalc ? ? A ASN 98 OD1 ? ? ? 1_555 C CA . CA ? ? A ASN 98 A CA 107 1_555 ? ? ? ? ? ? ? 2.344 ? ? metalc5 metalc ? ? A ASN 98 ND2 ? ? ? 1_555 C CA . CA ? ? A ASN 98 A CA 107 1_555 ? ? ? ? ? ? ? 3.395 ? ? metalc6 metalc ? ? D 2GP . O3P ? ? ? 1_555 C CA . CA ? ? A 2GP 105 A CA 107 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 106 A HOH 206 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc8 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 106 A HOH 212 1_555 ? ? ? ? ? ? ? 2.577 ? ? metalc9 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 106 A HOH 214 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc10 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 106 A HOH 219 1_555 ? ? ? ? ? ? ? 2.457 ? ? metalc11 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 106 A HOH 238 1_555 ? ? ? ? ? ? ? 2.763 ? ? metalc12 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 106 A HOH 241 1_555 ? ? ? ? ? ? ? 2.549 ? ? metalc13 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 107 A HOH 217 1_555 ? ? ? ? ? ? ? 2.586 ? ? metalc14 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 107 A HOH 221 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc15 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 107 A HOH 260 1_555 ? ? ? ? ? ? ? 2.639 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 38 A . ? TYR 38 A PRO 39 A ? PRO 39 A 1 0.13 2 SER 54 A . ? SER 54 A PRO 55 A ? PRO 55 A 1 -0.95 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 4 ? CYS A 6 ? TYR A 4 CYS A 6 A 2 ASN A 9 ? TYR A 11 ? ASN A 9 TYR A 11 B 1 HIS A 40 ? TYR A 42 ? HIS A 40 TYR A 42 B 2 TYR A 56 ? PRO A 60 ? TYR A 56 PRO A 60 B 3 ASP A 76 ? ASN A 81 ? ASP A 76 ASN A 81 B 4 LEU A 86 ? THR A 91 ? LEU A 86 THR A 91 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 4 ? O TYR A 4 N TYR A 11 ? N TYR A 11 B 1 2 O HIS A 40 ? O HIS A 40 N GLU A 58 ? N GLU A 58 B 2 3 O TYR A 57 ? O TYR A 57 N PHE A 80 ? N PHE A 80 B 3 4 O ARG A 77 ? O ARG A 77 N ILE A 90 ? N ILE A 90 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details CAT Unknown ? ? ? ? 5 'CATALYTIC SITE.' AC1 Software A CA 106 ? 7 'BINDING SITE FOR RESIDUE CA A 106' AC2 Software A CA 107 ? 6 'BINDING SITE FOR RESIDUE CA A 107' AC3 Software A 2GP 105 ? 15 'BINDING SITE FOR RESIDUE 2GP A 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CAT 5 ASN A 92 ? ASN A 92 . ? 1_555 ? 2 CAT 5 GLU A 58 ? GLU A 58 . ? 1_555 ? 3 CAT 5 HIS A 40 ? HIS A 40 . ? 1_555 ? 4 CAT 5 TYR A 38 ? TYR A 38 . ? 1_555 ? 5 CAT 5 PHE A 100 ? PHE A 100 . ? 1_555 ? 6 AC1 7 ASP A 15 ? ASP A 15 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH A 206 . ? 1_555 ? 8 AC1 7 HOH E . ? HOH A 212 . ? 1_555 ? 9 AC1 7 HOH E . ? HOH A 214 . ? 1_555 ? 10 AC1 7 HOH E . ? HOH A 219 . ? 1_555 ? 11 AC1 7 HOH E . ? HOH A 238 . ? 1_555 ? 12 AC1 7 HOH E . ? HOH A 241 . ? 1_555 ? 13 AC2 6 ASP A 49 ? ASP A 49 . ? 3_655 ? 14 AC2 6 ASN A 98 ? ASN A 98 . ? 1_555 ? 15 AC2 6 2GP D . ? 2GP A 105 . ? 1_555 ? 16 AC2 6 HOH E . ? HOH A 217 . ? 1_555 ? 17 AC2 6 HOH E . ? HOH A 221 . ? 1_555 ? 18 AC2 6 HOH E . ? HOH A 260 . ? 1_555 ? 19 AC3 15 ASN A 36 ? ASN A 36 . ? 1_555 ? 20 AC3 15 TYR A 38 ? TYR A 38 . ? 1_555 ? 21 AC3 15 HIS A 40 ? HIS A 40 . ? 1_555 ? 22 AC3 15 LYS A 41 ? LYS A 41 . ? 1_555 ? 23 AC3 15 TYR A 42 ? TYR A 42 . ? 1_555 ? 24 AC3 15 ASN A 43 ? ASN A 43 . ? 1_555 ? 25 AC3 15 ASN A 44 ? ASN A 44 . ? 1_555 ? 26 AC3 15 TYR A 45 ? TYR A 45 . ? 1_555 ? 27 AC3 15 GLU A 46 ? GLU A 46 . ? 1_555 ? 28 AC3 15 GLU A 58 ? GLU A 58 . ? 1_555 ? 29 AC3 15 ASN A 98 ? ASN A 98 . ? 1_555 ? 30 AC3 15 PHE A 100 ? PHE A 100 . ? 1_555 ? 31 AC3 15 CA C . ? CA A 107 . ? 1_555 ? 32 AC3 15 HOH E . ? HOH A 217 . ? 1_555 ? 33 AC3 15 HOH E . ? HOH A 260 . ? 1_555 ? # _database_PDB_matrix.entry_id 3BIR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3BIR _atom_sites.fract_transf_matrix[1][1] 0.024900 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021331 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019972 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 TRP 59 59 59 TRP TRP A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 CYS 103 103 103 CYS CYS A . n A 1 104 THR 104 104 104 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 106 106 CA CA A . C 2 CA 1 107 107 CA CA A . D 3 2GP 1 105 105 2GP 2GP A . E 4 HOH 1 201 201 HOH HOH A . E 4 HOH 2 202 202 HOH HOH A . E 4 HOH 3 203 203 HOH HOH A . E 4 HOH 4 204 204 HOH HOH A . E 4 HOH 5 205 205 HOH HOH A . E 4 HOH 6 206 206 HOH HOH A . E 4 HOH 7 207 207 HOH HOH A . E 4 HOH 8 208 208 HOH HOH A . E 4 HOH 9 209 209 HOH HOH A . E 4 HOH 10 210 210 HOH HOH A . E 4 HOH 11 211 211 HOH HOH A . E 4 HOH 12 212 212 HOH HOH A . E 4 HOH 13 213 213 HOH HOH A . E 4 HOH 14 214 214 HOH HOH A . E 4 HOH 15 215 215 HOH HOH A . E 4 HOH 16 216 216 HOH HOH A . E 4 HOH 17 217 217 HOH HOH A . E 4 HOH 18 218 218 HOH HOH A . E 4 HOH 19 219 219 HOH HOH A . E 4 HOH 20 220 220 HOH HOH A . E 4 HOH 21 221 221 HOH HOH A . E 4 HOH 22 222 222 HOH HOH A . E 4 HOH 23 223 223 HOH HOH A . E 4 HOH 24 224 224 HOH HOH A . E 4 HOH 25 225 225 HOH HOH A . E 4 HOH 26 226 226 HOH HOH A . E 4 HOH 27 227 227 HOH HOH A . E 4 HOH 28 228 228 HOH HOH A . E 4 HOH 29 229 229 HOH HOH A . E 4 HOH 30 230 230 HOH HOH A . E 4 HOH 31 231 231 HOH HOH A . E 4 HOH 32 232 232 HOH HOH A . E 4 HOH 33 233 233 HOH HOH A . E 4 HOH 34 234 234 HOH HOH A . E 4 HOH 35 235 235 HOH HOH A . E 4 HOH 36 236 236 HOH HOH A . E 4 HOH 37 237 237 HOH HOH A . E 4 HOH 38 238 238 HOH HOH A . E 4 HOH 39 239 239 HOH HOH A . E 4 HOH 40 240 240 HOH HOH A . E 4 HOH 41 241 241 HOH HOH A . E 4 HOH 42 242 242 HOH HOH A . E 4 HOH 43 243 243 HOH HOH A . E 4 HOH 44 244 244 HOH HOH A . E 4 HOH 45 245 245 HOH HOH A . E 4 HOH 46 246 246 HOH HOH A . E 4 HOH 47 247 247 HOH HOH A . E 4 HOH 48 248 248 HOH HOH A . E 4 HOH 49 249 249 HOH HOH A . E 4 HOH 50 250 250 HOH HOH A . E 4 HOH 51 251 251 HOH HOH A . E 4 HOH 52 252 252 HOH HOH A . E 4 HOH 53 253 253 HOH HOH A . E 4 HOH 54 254 254 HOH HOH A . E 4 HOH 55 255 255 HOH HOH A . E 4 HOH 56 256 256 HOH HOH A . E 4 HOH 57 257 257 HOH HOH A . E 4 HOH 58 258 258 HOH HOH A . E 4 HOH 59 259 259 HOH HOH A . E 4 HOH 60 260 260 HOH HOH A . E 4 HOH 61 261 261 HOH HOH A . E 4 HOH 62 262 262 HOH HOH A . E 4 HOH 63 263 263 HOH HOH A . E 4 HOH 64 264 264 HOH HOH A . E 4 HOH 65 265 265 HOH HOH A . E 4 HOH 66 266 266 HOH HOH A . E 4 HOH 67 267 267 HOH HOH A . E 4 HOH 68 268 268 HOH HOH A . E 4 HOH 69 269 269 HOH HOH A . E 4 HOH 70 270 270 HOH HOH A . E 4 HOH 71 271 271 HOH HOH A . E 4 HOH 72 272 272 HOH HOH A . E 4 HOH 73 273 273 HOH HOH A . E 4 HOH 74 274 274 HOH HOH A . E 4 HOH 75 275 275 HOH HOH A . E 4 HOH 76 276 276 HOH HOH A . E 4 HOH 77 277 277 HOH HOH A . E 4 HOH 78 278 278 HOH HOH A . E 4 HOH 79 279 279 HOH HOH A . E 4 HOH 80 280 280 HOH HOH A . E 4 HOH 81 281 281 HOH HOH A . E 4 HOH 82 282 282 HOH HOH A . E 4 HOH 83 283 283 HOH HOH A . E 4 HOH 84 284 284 HOH HOH A . E 4 HOH 85 285 285 HOH HOH A . E 4 HOH 86 286 286 HOH HOH A . E 4 HOH 87 287 287 HOH HOH A . E 4 HOH 88 288 288 HOH HOH A . E 4 HOH 89 289 289 HOH HOH A . E 4 HOH 90 290 290 HOH HOH A . E 4 HOH 91 291 291 HOH HOH A . E 4 HOH 92 292 292 HOH HOH A . E 4 HOH 93 293 293 HOH HOH A . E 4 HOH 94 294 294 HOH HOH A . E 4 HOH 95 295 295 HOH HOH A . E 4 HOH 96 296 296 HOH HOH A . E 4 HOH 97 297 297 HOH HOH A . E 4 HOH 98 298 298 HOH HOH A . E 4 HOH 99 299 299 HOH HOH A . E 4 HOH 100 300 300 HOH HOH A . E 4 HOH 101 301 301 HOH HOH A . E 4 HOH 102 302 302 HOH HOH A . E 4 HOH 103 303 303 HOH HOH A . E 4 HOH 104 304 304 HOH HOH A . E 4 HOH 105 305 305 HOH HOH A . E 4 HOH 106 306 306 HOH HOH A . E 4 HOH 107 307 307 HOH HOH A . E 4 HOH 108 308 308 HOH HOH A . E 4 HOH 109 309 309 HOH HOH A . E 4 HOH 110 310 310 HOH HOH A . E 4 HOH 111 311 311 HOH HOH A . E 4 HOH 112 312 312 HOH HOH A . E 4 HOH 113 313 313 HOH HOH A . E 4 HOH 114 314 314 HOH HOH A . E 4 HOH 115 315 315 HOH HOH A . E 4 HOH 116 316 316 HOH HOH A . E 4 HOH 117 317 317 HOH HOH A . E 4 HOH 118 318 318 HOH HOH A . E 4 HOH 119 319 319 HOH HOH A . E 4 HOH 120 320 320 HOH HOH A . E 4 HOH 121 321 321 HOH HOH A . E 4 HOH 122 322 322 HOH HOH A . E 4 HOH 123 323 323 HOH HOH A . E 4 HOH 124 324 324 HOH HOH A . E 4 HOH 125 325 325 HOH HOH A . E 4 HOH 126 326 326 HOH HOH A . E 4 HOH 127 327 327 HOH HOH A . E 4 HOH 128 328 328 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 51.0 ? 2 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 206 ? 1_555 129.8 ? 3 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 206 ? 1_555 79.4 ? 4 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 212 ? 1_555 79.9 ? 5 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 212 ? 1_555 83.2 ? 6 O ? E HOH . ? A HOH 206 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 212 ? 1_555 88.4 ? 7 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 214 ? 1_555 80.4 ? 8 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 214 ? 1_555 76.9 ? 9 O ? E HOH . ? A HOH 206 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 214 ? 1_555 96.8 ? 10 O ? E HOH . ? A HOH 212 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 214 ? 1_555 158.0 ? 11 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 219 ? 1_555 74.8 ? 12 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 219 ? 1_555 125.4 ? 13 O ? E HOH . ? A HOH 206 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 219 ? 1_555 155.2 ? 14 O ? E HOH . ? A HOH 212 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 219 ? 1_555 94.1 ? 15 O ? E HOH . ? A HOH 214 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 219 ? 1_555 90.1 ? 16 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 238 ? 1_555 130.2 ? 17 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 238 ? 1_555 138.3 ? 18 O ? E HOH . ? A HOH 206 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 238 ? 1_555 80.4 ? 19 O ? E HOH . ? A HOH 212 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 238 ? 1_555 60.2 ? 20 O ? E HOH . ? A HOH 214 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 238 ? 1_555 141.7 ? 21 O ? E HOH . ? A HOH 219 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 238 ? 1_555 79.5 ? 22 OD1 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 241 ? 1_555 141.9 ? 23 OD2 ? A ASP 15 ? A ASP 15 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 241 ? 1_555 145.2 ? 24 O ? E HOH . ? A HOH 206 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 241 ? 1_555 82.8 ? 25 O ? E HOH . ? A HOH 212 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 241 ? 1_555 126.1 ? 26 O ? E HOH . ? A HOH 214 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 241 ? 1_555 75.9 ? 27 O ? E HOH . ? A HOH 219 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 241 ? 1_555 75.8 ? 28 O ? E HOH . ? A HOH 238 ? 1_555 CA ? B CA . ? A CA 106 ? 1_555 O ? E HOH . ? A HOH 241 ? 1_555 65.9 ? 29 OD2 2 A ASP 49 ? A ASP 49 ? 3_655 CA ? C CA . ? A CA 107 ? 1_555 OD1 ? A ASN 98 ? A ASN 98 ? 1_555 87.0 ? 30 OD2 2 A ASP 49 ? A ASP 49 ? 3_655 CA ? C CA . ? A CA 107 ? 1_555 ND2 ? A ASN 98 ? A ASN 98 ? 1_555 128.8 ? 31 OD1 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 ND2 ? A ASN 98 ? A ASN 98 ? 1_555 41.8 ? 32 OD2 2 A ASP 49 ? A ASP 49 ? 3_655 CA ? C CA . ? A CA 107 ? 1_555 O3P ? D 2GP . ? A 2GP 105 ? 1_555 163.4 ? 33 OD1 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O3P ? D 2GP . ? A 2GP 105 ? 1_555 104.0 ? 34 ND2 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O3P ? D 2GP . ? A 2GP 105 ? 1_555 63.0 ? 35 OD2 2 A ASP 49 ? A ASP 49 ? 3_655 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 217 ? 1_555 115.1 ? 36 OD1 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 217 ? 1_555 93.3 ? 37 ND2 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 217 ? 1_555 77.0 ? 38 O3P ? D 2GP . ? A 2GP 105 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 217 ? 1_555 77.2 ? 39 OD2 2 A ASP 49 ? A ASP 49 ? 3_655 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 78.9 ? 40 OD1 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 163.0 ? 41 ND2 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 151.3 ? 42 O3P ? D 2GP . ? A 2GP 105 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 91.9 ? 43 O ? E HOH . ? A HOH 217 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 84.4 ? 44 OD2 2 A ASP 49 ? A ASP 49 ? 3_655 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 260 ? 1_555 91.1 ? 45 OD1 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 260 ? 1_555 94.0 ? 46 ND2 ? A ASN 98 ? A ASN 98 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 260 ? 1_555 91.5 ? 47 O3P ? D 2GP . ? A 2GP 105 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 260 ? 1_555 76.0 ? 48 O ? E HOH . ? A HOH 217 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 260 ? 1_555 153.1 ? 49 O ? E HOH . ? A HOH 221 ? 1_555 CA ? C CA . ? A CA 107 ? 1_555 O ? E HOH . ? A HOH 260 ? 1_555 95.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-12-31 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-03 5 'Structure model' 1 4 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 21 4 'Structure model' '_pdbx_struct_conn_angle.value' 22 4 'Structure model' '_struct_conn.pdbx_dist_value' 23 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 24 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 4 'Structure model' '_struct_conn.ptnr1_symmetry' 32 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_symmetry' 39 4 'Structure model' '_struct_ref_seq_dif.details' 40 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 ROTAVATA 'data reduction' . ? 2 AMoRE phasing . ? 3 X-PLOR refinement 3.843 ? 4 CCP4 'data scaling' '(ROTAVATA)' ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 220 ? ? O A HOH 304 ? ? 0.85 2 1 O A HOH 316 ? ? O A HOH 320 ? ? 1.70 3 1 O A HOH 248 ? ? O A HOH 299 ? ? 1.73 4 1 O A HOH 245 ? ? O A HOH 312 ? ? 2.02 5 1 O A HOH 256 ? ? O A HOH 263 ? ? 2.06 6 1 O A HOH 259 ? ? O A HOH 317 ? ? 2.06 7 1 O A HOH 227 ? ? O A HOH 306 ? ? 2.16 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 222 ? ? 1_555 O A HOH 263 ? ? 2_565 1.15 2 1 O A HOH 298 ? ? 1_555 O A HOH 303 ? ? 4_555 1.93 3 1 O A HOH 317 ? ? 1_555 O A HOH 320 ? ? 3_655 1.94 4 1 O A HOH 275 ? ? 1_555 O A HOH 287 ? ? 4_456 1.94 5 1 O A HOH 226 ? ? 1_555 O A HOH 265 ? ? 2_564 2.08 6 1 O A HOH 216 ? ? 1_555 O A HOH 256 ? ? 2_565 2.08 7 1 O A HOH 239 ? ? 1_555 O A HOH 299 ? ? 4_556 2.14 8 1 O A HOH 244 ? ? 1_555 O A HOH 322 ? ? 2_565 2.18 9 1 O A HOH 254 ? ? 1_555 O A HOH 325 ? ? 4_555 2.18 10 1 O A HOH 262 ? ? 1_555 O A HOH 312 ? ? 4_556 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD1 A TYR 4 ? ? CE1 A TYR 4 ? ? 1.481 1.389 0.092 0.015 N 2 1 CD1 A TYR 56 ? ? CE1 A TYR 56 ? ? 1.481 1.389 0.092 0.015 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 81 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -110.95 _pdbx_validate_torsion.psi -168.82 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 11 ? ? 0.064 'SIDE CHAIN' 2 1 TYR A 42 ? ? 0.090 'SIDE CHAIN' 3 1 TYR A 57 ? ? 0.066 'SIDE CHAIN' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 "GUANOSINE-2'-MONOPHOSPHATE" 2GP 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BIR _pdbx_initial_refinement_model.details 'PDB ENTRY 1BIR' #