data_3BQY # _entry.id 3BQY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BQY RCSB RCSB045857 WWPDB D_1000045857 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC6288 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3BQY _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-12-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cuff, M.E.' 1 'Skarina, T.' 2 'Kagan, O.' 3 'Edwards, A.M.' 4 'Savchenko, A.' 5 'Joachimiak, A.' 6 'Midwest Center for Structural Genomics (MCSG)' 7 # _citation.id primary _citation.title 'Structure of a possible TetR family transcriptional regulator from Streptomyces coelicolor A3(2).' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cuff, M.E.' 1 primary 'Skarina, T.' 2 primary 'Kagan, O.' 3 primary 'Edwards, A.M.' 4 primary 'Savchenko, A.' 5 primary 'Joachimiak, A.' 6 # _cell.length_a 83.755 _cell.length_b 83.755 _cell.length_c 83.700 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3BQY _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 3BQY _symmetry.Int_Tables_number 96 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative TetR family transcriptional regulator' 22113.133 1 ? ? 'Residues 16-220' ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 4 water nat water 18.015 181 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GHDRARTVQTALDLLNESGLDTLT(MSE)RRLAQA(MSE)DVQAGALYRYFAAKQDLLTA(MSE)AEH(MSE)VDGVADA AGATGDGDWSERTARLARALRAALLAHRDGARVFAGTHATGPNTLRFADGLVGVLREAGFGDGDAARALYSVANFTVGHT LEEQAALTPGGGGPLDEATLREAVAAGTYPHLAATLPVLTSTDFTAHFEFGLRLLLDGLRAVRGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHDRARTVQTALDLLNESGLDTLTMRRLAQAMDVQAGALYRYFAAKQDLLTAMAEHMVDGVADAAGATGDGDWSERTARL ARALRAALLAHRDGARVFAGTHATGPNTLRFADGLVGVLREAGFGDGDAARALYSVANFTVGHTLEEQAALTPGGGGPLD EATLREAVAAGTYPHLAATLPVLTSTDFTAHFEFGLRLLLDGLRAVRGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC6288 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 ASP n 1 4 ARG n 1 5 ALA n 1 6 ARG n 1 7 THR n 1 8 VAL n 1 9 GLN n 1 10 THR n 1 11 ALA n 1 12 LEU n 1 13 ASP n 1 14 LEU n 1 15 LEU n 1 16 ASN n 1 17 GLU n 1 18 SER n 1 19 GLY n 1 20 LEU n 1 21 ASP n 1 22 THR n 1 23 LEU n 1 24 THR n 1 25 MSE n 1 26 ARG n 1 27 ARG n 1 28 LEU n 1 29 ALA n 1 30 GLN n 1 31 ALA n 1 32 MSE n 1 33 ASP n 1 34 VAL n 1 35 GLN n 1 36 ALA n 1 37 GLY n 1 38 ALA n 1 39 LEU n 1 40 TYR n 1 41 ARG n 1 42 TYR n 1 43 PHE n 1 44 ALA n 1 45 ALA n 1 46 LYS n 1 47 GLN n 1 48 ASP n 1 49 LEU n 1 50 LEU n 1 51 THR n 1 52 ALA n 1 53 MSE n 1 54 ALA n 1 55 GLU n 1 56 HIS n 1 57 MSE n 1 58 VAL n 1 59 ASP n 1 60 GLY n 1 61 VAL n 1 62 ALA n 1 63 ASP n 1 64 ALA n 1 65 ALA n 1 66 GLY n 1 67 ALA n 1 68 THR n 1 69 GLY n 1 70 ASP n 1 71 GLY n 1 72 ASP n 1 73 TRP n 1 74 SER n 1 75 GLU n 1 76 ARG n 1 77 THR n 1 78 ALA n 1 79 ARG n 1 80 LEU n 1 81 ALA n 1 82 ARG n 1 83 ALA n 1 84 LEU n 1 85 ARG n 1 86 ALA n 1 87 ALA n 1 88 LEU n 1 89 LEU n 1 90 ALA n 1 91 HIS n 1 92 ARG n 1 93 ASP n 1 94 GLY n 1 95 ALA n 1 96 ARG n 1 97 VAL n 1 98 PHE n 1 99 ALA n 1 100 GLY n 1 101 THR n 1 102 HIS n 1 103 ALA n 1 104 THR n 1 105 GLY n 1 106 PRO n 1 107 ASN n 1 108 THR n 1 109 LEU n 1 110 ARG n 1 111 PHE n 1 112 ALA n 1 113 ASP n 1 114 GLY n 1 115 LEU n 1 116 VAL n 1 117 GLY n 1 118 VAL n 1 119 LEU n 1 120 ARG n 1 121 GLU n 1 122 ALA n 1 123 GLY n 1 124 PHE n 1 125 GLY n 1 126 ASP n 1 127 GLY n 1 128 ASP n 1 129 ALA n 1 130 ALA n 1 131 ARG n 1 132 ALA n 1 133 LEU n 1 134 TYR n 1 135 SER n 1 136 VAL n 1 137 ALA n 1 138 ASN n 1 139 PHE n 1 140 THR n 1 141 VAL n 1 142 GLY n 1 143 HIS n 1 144 THR n 1 145 LEU n 1 146 GLU n 1 147 GLU n 1 148 GLN n 1 149 ALA n 1 150 ALA n 1 151 LEU n 1 152 THR n 1 153 PRO n 1 154 GLY n 1 155 GLY n 1 156 GLY n 1 157 GLY n 1 158 PRO n 1 159 LEU n 1 160 ASP n 1 161 GLU n 1 162 ALA n 1 163 THR n 1 164 LEU n 1 165 ARG n 1 166 GLU n 1 167 ALA n 1 168 VAL n 1 169 ALA n 1 170 ALA n 1 171 GLY n 1 172 THR n 1 173 TYR n 1 174 PRO n 1 175 HIS n 1 176 LEU n 1 177 ALA n 1 178 ALA n 1 179 THR n 1 180 LEU n 1 181 PRO n 1 182 VAL n 1 183 LEU n 1 184 THR n 1 185 SER n 1 186 THR n 1 187 ASP n 1 188 PHE n 1 189 THR n 1 190 ALA n 1 191 HIS n 1 192 PHE n 1 193 GLU n 1 194 PHE n 1 195 GLY n 1 196 LEU n 1 197 ARG n 1 198 LEU n 1 199 LEU n 1 200 LEU n 1 201 ASP n 1 202 GLY n 1 203 LEU n 1 204 ARG n 1 205 ALA n 1 206 VAL n 1 207 ARG n 1 208 GLY n 1 209 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Streptomyces _entity_src_gen.pdbx_gene_src_gene 'SCO0250, SCJ9A.29' _entity_src_gen.gene_src_species 'Streptomyces coelicolor' _entity_src_gen.gene_src_strain 'A3(2) / M145' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces coelicolor A3(2)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 100226 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc BAA-471 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'modified p11' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9S1P1_STRCO _struct_ref.pdbx_db_accession Q9S1P1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DRARTVQTALDLLNESGLDTLTMRRLAQAMDVQAGALYRYFAAKQDLLTAMAEHMVDGVADAAGATGDGDWSERTARLAR ALRAALLAHRDGARVFAGTHATGPNTLRFADGLVGVLREAGFGDGDAARALYSVANFTVGHTLEEQAALTPGGGGPLDEA TLREAVAAGTYPHLAATLPVLTSTDFTAHFEFGLRLLLDGLRAVR ; _struct_ref.pdbx_align_begin 16 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BQY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 207 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9S1P1 _struct_ref_seq.db_align_beg 16 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 220 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 16 _struct_ref_seq.pdbx_auth_seq_align_end 220 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BQY GLY A 1 ? UNP Q9S1P1 ? ? 'EXPRESSION TAG' 14 1 1 3BQY HIS A 2 ? UNP Q9S1P1 ? ? 'EXPRESSION TAG' 15 2 1 3BQY GLY A 208 ? UNP Q9S1P1 ? ? 'EXPRESSION TAG' 221 3 1 3BQY SER A 209 ? UNP Q9S1P1 ? ? 'EXPRESSION TAG' 222 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3BQY _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.32 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 62.94 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '25% PEG 3350, 0.1M HEPES pH 7.5, 20% Sucrose, VAPOR DIFFUSION, HANGING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date 2006-12-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97932 1.0 2 0.97948 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97932, 0.97948' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM # _reflns.entry_id 3BQY _reflns.d_resolution_high 1.940 _reflns.d_resolution_low 50.000 _reflns.number_obs 24079 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_netI_over_sigmaI 7.900 _reflns.pdbx_chi_squared 2.017 _reflns.pdbx_redundancy 8.100 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 24079 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 27.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.94 _reflns_shell.d_res_low 1.99 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.539 _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.840 _reflns_shell.pdbx_redundancy 8.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1583 _reflns_shell.percent_possible_all 99.70 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BQY _refine.ls_d_res_high 1.950 _refine.ls_d_res_low 34.180 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.770 _refine.ls_number_reflns_obs 22229 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.183 _refine.ls_R_factor_R_work 0.181 _refine.ls_R_factor_R_free 0.210 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1129 _refine.B_iso_mean 31.652 _refine.aniso_B[1][1] 0.540 _refine.aniso_B[2][2] 0.540 _refine.aniso_B[3][3] -1.090 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.pdbx_overall_ESU_R 0.128 _refine.pdbx_overall_ESU_R_Free 0.121 _refine.overall_SU_ML 0.080 _refine.overall_SU_B 5.514 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 22229 _refine.ls_R_factor_all 0.183 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1518 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 181 _refine_hist.number_atoms_total 1713 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 34.180 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1621 0.013 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2210 1.280 1.964 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 220 4.378 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 78 28.441 21.667 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 249 14.844 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23 22.153 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 251 0.090 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1269 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 769 0.207 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1130 0.301 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 149 0.151 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 101 0.218 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 20 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1062 0.936 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1633 1.480 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 612 2.285 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 570 3.362 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.001 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.430 _refine_ls_shell.number_reflns_R_work 1498 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.228 _refine_ls_shell.R_factor_R_free 0.295 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 81 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1579 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BQY _struct.title 'Crystal structure of a possible TetR family transcriptional regulator from Streptomyces coelicolor A3(2).' _struct.pdbx_descriptor 'Putative TetR family transcriptional regulator' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BQY _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR' _struct_keywords.text ;TetR, transcriptional regulator, structural genomics, Streptomyces coelicolor, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, DNA-binding, Transcription regulation, TRANSCRIPTION REGULATOR ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 3 ? GLY A 19 ? ASP A 16 GLY A 32 1 ? 17 HELX_P HELX_P2 2 LEU A 20 ? LEU A 23 ? LEU A 33 LEU A 36 5 ? 4 HELX_P HELX_P3 3 THR A 24 ? ASP A 33 ? THR A 37 ASP A 46 1 ? 10 HELX_P HELX_P4 4 GLN A 35 ? PHE A 43 ? GLN A 48 PHE A 56 1 ? 9 HELX_P HELX_P5 5 ALA A 45 ? VAL A 58 ? ALA A 58 VAL A 71 1 ? 14 HELX_P HELX_P6 6 GLY A 60 ? GLY A 66 ? GLY A 73 GLY A 79 5 ? 7 HELX_P HELX_P7 7 ASP A 72 ? ALA A 90 ? ASP A 85 ALA A 103 1 ? 19 HELX_P HELX_P8 8 ASP A 93 ? GLY A 100 ? ASP A 106 GLY A 113 1 ? 8 HELX_P HELX_P9 9 GLY A 105 ? ALA A 122 ? GLY A 118 ALA A 135 1 ? 18 HELX_P HELX_P10 10 GLY A 125 ? THR A 152 ? GLY A 138 THR A 165 1 ? 28 HELX_P HELX_P11 11 ASP A 160 ? VAL A 168 ? ASP A 173 VAL A 181 1 ? 9 HELX_P HELX_P12 12 TYR A 173 ? THR A 184 ? TYR A 186 THR A 197 1 ? 12 HELX_P HELX_P13 13 ASP A 187 ? ARG A 207 ? ASP A 200 ARG A 220 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A THR 24 C ? ? ? 1_555 A MSE 25 N ? ? A THR 37 A MSE 38 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? A MSE 25 C ? ? ? 1_555 A ARG 26 N ? ? A MSE 38 A ARG 39 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A ALA 31 C ? ? ? 1_555 A MSE 32 N ? ? A ALA 44 A MSE 45 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale ? ? A MSE 32 C ? ? ? 1_555 A ASP 33 N ? ? A MSE 45 A ASP 46 1_555 ? ? ? ? ? ? ? 1.334 ? covale5 covale ? ? A ALA 52 C ? ? ? 1_555 A MSE 53 N ? ? A ALA 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A MSE 53 C ? ? ? 1_555 A ALA 54 N ? ? A MSE 66 A ALA 67 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A HIS 56 C ? ? ? 1_555 A MSE 57 N ? ? A HIS 69 A MSE 70 1_555 ? ? ? ? ? ? ? 1.341 ? covale8 covale ? ? A MSE 57 C ? ? ? 1_555 A VAL 58 N ? ? A MSE 70 A VAL 71 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE PO4 A 302' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE PO4 A 303' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ACY A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 26 ? ARG A 39 . ? 5_545 ? 2 AC1 8 GLY A 37 ? GLY A 50 . ? 5_545 ? 3 AC1 8 TRP A 73 ? TRP A 86 . ? 1_555 ? 4 AC1 8 GLY A 171 ? GLY A 184 . ? 2_665 ? 5 AC1 8 ARG A 204 ? ARG A 217 . ? 1_555 ? 6 AC1 8 ARG A 207 ? ARG A 220 . ? 1_555 ? 7 AC1 8 HOH E . ? HOH A 312 . ? 1_555 ? 8 AC1 8 HOH E . ? HOH A 385 . ? 1_555 ? 9 AC2 5 ARG A 131 ? ARG A 144 . ? 1_555 ? 10 AC2 5 VAL A 182 ? VAL A 195 . ? 8_665 ? 11 AC2 5 SER A 185 ? SER A 198 . ? 8_665 ? 12 AC2 5 HIS A 191 ? HIS A 204 . ? 8_665 ? 13 AC2 5 HOH E . ? HOH A 342 . ? 8_665 ? 14 AC3 2 LEU A 89 ? LEU A 102 . ? 1_555 ? 15 AC3 2 ALA A 90 ? ALA A 103 . ? 1_555 ? # _atom_sites.entry_id 3BQY _atom_sites.fract_transf_matrix[1][1] 0.011940 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011940 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011947 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 14 ? ? ? A . n A 1 2 HIS 2 15 ? ? ? A . n A 1 3 ASP 3 16 16 ASP ASP A . n A 1 4 ARG 4 17 17 ARG ARG A . n A 1 5 ALA 5 18 18 ALA ALA A . n A 1 6 ARG 6 19 19 ARG ARG A . n A 1 7 THR 7 20 20 THR THR A . n A 1 8 VAL 8 21 21 VAL VAL A . n A 1 9 GLN 9 22 22 GLN GLN A . n A 1 10 THR 10 23 23 THR THR A . n A 1 11 ALA 11 24 24 ALA ALA A . n A 1 12 LEU 12 25 25 LEU LEU A . n A 1 13 ASP 13 26 26 ASP ASP A . n A 1 14 LEU 14 27 27 LEU LEU A . n A 1 15 LEU 15 28 28 LEU LEU A . n A 1 16 ASN 16 29 29 ASN ASN A . n A 1 17 GLU 17 30 30 GLU GLU A . n A 1 18 SER 18 31 31 SER SER A . n A 1 19 GLY 19 32 32 GLY GLY A . n A 1 20 LEU 20 33 33 LEU LEU A . n A 1 21 ASP 21 34 34 ASP ASP A . n A 1 22 THR 22 35 35 THR THR A . n A 1 23 LEU 23 36 36 LEU LEU A . n A 1 24 THR 24 37 37 THR THR A . n A 1 25 MSE 25 38 38 MSE MSE A . n A 1 26 ARG 26 39 39 ARG ARG A . n A 1 27 ARG 27 40 40 ARG ARG A . n A 1 28 LEU 28 41 41 LEU LEU A . n A 1 29 ALA 29 42 42 ALA ALA A . n A 1 30 GLN 30 43 43 GLN GLN A . n A 1 31 ALA 31 44 44 ALA ALA A . n A 1 32 MSE 32 45 45 MSE MSE A . n A 1 33 ASP 33 46 46 ASP ASP A . n A 1 34 VAL 34 47 47 VAL VAL A . n A 1 35 GLN 35 48 48 GLN GLN A . n A 1 36 ALA 36 49 49 ALA ALA A . n A 1 37 GLY 37 50 50 GLY GLY A . n A 1 38 ALA 38 51 51 ALA ALA A . n A 1 39 LEU 39 52 52 LEU LEU A . n A 1 40 TYR 40 53 53 TYR TYR A . n A 1 41 ARG 41 54 54 ARG ARG A . n A 1 42 TYR 42 55 55 TYR TYR A . n A 1 43 PHE 43 56 56 PHE PHE A . n A 1 44 ALA 44 57 57 ALA ALA A . n A 1 45 ALA 45 58 58 ALA ALA A . n A 1 46 LYS 46 59 59 LYS LYS A . n A 1 47 GLN 47 60 60 GLN GLN A . n A 1 48 ASP 48 61 61 ASP ASP A . n A 1 49 LEU 49 62 62 LEU LEU A . n A 1 50 LEU 50 63 63 LEU LEU A . n A 1 51 THR 51 64 64 THR THR A . n A 1 52 ALA 52 65 65 ALA ALA A . n A 1 53 MSE 53 66 66 MSE MSE A . n A 1 54 ALA 54 67 67 ALA ALA A . n A 1 55 GLU 55 68 68 GLU GLU A . n A 1 56 HIS 56 69 69 HIS HIS A . n A 1 57 MSE 57 70 70 MSE MSE A . n A 1 58 VAL 58 71 71 VAL VAL A . n A 1 59 ASP 59 72 72 ASP ASP A . n A 1 60 GLY 60 73 73 GLY GLY A . n A 1 61 VAL 61 74 74 VAL VAL A . n A 1 62 ALA 62 75 75 ALA ALA A . n A 1 63 ASP 63 76 76 ASP ASP A . n A 1 64 ALA 64 77 77 ALA ALA A . n A 1 65 ALA 65 78 78 ALA ALA A . n A 1 66 GLY 66 79 79 GLY GLY A . n A 1 67 ALA 67 80 80 ALA ALA A . n A 1 68 THR 68 81 81 THR THR A . n A 1 69 GLY 69 82 82 GLY GLY A . n A 1 70 ASP 70 83 83 ASP ASP A . n A 1 71 GLY 71 84 84 GLY GLY A . n A 1 72 ASP 72 85 85 ASP ASP A . n A 1 73 TRP 73 86 86 TRP TRP A . n A 1 74 SER 74 87 87 SER SER A . n A 1 75 GLU 75 88 88 GLU GLU A . n A 1 76 ARG 76 89 89 ARG ARG A . n A 1 77 THR 77 90 90 THR THR A . n A 1 78 ALA 78 91 91 ALA ALA A . n A 1 79 ARG 79 92 92 ARG ARG A . n A 1 80 LEU 80 93 93 LEU LEU A . n A 1 81 ALA 81 94 94 ALA ALA A . n A 1 82 ARG 82 95 95 ARG ARG A . n A 1 83 ALA 83 96 96 ALA ALA A . n A 1 84 LEU 84 97 97 LEU LEU A . n A 1 85 ARG 85 98 98 ARG ARG A . n A 1 86 ALA 86 99 99 ALA ALA A . n A 1 87 ALA 87 100 100 ALA ALA A . n A 1 88 LEU 88 101 101 LEU LEU A . n A 1 89 LEU 89 102 102 LEU LEU A . n A 1 90 ALA 90 103 103 ALA ALA A . n A 1 91 HIS 91 104 104 HIS HIS A . n A 1 92 ARG 92 105 105 ARG ARG A . n A 1 93 ASP 93 106 106 ASP ASP A . n A 1 94 GLY 94 107 107 GLY GLY A . n A 1 95 ALA 95 108 108 ALA ALA A . n A 1 96 ARG 96 109 109 ARG ARG A . n A 1 97 VAL 97 110 110 VAL VAL A . n A 1 98 PHE 98 111 111 PHE PHE A . n A 1 99 ALA 99 112 112 ALA ALA A . n A 1 100 GLY 100 113 113 GLY GLY A . n A 1 101 THR 101 114 114 THR THR A . n A 1 102 HIS 102 115 115 HIS HIS A . n A 1 103 ALA 103 116 116 ALA ALA A . n A 1 104 THR 104 117 117 THR THR A . n A 1 105 GLY 105 118 118 GLY GLY A . n A 1 106 PRO 106 119 119 PRO PRO A . n A 1 107 ASN 107 120 120 ASN ASN A . n A 1 108 THR 108 121 121 THR THR A . n A 1 109 LEU 109 122 122 LEU LEU A . n A 1 110 ARG 110 123 123 ARG ARG A . n A 1 111 PHE 111 124 124 PHE PHE A . n A 1 112 ALA 112 125 125 ALA ALA A . n A 1 113 ASP 113 126 126 ASP ASP A . n A 1 114 GLY 114 127 127 GLY GLY A . n A 1 115 LEU 115 128 128 LEU LEU A . n A 1 116 VAL 116 129 129 VAL VAL A . n A 1 117 GLY 117 130 130 GLY GLY A . n A 1 118 VAL 118 131 131 VAL VAL A . n A 1 119 LEU 119 132 132 LEU LEU A . n A 1 120 ARG 120 133 133 ARG ARG A . n A 1 121 GLU 121 134 134 GLU GLU A . n A 1 122 ALA 122 135 135 ALA ALA A . n A 1 123 GLY 123 136 136 GLY GLY A . n A 1 124 PHE 124 137 137 PHE PHE A . n A 1 125 GLY 125 138 138 GLY GLY A . n A 1 126 ASP 126 139 139 ASP ASP A . n A 1 127 GLY 127 140 140 GLY GLY A . n A 1 128 ASP 128 141 141 ASP ASP A . n A 1 129 ALA 129 142 142 ALA ALA A . n A 1 130 ALA 130 143 143 ALA ALA A . n A 1 131 ARG 131 144 144 ARG ARG A . n A 1 132 ALA 132 145 145 ALA ALA A . n A 1 133 LEU 133 146 146 LEU LEU A . n A 1 134 TYR 134 147 147 TYR TYR A . n A 1 135 SER 135 148 148 SER SER A . n A 1 136 VAL 136 149 149 VAL VAL A . n A 1 137 ALA 137 150 150 ALA ALA A . n A 1 138 ASN 138 151 151 ASN ASN A . n A 1 139 PHE 139 152 152 PHE PHE A . n A 1 140 THR 140 153 153 THR THR A . n A 1 141 VAL 141 154 154 VAL VAL A . n A 1 142 GLY 142 155 155 GLY GLY A . n A 1 143 HIS 143 156 156 HIS HIS A . n A 1 144 THR 144 157 157 THR THR A . n A 1 145 LEU 145 158 158 LEU LEU A . n A 1 146 GLU 146 159 159 GLU GLU A . n A 1 147 GLU 147 160 160 GLU GLU A . n A 1 148 GLN 148 161 161 GLN GLN A . n A 1 149 ALA 149 162 162 ALA ALA A . n A 1 150 ALA 150 163 163 ALA ALA A . n A 1 151 LEU 151 164 164 LEU LEU A . n A 1 152 THR 152 165 165 THR THR A . n A 1 153 PRO 153 166 166 PRO PRO A . n A 1 154 GLY 154 167 167 GLY GLY A . n A 1 155 GLY 155 168 168 GLY GLY A . n A 1 156 GLY 156 169 169 GLY GLY A . n A 1 157 GLY 157 170 170 GLY GLY A . n A 1 158 PRO 158 171 171 PRO PRO A . n A 1 159 LEU 159 172 172 LEU LEU A . n A 1 160 ASP 160 173 173 ASP ASP A . n A 1 161 GLU 161 174 174 GLU GLU A . n A 1 162 ALA 162 175 175 ALA ALA A . n A 1 163 THR 163 176 176 THR THR A . n A 1 164 LEU 164 177 177 LEU LEU A . n A 1 165 ARG 165 178 178 ARG ARG A . n A 1 166 GLU 166 179 179 GLU GLU A . n A 1 167 ALA 167 180 180 ALA ALA A . n A 1 168 VAL 168 181 181 VAL VAL A . n A 1 169 ALA 169 182 182 ALA ALA A . n A 1 170 ALA 170 183 183 ALA ALA A . n A 1 171 GLY 171 184 184 GLY GLY A . n A 1 172 THR 172 185 185 THR THR A . n A 1 173 TYR 173 186 186 TYR TYR A . n A 1 174 PRO 174 187 187 PRO PRO A . n A 1 175 HIS 175 188 188 HIS HIS A . n A 1 176 LEU 176 189 189 LEU LEU A . n A 1 177 ALA 177 190 190 ALA ALA A . n A 1 178 ALA 178 191 191 ALA ALA A . n A 1 179 THR 179 192 192 THR THR A . n A 1 180 LEU 180 193 193 LEU LEU A . n A 1 181 PRO 181 194 194 PRO PRO A . n A 1 182 VAL 182 195 195 VAL VAL A . n A 1 183 LEU 183 196 196 LEU LEU A . n A 1 184 THR 184 197 197 THR THR A . n A 1 185 SER 185 198 198 SER SER A . n A 1 186 THR 186 199 199 THR THR A . n A 1 187 ASP 187 200 200 ASP ASP A . n A 1 188 PHE 188 201 201 PHE PHE A . n A 1 189 THR 189 202 202 THR THR A . n A 1 190 ALA 190 203 203 ALA ALA A . n A 1 191 HIS 191 204 204 HIS HIS A . n A 1 192 PHE 192 205 205 PHE PHE A . n A 1 193 GLU 193 206 206 GLU GLU A . n A 1 194 PHE 194 207 207 PHE PHE A . n A 1 195 GLY 195 208 208 GLY GLY A . n A 1 196 LEU 196 209 209 LEU LEU A . n A 1 197 ARG 197 210 210 ARG ARG A . n A 1 198 LEU 198 211 211 LEU LEU A . n A 1 199 LEU 199 212 212 LEU LEU A . n A 1 200 LEU 200 213 213 LEU LEU A . n A 1 201 ASP 201 214 214 ASP ASP A . n A 1 202 GLY 202 215 215 GLY GLY A . n A 1 203 LEU 203 216 216 LEU LEU A . n A 1 204 ARG 204 217 217 ARG ARG A . n A 1 205 ALA 205 218 218 ALA ALA A . n A 1 206 VAL 206 219 219 VAL VAL A . n A 1 207 ARG 207 220 220 ARG ARG A . n A 1 208 GLY 208 221 ? ? ? A . n A 1 209 SER 209 222 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 302 302 PO4 PO4 A . C 2 PO4 1 303 303 PO4 PO4 A . D 3 ACY 1 301 301 ACY ACY A . E 4 HOH 1 304 1 HOH HOH A . E 4 HOH 2 305 2 HOH HOH A . E 4 HOH 3 306 3 HOH HOH A . E 4 HOH 4 307 4 HOH HOH A . E 4 HOH 5 308 5 HOH HOH A . E 4 HOH 6 309 6 HOH HOH A . E 4 HOH 7 310 7 HOH HOH A . E 4 HOH 8 311 8 HOH HOH A . E 4 HOH 9 312 9 HOH HOH A . E 4 HOH 10 313 10 HOH HOH A . E 4 HOH 11 314 11 HOH HOH A . E 4 HOH 12 315 12 HOH HOH A . E 4 HOH 13 316 13 HOH HOH A . E 4 HOH 14 317 14 HOH HOH A . E 4 HOH 15 318 15 HOH HOH A . E 4 HOH 16 319 16 HOH HOH A . E 4 HOH 17 320 17 HOH HOH A . E 4 HOH 18 321 18 HOH HOH A . E 4 HOH 19 322 19 HOH HOH A . E 4 HOH 20 323 20 HOH HOH A . E 4 HOH 21 324 21 HOH HOH A . E 4 HOH 22 325 22 HOH HOH A . E 4 HOH 23 326 23 HOH HOH A . E 4 HOH 24 327 24 HOH HOH A . E 4 HOH 25 328 25 HOH HOH A . E 4 HOH 26 329 26 HOH HOH A . E 4 HOH 27 330 27 HOH HOH A . E 4 HOH 28 331 28 HOH HOH A . E 4 HOH 29 332 29 HOH HOH A . E 4 HOH 30 333 30 HOH HOH A . E 4 HOH 31 334 31 HOH HOH A . E 4 HOH 32 335 32 HOH HOH A . E 4 HOH 33 336 33 HOH HOH A . E 4 HOH 34 337 34 HOH HOH A . E 4 HOH 35 338 35 HOH HOH A . E 4 HOH 36 339 36 HOH HOH A . E 4 HOH 37 340 37 HOH HOH A . E 4 HOH 38 341 38 HOH HOH A . E 4 HOH 39 342 39 HOH HOH A . E 4 HOH 40 343 40 HOH HOH A . E 4 HOH 41 344 41 HOH HOH A . E 4 HOH 42 345 42 HOH HOH A . E 4 HOH 43 346 43 HOH HOH A . E 4 HOH 44 347 44 HOH HOH A . E 4 HOH 45 348 45 HOH HOH A . E 4 HOH 46 349 46 HOH HOH A . E 4 HOH 47 350 47 HOH HOH A . E 4 HOH 48 351 48 HOH HOH A . E 4 HOH 49 352 49 HOH HOH A . E 4 HOH 50 353 50 HOH HOH A . E 4 HOH 51 354 51 HOH HOH A . E 4 HOH 52 355 52 HOH HOH A . E 4 HOH 53 356 53 HOH HOH A . E 4 HOH 54 357 54 HOH HOH A . E 4 HOH 55 358 55 HOH HOH A . E 4 HOH 56 359 56 HOH HOH A . E 4 HOH 57 360 57 HOH HOH A . E 4 HOH 58 361 58 HOH HOH A . E 4 HOH 59 362 59 HOH HOH A . E 4 HOH 60 363 60 HOH HOH A . E 4 HOH 61 364 61 HOH HOH A . E 4 HOH 62 365 62 HOH HOH A . E 4 HOH 63 366 63 HOH HOH A . E 4 HOH 64 367 64 HOH HOH A . E 4 HOH 65 368 65 HOH HOH A . E 4 HOH 66 369 66 HOH HOH A . E 4 HOH 67 370 67 HOH HOH A . E 4 HOH 68 371 68 HOH HOH A . E 4 HOH 69 372 69 HOH HOH A . E 4 HOH 70 373 70 HOH HOH A . E 4 HOH 71 374 71 HOH HOH A . E 4 HOH 72 375 72 HOH HOH A . E 4 HOH 73 376 73 HOH HOH A . E 4 HOH 74 377 74 HOH HOH A . E 4 HOH 75 378 75 HOH HOH A . E 4 HOH 76 379 76 HOH HOH A . E 4 HOH 77 380 77 HOH HOH A . E 4 HOH 78 381 78 HOH HOH A . E 4 HOH 79 382 79 HOH HOH A . E 4 HOH 80 383 80 HOH HOH A . E 4 HOH 81 384 81 HOH HOH A . E 4 HOH 82 385 82 HOH HOH A . E 4 HOH 83 386 83 HOH HOH A . E 4 HOH 84 387 84 HOH HOH A . E 4 HOH 85 388 85 HOH HOH A . E 4 HOH 86 389 86 HOH HOH A . E 4 HOH 87 390 87 HOH HOH A . E 4 HOH 88 391 88 HOH HOH A . E 4 HOH 89 392 89 HOH HOH A . E 4 HOH 90 393 90 HOH HOH A . E 4 HOH 91 394 91 HOH HOH A . E 4 HOH 92 395 92 HOH HOH A . E 4 HOH 93 396 93 HOH HOH A . E 4 HOH 94 397 94 HOH HOH A . E 4 HOH 95 398 95 HOH HOH A . E 4 HOH 96 399 96 HOH HOH A . E 4 HOH 97 400 97 HOH HOH A . E 4 HOH 98 401 98 HOH HOH A . E 4 HOH 99 402 99 HOH HOH A . E 4 HOH 100 403 100 HOH HOH A . E 4 HOH 101 404 101 HOH HOH A . E 4 HOH 102 405 102 HOH HOH A . E 4 HOH 103 406 103 HOH HOH A . E 4 HOH 104 407 104 HOH HOH A . E 4 HOH 105 408 105 HOH HOH A . E 4 HOH 106 409 106 HOH HOH A . E 4 HOH 107 410 107 HOH HOH A . E 4 HOH 108 411 108 HOH HOH A . E 4 HOH 109 412 109 HOH HOH A . E 4 HOH 110 413 110 HOH HOH A . E 4 HOH 111 414 111 HOH HOH A . E 4 HOH 112 415 112 HOH HOH A . E 4 HOH 113 416 113 HOH HOH A . E 4 HOH 114 417 114 HOH HOH A . E 4 HOH 115 418 115 HOH HOH A . E 4 HOH 116 419 116 HOH HOH A . E 4 HOH 117 420 117 HOH HOH A . E 4 HOH 118 421 118 HOH HOH A . E 4 HOH 119 422 119 HOH HOH A . E 4 HOH 120 423 120 HOH HOH A . E 4 HOH 121 424 121 HOH HOH A . E 4 HOH 122 425 122 HOH HOH A . E 4 HOH 123 426 123 HOH HOH A . E 4 HOH 124 427 124 HOH HOH A . E 4 HOH 125 428 125 HOH HOH A . E 4 HOH 126 429 126 HOH HOH A . E 4 HOH 127 430 127 HOH HOH A . E 4 HOH 128 431 128 HOH HOH A . E 4 HOH 129 432 129 HOH HOH A . E 4 HOH 130 433 130 HOH HOH A . E 4 HOH 131 434 131 HOH HOH A . E 4 HOH 132 435 132 HOH HOH A . E 4 HOH 133 436 133 HOH HOH A . E 4 HOH 134 437 134 HOH HOH A . E 4 HOH 135 438 135 HOH HOH A . E 4 HOH 136 439 136 HOH HOH A . E 4 HOH 137 440 137 HOH HOH A . E 4 HOH 138 441 138 HOH HOH A . E 4 HOH 139 442 139 HOH HOH A . E 4 HOH 140 443 140 HOH HOH A . E 4 HOH 141 444 141 HOH HOH A . E 4 HOH 142 445 142 HOH HOH A . E 4 HOH 143 446 143 HOH HOH A . E 4 HOH 144 447 144 HOH HOH A . E 4 HOH 145 448 145 HOH HOH A . E 4 HOH 146 449 146 HOH HOH A . E 4 HOH 147 450 147 HOH HOH A . E 4 HOH 148 451 148 HOH HOH A . E 4 HOH 149 452 149 HOH HOH A . E 4 HOH 150 453 150 HOH HOH A . E 4 HOH 151 454 151 HOH HOH A . E 4 HOH 152 455 152 HOH HOH A . E 4 HOH 153 456 153 HOH HOH A . E 4 HOH 154 457 154 HOH HOH A . E 4 HOH 155 458 155 HOH HOH A . E 4 HOH 156 459 156 HOH HOH A . E 4 HOH 157 460 157 HOH HOH A . E 4 HOH 158 461 158 HOH HOH A . E 4 HOH 159 462 159 HOH HOH A . E 4 HOH 160 463 160 HOH HOH A . E 4 HOH 161 464 161 HOH HOH A . E 4 HOH 162 465 162 HOH HOH A . E 4 HOH 163 466 163 HOH HOH A . E 4 HOH 164 467 164 HOH HOH A . E 4 HOH 165 468 165 HOH HOH A . E 4 HOH 166 469 166 HOH HOH A . E 4 HOH 167 470 167 HOH HOH A . E 4 HOH 168 471 168 HOH HOH A . E 4 HOH 169 472 169 HOH HOH A . E 4 HOH 170 473 170 HOH HOH A . E 4 HOH 171 474 171 HOH HOH A . E 4 HOH 172 475 172 HOH HOH A . E 4 HOH 173 476 173 HOH HOH A . E 4 HOH 174 477 174 HOH HOH A . E 4 HOH 175 478 175 HOH HOH A . E 4 HOH 176 479 176 HOH HOH A . E 4 HOH 177 480 177 HOH HOH A . E 4 HOH 178 481 178 HOH HOH A . E 4 HOH 179 482 179 HOH HOH A . E 4 HOH 180 483 180 HOH HOH A . E 4 HOH 181 484 181 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 38 ? MET SELENOMETHIONINE 2 A MSE 32 A MSE 45 ? MET SELENOMETHIONINE 3 A MSE 53 A MSE 66 ? MET SELENOMETHIONINE 4 A MSE 57 A MSE 70 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 5440 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 83.7550000000 -1.0000000000 0.0000000000 0.0000000000 83.7550000000 0.0000000000 0.0000000000 -1.0000000000 41.8500000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-01-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.900 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 24079 _diffrn_reflns.pdbx_Rmerge_I_obs 0.103 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 2.02 _diffrn_reflns.av_sigmaI_over_netI 7.90 _diffrn_reflns.pdbx_redundancy 8.10 _diffrn_reflns.pdbx_percent_possible_obs 99.80 _diffrn_reflns.number 195817 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.68 50.00 ? ? 0.082 ? 7.432 7.60 98.90 1 3.72 4.68 ? ? 0.072 ? 4.375 6.70 99.50 1 3.25 3.72 ? ? 0.075 ? 3.395 7.70 100.00 1 2.95 3.25 ? ? 0.095 ? 2.640 8.00 100.00 1 2.74 2.95 ? ? 0.106 ? 2.095 8.10 100.00 1 2.58 2.74 ? ? 0.119 ? 1.681 8.20 100.00 1 2.45 2.58 ? ? 0.134 ? 1.417 8.30 100.00 1 2.34 2.45 ? ? 0.145 ? 1.246 8.40 100.00 1 2.25 2.34 ? ? 0.172 ? 1.100 8.40 100.00 1 2.17 2.25 ? ? 0.192 ? 1.027 8.40 100.00 1 2.11 2.17 ? ? 0.237 ? 0.985 8.50 100.00 1 2.05 2.11 ? ? 0.314 ? 0.942 8.50 99.80 1 1.99 2.05 ? ? 0.404 ? 0.843 8.50 99.90 1 1.94 1.99 ? ? 0.539 ? 0.861 8.50 99.70 1 1.90 1.94 ? ? 0.692 ? 0.840 8.40 99.60 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 6.4653 59.0063 28.7214 -0.0373 -0.0689 0.1431 0.0447 -0.0852 -0.0101 4.4229 6.4675 10.2435 -2.6085 -1.5001 4.1096 -0.0806 -0.4965 0.5772 -0.0455 -0.1824 1.1481 -0.2532 -0.7053 -0.6148 'X-RAY DIFFRACTION' 2 ? refined 27.0260 44.3865 28.5747 -0.0429 -0.1062 -0.0747 -0.0193 0.0162 0.0253 1.4669 0.9156 2.0002 -0.5309 0.4881 -0.6487 0.0697 0.0743 -0.1441 0.0481 0.0063 0.1523 0.0172 0.0120 -0.0034 'X-RAY DIFFRACTION' 3 ? refined 30.4766 51.9318 2.2111 -0.0161 0.2300 0.0168 -0.0116 -0.0612 0.0799 0.3041 1.6075 3.6370 -0.5911 -0.7067 0.4171 0.1331 0.0472 -0.1803 0.2688 0.1648 0.1985 -0.3651 -0.0120 -0.7654 'X-RAY DIFFRACTION' 4 ? refined 36.1875 39.7285 19.6525 -0.0018 -0.0596 -0.1213 0.0019 0.0265 0.0093 9.1530 1.8454 6.0543 -1.5897 5.3446 -0.7265 0.1128 0.0141 -0.1269 -0.0175 -0.0790 0.0395 -0.0650 0.4244 -0.0270 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 16 A 66 ? A 3 A 53 'X-RAY DIFFRACTION' ? 2 2 A 67 A 163 ? A 54 A 150 'X-RAY DIFFRACTION' ? 3 3 A 164 A 200 ? A 151 A 187 'X-RAY DIFFRACTION' ? 4 4 A 201 A 220 ? A 188 A 207 'X-RAY DIFFRACTION' ? # loop_ _pdbx_phasing_MAD_set.id _pdbx_phasing_MAD_set.d_res_high _pdbx_phasing_MAD_set.d_res_low _pdbx_phasing_MAD_set.reflns_acentric _pdbx_phasing_MAD_set.loc_acentric _pdbx_phasing_MAD_set.power_acentric _pdbx_phasing_MAD_set.R_cullis_acentric _pdbx_phasing_MAD_set.reflns_centric _pdbx_phasing_MAD_set.loc_centric _pdbx_phasing_MAD_set.power_centric _pdbx_phasing_MAD_set.R_cullis_centric 1 1.95 50.00 19132 0.300 0.000 1.990 3099 0.200 0.000 1.000 2 1.95 50.00 19119 7.600 0.900 0.880 3092 11.000 0.740 0.810 # loop_ _pdbx_phasing_MAD_set_shell.id _pdbx_phasing_MAD_set_shell.d_res_high _pdbx_phasing_MAD_set_shell.d_res_low _pdbx_phasing_MAD_set_shell.reflns_acentric _pdbx_phasing_MAD_set_shell.loc_acentric _pdbx_phasing_MAD_set_shell.power_acentric _pdbx_phasing_MAD_set_shell.R_cullis_acentric _pdbx_phasing_MAD_set_shell.reflns_centric _pdbx_phasing_MAD_set_shell.loc_centric _pdbx_phasing_MAD_set_shell.power_centric _pdbx_phasing_MAD_set_shell.R_cullis_centric 1 12.25 50.00 49 0.900 0.000 1.370 59 0.500 0.000 1.000 1 6.98 12.25 279 0.900 0.000 1.480 153 0.500 0.000 1.000 1 4.88 6.98 751 0.900 0.000 2.320 263 0.400 0.000 1.000 1 3.75 4.88 1414 0.600 0.000 1.240 337 0.400 0.000 1.000 1 3.05 3.75 2289 0.500 0.000 1.620 440 0.300 0.000 1.000 1 2.57 3.05 3396 0.400 0.000 2.370 526 0.100 0.000 1.000 1 2.22 2.57 4736 0.300 0.000 2.490 624 0.100 0.000 1.000 1 1.95 2.22 6218 0.200 0.000 2.870 697 0.100 0.000 1.000 2 12.25 50.00 49 12.600 1.700 0.770 57 17.300 1.340 0.900 2 6.98 12.25 278 11.800 1.700 0.750 153 15.700 1.300 0.680 2 4.88 6.98 751 9.300 1.970 0.620 263 12.400 1.270 0.620 2 3.75 4.88 1414 10.100 1.330 0.780 337 14.100 0.840 0.740 2 3.05 3.75 2288 8.300 1.260 0.790 440 11.400 0.900 0.740 2 2.57 3.05 3396 7.000 1.030 0.860 525 9.400 0.700 0.850 2 2.22 2.57 4734 7.000 0.720 0.950 622 9.400 0.490 0.930 2 1.95 2.22 6209 7.300 0.450 1.000 695 9.900 0.280 0.990 # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.fract_x _pdbx_phasing_MAD_set_site.fract_y _pdbx_phasing_MAD_set_site.fract_z _pdbx_phasing_MAD_set_site.b_iso _pdbx_phasing_MAD_set_site.occupancy 1 Se -0.361 -0.170 -0.081 32.24762 0.000 2 Se -0.402 -0.251 -0.112 40.58062 0.000 3 Se -0.481 -0.182 -0.109 40.14969 0.000 4 Se -0.304 -0.105 -0.057 55.55269 0.000 5 Se -0.361 -0.170 -0.081 28.28687 -0.197 6 Se -0.402 -0.251 -0.112 37.58278 -0.153 7 Se -0.481 -0.183 -0.109 42.56535 -0.131 8 Se -0.304 -0.105 -0.057 52.60303 -0.089 # loop_ _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom _pdbx_phasing_MAD_shell.reflns_centric _pdbx_phasing_MAD_shell.fom_centric _pdbx_phasing_MAD_shell.reflns_acentric _pdbx_phasing_MAD_shell.fom_acentric 12.25 50.00 108 0.601 59 0.489 49 0.737 6.98 12.25 432 0.680 153 0.591 279 0.729 4.88 6.98 1014 0.756 263 0.571 751 0.821 3.75 4.88 1751 0.669 337 0.473 1414 0.716 3.05 3.75 2729 0.663 440 0.483 2289 0.698 2.57 3.05 3922 0.571 526 0.360 3396 0.603 2.22 2.57 5360 0.421 624 0.235 4736 0.445 1.95 2.22 6915 0.242 697 0.113 6218 0.256 # _pdbx_phasing_dm.entry_id 3BQY _pdbx_phasing_dm.method 'Solvent flattening and Histogram matching' _pdbx_phasing_dm.reflns 23996 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 7.230 100.000 42.600 ? ? ? 0.877 ? ? 504 5.650 7.230 33.500 ? ? ? 0.937 ? ? 509 4.900 5.650 37.000 ? ? ? 0.935 ? ? 512 4.430 4.900 37.500 ? ? ? 0.938 ? ? 524 4.070 4.430 43.500 ? ? ? 0.932 ? ? 556 3.780 4.070 39.900 ? ? ? 0.940 ? ? 625 3.550 3.780 38.600 ? ? ? 0.932 ? ? 645 3.360 3.550 37.800 ? ? ? 0.928 ? ? 690 3.190 3.360 39.100 ? ? ? 0.920 ? ? 705 3.050 3.190 45.500 ? ? ? 0.894 ? ? 764 2.920 3.050 40.800 ? ? ? 0.910 ? ? 783 2.810 2.920 44.000 ? ? ? 0.914 ? ? 822 2.710 2.810 40.900 ? ? ? 0.913 ? ? 833 2.620 2.710 43.900 ? ? ? 0.914 ? ? 875 2.540 2.620 43.900 ? ? ? 0.920 ? ? 890 2.470 2.540 45.700 ? ? ? 0.912 ? ? 908 2.400 2.470 50.100 ? ? ? 0.916 ? ? 961 2.340 2.400 50.800 ? ? ? 0.914 ? ? 967 2.280 2.340 53.400 ? ? ? 0.916 ? ? 1003 2.230 2.280 53.600 ? ? ? 0.918 ? ? 1023 2.180 2.230 55.300 ? ? ? 0.913 ? ? 1065 2.130 2.180 57.700 ? ? ? 0.918 ? ? 1060 2.080 2.130 62.500 ? ? ? 0.914 ? ? 1095 2.040 2.080 61.800 ? ? ? 0.912 ? ? 1068 2.000 2.040 67.700 ? ? ? 0.903 ? ? 1166 1.970 2.000 70.700 ? ? ? 0.880 ? ? 1151 1.930 1.970 81.600 ? ? ? 0.835 ? ? 1149 1.900 1.930 87.900 ? ? ? 0.692 ? ? 1143 # _phasing.method MAD # _phasing_MAD.entry_id 3BQY _phasing_MAD.pdbx_d_res_high 1.95 _phasing_MAD.pdbx_d_res_low 50.00 _phasing_MAD.pdbx_reflns 22231 _phasing_MAD.pdbx_fom 0.462 _phasing_MAD.pdbx_reflns_centric 3099 _phasing_MAD.pdbx_fom_centric 0.341 _phasing_MAD.pdbx_reflns_acentric 19132 _phasing_MAD.pdbx_fom_acentric 0.482 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 MLPHARE . ? other 'Z.Otwinowski or E.Dodson' 'ccp4@dl.ac.uk, ccp4@yorvic.york.ac.uk' phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 DM 5.0 ? program 'K. Cowtan' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 5 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 7 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-3000 . ? ? ? ? phasing ? ? ? 9 SHELXD . ? ? ? ? phasing ? ? ? 10 SHELXE . ? ? ? ? 'model building' ? ? ? 11 SOLVE . ? ? ? ? phasing ? ? ? 12 RESOLVE . ? ? ? ? phasing ? ? ? 13 ARP/wARP . ? ? ? ? 'model building' ? ? ? 14 CCP4 . ? ? ? ? phasing ? ? ? 15 O . ? ? ? ? 'model building' ? ? ? 16 Coot . ? ? ? ? 'model building' ? ? ? 17 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 14 ? A GLY 1 2 1 Y 1 A HIS 15 ? A HIS 2 3 1 Y 1 A GLY 221 ? A GLY 208 4 1 Y 1 A SER 222 ? A SER 209 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'ACETIC ACID' ACY 4 water HOH #