data_3BS1 # _entry.id 3BS1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BS1 pdb_00003bs1 10.2210/pdb3bs1/pdb NDB PD1057 ? ? RCSB RCSB045896 ? ? WWPDB D_1000045896 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_conn_type 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.conn_type_id' 17 3 'Structure model' '_struct_conn.id' 18 3 'Structure model' '_struct_conn.pdbx_dist_value' 19 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 3 'Structure model' '_struct_conn_type.id' 35 3 'Structure model' '_struct_ref_seq_dif.details' 36 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BS1 _pdbx_database_status.recvd_initial_deposition_date 2007-12-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sidote, D.J.' 1 'Barbieri, C.' 2 'Wu, T.' 3 'Stock, A.M.' 4 # _citation.id primary _citation.title 'Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with an Unusual Mode of Binding.' _citation.journal_abbrev Structure _citation.journal_volume 16 _citation.page_first 727 _citation.page_last 735 _citation.year 2008 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18462677 _citation.pdbx_database_id_DOI 10.1016/j.str.2008.02.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sidote, D.J.' 1 ? primary 'Barbieri, C.M.' 2 ? primary 'Wu, T.' 3 ? primary 'Stock, A.M.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DTP*DTP*DTP*DAP*DAP*DCP*DAP*DGP*DTP*DTP*DAP*DAP*DGP*(BRU)P*DAP*DT)-3') ; 4976.097 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*DAP*DAP*(BRU)P*DAP*DCP*DTP*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DTP*DAP*DA)-3') ; 4945.086 1 ? ? ? ? 3 polymer man 'Accessory gene regulator protein A' 12357.919 1 ? ? 'C-terminal domain, residues 137-238' ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 223 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DT)(DT)(DT)(DA)(DA)(DC)(DA)(DG)(DT)(DT)(DA)(DA)(DG)(BRU)(DA)(DT)' TTTAACAGTTAAGUAT B ? 2 polydeoxyribonucleotide no yes '(DA)(DA)(BRU)(DA)(DC)(DT)(DT)(DA)(DA)(DC)(DT)(DG)(DT)(DT)(DA)(DA)' AAUACTTAACTGTTAA C ? 3 'polypeptide(L)' no no ;MDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDS KERIVYFKNKEHCYASVRNVKKI ; ;MDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDS KERIVYFKNKEHCYASVRNVKKI ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DT n 1 4 DA n 1 5 DA n 1 6 DC n 1 7 DA n 1 8 DG n 1 9 DT n 1 10 DT n 1 11 DA n 1 12 DA n 1 13 DG n 1 14 BRU n 1 15 DA n 1 16 DT n 2 1 DA n 2 2 DA n 2 3 BRU n 2 4 DA n 2 5 DC n 2 6 DT n 2 7 DT n 2 8 DA n 2 9 DA n 2 10 DC n 2 11 DT n 2 12 DG n 2 13 DT n 2 14 DT n 2 15 DA n 2 16 DA n 3 1 MET n 3 2 ASP n 3 3 ASN n 3 4 SER n 3 5 VAL n 3 6 GLU n 3 7 THR n 3 8 ILE n 3 9 GLU n 3 10 LEU n 3 11 LYS n 3 12 ARG n 3 13 GLY n 3 14 SER n 3 15 ASN n 3 16 SER n 3 17 VAL n 3 18 TYR n 3 19 VAL n 3 20 GLN n 3 21 TYR n 3 22 ASP n 3 23 ASP n 3 24 ILE n 3 25 MET n 3 26 PHE n 3 27 PHE n 3 28 GLU n 3 29 SER n 3 30 SER n 3 31 THR n 3 32 LYS n 3 33 SER n 3 34 HIS n 3 35 ARG n 3 36 LEU n 3 37 ILE n 3 38 ALA n 3 39 HIS n 3 40 LEU n 3 41 ASP n 3 42 ASN n 3 43 ARG n 3 44 GLN n 3 45 ILE n 3 46 GLU n 3 47 PHE n 3 48 TYR n 3 49 GLY n 3 50 ASN n 3 51 LEU n 3 52 LYS n 3 53 GLU n 3 54 LEU n 3 55 SER n 3 56 GLN n 3 57 LEU n 3 58 ASP n 3 59 ASP n 3 60 ARG n 3 61 PHE n 3 62 PHE n 3 63 ARG n 3 64 CYS n 3 65 HIS n 3 66 ASN n 3 67 SER n 3 68 PHE n 3 69 VAL n 3 70 VAL n 3 71 ASN n 3 72 ARG n 3 73 HIS n 3 74 ASN n 3 75 ILE n 3 76 GLU n 3 77 SER n 3 78 ILE n 3 79 ASP n 3 80 SER n 3 81 LYS n 3 82 GLU n 3 83 ARG n 3 84 ILE n 3 85 VAL n 3 86 TYR n 3 87 PHE n 3 88 LYS n 3 89 ASN n 3 90 LYS n 3 91 GLU n 3 92 HIS n 3 93 CYS n 3 94 TYR n 3 95 ALA n 3 96 SER n 3 97 VAL n 3 98 ARG n 3 99 ASN n 3 100 VAL n 3 101 LYS n 3 102 LYS n 3 103 ILE n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene 'agrA, agr' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain DB _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET9a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'This sequence occurs naturally in Staphylococcus aureus' 2 1 sample ? ? ? ? ? 'This sequence occurs naturally in Staphylococcus aureus' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T B . n A 1 2 DT 2 2 2 DT T B . n A 1 3 DT 3 3 3 DT T B . n A 1 4 DA 4 4 4 DA A B . n A 1 5 DA 5 5 5 DA A B . n A 1 6 DC 6 6 6 DC C B . n A 1 7 DA 7 7 7 DA A B . n A 1 8 DG 8 8 8 DG G B . n A 1 9 DT 9 9 9 DT T B . n A 1 10 DT 10 10 10 DT T B . n A 1 11 DA 11 11 11 DA A B . n A 1 12 DA 12 12 12 DA A B . n A 1 13 DG 13 13 13 DG G B . n A 1 14 BRU 14 14 14 BRU BRU B . n A 1 15 DA 15 15 15 DA A B . n A 1 16 DT 16 16 16 DT T B . n B 2 1 DA 1 1 1 DA A C . n B 2 2 DA 2 2 2 DA A C . n B 2 3 BRU 3 3 3 BRU BRU C . n B 2 4 DA 4 4 4 DA A C . n B 2 5 DC 5 5 5 DC C C . n B 2 6 DT 6 6 6 DT T C . n B 2 7 DT 7 7 7 DT T C . n B 2 8 DA 8 8 8 DA A C . n B 2 9 DA 9 9 9 DA A C . n B 2 10 DC 10 10 10 DC C C . n B 2 11 DT 11 11 11 DT T C . n B 2 12 DG 12 12 12 DG G C . n B 2 13 DT 13 13 13 DT T C . n B 2 14 DT 14 14 14 DT T C . n B 2 15 DA 15 15 15 DA A C . n B 2 16 DA 16 16 16 DA A C . n C 3 1 MET 1 136 136 MET MET A . n C 3 2 ASP 2 137 137 ASP ASP A . n C 3 3 ASN 3 138 138 ASN ASN A . n C 3 4 SER 4 139 139 SER SER A . n C 3 5 VAL 5 140 140 VAL VAL A . n C 3 6 GLU 6 141 141 GLU GLU A . n C 3 7 THR 7 142 142 THR THR A . n C 3 8 ILE 8 143 143 ILE ILE A . n C 3 9 GLU 9 144 144 GLU GLU A . n C 3 10 LEU 10 145 145 LEU LEU A . n C 3 11 LYS 11 146 146 LYS LYS A . n C 3 12 ARG 12 147 147 ARG ARG A . n C 3 13 GLY 13 148 148 GLY GLY A . n C 3 14 SER 14 149 149 SER SER A . n C 3 15 ASN 15 150 150 ASN ASN A . n C 3 16 SER 16 151 151 SER SER A . n C 3 17 VAL 17 152 152 VAL VAL A . n C 3 18 TYR 18 153 153 TYR TYR A . n C 3 19 VAL 19 154 154 VAL VAL A . n C 3 20 GLN 20 155 155 GLN GLN A . n C 3 21 TYR 21 156 156 TYR TYR A . n C 3 22 ASP 22 157 157 ASP ASP A . n C 3 23 ASP 23 158 158 ASP ASP A . n C 3 24 ILE 24 159 159 ILE ILE A . n C 3 25 MET 25 160 160 MET MET A . n C 3 26 PHE 26 161 161 PHE PHE A . n C 3 27 PHE 27 162 162 PHE PHE A . n C 3 28 GLU 28 163 163 GLU GLU A . n C 3 29 SER 29 164 164 SER SER A . n C 3 30 SER 30 165 165 SER SER A . n C 3 31 THR 31 166 166 THR THR A . n C 3 32 LYS 32 167 167 LYS LYS A . n C 3 33 SER 33 168 168 SER SER A . n C 3 34 HIS 34 169 169 HIS HIS A . n C 3 35 ARG 35 170 170 ARG ARG A . n C 3 36 LEU 36 171 171 LEU LEU A . n C 3 37 ILE 37 172 172 ILE ILE A . n C 3 38 ALA 38 173 173 ALA ALA A . n C 3 39 HIS 39 174 174 HIS HIS A . n C 3 40 LEU 40 175 175 LEU LEU A . n C 3 41 ASP 41 176 176 ASP ASP A . n C 3 42 ASN 42 177 177 ASN ASN A . n C 3 43 ARG 43 178 178 ARG ARG A . n C 3 44 GLN 44 179 179 GLN GLN A . n C 3 45 ILE 45 180 180 ILE ILE A . n C 3 46 GLU 46 181 181 GLU GLU A . n C 3 47 PHE 47 182 182 PHE PHE A . n C 3 48 TYR 48 183 183 TYR TYR A . n C 3 49 GLY 49 184 184 GLY GLY A . n C 3 50 ASN 50 185 185 ASN ASN A . n C 3 51 LEU 51 186 186 LEU LEU A . n C 3 52 LYS 52 187 187 LYS LYS A . n C 3 53 GLU 53 188 188 GLU GLU A . n C 3 54 LEU 54 189 189 LEU LEU A . n C 3 55 SER 55 190 190 SER SER A . n C 3 56 GLN 56 191 191 GLN GLN A . n C 3 57 LEU 57 192 192 LEU LEU A . n C 3 58 ASP 58 193 193 ASP ASP A . n C 3 59 ASP 59 194 194 ASP ASP A . n C 3 60 ARG 60 195 195 ARG ARG A . n C 3 61 PHE 61 196 196 PHE PHE A . n C 3 62 PHE 62 197 197 PHE PHE A . n C 3 63 ARG 63 198 198 ARG ARG A . n C 3 64 CYS 64 199 199 CYS CYS A . n C 3 65 HIS 65 200 200 HIS HIS A . n C 3 66 ASN 66 201 201 ASN ASN A . n C 3 67 SER 67 202 202 SER SER A . n C 3 68 PHE 68 203 203 PHE PHE A . n C 3 69 VAL 69 204 204 VAL VAL A . n C 3 70 VAL 70 205 205 VAL VAL A . n C 3 71 ASN 71 206 206 ASN ASN A . n C 3 72 ARG 72 207 207 ARG ARG A . n C 3 73 HIS 73 208 208 HIS HIS A . n C 3 74 ASN 74 209 209 ASN ASN A . n C 3 75 ILE 75 210 210 ILE ILE A . n C 3 76 GLU 76 211 211 GLU GLU A . n C 3 77 SER 77 212 212 SER SER A . n C 3 78 ILE 78 213 213 ILE ILE A . n C 3 79 ASP 79 214 214 ASP ASP A . n C 3 80 SER 80 215 215 SER SER A . n C 3 81 LYS 81 216 216 LYS LYS A . n C 3 82 GLU 82 217 217 GLU GLU A . n C 3 83 ARG 83 218 218 ARG ARG A . n C 3 84 ILE 84 219 219 ILE ILE A . n C 3 85 VAL 85 220 220 VAL VAL A . n C 3 86 TYR 86 221 221 TYR TYR A . n C 3 87 PHE 87 222 222 PHE PHE A . n C 3 88 LYS 88 223 223 LYS LYS A . n C 3 89 ASN 89 224 224 ASN ASN A . n C 3 90 LYS 90 225 225 LYS LYS A . n C 3 91 GLU 91 226 226 GLU GLU A . n C 3 92 HIS 92 227 227 HIS HIS A . n C 3 93 CYS 93 228 228 CYS CYS A . n C 3 94 TYR 94 229 229 TYR TYR A . n C 3 95 ALA 95 230 230 ALA ALA A . n C 3 96 SER 96 231 231 SER SER A . n C 3 97 VAL 97 232 232 VAL VAL A . n C 3 98 ARG 98 233 233 ARG ARG A . n C 3 99 ASN 99 234 234 ASN ASN A . n C 3 100 VAL 100 235 235 VAL VAL A . n C 3 101 LYS 101 236 236 LYS LYS A . n C 3 102 LYS 102 237 237 LYS LYS A . n C 3 103 ILE 103 238 238 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 1 1 MG MG A . E 4 MG 1 2 2 MG MG A . F 5 HOH 1 251 19 HOH HOH B . F 5 HOH 2 252 2 HOH HOH B . F 5 HOH 3 253 5 HOH HOH B . F 5 HOH 4 254 9 HOH HOH B . F 5 HOH 5 255 12 HOH HOH B . F 5 HOH 6 256 24 HOH HOH B . F 5 HOH 7 257 27 HOH HOH B . F 5 HOH 8 258 28 HOH HOH B . F 5 HOH 9 259 30 HOH HOH B . F 5 HOH 10 260 31 HOH HOH B . F 5 HOH 11 261 38 HOH HOH B . F 5 HOH 12 262 47 HOH HOH B . F 5 HOH 13 263 53 HOH HOH B . F 5 HOH 14 264 54 HOH HOH B . F 5 HOH 15 265 60 HOH HOH B . F 5 HOH 16 266 68 HOH HOH B . F 5 HOH 17 267 85 HOH HOH B . F 5 HOH 18 268 91 HOH HOH B . F 5 HOH 19 269 92 HOH HOH B . F 5 HOH 20 270 96 HOH HOH B . F 5 HOH 21 271 100 HOH HOH B . F 5 HOH 22 272 103 HOH HOH B . F 5 HOH 23 273 105 HOH HOH B . F 5 HOH 24 274 108 HOH HOH B . F 5 HOH 25 275 114 HOH HOH B . F 5 HOH 26 276 117 HOH HOH B . F 5 HOH 27 277 118 HOH HOH B . F 5 HOH 28 278 119 HOH HOH B . F 5 HOH 29 279 122 HOH HOH B . F 5 HOH 30 280 124 HOH HOH B . F 5 HOH 31 281 127 HOH HOH B . F 5 HOH 32 282 129 HOH HOH B . F 5 HOH 33 283 132 HOH HOH B . F 5 HOH 34 284 137 HOH HOH B . F 5 HOH 35 285 141 HOH HOH B . F 5 HOH 36 286 146 HOH HOH B . F 5 HOH 37 287 153 HOH HOH B . F 5 HOH 38 288 159 HOH HOH B . F 5 HOH 39 289 170 HOH HOH B . F 5 HOH 40 290 174 HOH HOH B . F 5 HOH 41 291 179 HOH HOH B . F 5 HOH 42 292 183 HOH HOH B . F 5 HOH 43 293 184 HOH HOH B . F 5 HOH 44 294 185 HOH HOH B . F 5 HOH 45 295 187 HOH HOH B . F 5 HOH 46 296 194 HOH HOH B . F 5 HOH 47 297 198 HOH HOH B . F 5 HOH 48 298 205 HOH HOH B . F 5 HOH 49 299 209 HOH HOH B . F 5 HOH 50 300 210 HOH HOH B . F 5 HOH 51 301 225 HOH HOH B . F 5 HOH 52 302 226 HOH HOH B . F 5 HOH 53 303 227 HOH HOH B . F 5 HOH 54 304 228 HOH HOH B . F 5 HOH 55 305 229 HOH HOH B . F 5 HOH 56 306 230 HOH HOH B . F 5 HOH 57 307 231 HOH HOH B . F 5 HOH 58 308 233 HOH HOH B . G 5 HOH 1 277 65 HOH HOH C . G 5 HOH 2 278 214 HOH HOH C . G 5 HOH 3 279 1 HOH HOH C . G 5 HOH 4 280 15 HOH HOH C . G 5 HOH 5 281 25 HOH HOH C . G 5 HOH 6 282 32 HOH HOH C . G 5 HOH 7 283 51 HOH HOH C . G 5 HOH 8 284 52 HOH HOH C . G 5 HOH 9 285 56 HOH HOH C . G 5 HOH 10 286 59 HOH HOH C . G 5 HOH 11 287 62 HOH HOH C . G 5 HOH 12 288 67 HOH HOH C . G 5 HOH 13 289 76 HOH HOH C . G 5 HOH 14 290 78 HOH HOH C . G 5 HOH 15 291 83 HOH HOH C . G 5 HOH 16 292 86 HOH HOH C . G 5 HOH 17 293 87 HOH HOH C . G 5 HOH 18 294 88 HOH HOH C . G 5 HOH 19 295 90 HOH HOH C . G 5 HOH 20 296 98 HOH HOH C . G 5 HOH 21 297 101 HOH HOH C . G 5 HOH 22 298 104 HOH HOH C . G 5 HOH 23 299 110 HOH HOH C . G 5 HOH 24 300 123 HOH HOH C . G 5 HOH 25 301 125 HOH HOH C . G 5 HOH 26 302 126 HOH HOH C . G 5 HOH 27 303 133 HOH HOH C . G 5 HOH 28 304 134 HOH HOH C . G 5 HOH 29 305 135 HOH HOH C . G 5 HOH 30 306 142 HOH HOH C . G 5 HOH 31 307 143 HOH HOH C . G 5 HOH 32 308 148 HOH HOH C . G 5 HOH 33 309 150 HOH HOH C . G 5 HOH 34 310 154 HOH HOH C . G 5 HOH 35 311 162 HOH HOH C . G 5 HOH 36 312 166 HOH HOH C . G 5 HOH 37 313 175 HOH HOH C . G 5 HOH 38 314 177 HOH HOH C . G 5 HOH 39 315 181 HOH HOH C . G 5 HOH 40 316 186 HOH HOH C . G 5 HOH 41 317 219 HOH HOH C . G 5 HOH 42 318 223 HOH HOH C . G 5 HOH 43 319 234 HOH HOH C . G 5 HOH 44 320 235 HOH HOH C . G 5 HOH 45 321 236 HOH HOH C . G 5 HOH 46 322 242 HOH HOH C . H 5 HOH 1 239 3 HOH HOH A . H 5 HOH 2 240 4 HOH HOH A . H 5 HOH 3 241 6 HOH HOH A . H 5 HOH 4 242 7 HOH HOH A . H 5 HOH 5 243 8 HOH HOH A . H 5 HOH 6 244 10 HOH HOH A . H 5 HOH 7 245 11 HOH HOH A . H 5 HOH 8 246 13 HOH HOH A . H 5 HOH 9 247 14 HOH HOH A . H 5 HOH 10 248 16 HOH HOH A . H 5 HOH 11 249 17 HOH HOH A . H 5 HOH 12 250 18 HOH HOH A . H 5 HOH 13 251 20 HOH HOH A . H 5 HOH 14 252 21 HOH HOH A . H 5 HOH 15 253 22 HOH HOH A . H 5 HOH 16 254 23 HOH HOH A . H 5 HOH 17 255 26 HOH HOH A . H 5 HOH 18 256 29 HOH HOH A . H 5 HOH 19 257 33 HOH HOH A . H 5 HOH 20 258 34 HOH HOH A . H 5 HOH 21 259 35 HOH HOH A . H 5 HOH 22 260 36 HOH HOH A . H 5 HOH 23 261 37 HOH HOH A . H 5 HOH 24 262 39 HOH HOH A . H 5 HOH 25 263 40 HOH HOH A . H 5 HOH 26 264 41 HOH HOH A . H 5 HOH 27 265 43 HOH HOH A . H 5 HOH 28 266 44 HOH HOH A . H 5 HOH 29 267 45 HOH HOH A . H 5 HOH 30 268 46 HOH HOH A . H 5 HOH 31 269 48 HOH HOH A . H 5 HOH 32 270 49 HOH HOH A . H 5 HOH 33 271 50 HOH HOH A . H 5 HOH 34 272 55 HOH HOH A . H 5 HOH 35 273 57 HOH HOH A . H 5 HOH 36 274 58 HOH HOH A . H 5 HOH 37 275 64 HOH HOH A . H 5 HOH 38 276 66 HOH HOH A . H 5 HOH 39 277 69 HOH HOH A . H 5 HOH 40 278 70 HOH HOH A . H 5 HOH 41 279 71 HOH HOH A . H 5 HOH 42 280 72 HOH HOH A . H 5 HOH 43 281 73 HOH HOH A . H 5 HOH 44 282 74 HOH HOH A . H 5 HOH 45 283 75 HOH HOH A . H 5 HOH 46 284 77 HOH HOH A . H 5 HOH 47 285 79 HOH HOH A . H 5 HOH 48 286 80 HOH HOH A . H 5 HOH 49 287 81 HOH HOH A . H 5 HOH 50 288 82 HOH HOH A . H 5 HOH 51 289 84 HOH HOH A . H 5 HOH 52 290 89 HOH HOH A . H 5 HOH 53 291 93 HOH HOH A . H 5 HOH 54 292 94 HOH HOH A . H 5 HOH 55 293 95 HOH HOH A . H 5 HOH 56 294 97 HOH HOH A . H 5 HOH 57 295 99 HOH HOH A . H 5 HOH 58 296 102 HOH HOH A . H 5 HOH 59 297 106 HOH HOH A . H 5 HOH 60 298 107 HOH HOH A . H 5 HOH 61 299 109 HOH HOH A . H 5 HOH 62 300 111 HOH HOH A . H 5 HOH 63 301 112 HOH HOH A . H 5 HOH 64 302 113 HOH HOH A . H 5 HOH 65 303 115 HOH HOH A . H 5 HOH 66 304 116 HOH HOH A . H 5 HOH 67 305 120 HOH HOH A . H 5 HOH 68 306 121 HOH HOH A . H 5 HOH 69 307 128 HOH HOH A . H 5 HOH 70 308 130 HOH HOH A . H 5 HOH 71 309 136 HOH HOH A . H 5 HOH 72 310 138 HOH HOH A . H 5 HOH 73 311 139 HOH HOH A . H 5 HOH 74 312 140 HOH HOH A . H 5 HOH 75 313 144 HOH HOH A . H 5 HOH 76 314 145 HOH HOH A . H 5 HOH 77 315 147 HOH HOH A . H 5 HOH 78 316 149 HOH HOH A . H 5 HOH 79 317 151 HOH HOH A . H 5 HOH 80 318 156 HOH HOH A . H 5 HOH 81 319 157 HOH HOH A . H 5 HOH 82 320 158 HOH HOH A . H 5 HOH 83 321 164 HOH HOH A . H 5 HOH 84 322 165 HOH HOH A . H 5 HOH 85 323 167 HOH HOH A . H 5 HOH 86 324 168 HOH HOH A . H 5 HOH 87 325 169 HOH HOH A . H 5 HOH 88 326 171 HOH HOH A . H 5 HOH 89 327 172 HOH HOH A . H 5 HOH 90 328 173 HOH HOH A . H 5 HOH 91 329 178 HOH HOH A . H 5 HOH 92 330 180 HOH HOH A . H 5 HOH 93 331 182 HOH HOH A . H 5 HOH 94 332 188 HOH HOH A . H 5 HOH 95 333 189 HOH HOH A . H 5 HOH 96 334 191 HOH HOH A . H 5 HOH 97 335 192 HOH HOH A . H 5 HOH 98 336 193 HOH HOH A . H 5 HOH 99 337 195 HOH HOH A . H 5 HOH 100 338 202 HOH HOH A . H 5 HOH 101 339 206 HOH HOH A . H 5 HOH 102 340 207 HOH HOH A . H 5 HOH 103 341 208 HOH HOH A . H 5 HOH 104 342 211 HOH HOH A . H 5 HOH 105 343 212 HOH HOH A . H 5 HOH 106 344 213 HOH HOH A . H 5 HOH 107 345 215 HOH HOH A . H 5 HOH 108 346 216 HOH HOH A . H 5 HOH 109 347 217 HOH HOH A . H 5 HOH 110 348 218 HOH HOH A . H 5 HOH 111 349 220 HOH HOH A . H 5 HOH 112 350 221 HOH HOH A . H 5 HOH 113 351 222 HOH HOH A . H 5 HOH 114 352 224 HOH HOH A . H 5 HOH 115 353 232 HOH HOH A . H 5 HOH 116 354 237 HOH HOH A . H 5 HOH 117 355 238 HOH HOH A . H 5 HOH 118 356 240 HOH HOH A . H 5 HOH 119 357 241 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 ADSC 'data collection' Quantum ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SHARP phasing . ? 5 # _cell.entry_id 3BS1 _cell.length_a 47.938 _cell.length_b 47.938 _cell.length_c 100.112 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BS1 _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3BS1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.58 _exptl_crystal.density_percent_sol 52.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '40% PEG 400, 0.1M Bis-Tris, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 Bis-Tris ? ? ? 1 3 2 'PEG 400' ? ? ? 1 4 2 Bis-Tris ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-06-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9204 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9204 # _reflns.entry_id 3BS1 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 17.3 _reflns.number_all 29714 _reflns.number_obs 29714 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 18.4 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 97.3 _reflns_shell.Rmerge_I_obs 0.155 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.7 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3BS1 _refine.ls_number_reflns_obs 27747 _refine.ls_number_reflns_all 29714 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 17.3 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 98.35 _refine.ls_R_factor_obs 0.19659 _refine.ls_R_factor_all 0.1961 _refine.ls_R_factor_R_work 0.19534 _refine.ls_R_factor_R_free 0.22066 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1485 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.B_iso_mean 19.945 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.093 _refine.pdbx_overall_ESU_R_Free 0.091 _refine.overall_SU_ML 0.056 _refine.overall_SU_B 1.717 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 872 _refine_hist.pdbx_number_atoms_nucleic_acid 650 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 223 _refine_hist.number_atoms_total 1747 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 17.3 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.021 ? 1617 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.381 2.445 ? 2313 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.998 5.000 ? 104 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.564 23.654 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.461 15.000 ? 169 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.397 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.073 0.200 ? 250 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1019 'X-RAY DIFFRACTION' ? r_nbd_refined 0.187 0.200 ? 583 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.302 0.200 ? 1021 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.374 0.200 ? 189 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.023 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.222 0.200 ? 54 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.155 0.200 ? 34 'X-RAY DIFFRACTION' ? r_mcbond_it 0.768 1.500 ? 532 'X-RAY DIFFRACTION' ? r_mcangle_it 1.216 2.000 ? 839 'X-RAY DIFFRACTION' ? r_scbond_it 1.364 3.000 ? 1440 'X-RAY DIFFRACTION' ? r_scangle_it 1.996 4.500 ? 1473 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.number_reflns_R_work 1983 _refine_ls_shell.R_factor_R_work 0.213 _refine_ls_shell.percent_reflns_obs 97.26 _refine_ls_shell.R_factor_R_free 0.256 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 112 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3BS1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3BS1 _struct.title 'Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with a Novel Mode of Binding' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BS1 _struct_keywords.pdbx_keywords 'transcription regulator' _struct_keywords.text ;LytTR, AgrA, response regulator, DNA binding domain, Activator, Cytoplasm, DNA-binding, Phosphoprotein, Transcription, Transcription regulation, Two-component regulatory system, transcription regulator ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 3BS1 3BS1 1 TTTAACAGTTAAGUAT 1 ? 2 PDB 3BS1 3BS1 2 AAUACTTAACTGTTAA 1 ? 3 UNP AGRA_STAAU P0A0I7 3 ;DNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSK ERIVYFKNKEHCYASVRNVKKI ; 137 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BS1 B 1 ? 16 ? 3BS1 1 ? 16 ? 1 16 2 2 3BS1 C 1 ? 16 ? 3BS1 1 ? 16 ? 1 16 3 3 3BS1 A 2 ? 103 ? P0A0I7 137 ? 238 ? 137 238 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 3BS1 _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0A0I7 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 136 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4550 ? 1 MORE -12.5 ? 1 'SSA (A^2)' 10570 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN C 50 ? ASP C 58 ? ASN A 185 ASP A 193 1 ? 9 HELX_P HELX_P2 2 ASN C 99 ? ILE C 103 ? ASN A 234 ILE A 238 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 13 "O3'" ? ? ? 1_555 A BRU 14 P ? ? B DG 13 B BRU 14 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale2 covale both ? A BRU 14 "O3'" ? ? ? 1_555 A DA 15 P ? ? B BRU 14 B DA 15 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale3 covale both ? B DA 2 "O3'" ? ? ? 1_555 B BRU 3 P ? ? C DA 2 C BRU 3 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale4 covale both ? B BRU 3 "O3'" ? ? ? 1_555 B DA 4 P ? ? C BRU 3 C DA 4 1_555 ? ? ? ? ? ? ? 1.606 ? ? metalc1 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 248 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc2 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 307 1_555 ? ? ? ? ? ? ? 2.140 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 321 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 345 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 346 1_555 ? ? ? ? ? ? ? 1.975 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1 A HOH 347 1_555 ? ? ? ? ? ? ? 1.961 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 C SER 55 O ? ? A MG 2 A SER 190 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 C PHE 61 O ? ? A MG 2 A PHE 196 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 2 A HOH 264 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 2 A HOH 314 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 2 A HOH 348 1_555 ? ? ? ? ? ? ? 2.338 ? ? hydrog1 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 16 N1 ? ? B DT 2 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 16 N6 ? ? B DT 2 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 15 N1 ? ? B DT 3 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 15 N6 ? ? B DT 3 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 14 N3 ? ? B DA 4 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 14 O4 ? ? B DA 4 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 13 N3 ? ? B DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 13 O4 ? ? B DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 12 N1 ? ? B DC 6 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 12 O6 ? ? B DC 6 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 12 N2 ? ? B DC 6 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 7 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 7 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 8 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 8 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 8 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 9 N1 ? ? B DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 9 N6 ? ? B DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 8 N1 ? ? B DT 10 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 8 N6 ? ? B DT 10 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 7 N3 ? ? B DA 11 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 7 O4 ? ? B DA 11 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 6 N3 ? ? B DA 12 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 6 O4 ? ? B DA 12 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 13 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 13 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 13 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A BRU 14 N3 ? ? ? 1_555 B DA 4 N1 ? ? B BRU 14 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A BRU 14 O4 ? ? ? 1_555 B DA 4 N6 ? ? B BRU 14 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B BRU 3 N3 ? ? B DA 15 C BRU 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B BRU 3 O4 ? ? B DA 15 C BRU 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 16 N3 ? ? ? 1_555 B DA 2 N1 ? ? B DT 16 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 16 O4 ? ? ? 1_555 B DA 2 N6 ? ? B DT 16 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? H HOH . ? A HOH 248 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 307 ? 1_555 85.9 ? 2 O ? H HOH . ? A HOH 248 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 321 ? 1_555 89.3 ? 3 O ? H HOH . ? A HOH 307 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 321 ? 1_555 174.9 ? 4 O ? H HOH . ? A HOH 248 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 345 ? 1_555 85.6 ? 5 O ? H HOH . ? A HOH 307 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 345 ? 1_555 92.0 ? 6 O ? H HOH . ? A HOH 321 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 345 ? 1_555 89.3 ? 7 O ? H HOH . ? A HOH 248 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 346 ? 1_555 174.7 ? 8 O ? H HOH . ? A HOH 307 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 346 ? 1_555 88.8 ? 9 O ? H HOH . ? A HOH 321 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 346 ? 1_555 96.0 ? 10 O ? H HOH . ? A HOH 345 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 346 ? 1_555 94.0 ? 11 O ? H HOH . ? A HOH 248 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 347 ? 1_555 84.9 ? 12 O ? H HOH . ? A HOH 307 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 347 ? 1_555 91.4 ? 13 O ? H HOH . ? A HOH 321 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 347 ? 1_555 86.5 ? 14 O ? H HOH . ? A HOH 345 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 347 ? 1_555 169.6 ? 15 O ? H HOH . ? A HOH 346 ? 1_555 MG ? D MG . ? A MG 1 ? 1_555 O ? H HOH . ? A HOH 347 ? 1_555 95.9 ? 16 O ? C SER 55 ? A SER 190 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? C PHE 61 ? A PHE 196 ? 1_555 91.6 ? 17 O ? C SER 55 ? A SER 190 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 264 ? 1_555 88.1 ? 18 O ? C PHE 61 ? A PHE 196 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 264 ? 1_555 168.5 ? 19 O ? C SER 55 ? A SER 190 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 314 ? 1_555 163.4 ? 20 O ? C PHE 61 ? A PHE 196 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 314 ? 1_555 88.6 ? 21 O ? H HOH . ? A HOH 264 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 314 ? 1_555 94.9 ? 22 O ? C SER 55 ? A SER 190 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 348 ? 1_555 92.6 ? 23 O ? C PHE 61 ? A PHE 196 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 348 ? 1_555 102.2 ? 24 O ? H HOH . ? A HOH 264 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 348 ? 1_555 89.4 ? 25 O ? H HOH . ? A HOH 314 ? 1_555 MG ? E MG . ? A MG 2 ? 1_555 O ? H HOH . ? A HOH 348 ? 1_555 71.2 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR C 7 ? ARG C 12 ? THR A 142 ARG A 147 A 2 ASN C 15 ? GLN C 20 ? ASN A 150 GLN A 155 B 1 GLN C 44 ? TYR C 48 ? GLN A 179 TYR A 183 B 2 ARG C 35 ? LEU C 40 ? ARG A 170 LEU A 175 B 3 ILE C 24 ? SER C 29 ? ILE A 159 SER A 164 B 4 PHE C 68 ? ASN C 71 ? PHE A 203 ASN A 206 B 5 PHE C 61 ? HIS C 65 ? PHE A 196 HIS A 200 C 1 ILE C 75 ? ASP C 79 ? ILE A 210 ASP A 214 C 2 ILE C 84 ? PHE C 87 ? ILE A 219 PHE A 222 C 3 HIS C 92 ? TYR C 94 ? HIS A 227 TYR A 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG C 12 ? N ARG A 147 O ASN C 15 ? O ASN A 150 B 1 2 O ILE C 45 ? O ILE A 180 N ALA C 38 ? N ALA A 173 B 2 3 O HIS C 39 ? O HIS A 174 N MET C 25 ? N MET A 160 B 3 4 N PHE C 27 ? N PHE A 162 O VAL C 69 ? O VAL A 204 B 4 5 O VAL C 70 ? O VAL A 205 N PHE C 62 ? N PHE A 197 C 1 2 N GLU C 76 ? N GLU A 211 O TYR C 86 ? O TYR A 221 C 2 3 N VAL C 85 ? N VAL A 220 O CYS C 93 ? O CYS A 228 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1 ? 6 'BINDING SITE FOR RESIDUE MG A 1' AC2 Software A MG 2 ? 6 'BINDING SITE FOR RESIDUE MG A 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH H . ? HOH A 248 . ? 1_555 ? 2 AC1 6 HOH H . ? HOH A 307 . ? 1_555 ? 3 AC1 6 HOH H . ? HOH A 321 . ? 1_555 ? 4 AC1 6 HOH H . ? HOH A 345 . ? 1_555 ? 5 AC1 6 HOH H . ? HOH A 346 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 347 . ? 1_555 ? 7 AC2 6 SER C 55 ? SER A 190 . ? 1_555 ? 8 AC2 6 ASP C 58 ? ASP A 193 . ? 1_555 ? 9 AC2 6 PHE C 61 ? PHE A 196 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH A 264 . ? 1_555 ? 11 AC2 6 HOH H . ? HOH A 314 . ? 1_555 ? 12 AC2 6 HOH H . ? HOH A 348 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 146 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 268 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 110.35 108.30 2.05 0.30 N 2 1 "O4'" B DT 2 ? ? "C1'" B DT 2 ? ? N1 B DT 2 ? ? 110.30 108.30 2.00 0.30 N 3 1 "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 112.98 108.30 4.68 0.30 N 4 1 "O4'" B DA 5 ? ? "C1'" B DA 5 ? ? N9 B DA 5 ? ? 103.75 108.00 -4.25 0.70 N 5 1 "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 103.52 108.00 -4.48 0.70 N 6 1 "O4'" B DA 7 ? ? "C1'" B DA 7 ? ? N9 B DA 7 ? ? 111.65 108.30 3.35 0.30 N 7 1 "O4'" B DA 12 ? ? "C1'" B DA 12 ? ? N9 B DA 12 ? ? 110.32 108.30 2.02 0.30 N 8 1 "O4'" C DT 7 ? ? "C1'" C DT 7 ? ? N1 C DT 7 ? ? 110.17 108.30 1.87 0.30 N 9 1 "O4'" C DA 9 ? ? "C1'" C DA 9 ? ? N9 C DA 9 ? ? 114.30 108.30 6.00 0.30 N 10 1 "O4'" C DA 16 ? ? "C1'" C DA 16 ? ? N9 C DA 16 ? ? 110.16 108.30 1.86 0.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 225 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 84.56 _pdbx_validate_torsion.psi -4.33 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 14 B BRU 14 ? DU ? 2 B BRU 3 C BRU 3 ? DU ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 DA OP3 O N N 121 DA P P N N 122 DA OP1 O N N 123 DA OP2 O N N 124 DA "O5'" O N N 125 DA "C5'" C N N 126 DA "C4'" C N R 127 DA "O4'" O N N 128 DA "C3'" C N S 129 DA "O3'" O N N 130 DA "C2'" C N N 131 DA "C1'" C N R 132 DA N9 N Y N 133 DA C8 C Y N 134 DA N7 N Y N 135 DA C5 C Y N 136 DA C6 C Y N 137 DA N6 N N N 138 DA N1 N Y N 139 DA C2 C Y N 140 DA N3 N Y N 141 DA C4 C Y N 142 DA HOP3 H N N 143 DA HOP2 H N N 144 DA "H5'" H N N 145 DA "H5''" H N N 146 DA "H4'" H N N 147 DA "H3'" H N N 148 DA "HO3'" H N N 149 DA "H2'" H N N 150 DA "H2''" H N N 151 DA "H1'" H N N 152 DA H8 H N N 153 DA H61 H N N 154 DA H62 H N N 155 DA H2 H N N 156 DC OP3 O N N 157 DC P P N N 158 DC OP1 O N N 159 DC OP2 O N N 160 DC "O5'" O N N 161 DC "C5'" C N N 162 DC "C4'" C N R 163 DC "O4'" O N N 164 DC "C3'" C N S 165 DC "O3'" O N N 166 DC "C2'" C N N 167 DC "C1'" C N R 168 DC N1 N N N 169 DC C2 C N N 170 DC O2 O N N 171 DC N3 N N N 172 DC C4 C N N 173 DC N4 N N N 174 DC C5 C N N 175 DC C6 C N N 176 DC HOP3 H N N 177 DC HOP2 H N N 178 DC "H5'" H N N 179 DC "H5''" H N N 180 DC "H4'" H N N 181 DC "H3'" H N N 182 DC "HO3'" H N N 183 DC "H2'" H N N 184 DC "H2''" H N N 185 DC "H1'" H N N 186 DC H41 H N N 187 DC H42 H N N 188 DC H5 H N N 189 DC H6 H N N 190 DG OP3 O N N 191 DG P P N N 192 DG OP1 O N N 193 DG OP2 O N N 194 DG "O5'" O N N 195 DG "C5'" C N N 196 DG "C4'" C N R 197 DG "O4'" O N N 198 DG "C3'" C N S 199 DG "O3'" O N N 200 DG "C2'" C N N 201 DG "C1'" C N R 202 DG N9 N Y N 203 DG C8 C Y N 204 DG N7 N Y N 205 DG C5 C Y N 206 DG C6 C N N 207 DG O6 O N N 208 DG N1 N N N 209 DG C2 C N N 210 DG N2 N N N 211 DG N3 N N N 212 DG C4 C Y N 213 DG HOP3 H N N 214 DG HOP2 H N N 215 DG "H5'" H N N 216 DG "H5''" H N N 217 DG "H4'" H N N 218 DG "H3'" H N N 219 DG "HO3'" H N N 220 DG "H2'" H N N 221 DG "H2''" H N N 222 DG "H1'" H N N 223 DG H8 H N N 224 DG H1 H N N 225 DG H21 H N N 226 DG H22 H N N 227 DT OP3 O N N 228 DT P P N N 229 DT OP1 O N N 230 DT OP2 O N N 231 DT "O5'" O N N 232 DT "C5'" C N N 233 DT "C4'" C N R 234 DT "O4'" O N N 235 DT "C3'" C N S 236 DT "O3'" O N N 237 DT "C2'" C N N 238 DT "C1'" C N R 239 DT N1 N N N 240 DT C2 C N N 241 DT O2 O N N 242 DT N3 N N N 243 DT C4 C N N 244 DT O4 O N N 245 DT C5 C N N 246 DT C7 C N N 247 DT C6 C N N 248 DT HOP3 H N N 249 DT HOP2 H N N 250 DT "H5'" H N N 251 DT "H5''" H N N 252 DT "H4'" H N N 253 DT "H3'" H N N 254 DT "HO3'" H N N 255 DT "H2'" H N N 256 DT "H2''" H N N 257 DT "H1'" H N N 258 DT H3 H N N 259 DT H71 H N N 260 DT H72 H N N 261 DT H73 H N N 262 DT H6 H N N 263 GLN N N N N 264 GLN CA C N S 265 GLN C C N N 266 GLN O O N N 267 GLN CB C N N 268 GLN CG C N N 269 GLN CD C N N 270 GLN OE1 O N N 271 GLN NE2 N N N 272 GLN OXT O N N 273 GLN H H N N 274 GLN H2 H N N 275 GLN HA H N N 276 GLN HB2 H N N 277 GLN HB3 H N N 278 GLN HG2 H N N 279 GLN HG3 H N N 280 GLN HE21 H N N 281 GLN HE22 H N N 282 GLN HXT H N N 283 GLU N N N N 284 GLU CA C N S 285 GLU C C N N 286 GLU O O N N 287 GLU CB C N N 288 GLU CG C N N 289 GLU CD C N N 290 GLU OE1 O N N 291 GLU OE2 O N N 292 GLU OXT O N N 293 GLU H H N N 294 GLU H2 H N N 295 GLU HA H N N 296 GLU HB2 H N N 297 GLU HB3 H N N 298 GLU HG2 H N N 299 GLU HG3 H N N 300 GLU HE2 H N N 301 GLU HXT H N N 302 GLY N N N N 303 GLY CA C N N 304 GLY C C N N 305 GLY O O N N 306 GLY OXT O N N 307 GLY H H N N 308 GLY H2 H N N 309 GLY HA2 H N N 310 GLY HA3 H N N 311 GLY HXT H N N 312 HIS N N N N 313 HIS CA C N S 314 HIS C C N N 315 HIS O O N N 316 HIS CB C N N 317 HIS CG C Y N 318 HIS ND1 N Y N 319 HIS CD2 C Y N 320 HIS CE1 C Y N 321 HIS NE2 N Y N 322 HIS OXT O N N 323 HIS H H N N 324 HIS H2 H N N 325 HIS HA H N N 326 HIS HB2 H N N 327 HIS HB3 H N N 328 HIS HD1 H N N 329 HIS HD2 H N N 330 HIS HE1 H N N 331 HIS HE2 H N N 332 HIS HXT H N N 333 HOH O O N N 334 HOH H1 H N N 335 HOH H2 H N N 336 ILE N N N N 337 ILE CA C N S 338 ILE C C N N 339 ILE O O N N 340 ILE CB C N S 341 ILE CG1 C N N 342 ILE CG2 C N N 343 ILE CD1 C N N 344 ILE OXT O N N 345 ILE H H N N 346 ILE H2 H N N 347 ILE HA H N N 348 ILE HB H N N 349 ILE HG12 H N N 350 ILE HG13 H N N 351 ILE HG21 H N N 352 ILE HG22 H N N 353 ILE HG23 H N N 354 ILE HD11 H N N 355 ILE HD12 H N N 356 ILE HD13 H N N 357 ILE HXT H N N 358 LEU N N N N 359 LEU CA C N S 360 LEU C C N N 361 LEU O O N N 362 LEU CB C N N 363 LEU CG C N N 364 LEU CD1 C N N 365 LEU CD2 C N N 366 LEU OXT O N N 367 LEU H H N N 368 LEU H2 H N N 369 LEU HA H N N 370 LEU HB2 H N N 371 LEU HB3 H N N 372 LEU HG H N N 373 LEU HD11 H N N 374 LEU HD12 H N N 375 LEU HD13 H N N 376 LEU HD21 H N N 377 LEU HD22 H N N 378 LEU HD23 H N N 379 LEU HXT H N N 380 LYS N N N N 381 LYS CA C N S 382 LYS C C N N 383 LYS O O N N 384 LYS CB C N N 385 LYS CG C N N 386 LYS CD C N N 387 LYS CE C N N 388 LYS NZ N N N 389 LYS OXT O N N 390 LYS H H N N 391 LYS H2 H N N 392 LYS HA H N N 393 LYS HB2 H N N 394 LYS HB3 H N N 395 LYS HG2 H N N 396 LYS HG3 H N N 397 LYS HD2 H N N 398 LYS HD3 H N N 399 LYS HE2 H N N 400 LYS HE3 H N N 401 LYS HZ1 H N N 402 LYS HZ2 H N N 403 LYS HZ3 H N N 404 LYS HXT H N N 405 MET N N N N 406 MET CA C N S 407 MET C C N N 408 MET O O N N 409 MET CB C N N 410 MET CG C N N 411 MET SD S N N 412 MET CE C N N 413 MET OXT O N N 414 MET H H N N 415 MET H2 H N N 416 MET HA H N N 417 MET HB2 H N N 418 MET HB3 H N N 419 MET HG2 H N N 420 MET HG3 H N N 421 MET HE1 H N N 422 MET HE2 H N N 423 MET HE3 H N N 424 MET HXT H N N 425 MG MG MG N N 426 PHE N N N N 427 PHE CA C N S 428 PHE C C N N 429 PHE O O N N 430 PHE CB C N N 431 PHE CG C Y N 432 PHE CD1 C Y N 433 PHE CD2 C Y N 434 PHE CE1 C Y N 435 PHE CE2 C Y N 436 PHE CZ C Y N 437 PHE OXT O N N 438 PHE H H N N 439 PHE H2 H N N 440 PHE HA H N N 441 PHE HB2 H N N 442 PHE HB3 H N N 443 PHE HD1 H N N 444 PHE HD2 H N N 445 PHE HE1 H N N 446 PHE HE2 H N N 447 PHE HZ H N N 448 PHE HXT H N N 449 SER N N N N 450 SER CA C N S 451 SER C C N N 452 SER O O N N 453 SER CB C N N 454 SER OG O N N 455 SER OXT O N N 456 SER H H N N 457 SER H2 H N N 458 SER HA H N N 459 SER HB2 H N N 460 SER HB3 H N N 461 SER HG H N N 462 SER HXT H N N 463 THR N N N N 464 THR CA C N S 465 THR C C N N 466 THR O O N N 467 THR CB C N R 468 THR OG1 O N N 469 THR CG2 C N N 470 THR OXT O N N 471 THR H H N N 472 THR H2 H N N 473 THR HA H N N 474 THR HB H N N 475 THR HG1 H N N 476 THR HG21 H N N 477 THR HG22 H N N 478 THR HG23 H N N 479 THR HXT H N N 480 TYR N N N N 481 TYR CA C N S 482 TYR C C N N 483 TYR O O N N 484 TYR CB C N N 485 TYR CG C Y N 486 TYR CD1 C Y N 487 TYR CD2 C Y N 488 TYR CE1 C Y N 489 TYR CE2 C Y N 490 TYR CZ C Y N 491 TYR OH O N N 492 TYR OXT O N N 493 TYR H H N N 494 TYR H2 H N N 495 TYR HA H N N 496 TYR HB2 H N N 497 TYR HB3 H N N 498 TYR HD1 H N N 499 TYR HD2 H N N 500 TYR HE1 H N N 501 TYR HE2 H N N 502 TYR HH H N N 503 TYR HXT H N N 504 VAL N N N N 505 VAL CA C N S 506 VAL C C N N 507 VAL O O N N 508 VAL CB C N N 509 VAL CG1 C N N 510 VAL CG2 C N N 511 VAL OXT O N N 512 VAL H H N N 513 VAL H2 H N N 514 VAL HA H N N 515 VAL HB H N N 516 VAL HG11 H N N 517 VAL HG12 H N N 518 VAL HG13 H N N 519 VAL HG21 H N N 520 VAL HG22 H N N 521 VAL HG23 H N N 522 VAL HXT H N N 523 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DA OP3 P sing N N 117 DA OP3 HOP3 sing N N 118 DA P OP1 doub N N 119 DA P OP2 sing N N 120 DA P "O5'" sing N N 121 DA OP2 HOP2 sing N N 122 DA "O5'" "C5'" sing N N 123 DA "C5'" "C4'" sing N N 124 DA "C5'" "H5'" sing N N 125 DA "C5'" "H5''" sing N N 126 DA "C4'" "O4'" sing N N 127 DA "C4'" "C3'" sing N N 128 DA "C4'" "H4'" sing N N 129 DA "O4'" "C1'" sing N N 130 DA "C3'" "O3'" sing N N 131 DA "C3'" "C2'" sing N N 132 DA "C3'" "H3'" sing N N 133 DA "O3'" "HO3'" sing N N 134 DA "C2'" "C1'" sing N N 135 DA "C2'" "H2'" sing N N 136 DA "C2'" "H2''" sing N N 137 DA "C1'" N9 sing N N 138 DA "C1'" "H1'" sing N N 139 DA N9 C8 sing Y N 140 DA N9 C4 sing Y N 141 DA C8 N7 doub Y N 142 DA C8 H8 sing N N 143 DA N7 C5 sing Y N 144 DA C5 C6 sing Y N 145 DA C5 C4 doub Y N 146 DA C6 N6 sing N N 147 DA C6 N1 doub Y N 148 DA N6 H61 sing N N 149 DA N6 H62 sing N N 150 DA N1 C2 sing Y N 151 DA C2 N3 doub Y N 152 DA C2 H2 sing N N 153 DA N3 C4 sing Y N 154 DC OP3 P sing N N 155 DC OP3 HOP3 sing N N 156 DC P OP1 doub N N 157 DC P OP2 sing N N 158 DC P "O5'" sing N N 159 DC OP2 HOP2 sing N N 160 DC "O5'" "C5'" sing N N 161 DC "C5'" "C4'" sing N N 162 DC "C5'" "H5'" sing N N 163 DC "C5'" "H5''" sing N N 164 DC "C4'" "O4'" sing N N 165 DC "C4'" "C3'" sing N N 166 DC "C4'" "H4'" sing N N 167 DC "O4'" "C1'" sing N N 168 DC "C3'" "O3'" sing N N 169 DC "C3'" "C2'" sing N N 170 DC "C3'" "H3'" sing N N 171 DC "O3'" "HO3'" sing N N 172 DC "C2'" "C1'" sing N N 173 DC "C2'" "H2'" sing N N 174 DC "C2'" "H2''" sing N N 175 DC "C1'" N1 sing N N 176 DC "C1'" "H1'" sing N N 177 DC N1 C2 sing N N 178 DC N1 C6 sing N N 179 DC C2 O2 doub N N 180 DC C2 N3 sing N N 181 DC N3 C4 doub N N 182 DC C4 N4 sing N N 183 DC C4 C5 sing N N 184 DC N4 H41 sing N N 185 DC N4 H42 sing N N 186 DC C5 C6 doub N N 187 DC C5 H5 sing N N 188 DC C6 H6 sing N N 189 DG OP3 P sing N N 190 DG OP3 HOP3 sing N N 191 DG P OP1 doub N N 192 DG P OP2 sing N N 193 DG P "O5'" sing N N 194 DG OP2 HOP2 sing N N 195 DG "O5'" "C5'" sing N N 196 DG "C5'" "C4'" sing N N 197 DG "C5'" "H5'" sing N N 198 DG "C5'" "H5''" sing N N 199 DG "C4'" "O4'" sing N N 200 DG "C4'" "C3'" sing N N 201 DG "C4'" "H4'" sing N N 202 DG "O4'" "C1'" sing N N 203 DG "C3'" "O3'" sing N N 204 DG "C3'" "C2'" sing N N 205 DG "C3'" "H3'" sing N N 206 DG "O3'" "HO3'" sing N N 207 DG "C2'" "C1'" sing N N 208 DG "C2'" "H2'" sing N N 209 DG "C2'" "H2''" sing N N 210 DG "C1'" N9 sing N N 211 DG "C1'" "H1'" sing N N 212 DG N9 C8 sing Y N 213 DG N9 C4 sing Y N 214 DG C8 N7 doub Y N 215 DG C8 H8 sing N N 216 DG N7 C5 sing Y N 217 DG C5 C6 sing N N 218 DG C5 C4 doub Y N 219 DG C6 O6 doub N N 220 DG C6 N1 sing N N 221 DG N1 C2 sing N N 222 DG N1 H1 sing N N 223 DG C2 N2 sing N N 224 DG C2 N3 doub N N 225 DG N2 H21 sing N N 226 DG N2 H22 sing N N 227 DG N3 C4 sing N N 228 DT OP3 P sing N N 229 DT OP3 HOP3 sing N N 230 DT P OP1 doub N N 231 DT P OP2 sing N N 232 DT P "O5'" sing N N 233 DT OP2 HOP2 sing N N 234 DT "O5'" "C5'" sing N N 235 DT "C5'" "C4'" sing N N 236 DT "C5'" "H5'" sing N N 237 DT "C5'" "H5''" sing N N 238 DT "C4'" "O4'" sing N N 239 DT "C4'" "C3'" sing N N 240 DT "C4'" "H4'" sing N N 241 DT "O4'" "C1'" sing N N 242 DT "C3'" "O3'" sing N N 243 DT "C3'" "C2'" sing N N 244 DT "C3'" "H3'" sing N N 245 DT "O3'" "HO3'" sing N N 246 DT "C2'" "C1'" sing N N 247 DT "C2'" "H2'" sing N N 248 DT "C2'" "H2''" sing N N 249 DT "C1'" N1 sing N N 250 DT "C1'" "H1'" sing N N 251 DT N1 C2 sing N N 252 DT N1 C6 sing N N 253 DT C2 O2 doub N N 254 DT C2 N3 sing N N 255 DT N3 C4 sing N N 256 DT N3 H3 sing N N 257 DT C4 O4 doub N N 258 DT C4 C5 sing N N 259 DT C5 C7 sing N N 260 DT C5 C6 doub N N 261 DT C7 H71 sing N N 262 DT C7 H72 sing N N 263 DT C7 H73 sing N N 264 DT C6 H6 sing N N 265 GLN N CA sing N N 266 GLN N H sing N N 267 GLN N H2 sing N N 268 GLN CA C sing N N 269 GLN CA CB sing N N 270 GLN CA HA sing N N 271 GLN C O doub N N 272 GLN C OXT sing N N 273 GLN CB CG sing N N 274 GLN CB HB2 sing N N 275 GLN CB HB3 sing N N 276 GLN CG CD sing N N 277 GLN CG HG2 sing N N 278 GLN CG HG3 sing N N 279 GLN CD OE1 doub N N 280 GLN CD NE2 sing N N 281 GLN NE2 HE21 sing N N 282 GLN NE2 HE22 sing N N 283 GLN OXT HXT sing N N 284 GLU N CA sing N N 285 GLU N H sing N N 286 GLU N H2 sing N N 287 GLU CA C sing N N 288 GLU CA CB sing N N 289 GLU CA HA sing N N 290 GLU C O doub N N 291 GLU C OXT sing N N 292 GLU CB CG sing N N 293 GLU CB HB2 sing N N 294 GLU CB HB3 sing N N 295 GLU CG CD sing N N 296 GLU CG HG2 sing N N 297 GLU CG HG3 sing N N 298 GLU CD OE1 doub N N 299 GLU CD OE2 sing N N 300 GLU OE2 HE2 sing N N 301 GLU OXT HXT sing N N 302 GLY N CA sing N N 303 GLY N H sing N N 304 GLY N H2 sing N N 305 GLY CA C sing N N 306 GLY CA HA2 sing N N 307 GLY CA HA3 sing N N 308 GLY C O doub N N 309 GLY C OXT sing N N 310 GLY OXT HXT sing N N 311 HIS N CA sing N N 312 HIS N H sing N N 313 HIS N H2 sing N N 314 HIS CA C sing N N 315 HIS CA CB sing N N 316 HIS CA HA sing N N 317 HIS C O doub N N 318 HIS C OXT sing N N 319 HIS CB CG sing N N 320 HIS CB HB2 sing N N 321 HIS CB HB3 sing N N 322 HIS CG ND1 sing Y N 323 HIS CG CD2 doub Y N 324 HIS ND1 CE1 doub Y N 325 HIS ND1 HD1 sing N N 326 HIS CD2 NE2 sing Y N 327 HIS CD2 HD2 sing N N 328 HIS CE1 NE2 sing Y N 329 HIS CE1 HE1 sing N N 330 HIS NE2 HE2 sing N N 331 HIS OXT HXT sing N N 332 HOH O H1 sing N N 333 HOH O H2 sing N N 334 ILE N CA sing N N 335 ILE N H sing N N 336 ILE N H2 sing N N 337 ILE CA C sing N N 338 ILE CA CB sing N N 339 ILE CA HA sing N N 340 ILE C O doub N N 341 ILE C OXT sing N N 342 ILE CB CG1 sing N N 343 ILE CB CG2 sing N N 344 ILE CB HB sing N N 345 ILE CG1 CD1 sing N N 346 ILE CG1 HG12 sing N N 347 ILE CG1 HG13 sing N N 348 ILE CG2 HG21 sing N N 349 ILE CG2 HG22 sing N N 350 ILE CG2 HG23 sing N N 351 ILE CD1 HD11 sing N N 352 ILE CD1 HD12 sing N N 353 ILE CD1 HD13 sing N N 354 ILE OXT HXT sing N N 355 LEU N CA sing N N 356 LEU N H sing N N 357 LEU N H2 sing N N 358 LEU CA C sing N N 359 LEU CA CB sing N N 360 LEU CA HA sing N N 361 LEU C O doub N N 362 LEU C OXT sing N N 363 LEU CB CG sing N N 364 LEU CB HB2 sing N N 365 LEU CB HB3 sing N N 366 LEU CG CD1 sing N N 367 LEU CG CD2 sing N N 368 LEU CG HG sing N N 369 LEU CD1 HD11 sing N N 370 LEU CD1 HD12 sing N N 371 LEU CD1 HD13 sing N N 372 LEU CD2 HD21 sing N N 373 LEU CD2 HD22 sing N N 374 LEU CD2 HD23 sing N N 375 LEU OXT HXT sing N N 376 LYS N CA sing N N 377 LYS N H sing N N 378 LYS N H2 sing N N 379 LYS CA C sing N N 380 LYS CA CB sing N N 381 LYS CA HA sing N N 382 LYS C O doub N N 383 LYS C OXT sing N N 384 LYS CB CG sing N N 385 LYS CB HB2 sing N N 386 LYS CB HB3 sing N N 387 LYS CG CD sing N N 388 LYS CG HG2 sing N N 389 LYS CG HG3 sing N N 390 LYS CD CE sing N N 391 LYS CD HD2 sing N N 392 LYS CD HD3 sing N N 393 LYS CE NZ sing N N 394 LYS CE HE2 sing N N 395 LYS CE HE3 sing N N 396 LYS NZ HZ1 sing N N 397 LYS NZ HZ2 sing N N 398 LYS NZ HZ3 sing N N 399 LYS OXT HXT sing N N 400 MET N CA sing N N 401 MET N H sing N N 402 MET N H2 sing N N 403 MET CA C sing N N 404 MET CA CB sing N N 405 MET CA HA sing N N 406 MET C O doub N N 407 MET C OXT sing N N 408 MET CB CG sing N N 409 MET CB HB2 sing N N 410 MET CB HB3 sing N N 411 MET CG SD sing N N 412 MET CG HG2 sing N N 413 MET CG HG3 sing N N 414 MET SD CE sing N N 415 MET CE HE1 sing N N 416 MET CE HE2 sing N N 417 MET CE HE3 sing N N 418 MET OXT HXT sing N N 419 PHE N CA sing N N 420 PHE N H sing N N 421 PHE N H2 sing N N 422 PHE CA C sing N N 423 PHE CA CB sing N N 424 PHE CA HA sing N N 425 PHE C O doub N N 426 PHE C OXT sing N N 427 PHE CB CG sing N N 428 PHE CB HB2 sing N N 429 PHE CB HB3 sing N N 430 PHE CG CD1 doub Y N 431 PHE CG CD2 sing Y N 432 PHE CD1 CE1 sing Y N 433 PHE CD1 HD1 sing N N 434 PHE CD2 CE2 doub Y N 435 PHE CD2 HD2 sing N N 436 PHE CE1 CZ doub Y N 437 PHE CE1 HE1 sing N N 438 PHE CE2 CZ sing Y N 439 PHE CE2 HE2 sing N N 440 PHE CZ HZ sing N N 441 PHE OXT HXT sing N N 442 SER N CA sing N N 443 SER N H sing N N 444 SER N H2 sing N N 445 SER CA C sing N N 446 SER CA CB sing N N 447 SER CA HA sing N N 448 SER C O doub N N 449 SER C OXT sing N N 450 SER CB OG sing N N 451 SER CB HB2 sing N N 452 SER CB HB3 sing N N 453 SER OG HG sing N N 454 SER OXT HXT sing N N 455 THR N CA sing N N 456 THR N H sing N N 457 THR N H2 sing N N 458 THR CA C sing N N 459 THR CA CB sing N N 460 THR CA HA sing N N 461 THR C O doub N N 462 THR C OXT sing N N 463 THR CB OG1 sing N N 464 THR CB CG2 sing N N 465 THR CB HB sing N N 466 THR OG1 HG1 sing N N 467 THR CG2 HG21 sing N N 468 THR CG2 HG22 sing N N 469 THR CG2 HG23 sing N N 470 THR OXT HXT sing N N 471 TYR N CA sing N N 472 TYR N H sing N N 473 TYR N H2 sing N N 474 TYR CA C sing N N 475 TYR CA CB sing N N 476 TYR CA HA sing N N 477 TYR C O doub N N 478 TYR C OXT sing N N 479 TYR CB CG sing N N 480 TYR CB HB2 sing N N 481 TYR CB HB3 sing N N 482 TYR CG CD1 doub Y N 483 TYR CG CD2 sing Y N 484 TYR CD1 CE1 sing Y N 485 TYR CD1 HD1 sing N N 486 TYR CD2 CE2 doub Y N 487 TYR CD2 HD2 sing N N 488 TYR CE1 CZ doub Y N 489 TYR CE1 HE1 sing N N 490 TYR CE2 CZ sing Y N 491 TYR CE2 HE2 sing N N 492 TYR CZ OH sing N N 493 TYR OH HH sing N N 494 TYR OXT HXT sing N N 495 VAL N CA sing N N 496 VAL N H sing N N 497 VAL N H2 sing N N 498 VAL CA C sing N N 499 VAL CA CB sing N N 500 VAL CA HA sing N N 501 VAL C O doub N N 502 VAL C OXT sing N N 503 VAL CB CG1 sing N N 504 VAL CB CG2 sing N N 505 VAL CB HB sing N N 506 VAL CG1 HG11 sing N N 507 VAL CG1 HG12 sing N N 508 VAL CG1 HG13 sing N N 509 VAL CG2 HG21 sing N N 510 VAL CG2 HG22 sing N N 511 VAL CG2 HG23 sing N N 512 VAL OXT HXT sing N N 513 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3BS1 'double helix' 3BS1 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 2 1_555 B DA 16 1_555 -0.005 -0.244 0.152 -16.263 -15.058 1.729 1 B_DT2:DA16_C B 2 ? C 16 ? 20 1 1 A DT 3 1_555 B DA 15 1_555 -0.111 -0.156 -0.241 3.376 -2.561 -2.031 2 B_DT3:DA15_C B 3 ? C 15 ? 20 1 1 A DA 4 1_555 B DT 14 1_555 0.143 -0.214 -0.114 6.912 -4.005 0.271 3 B_DA4:DT14_C B 4 ? C 14 ? 20 1 1 A DA 5 1_555 B DT 13 1_555 0.030 -0.134 0.142 2.498 -9.579 0.472 4 B_DA5:DT13_C B 5 ? C 13 ? 20 1 1 A DC 6 1_555 B DG 12 1_555 0.246 -0.132 -0.140 0.528 -6.709 -0.940 5 B_DC6:DG12_C B 6 ? C 12 ? 19 1 1 A DA 7 1_555 B DT 11 1_555 -0.030 -0.062 0.421 20.245 -13.899 7.457 6 B_DA7:DT11_C B 7 ? C 11 ? 20 1 1 A DG 8 1_555 B DC 10 1_555 -0.250 -0.171 0.240 2.129 -22.454 0.562 7 B_DG8:DC10_C B 8 ? C 10 ? 19 1 1 A DT 9 1_555 B DA 9 1_555 -0.123 -0.128 0.287 -17.079 -11.024 -0.530 8 B_DT9:DA9_C B 9 ? C 9 ? 20 1 1 A DT 10 1_555 B DA 8 1_555 0.061 -0.137 0.067 -11.138 -13.487 2.988 9 B_DT10:DA8_C B 10 ? C 8 ? 20 1 1 A DA 11 1_555 B DT 7 1_555 0.023 -0.090 -0.164 -6.109 -7.743 2.479 10 B_DA11:DT7_C B 11 ? C 7 ? 20 1 1 A DA 12 1_555 B DT 6 1_555 0.084 -0.123 0.244 8.063 -10.756 7.706 11 B_DA12:DT6_C B 12 ? C 6 ? 20 1 1 A DG 13 1_555 B DC 5 1_555 -0.360 -0.178 -0.051 -3.920 -13.611 -0.210 12 B_DG13:DC5_C B 13 ? C 5 ? 19 1 1 A BRU 14 1_555 B DA 4 1_555 -0.083 -0.269 0.045 -4.898 -11.073 3.273 13 B_BRU14:DA4_C B 14 ? C 4 ? 20 1 1 A DA 15 1_555 B BRU 3 1_555 -0.114 -0.149 -0.043 -8.648 -13.680 3.305 14 B_DA15:BRU3_C B 15 ? C 3 ? 20 1 1 A DT 16 1_555 B DA 2 1_555 -0.061 -0.144 -0.028 -1.286 -1.928 4.893 15 B_DT16:DA2_C B 16 ? C 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 2 1_555 B DA 16 1_555 A DT 3 1_555 B DA 15 1_555 -0.283 -0.501 2.945 3.519 3.442 29.563 -1.600 1.193 2.818 6.687 -6.837 29.961 1 BB_DT2DT3:DA15DA16_CC B 2 ? C 16 ? B 3 ? C 15 ? 1 A DT 3 1_555 B DA 15 1_555 A DA 4 1_555 B DT 14 1_555 0.242 -0.666 3.310 -0.863 2.601 27.699 -2.010 -0.711 3.226 5.417 1.796 27.831 2 BB_DT3DA4:DT14DA15_CC B 3 ? C 15 ? B 4 ? C 14 ? 1 A DA 4 1_555 B DT 14 1_555 A DA 5 1_555 B DT 13 1_555 -1.369 0.116 3.305 -6.434 0.858 39.473 0.067 1.231 3.478 1.260 9.449 39.982 3 BB_DA4DA5:DT13DT14_CC B 4 ? C 14 ? B 5 ? C 13 ? 1 A DA 5 1_555 B DT 13 1_555 A DC 6 1_555 B DG 12 1_555 0.005 -0.477 3.386 0.850 1.356 31.961 -1.117 0.149 3.363 2.460 -1.542 32.000 4 BB_DA5DC6:DG12DT13_CC B 5 ? C 13 ? B 6 ? C 12 ? 1 A DC 6 1_555 B DG 12 1_555 A DA 7 1_555 B DT 11 1_555 0.721 0.998 2.975 -2.853 13.681 26.539 -0.829 -1.971 3.025 27.509 5.738 29.935 5 BB_DC6DA7:DT11DG12_CC B 6 ? C 12 ? B 7 ? C 11 ? 1 A DA 7 1_555 B DT 11 1_555 A DG 8 1_555 B DC 10 1_555 -0.465 -0.240 3.745 -3.039 5.753 39.828 -1.092 0.282 3.700 8.377 4.425 40.334 6 BB_DA7DG8:DC10DT11_CC B 7 ? C 11 ? B 8 ? C 10 ? 1 A DG 8 1_555 B DC 10 1_555 A DT 9 1_555 B DA 9 1_555 -0.288 -0.804 3.786 0.949 -6.036 37.583 -0.332 0.584 3.857 -9.294 -1.460 38.059 7 BB_DG8DT9:DA9DC10_CC B 8 ? C 10 ? B 9 ? C 9 ? 1 A DT 9 1_555 B DA 9 1_555 A DT 10 1_555 B DA 8 1_555 -0.407 -0.271 3.141 2.417 -1.021 32.715 -0.312 1.117 3.111 -1.808 -4.282 32.817 8 BB_DT9DT10:DA8DA9_CC B 9 ? C 9 ? B 10 ? C 8 ? 1 A DT 10 1_555 B DA 8 1_555 A DA 11 1_555 B DT 7 1_555 -0.169 2.162 3.224 -0.519 -7.124 48.333 3.126 0.167 2.899 -8.646 0.630 48.826 9 BB_DT10DA11:DT7DA8_CC B 10 ? C 8 ? B 11 ? C 7 ? 1 A DA 11 1_555 B DT 7 1_555 A DA 12 1_555 B DT 6 1_555 0.448 0.438 3.070 -5.429 8.349 24.694 -1.126 -2.326 2.899 18.586 12.086 26.597 10 BB_DA11DA12:DT6DT7_CC B 11 ? C 7 ? B 12 ? C 6 ? 1 A DA 12 1_555 B DT 6 1_555 A DG 13 1_555 B DC 5 1_555 -1.392 -0.328 3.396 -5.401 7.178 35.541 -1.567 1.428 3.436 11.533 8.678 36.623 11 BB_DA12DG13:DC5DT6_CC B 12 ? C 6 ? B 13 ? C 5 ? 1 A DG 13 1_555 B DC 5 1_555 A BRU 14 1_555 B DA 4 1_555 -0.174 -0.616 3.315 -2.134 2.777 33.830 -1.499 -0.046 3.260 4.755 3.655 34.005 12 BB_DG13BRU14:DA4DC5_CC B 13 ? C 5 ? B 14 ? C 4 ? 1 A BRU 14 1_555 B DA 4 1_555 A DA 15 1_555 B BRU 3 1_555 0.332 -0.314 3.451 1.165 7.469 37.309 -1.477 -0.355 3.337 11.530 -1.798 38.041 13 BB_BRU14DA15:BRU3DA4_CC B 14 ? C 4 ? B 15 ? C 3 ? 1 A DA 15 1_555 B BRU 3 1_555 A DT 16 1_555 B DA 2 1_555 0.631 -0.319 3.181 1.777 -0.375 29.611 -0.546 -0.866 3.217 -0.733 -3.472 29.666 14 BB_DA15DT16:DA2BRU3_CC B 15 ? C 3 ? B 16 ? C 2 ? # _atom_sites.entry_id 3BS1 _atom_sites.fract_transf_matrix[1][1] 0.020860 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020860 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009989 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O P S # loop_