data_3BSE # _entry.id 3BSE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BSE pdb_00003bse 10.2210/pdb3bse/pdb NDB BD0105 ? ? RCSB RCSB045909 ? ? WWPDB D_1000045909 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.value' 17 3 'Structure model' '_struct_conn.pdbx_dist_value' 18 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BSE _pdbx_database_status.recvd_initial_deposition_date 2007-12-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Narayana, N.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystallographic Analysis of a Sex-Specific Enhancer Element: Sequence-Dependent DNA Structure, Hydration, and Dynamics' J.Mol.Biol. 385 469 490 2009 JMOBAK UK 0022-2836 0070 ? 18992257 10.1016/j.jmb.2008.10.041 1 ;Crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium. Erratum in: J Mol Biol 303, 111 (2000). ; J.Mol.Biol. 301 915 945 2000 JMOBAK UK 0022-2836 0070 ? ? ? 2 'Atomic-resolution crystal structures of B-DNA reveal specific influences of divalent metal ions on conformation and packing' J.Mol.Biol. 291 83 99 1999 JMOBAK UK 0022-2836 0070 ? ? ? 3 'Structure of d(CGCGAATTCGCG) in the presence of Ca2+ ions' J.Biol.Chem. 274 24749 24752 1999 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Narayana, N.' 1 ? primary 'Weiss, M.A.' 2 ? 1 'Chiu, T.K.' 3 ? 1 'Dickerson, R.E.' 4 ? 2 'Minasov, G.' 5 ? 2 'Tereshko, V.' 6 ? 2 'Egli, M.' 7 ? 3 'Liu, J.' 8 ? 3 'Subirana, J.A.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DA*DCP*DAP*DCP*DTP*DAP*DCP*DAP*DAP*DTP*DGP*DTP*DTP*DGP*DCP*DAP*DAP*DT)-3') ; 5483.593 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*DG*DTP*DAP*DTP*DTP*DGP*DCP*DAP*DAP*DCP*DAP*DTP*DTP*DGP*DTP*DAP*DGP*DT)-3') ; 5545.613 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 12 ? ? ? ? 4 water nat water 18.015 197 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DC)(DA)(DC)(DT)(DA)(DC)(DA)(DA)(DT)(DG)(DT)(DT)(DG)(DC)(DA)(DA)(DT)' ACACTACAATGTTGCAAT A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DA)(DT)(DT)(DG)(DC)(DA)(DA)(DC)(DA)(DT)(DT)(DG)(DT)(DA)(DG)(DT)' GTATTGCAACATTGTAGT B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DC n 1 3 DA n 1 4 DC n 1 5 DT n 1 6 DA n 1 7 DC n 1 8 DA n 1 9 DA n 1 10 DT n 1 11 DG n 1 12 DT n 1 13 DT n 1 14 DG n 1 15 DC n 1 16 DA n 1 17 DA n 1 18 DT n 2 1 DG n 2 2 DT n 2 3 DA n 2 4 DT n 2 5 DT n 2 6 DG n 2 7 DC n 2 8 DA n 2 9 DA n 2 10 DC n 2 11 DA n 2 12 DT n 2 13 DT n 2 14 DG n 2 15 DT n 2 16 DA n 2 17 DG n 2 18 DT n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 ? ? ? A . n A 1 2 DC 2 2 2 DC ADE A . n A 1 3 DA 3 3 3 DA ADE A . n A 1 4 DC 4 4 4 DC CYT A . n A 1 5 DT 5 5 5 DT THY A . n A 1 6 DA 6 6 6 DA ADE A . n A 1 7 DC 7 7 7 DC CYT A . n A 1 8 DA 8 8 8 DA ADE A . n A 1 9 DA 9 9 9 DA ADE A . n A 1 10 DT 10 10 10 DT THY A . n A 1 11 DG 11 11 11 DG GUA A . n A 1 12 DT 12 12 12 DT THY A . n A 1 13 DT 13 13 13 DT THY A . n A 1 14 DG 14 14 14 DG GUA A . n A 1 15 DC 15 15 15 DC CYT A . n A 1 16 DA 16 16 16 DA ADE A . n A 1 17 DA 17 17 17 DA ADE A . n A 1 18 DT 18 18 18 DT THY A . n B 2 1 DG 1 19 ? ? ? B . n B 2 2 DT 2 20 20 DT THY B . n B 2 3 DA 3 21 21 DA ADE B . n B 2 4 DT 4 22 22 DT THY B . n B 2 5 DT 5 23 23 DT THY B . n B 2 6 DG 6 24 24 DG GUA B . n B 2 7 DC 7 25 25 DC CYT B . n B 2 8 DA 8 26 26 DA ADE B . n B 2 9 DA 9 27 27 DA ADE B . n B 2 10 DC 10 28 28 DC CYT B . n B 2 11 DA 11 29 29 DA ADE B . n B 2 12 DT 12 30 30 DT THY B . n B 2 13 DT 13 31 31 DT THY B . n B 2 14 DG 14 32 32 DG GUA B . n B 2 15 DT 15 33 33 DT THY B . n B 2 16 DA 16 34 34 DA ADE B . n B 2 17 DG 17 35 35 DG GUA B . n B 2 18 DT 18 36 36 DT THY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 37 37 CA CA2 A . D 3 CA 1 38 38 CA CA2 A . E 3 CA 1 39 39 CA CA2 A . F 3 CA 1 41 41 CA CA2 A . G 3 CA 1 42 42 CA CA2 A . H 3 CA 1 45 45 CA CA2 A . I 3 CA 1 47 47 CA CA2 A . J 3 CA 1 40 40 CA CA2 B . K 3 CA 1 43 43 CA CA2 B . L 3 CA 1 44 44 CA CA2 B . M 3 CA 1 46 46 CA CA2 B . N 3 CA 1 48 48 CA CA2 B . O 4 HOH 1 50 50 HOH WAT A . O 4 HOH 2 52 52 HOH WAT A . O 4 HOH 3 54 54 HOH WAT A . O 4 HOH 4 55 55 HOH WAT A . O 4 HOH 5 58 58 HOH WAT A . O 4 HOH 6 60 60 HOH WAT A . O 4 HOH 7 64 64 HOH WAT A . O 4 HOH 8 65 65 HOH WAT A . O 4 HOH 9 66 66 HOH WAT A . O 4 HOH 10 68 68 HOH WAT A . O 4 HOH 11 69 69 HOH WAT A . O 4 HOH 12 70 70 HOH WAT A . O 4 HOH 13 75 75 HOH WAT A . O 4 HOH 14 78 78 HOH WAT A . O 4 HOH 15 79 79 HOH WAT A . O 4 HOH 16 80 80 HOH WAT A . O 4 HOH 17 81 81 HOH WAT A . O 4 HOH 18 82 82 HOH WAT A . O 4 HOH 19 83 83 HOH WAT A . O 4 HOH 20 86 86 HOH WAT A . O 4 HOH 21 87 87 HOH WAT A . O 4 HOH 22 88 88 HOH WAT A . O 4 HOH 23 95 95 HOH WAT A . O 4 HOH 24 96 96 HOH WAT A . O 4 HOH 25 102 102 HOH WAT A . O 4 HOH 26 103 103 HOH WAT A . O 4 HOH 27 104 104 HOH WAT A . O 4 HOH 28 105 105 HOH WAT A . O 4 HOH 29 106 106 HOH WAT A . O 4 HOH 30 107 107 HOH WAT A . O 4 HOH 31 108 108 HOH WAT A . O 4 HOH 32 109 109 HOH WAT A . O 4 HOH 33 114 114 HOH WAT A . O 4 HOH 34 115 115 HOH WAT A . O 4 HOH 35 117 117 HOH WAT A . O 4 HOH 36 118 118 HOH WAT A . O 4 HOH 37 119 119 HOH WAT A . O 4 HOH 38 120 120 HOH WAT A . O 4 HOH 39 121 121 HOH WAT A . O 4 HOH 40 123 123 HOH WAT A . O 4 HOH 41 127 127 HOH WAT A . O 4 HOH 42 128 128 HOH WAT A . O 4 HOH 43 131 131 HOH WAT A . O 4 HOH 44 133 133 HOH WAT A . O 4 HOH 45 135 135 HOH WAT A . O 4 HOH 46 137 137 HOH WAT A . O 4 HOH 47 140 140 HOH WAT A . O 4 HOH 48 141 141 HOH WAT A . O 4 HOH 49 142 142 HOH WAT A . O 4 HOH 50 144 144 HOH WAT A . O 4 HOH 51 146 146 HOH WAT A . O 4 HOH 52 149 149 HOH WAT A . O 4 HOH 53 151 151 HOH WAT A . O 4 HOH 54 152 152 HOH WAT A . O 4 HOH 55 154 154 HOH WAT A . O 4 HOH 56 155 155 HOH WAT A . O 4 HOH 57 157 157 HOH WAT A . O 4 HOH 58 158 158 HOH WAT A . O 4 HOH 59 159 159 HOH WAT A . O 4 HOH 60 161 161 HOH WAT A . O 4 HOH 61 162 162 HOH WAT A . O 4 HOH 62 164 164 HOH WAT A . O 4 HOH 63 165 165 HOH WAT A . O 4 HOH 64 168 168 HOH WAT A . O 4 HOH 65 169 169 HOH WAT A . O 4 HOH 66 173 173 HOH WAT A . O 4 HOH 67 174 174 HOH WAT A . O 4 HOH 68 177 177 HOH WAT A . O 4 HOH 69 179 179 HOH WAT A . O 4 HOH 70 180 180 HOH WAT A . O 4 HOH 71 181 181 HOH WAT A . O 4 HOH 72 182 182 HOH WAT A . O 4 HOH 73 186 186 HOH WAT A . O 4 HOH 74 187 187 HOH WAT A . O 4 HOH 75 191 191 HOH WAT A . O 4 HOH 76 195 195 HOH WAT A . O 4 HOH 77 197 197 HOH WAT A . O 4 HOH 78 200 200 HOH WAT A . O 4 HOH 79 202 202 HOH WAT A . O 4 HOH 80 203 203 HOH WAT A . O 4 HOH 81 206 206 HOH WAT A . O 4 HOH 82 207 207 HOH WAT A . O 4 HOH 83 208 208 HOH WAT A . O 4 HOH 84 209 209 HOH WAT A . O 4 HOH 85 210 210 HOH WAT A . O 4 HOH 86 211 211 HOH WAT A . O 4 HOH 87 212 212 HOH WAT A . O 4 HOH 88 213 213 HOH WAT A . O 4 HOH 89 215 215 HOH WAT A . O 4 HOH 90 217 217 HOH WAT A . O 4 HOH 91 220 220 HOH WAT A . O 4 HOH 92 225 225 HOH WAT A . O 4 HOH 93 227 227 HOH WAT A . O 4 HOH 94 229 229 HOH WAT A . O 4 HOH 95 230 230 HOH WAT A . O 4 HOH 96 232 232 HOH WAT A . O 4 HOH 97 233 233 HOH WAT A . O 4 HOH 98 234 234 HOH WAT A . O 4 HOH 99 238 238 HOH WAT A . O 4 HOH 100 240 240 HOH WAT A . O 4 HOH 101 242 242 HOH WAT A . O 4 HOH 102 244 244 HOH WAT A . O 4 HOH 103 245 245 HOH WAT A . P 4 HOH 1 49 49 HOH WAT B . P 4 HOH 2 51 51 HOH WAT B . P 4 HOH 3 53 53 HOH WAT B . P 4 HOH 4 56 56 HOH WAT B . P 4 HOH 5 57 57 HOH WAT B . P 4 HOH 6 59 59 HOH WAT B . P 4 HOH 7 61 61 HOH WAT B . P 4 HOH 8 62 62 HOH WAT B . P 4 HOH 9 63 63 HOH WAT B . P 4 HOH 10 67 67 HOH WAT B . P 4 HOH 11 71 71 HOH WAT B . P 4 HOH 12 72 72 HOH WAT B . P 4 HOH 13 73 73 HOH WAT B . P 4 HOH 14 74 74 HOH WAT B . P 4 HOH 15 76 76 HOH WAT B . P 4 HOH 16 77 77 HOH WAT B . P 4 HOH 17 84 84 HOH WAT B . P 4 HOH 18 85 85 HOH WAT B . P 4 HOH 19 89 89 HOH WAT B . P 4 HOH 20 90 90 HOH WAT B . P 4 HOH 21 91 91 HOH WAT B . P 4 HOH 22 92 92 HOH WAT B . P 4 HOH 23 93 93 HOH WAT B . P 4 HOH 24 94 94 HOH WAT B . P 4 HOH 25 97 97 HOH WAT B . P 4 HOH 26 98 98 HOH WAT B . P 4 HOH 27 99 99 HOH WAT B . P 4 HOH 28 100 100 HOH WAT B . P 4 HOH 29 101 101 HOH WAT B . P 4 HOH 30 110 110 HOH WAT B . P 4 HOH 31 111 111 HOH WAT B . P 4 HOH 32 112 112 HOH WAT B . P 4 HOH 33 113 113 HOH WAT B . P 4 HOH 34 116 116 HOH WAT B . P 4 HOH 35 122 122 HOH WAT B . P 4 HOH 36 124 124 HOH WAT B . P 4 HOH 37 125 125 HOH WAT B . P 4 HOH 38 126 126 HOH WAT B . P 4 HOH 39 129 129 HOH WAT B . P 4 HOH 40 130 130 HOH WAT B . P 4 HOH 41 132 132 HOH WAT B . P 4 HOH 42 134 134 HOH WAT B . P 4 HOH 43 136 136 HOH WAT B . P 4 HOH 44 138 138 HOH WAT B . P 4 HOH 45 139 139 HOH WAT B . P 4 HOH 46 143 143 HOH WAT B . P 4 HOH 47 145 145 HOH WAT B . P 4 HOH 48 147 147 HOH WAT B . P 4 HOH 49 148 148 HOH WAT B . P 4 HOH 50 150 150 HOH WAT B . P 4 HOH 51 153 153 HOH WAT B . P 4 HOH 52 156 156 HOH WAT B . P 4 HOH 53 160 160 HOH WAT B . P 4 HOH 54 163 163 HOH WAT B . P 4 HOH 55 166 166 HOH WAT B . P 4 HOH 56 167 167 HOH WAT B . P 4 HOH 57 170 170 HOH WAT B . P 4 HOH 58 171 171 HOH WAT B . P 4 HOH 59 172 172 HOH WAT B . P 4 HOH 60 175 175 HOH WAT B . P 4 HOH 61 176 176 HOH WAT B . P 4 HOH 62 178 178 HOH WAT B . P 4 HOH 63 183 183 HOH WAT B . P 4 HOH 64 184 184 HOH WAT B . P 4 HOH 65 185 185 HOH WAT B . P 4 HOH 66 188 188 HOH WAT B . P 4 HOH 67 189 189 HOH WAT B . P 4 HOH 68 190 190 HOH WAT B . P 4 HOH 69 192 192 HOH WAT B . P 4 HOH 70 193 193 HOH WAT B . P 4 HOH 71 194 194 HOH WAT B . P 4 HOH 72 196 196 HOH WAT B . P 4 HOH 73 198 198 HOH WAT B . P 4 HOH 74 199 199 HOH WAT B . P 4 HOH 75 201 201 HOH WAT B . P 4 HOH 76 204 204 HOH WAT B . P 4 HOH 77 205 205 HOH WAT B . P 4 HOH 78 214 214 HOH WAT B . P 4 HOH 79 216 216 HOH WAT B . P 4 HOH 80 218 218 HOH WAT B . P 4 HOH 81 219 219 HOH WAT B . P 4 HOH 82 221 221 HOH WAT B . P 4 HOH 83 222 222 HOH WAT B . P 4 HOH 84 223 223 HOH WAT B . P 4 HOH 85 224 224 HOH WAT B . P 4 HOH 86 226 226 HOH WAT B . P 4 HOH 87 228 228 HOH WAT B . P 4 HOH 88 231 231 HOH WAT B . P 4 HOH 89 235 235 HOH WAT B . P 4 HOH 90 236 236 HOH WAT B . P 4 HOH 91 237 237 HOH WAT B . P 4 HOH 92 239 239 HOH WAT B . P 4 HOH 93 241 241 HOH WAT B . P 4 HOH 94 243 243 HOH WAT B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DC 2 ? P ? A DC 2 P 2 1 Y 1 A DC 2 ? OP1 ? A DC 2 OP1 3 1 Y 1 A DC 2 ? OP2 ? A DC 2 OP2 4 1 Y 1 A DC 2 ? "O5'" ? A DC 2 "O5'" 5 1 Y 1 A DC 2 ? "C5'" ? A DC 2 "C5'" 6 1 Y 1 A DC 2 ? "C4'" ? A DC 2 "C4'" 7 1 Y 1 A DC 2 ? "O4'" ? A DC 2 "O4'" 8 1 Y 1 A DC 2 ? "C3'" ? A DC 2 "C3'" 9 1 Y 1 A DC 2 ? "C2'" ? A DC 2 "C2'" 10 1 Y 1 A DC 2 ? "C1'" ? A DC 2 "C1'" 11 1 Y 1 A DC 2 ? N1 ? A DC 2 N1 12 1 Y 1 A DC 2 ? C2 ? A DC 2 C2 13 1 Y 1 A DC 2 ? O2 ? A DC 2 O2 14 1 Y 1 A DC 2 ? N3 ? A DC 2 N3 15 1 Y 1 A DC 2 ? C4 ? A DC 2 C4 16 1 Y 1 A DC 2 ? N4 ? A DC 2 N4 17 1 Y 1 A DC 2 ? C5 ? A DC 2 C5 18 1 Y 1 A DC 2 ? C6 ? A DC 2 C6 19 1 Y 1 B DT 20 ? P ? B DT 2 P 20 1 Y 1 B DT 20 ? OP1 ? B DT 2 OP1 21 1 Y 1 B DT 20 ? OP2 ? B DT 2 OP2 22 1 Y 1 B DT 20 ? "O5'" ? B DT 2 "O5'" 23 1 Y 1 B DT 20 ? "C5'" ? B DT 2 "C5'" 24 1 Y 1 B DT 20 ? "C4'" ? B DT 2 "C4'" 25 1 Y 1 B DT 20 ? "O4'" ? B DT 2 "O4'" 26 1 Y 1 B DT 20 ? "C3'" ? B DT 2 "C3'" 27 1 Y 1 B DT 20 ? "C2'" ? B DT 2 "C2'" 28 1 Y 1 B DT 20 ? "C1'" ? B DT 2 "C1'" 29 1 Y 1 B DT 20 ? N1 ? B DT 2 N1 30 1 Y 1 B DT 20 ? C2 ? B DT 2 C2 31 1 Y 1 B DT 20 ? O2 ? B DT 2 O2 32 1 Y 1 B DT 20 ? N3 ? B DT 2 N3 33 1 Y 1 B DT 20 ? C4 ? B DT 2 C4 34 1 Y 1 B DT 20 ? O4 ? B DT 2 O4 35 1 Y 1 B DT 20 ? C5 ? B DT 2 C5 36 1 Y 1 B DT 20 ? C7 ? B DT 2 C7 37 1 Y 1 B DT 20 ? C6 ? B DT 2 C6 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SOLVE phasing . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3BSE _cell.length_a 38.740 _cell.length_b 38.740 _cell.length_c 161.327 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BSE _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3BSE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details ;Hanging drop: 0.25mM DNA duplex, 5mM CaCl2, 0.2M KCl, 5% PEG10K, 5% MPD and 50mM Tris-HCl pH 8.0 Reservoir: 10% PEG10K, 10% MPD and 100mM Bicine pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 CaCl2 ? ? ? 1 2 1 KCl ? ? ? 1 3 1 PEG10K ? ? ? 1 4 1 MPD ? ? ? 1 5 1 Tris-HCl ? ? ? 1 6 2 PEG10K ? ? ? 1 7 2 MPD ? ? ? 1 8 2 Bicine ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-04-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.99 # _reflns.entry_id 3BSE _reflns.observed_criterion_sigma_F 4.0 _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 8.0 _reflns.number_all 11813 _reflns.number_obs 11667 _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.035 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3BSE _refine.ls_d_res_high 1.6 _refine.ls_d_res_low 8.0 _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 11813 _refine.ls_number_reflns_obs 11667 _refine.ls_number_reflns_R_free 1189 _refine.ls_percent_reflns_obs 98.5 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.221 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.274 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Isotropic _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 658 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 197 _refine_hist.number_atoms_total 867 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 8.0 # _database_PDB_matrix.entry_id 3BSE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3BSE _struct.title 'Crystal structure analysis of a 16-base-pair B-DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BSE _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DM domain, DNA structure, Doublesex, Protein-DNA recognition, sex determination, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 4 ? P N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 3BSE 3BSE 1 1 ACACTACAATGTTGCAAT ? 2 PDB 3BSE 3BSE 2 1 GTATTGCAACATTGTAGT ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BSE A 1 ? 18 ? 3BSE 1 ? 18 ? 1 18 2 2 3BSE B 1 ? 18 ? 3BSE 19 ? 36 ? 19 36 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1680 ? 1 MORE -30.2 ? 1 'SSA (A^2)' 6170 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DC 4 OP1 ? ? ? 1_555 H CA . CA ? ? A DC 4 A CA 45 1_555 ? ? ? ? ? ? ? 2.274 ? ? metalc2 metalc ? ? A DA 8 OP1 ? ? ? 1_555 F CA . CA ? ? A DA 8 A CA 41 1_555 ? ? ? ? ? ? ? 2.313 ? ? metalc3 metalc ? ? A DA 8 OP2 ? ? ? 1_555 G CA . CA ? ? A DA 8 A CA 42 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc4 metalc ? ? A DT 18 OP1 ? ? ? 1_555 I CA . CA ? ? A DT 18 A CA 47 1_555 ? ? ? ? ? ? ? 2.313 ? ? metalc5 metalc ? ? C CA . CA ? ? ? 1_555 P HOH . O ? ? A CA 37 B HOH 71 1_555 ? ? ? ? ? ? ? 2.443 ? ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 P HOH . O ? ? A CA 37 B HOH 196 1_555 ? ? ? ? ? ? ? 2.860 ? ? metalc7 metalc ? ? D CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 38 A HOH 86 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc8 metalc ? ? D CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 38 A HOH 195 1_555 ? ? ? ? ? ? ? 2.896 ? ? metalc9 metalc ? ? E CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 39 A HOH 58 1_555 ? ? ? ? ? ? ? 2.572 ? ? metalc10 metalc ? ? E CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 39 A HOH 81 1_555 ? ? ? ? ? ? ? 2.649 ? ? metalc11 metalc ? ? E CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 39 A HOH 131 1_555 ? ? ? ? ? ? ? 2.538 ? ? metalc12 metalc ? ? E CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 39 A HOH 141 1_555 ? ? ? ? ? ? ? 2.847 ? ? metalc13 metalc ? ? E CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 39 A HOH 152 1_555 ? ? ? ? ? ? ? 2.538 ? ? metalc14 metalc ? ? E CA . CA ? ? ? 1_555 P HOH . O ? ? A CA 39 B HOH 72 1_555 ? ? ? ? ? ? ? 2.594 ? ? metalc15 metalc ? ? E CA . CA ? ? ? 1_555 P HOH . O ? ? A CA 39 B HOH 76 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc16 metalc ? ? F CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 41 A HOH 54 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc17 metalc ? ? G CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 42 A HOH 75 1_555 ? ? ? ? ? ? ? 2.525 ? ? metalc18 metalc ? ? H CA . CA ? ? ? 1_555 O HOH . O ? ? A CA 45 A HOH 68 1_555 ? ? ? ? ? ? ? 2.442 ? ? metalc19 metalc ? ? O HOH . O ? ? ? 1_555 J CA . CA ? ? A HOH 66 B CA 40 1_555 ? ? ? ? ? ? ? 2.610 ? ? metalc20 metalc ? ? O HOH . O ? ? ? 1_555 J CA . CA ? ? A HOH 69 B CA 40 1_555 ? ? ? ? ? ? ? 2.544 ? ? metalc21 metalc ? ? B DT 4 OP1 ? ? ? 1_555 N CA . CA ? ? B DT 22 B CA 48 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc22 metalc ? ? B DA 8 OP2 ? ? ? 1_555 K CA . CA ? ? B DA 26 B CA 43 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc23 metalc ? ? B DA 8 OP1 ? ? ? 1_555 L CA . CA ? ? B DA 26 B CA 44 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc24 metalc ? ? B DT 18 OP1 ? ? ? 1_555 M CA . CA ? ? B DT 36 B CA 46 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc25 metalc ? ? J CA . CA ? ? ? 1_555 P HOH . O ? ? B CA 40 B HOH 59 1_555 ? ? ? ? ? ? ? 2.445 ? ? metalc26 metalc ? ? J CA . CA ? ? ? 1_555 P HOH . O ? ? B CA 40 B HOH 74 1_555 ? ? ? ? ? ? ? 2.714 ? ? metalc27 metalc ? ? J CA . CA ? ? ? 1_555 P HOH . O ? ? B CA 40 B HOH 132 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc28 metalc ? ? J CA . CA ? ? ? 1_555 P HOH . O ? ? B CA 40 B HOH 138 1_555 ? ? ? ? ? ? ? 2.421 ? ? metalc29 metalc ? ? K CA . CA ? ? ? 1_555 P HOH . O ? ? B CA 43 B HOH 172 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc30 metalc ? ? L CA . CA ? ? ? 1_555 P HOH . O ? ? B CA 44 B HOH 53 1_555 ? ? ? ? ? ? ? 2.508 ? ? metalc31 metalc ? ? N CA . CA ? ? ? 1_555 P HOH . O ? ? B CA 48 B HOH 73 1_555 ? ? ? ? ? ? ? 2.439 ? ? hydrog1 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 18 N3 ? ? A DA 3 B DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 18 O4 ? ? A DA 3 B DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 17 N1 ? ? A DC 4 B DG 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 17 O6 ? ? A DC 4 B DG 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 17 N2 ? ? A DC 4 B DG 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 16 N1 ? ? A DT 5 B DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 16 N6 ? ? A DT 5 B DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 15 N3 ? ? A DA 6 B DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 15 O4 ? ? A DA 6 B DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 14 N1 ? ? A DC 7 B DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 14 O6 ? ? A DC 7 B DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 14 N2 ? ? A DC 7 B DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 13 N3 ? ? A DA 8 B DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 13 O4 ? ? A DA 8 B DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 12 N3 ? ? A DA 9 B DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 12 O4 ? ? A DA 9 B DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 11 N1 ? ? A DT 10 B DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 11 N6 ? ? A DT 10 B DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 11 B DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 11 B DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 11 B DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 12 B DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 12 B DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 13 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 13 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 14 B DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 14 B DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 14 B DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 15 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 15 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 15 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 15 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 15 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 16 B DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 16 B DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 17 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 17 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DT 18 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 18 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 18 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 18 B DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A DC 4 ? A DC 4 ? 1_555 CA ? H CA . ? A CA 45 ? 1_555 O ? O HOH . ? A HOH 68 ? 1_555 82.6 ? 2 OP1 ? A DA 8 ? A DA 8 ? 1_555 CA ? F CA . ? A CA 41 ? 1_555 O ? O HOH . ? A HOH 54 ? 1_555 98.9 ? 3 OP2 ? A DA 8 ? A DA 8 ? 1_555 CA ? G CA . ? A CA 42 ? 1_555 O ? O HOH . ? A HOH 75 ? 1_555 81.5 ? 4 O ? P HOH . ? B HOH 71 ? 1_555 CA ? C CA . ? A CA 37 ? 1_555 O ? P HOH . ? B HOH 196 ? 1_555 52.9 ? 5 O ? O HOH . ? A HOH 86 ? 1_555 CA ? D CA . ? A CA 38 ? 1_555 O ? O HOH . ? A HOH 195 ? 1_555 58.0 ? 6 O ? O HOH . ? A HOH 58 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 81 ? 1_555 65.4 ? 7 O ? O HOH . ? A HOH 58 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 131 ? 1_555 77.9 ? 8 O ? O HOH . ? A HOH 81 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 131 ? 1_555 143.1 ? 9 O ? O HOH . ? A HOH 58 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 141 ? 1_555 127.2 ? 10 O ? O HOH . ? A HOH 81 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 141 ? 1_555 71.2 ? 11 O ? O HOH . ? A HOH 131 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 141 ? 1_555 136.0 ? 12 O ? O HOH . ? A HOH 58 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 152 ? 1_555 80.1 ? 13 O ? O HOH . ? A HOH 81 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 152 ? 1_555 96.7 ? 14 O ? O HOH . ? A HOH 131 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 152 ? 1_555 73.3 ? 15 O ? O HOH . ? A HOH 141 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? O HOH . ? A HOH 152 ? 1_555 76.6 ? 16 O ? O HOH . ? A HOH 58 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 72 ? 1_555 128.2 ? 17 O ? O HOH . ? A HOH 81 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 72 ? 1_555 75.2 ? 18 O ? O HOH . ? A HOH 131 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 72 ? 1_555 135.1 ? 19 O ? O HOH . ? A HOH 141 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 72 ? 1_555 62.3 ? 20 O ? O HOH . ? A HOH 152 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 72 ? 1_555 138.6 ? 21 O ? O HOH . ? A HOH 58 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 76 ? 1_555 76.3 ? 22 O ? O HOH . ? A HOH 81 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 76 ? 1_555 94.2 ? 23 O ? O HOH . ? A HOH 131 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 76 ? 1_555 79.3 ? 24 O ? O HOH . ? A HOH 141 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 76 ? 1_555 136.4 ? 25 O ? O HOH . ? A HOH 152 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 76 ? 1_555 146.9 ? 26 O ? P HOH . ? B HOH 72 ? 1_555 CA ? E CA . ? A CA 39 ? 1_555 O ? P HOH . ? B HOH 76 ? 1_555 74.4 ? 27 O ? O HOH . ? A HOH 66 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? O HOH . ? A HOH 69 ? 1_555 72.5 ? 28 O ? O HOH . ? A HOH 66 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 59 ? 1_555 121.7 ? 29 O ? O HOH . ? A HOH 69 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 59 ? 1_555 72.5 ? 30 O ? O HOH . ? A HOH 66 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 74 ? 1_555 69.9 ? 31 O ? O HOH . ? A HOH 69 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 74 ? 1_555 95.6 ? 32 O ? P HOH . ? B HOH 59 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 74 ? 1_555 68.8 ? 33 O ? O HOH . ? A HOH 66 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 132 ? 1_555 138.5 ? 34 O ? O HOH . ? A HOH 69 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 132 ? 1_555 81.9 ? 35 O ? P HOH . ? B HOH 59 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 132 ? 1_555 78.6 ? 36 O ? P HOH . ? B HOH 74 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 132 ? 1_555 146.3 ? 37 O ? O HOH . ? A HOH 66 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 138 ? 1_555 138.1 ? 38 O ? O HOH . ? A HOH 69 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 138 ? 1_555 149.3 ? 39 O ? P HOH . ? B HOH 59 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 138 ? 1_555 87.5 ? 40 O ? P HOH . ? B HOH 74 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 138 ? 1_555 98.6 ? 41 O ? P HOH . ? B HOH 132 ? 1_555 CA ? J CA . ? B CA 40 ? 1_555 O ? P HOH . ? B HOH 138 ? 1_555 71.2 ? 42 OP1 ? B DT 4 ? B DT 22 ? 1_555 CA ? N CA . ? B CA 48 ? 1_555 O ? P HOH . ? B HOH 73 ? 1_555 86.3 ? 43 OP2 ? B DA 8 ? B DA 26 ? 1_555 CA ? K CA . ? B CA 43 ? 1_555 O ? P HOH . ? B HOH 172 ? 1_555 84.6 ? 44 OP1 ? B DA 8 ? B DA 26 ? 1_555 CA ? L CA . ? B CA 44 ? 1_555 O ? P HOH . ? B HOH 53 ? 1_555 101.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 37 ? 1 'BINDING SITE FOR RESIDUE CA A 37' AC2 Software A CA 38 ? 1 'BINDING SITE FOR RESIDUE CA A 38' AC5 Software A CA 41 ? 1 'BINDING SITE FOR RESIDUE CA A 41' AC6 Software A CA 42 ? 1 'BINDING SITE FOR RESIDUE CA A 42' AC7 Software B CA 43 ? 1 'BINDING SITE FOR RESIDUE CA B 43' AC8 Software B CA 44 ? 1 'BINDING SITE FOR RESIDUE CA B 44' AC9 Software A CA 45 ? 1 'BINDING SITE FOR RESIDUE CA A 45' BC1 Software B CA 46 ? 1 'BINDING SITE FOR RESIDUE CA B 46' BC2 Software A CA 47 ? 1 'BINDING SITE FOR RESIDUE CA A 47' BC3 Software B CA 48 ? 1 'BINDING SITE FOR RESIDUE CA B 48' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 DA A 17 ? DA A 17 . ? 1_555 ? 2 AC2 1 DG B 17 ? DG B 35 . ? 1_555 ? 3 AC5 1 DA A 8 ? DA A 8 . ? 1_555 ? 4 AC6 1 DA A 8 ? DA A 8 . ? 1_555 ? 5 AC7 1 DA B 8 ? DA B 26 . ? 1_555 ? 6 AC8 1 DA B 8 ? DA B 26 . ? 1_555 ? 7 AC9 1 DC A 4 ? DC A 4 . ? 1_555 ? 8 BC1 1 DT B 18 ? DT B 36 . ? 1_555 ? 9 BC2 1 DT A 18 ? DT A 18 . ? 1_555 ? 10 BC3 1 DT B 4 ? DT B 22 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DC 2 ? ? P A DA 3 ? ? 1.481 1.607 -0.126 0.012 Y 2 1 P A DA 3 ? ? OP1 A DA 3 ? ? 1.608 1.485 0.123 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A DC 2 ? ? P A DA 3 ? ? OP2 A DA 3 ? ? 119.39 110.50 8.89 1.10 Y 2 1 OP1 A DA 3 ? ? P A DA 3 ? ? OP2 A DA 3 ? ? 108.10 119.60 -11.50 1.50 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 3 ? ? 0.061 'SIDE CHAIN' 2 1 DG B 32 ? ? 0.083 'SIDE CHAIN' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CA 41 ? F CA . 2 1 A CA 42 ? G CA . 3 1 A CA 45 ? H CA . 4 1 A CA 47 ? I CA . 5 1 B CA 43 ? K CA . 6 1 B CA 44 ? L CA . 7 1 B CA 46 ? M CA . 8 1 B CA 48 ? N CA . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A DA 1 ? A DA 1 2 1 Y 1 B DG 19 ? B DG 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CA CA CA N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 3BSE _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 3 1_555 B DT 18 1_555 0.036 -0.034 -0.010 4.200 -7.145 3.477 1 A_DA3:DT36_B A 3 ? B 36 ? 20 1 1 A DC 4 1_555 B DG 17 1_555 0.186 0.009 0.068 -1.999 -14.079 -0.081 2 A_DC4:DG35_B A 4 ? B 35 ? 19 1 1 A DT 5 1_555 B DA 16 1_555 0.066 -0.015 -0.115 2.071 -19.815 2.291 3 A_DT5:DA34_B A 5 ? B 34 ? 20 1 1 A DA 6 1_555 B DT 15 1_555 -0.195 -0.016 -0.269 -5.371 -7.127 -1.766 4 A_DA6:DT33_B A 6 ? B 33 ? 20 1 1 A DC 7 1_555 B DG 14 1_555 0.440 -0.045 -0.083 6.848 -2.839 2.181 5 A_DC7:DG32_B A 7 ? B 32 ? 19 1 1 A DA 8 1_555 B DT 13 1_555 -0.097 -0.152 0.080 12.801 -15.699 2.672 6 A_DA8:DT31_B A 8 ? B 31 ? 20 1 1 A DA 9 1_555 B DT 12 1_555 -0.040 -0.088 0.106 9.226 -15.582 1.403 7 A_DA9:DT30_B A 9 ? B 30 ? 20 1 1 A DT 10 1_555 B DA 11 1_555 0.068 -0.007 -0.072 7.405 -15.796 4.172 8 A_DT10:DA29_B A 10 ? B 29 ? 20 1 1 A DG 11 1_555 B DC 10 1_555 -0.349 -0.076 -0.073 -12.641 -13.745 3.618 9 A_DG11:DC28_B A 11 ? B 28 ? 19 1 1 A DT 12 1_555 B DA 9 1_555 -0.079 -0.002 0.210 -14.405 -16.220 2.038 10 A_DT12:DA27_B A 12 ? B 27 ? 20 1 1 A DT 13 1_555 B DA 8 1_555 -0.044 -0.104 0.265 -15.090 -12.495 4.087 11 A_DT13:DA26_B A 13 ? B 26 ? 20 1 1 A DG 14 1_555 B DC 7 1_555 -0.375 -0.056 -0.019 -8.864 -4.024 1.374 12 A_DG14:DC25_B A 14 ? B 25 ? 19 1 1 A DC 15 1_555 B DG 6 1_555 0.219 -0.010 0.001 5.461 -3.751 0.441 13 A_DC15:DG24_B A 15 ? B 24 ? 19 1 1 A DA 16 1_555 B DT 5 1_555 0.052 -0.069 0.099 2.846 -15.989 1.246 14 A_DA16:DT23_B A 16 ? B 23 ? 20 1 1 A DA 17 1_555 B DT 4 1_555 -0.022 -0.008 0.004 -1.163 -12.623 -1.287 15 A_DA17:DT22_B A 17 ? B 22 ? 20 1 1 A DT 18 1_555 B DA 3 1_555 -0.031 -0.082 0.058 -1.961 -7.824 2.659 16 A_DT18:DA21_B A 18 ? B 21 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 3 1_555 B DT 18 1_555 A DC 4 1_555 B DG 17 1_555 -0.556 -0.715 3.409 -1.895 5.157 28.216 -2.632 0.683 3.259 10.453 3.841 28.735 1 AA_DA3DC4:DG35DT36_BB A 3 ? B 36 ? A 4 ? B 35 ? 1 A DC 4 1_555 B DG 17 1_555 A DT 5 1_555 B DA 16 1_555 -0.480 -0.316 3.207 1.504 0.657 29.312 -0.760 1.262 3.172 1.296 -2.969 29.357 2 AA_DC4DT5:DA34DG35_BB A 4 ? B 35 ? A 5 ? B 34 ? 1 A DT 5 1_555 B DA 16 1_555 A DA 6 1_555 B DT 15 1_555 0.429 1.189 3.527 3.203 4.229 41.521 1.178 -0.231 3.648 5.935 -4.495 41.844 3 AA_DT5DA6:DT33DA34_BB A 5 ? B 34 ? A 6 ? B 33 ? 1 A DA 6 1_555 B DT 15 1_555 A DC 7 1_555 B DG 14 1_555 0.494 -0.165 3.088 0.146 4.559 21.775 -2.042 -1.230 2.993 11.901 -0.382 22.242 4 AA_DA6DC7:DG32DT33_BB A 6 ? B 33 ? A 7 ? B 32 ? 1 A DC 7 1_555 B DG 14 1_555 A DA 8 1_555 B DT 13 1_555 -0.062 2.168 3.261 2.614 -3.654 47.872 2.941 0.276 3.090 -4.491 -3.213 48.070 5 AA_DC7DA8:DT31DG32_BB A 7 ? B 32 ? A 8 ? B 31 ? 1 A DA 8 1_555 B DT 13 1_555 A DA 9 1_555 B DT 12 1_555 0.042 0.081 3.378 -1.487 3.577 31.905 -0.515 -0.351 3.362 6.478 2.693 32.133 6 AA_DA8DA9:DT30DT31_BB A 8 ? B 31 ? A 9 ? B 30 ? 1 A DA 9 1_555 B DT 12 1_555 A DT 10 1_555 B DA 11 1_555 0.420 -0.695 3.318 0.672 -1.518 32.303 -0.973 -0.633 3.354 -2.726 -1.207 32.345 7 AA_DA9DT10:DA29DT30_BB A 9 ? B 30 ? A 10 ? B 29 ? 1 A DT 10 1_555 B DA 11 1_555 A DG 11 1_555 B DC 10 1_555 0.125 -0.477 3.623 -0.280 8.453 37.620 -1.868 -0.228 3.440 12.909 0.428 38.525 8 AA_DT10DG11:DC28DA29_BB A 10 ? B 29 ? A 11 ? B 28 ? 1 A DG 11 1_555 B DC 10 1_555 A DT 12 1_555 B DA 9 1_555 -0.480 -0.658 3.313 -0.922 -0.905 32.969 -1.003 0.687 3.342 -1.594 1.625 32.993 9 AA_DG11DT12:DA27DC28_BB A 11 ? B 28 ? A 12 ? B 27 ? 1 A DT 12 1_555 B DA 9 1_555 A DT 13 1_555 B DA 8 1_555 -0.022 0.080 3.343 0.671 2.634 31.708 -0.345 0.165 3.338 4.809 -1.225 31.821 10 AA_DT12DT13:DA26DA27_BB A 12 ? B 27 ? A 13 ? B 26 ? 1 A DT 13 1_555 B DA 8 1_555 A DG 14 1_555 B DC 7 1_555 -0.010 2.150 3.209 -2.021 -6.003 49.153 2.985 -0.129 2.942 -7.182 2.418 49.534 11 AA_DT13DG14:DC25DA26_BB A 13 ? B 26 ? A 14 ? B 25 ? 1 A DG 14 1_555 B DC 7 1_555 A DC 15 1_555 B DG 6 1_555 -0.267 -0.230 3.042 -0.788 4.656 21.503 -2.256 0.421 2.934 12.288 2.078 22.009 12 AA_DG14DC15:DG24DC25_BB A 14 ? B 25 ? A 15 ? B 24 ? 1 A DC 15 1_555 B DG 6 1_555 A DA 16 1_555 B DT 5 1_555 -0.495 1.064 3.402 -2.185 1.749 41.982 1.293 0.452 3.462 2.438 3.046 42.071 13 AA_DC15DA16:DT23DG24_BB A 15 ? B 24 ? A 16 ? B 23 ? 1 A DA 16 1_555 B DT 5 1_555 A DA 17 1_555 B DT 4 1_555 0.436 -0.451 3.429 0.422 3.539 29.487 -1.654 -0.759 3.358 6.921 -0.825 29.696 14 AA_DA16DA17:DT22DT23_BB A 16 ? B 23 ? A 17 ? B 22 ? 1 A DA 17 1_555 B DT 4 1_555 A DT 18 1_555 B DA 3 1_555 0.549 -0.778 3.298 0.723 3.016 27.853 -2.318 -0.962 3.211 6.242 -1.495 28.022 15 AA_DA17DT18:DA21DT22_BB A 17 ? B 22 ? A 18 ? B 21 ? # _atom_sites.entry_id 3BSE _atom_sites.fract_transf_matrix[1][1] 0.025813 _atom_sites.fract_transf_matrix[1][2] 0.014902 _atom_sites.fract_transf_matrix[1][3] -0.000001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029806 _atom_sites.fract_transf_matrix[2][3] -0.000001 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006199 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P # loop_